Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:54:52 (459450): wrapper (7.7.26015): starting
16:54:52 (459450): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 16:54:52] Arguments: --nthreads 8
[2025-06-05 16:54:52] Threads: 8
[2025-06-05 16:54:52] Checking for CVMFS
[2025-06-05 16:54:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 16:54:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 16:54:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 16:54:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 16:54:53] 2.12.6.0 7995 3284 190968 146831 3 575 31539768 32935937 20581 16776704 0 23577912 99.920 3412459 27732 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 16:54:53] CVMFS is ok
[2025-06-05 16:54:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 16:54:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 16:54:53] Further information can be found at the LHC@home message board.
[2025-06-05 16:54:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 16:54:53] Checking for apptainer binary...
[2025-06-05 16:54:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 16:54:53] Running /usr/bin/apptainer --version
[2025-06-05 16:54:53] apptainer version 1.4.1-1.el9
[2025-06-05 16:54:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 16:54:54] c6-8-25-2.aglt2.org
[2025-06-05 16:54:54] apptainer works
[2025-06-05 16:54:54] Set ATHENA_PROC_NUMBER=8
[2025-06-05 16:54:54] Set ATHENA_CORE_NUMBER=8
[2025-06-05 16:54:54] Starting ATLAS job with PandaID=6667201129
[2025-06-05 16:54:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 19:20:50]  *** The last 200 lines of the pilot log: ***
[2025-06-05 19:20:50] 2025-06-05 23:20:28,729 | INFO     | monitor loop #611: job 0:6667201129 is in state 'finished'
[2025-06-05 19:20:50] 2025-06-05 23:20:28,729 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 19:20:50] 2025-06-05 23:20:29,176 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 19:20:50] 2025-06-05 23:20:29,187 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2737.325989583334
[2025-06-05 19:20:50] 2025-06-05 23:20:29,202 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667201129/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 19:20:50] 2025-06-05 23:20:29,203 | INFO     | extracted standard info from prmon json
[2025-06-05 19:20:50] 2025-06-05 23:20:29,203 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 19:20:50] 2025-06-05 23:20:29,203 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 19:20:50] 2025-06-05 23:20:29,203 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 19:20:50] 2025-06-05 23:20:29,203 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 19:20:50] 2025-06-05 23:20:29,206 | INFO     | fitting pss+swap vs Time
[2025-06-05 19:20:50] 2025-06-05 23:20:29,206 | INFO     | sum of square deviations: 869174362.9361715
[2025-06-05 19:20:50] 2025-06-05 23:20:29,207 | INFO     | sum of deviations: -1090449211.7872326
[2025-06-05 19:20:50] 2025-06-05 23:20:29,207 | INFO     | mean x: 1749161305.0212767
[2025-06-05 19:20:50] 2025-06-05 23:20:29,207 | INFO     | mean y: 2190905.929078014
[2025-06-05 19:20:50] 2025-06-05 23:20:29,207 | INFO     | -- intersect: 2196654580.5200505
[2025-06-05 19:20:50] 2025-06-05 23:20:29,207 | INFO     | intersect: 2196654580.5200505
[2025-06-05 19:20:50] 2025-06-05 23:20:29,208 | INFO     | chi2: 1.7352893113052283
[2025-06-05 19:20:50] 2025-06-05 23:20:29,208 | INFO     | sum of square deviations: 779945697.9338263
[2025-06-05 19:20:50] 2025-06-05 23:20:29,209 | INFO     | sum of deviations: 155873220.1102931
[2025-06-05 19:20:50] 2025-06-05 23:20:29,209 | INFO     | mean x: 1749161152.5220587
[2025-06-05 19:20:50] 2025-06-05 23:20:29,209 | INFO     | mean y: 2192984.463235294
[2025-06-05 19:20:50] 2025-06-05 23:20:29,209 | INFO     | -- intersect: -347379276.85921544
[2025-06-05 19:20:50] 2025-06-05 23:20:29,209 | INFO     | intersect: -347379276.85921544
[2025-06-05 19:20:50] 2025-06-05 23:20:29,209 | INFO     | chi2: 1.7256550475928607
[2025-06-05 19:20:50] 2025-06-05 23:20:29,209 | INFO     | current chi2=1.7256550475928607 (change=0.555196395759567 %)
[2025-06-05 19:20:50] 2025-06-05 23:20:29,209 | INFO     | right removable region: 135
[2025-06-05 19:20:50] 2025-06-05 23:20:29,209 | INFO     | sum of square deviations: 779943867.9338263
[2025-06-05 19:20:50] 2025-06-05 23:20:29,210 | INFO     | sum of deviations: -19421143279.830894
[2025-06-05 19:20:50] 2025-06-05 23:20:29,210 | INFO     | mean x: 1749161457.5220587
[2025-06-05 19:20:50] 2025-06-05 23:20:29,210 | INFO     | mean y: 2221730.1102941176
[2025-06-05 19:20:50] 2025-06-05 23:20:29,210 | INFO     | -- intersect: 43557555239.02886
[2025-06-05 19:20:50] 2025-06-05 23:20:29,210 | INFO     | intersect: 43557555239.02886
[2025-06-05 19:20:50] 2025-06-05 23:20:29,211 | INFO     | chi2: 0.279879901236082
[2025-06-05 19:20:50] 2025-06-05 23:20:29,211 | INFO     | current chi2=0.279879901236082 (change=83.8712830527628 %)
[2025-06-05 19:20:50] 2025-06-05 23:20:29,211 | INFO     | sum of square deviations: 697039072.9312986
[2025-06-05 19:20:50] 2025-06-05 23:20:29,211 | INFO     | sum of deviations: -13036609878.114504
[2025-06-05 19:20:50] 2025-06-05 23:20:29,211 | INFO     | mean x: 1749161610.0229008
[2025-06-05 19:20:50] 2025-06-05 23:20:29,212 | INFO     | mean y: 2209947.038167939
[2025-06-05 19:20:50] 2025-06-05 23:20:29,212 | INFO     | -- intersect: 32716498728.22208
[2025-06-05 19:20:50] 2025-06-05 23:20:29,212 | INFO     | intersect: 32716498728.22208
[2025-06-05 19:20:50] 2025-06-05 23:20:29,212 | INFO     | chi2: 0.2330594704105054
[2025-06-05 19:20:50] 2025-06-05 23:20:29,212 | INFO     | current chi2=0.2330594704105054 (change=16.728757806043028 %)
[2025-06-05 19:20:50] 2025-06-05 23:20:29,212 | INFO     | left removable region: 20
[2025-06-05 19:20:50] 2025-06-05 23:20:29,212 | INFO     | sum of square deviations: 471560988.99130464
[2025-06-05 19:20:50] 2025-06-05 23:20:29,213 | INFO     | sum of deviations: -886621452.8086956
[2025-06-05 19:20:50] 2025-06-05 23:20:29,213 | INFO     | mean x: 1749161732.0086956
[2025-06-05 19:20:50] 2025-06-05 23:20:29,213 | INFO     | mean y: 2189064.808695652
[2025-06-05 19:20:50] 2025-06-05 23:20:29,213 | INFO     | -- intersect: 3290935064.23555
[2025-06-05 19:20:50] 2025-06-05 23:20:29,213 | INFO     | intersect: 3290935064.23555
[2025-06-05 19:20:50] 2025-06-05 23:20:29,213 | INFO     | chi2: 0.03199230194472333
[2025-06-05 19:20:50] 2025-06-05 23:20:29,213 | INFO     | -- intersect: 3290935064.23555
[2025-06-05 19:20:50] 2025-06-05 23:20:29,213 | INFO     | current memory leak: -1.88 B/s (using 115 data points, chi2=0.03)
[2025-06-05 19:20:50] 2025-06-05 23:20:29,214 | INFO     | could have reported an average CPU frequency of 2631 MHz (8 samples)
[2025-06-05 19:20:50] 2025-06-05 23:20:29,214 | INFO     | ..............................
[2025-06-05 19:20:50] 2025-06-05 23:20:29,214 | INFO     | . Timing measurements:
[2025-06-05 19:20:50] 2025-06-05 23:20:29,214 | INFO     | . get job = 0 s
[2025-06-05 19:20:50] 2025-06-05 23:20:29,214 | INFO     | . initial setup = 4 s
[2025-06-05 19:20:50] 2025-06-05 23:20:29,214 | INFO     | . payload setup = 30 s
[2025-06-05 19:20:50] 2025-06-05 23:20:29,214 | INFO     | . stage-in = 0 s
[2025-06-05 19:20:50] 2025-06-05 23:20:29,214 | INFO     | . payload execution = 8605 s
[2025-06-05 19:20:50] 2025-06-05 23:20:29,214 | INFO     | . stage-out = 0 s
[2025-06-05 19:20:50] 2025-06-05 23:20:29,214 | INFO     | . log creation = 0 s
[2025-06-05 19:20:50] 2025-06-05 23:20:29,214 | INFO     | ..............................
[2025-06-05 19:20:50] 2025-06-05 23:20:29,306 | INFO     | 
[2025-06-05 19:20:50] 2025-06-05 23:20:29,307 | INFO     | job summary report
[2025-06-05 19:20:50] 2025-06-05 23:20:29,307 | INFO     | --------------------------------------------------
[2025-06-05 19:20:50] 2025-06-05 23:20:29,307 | INFO     | PanDA job id: 6667201129
[2025-06-05 19:20:50] 2025-06-05 23:20:29,307 | INFO     | task id: 44871837
[2025-06-05 19:20:50] 2025-06-05 23:20:29,307 | INFO     | errors: (none)
[2025-06-05 19:20:50] 2025-06-05 23:20:29,307 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 19:20:50] 2025-06-05 23:20:29,307 | INFO     | pilot state: finished 
[2025-06-05 19:20:50] 2025-06-05 23:20:29,307 | INFO     | transexitcode: 0
[2025-06-05 19:20:50] 2025-06-05 23:20:29,307 | INFO     | exeerrorcode: 0
[2025-06-05 19:20:50] 2025-06-05 23:20:29,307 | INFO     | exeerrordiag: 
[2025-06-05 19:20:50] 2025-06-05 23:20:29,307 | INFO     | exitcode: 0
[2025-06-05 19:20:50] 2025-06-05 23:20:29,308 | INFO     | exitmsg: OK
[2025-06-05 19:20:50] 2025-06-05 23:20:29,308 | INFO     | cpuconsumptiontime: 53608 s
[2025-06-05 19:20:50] 2025-06-05 23:20:29,308 | INFO     | nevents: 400
[2025-06-05 19:20:50] 2025-06-05 23:20:29,308 | INFO     | neventsw: 0
[2025-06-05 19:20:50] 2025-06-05 23:20:29,308 | INFO     | pid: 470748
[2025-06-05 19:20:50] 2025-06-05 23:20:29,308 | INFO     | pgrp: 470748
[2025-06-05 19:20:50] 2025-06-05 23:20:29,308 | INFO     | corecount: 8
[2025-06-05 19:20:50] 2025-06-05 23:20:29,308 | INFO     | event service: False
[2025-06-05 19:20:50] 2025-06-05 23:20:29,308 | INFO     | sizes: {0: 2397511, 1: 2397710, 2: 2397710, 12: 2397738, 22: 2398028, 23: 2398056, 8639: 2426307, 8642: 2435248, 8643: 2435304, 8649: 2435498}
[2025-06-05 19:20:50] 2025-06-05 23:20:29,308 | INFO     | --------------------------------------------------
[2025-06-05 19:20:50] 2025-06-05 23:20:29,308 | INFO     | 
[2025-06-05 19:20:50] 2025-06-05 23:20:29,308 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 19:20:50] 2025-06-05 23:20:29,327 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 19:20:50] 2025-06-05 23:20:29,327 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 19:20:50] 2025-06-05 23:20:29,327 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 19:20:50] 2025-06-05 23:20:29,327 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 19:20:50] 2025-06-05 23:20:29,327 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 19:20:50] 2025-06-05 23:20:29,327 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 19:20:50] 2025-06-05 23:20:29,327 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 19:20:50] 2025-06-05 23:20:29,328 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 19:20:50] 2025-06-05 23:20:29,328 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 19:20:50] 2025-06-05 23:20:29,328 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 19:20:50] 2025-06-05 23:20:29,328 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 19:20:50] 2025-06-05 23:20:29,328 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 19:20:50] 2025-06-05 23:20:29,328 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 19:20:50] 2025-06-05 23:20:29,328 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 19:20:50] 2025-06-05 23:20:29,328 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 19:20:50] 2025-06-05 23:20:29,328 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 19:20:50] 2025-06-05 23:20:29,328 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 19:20:50] 2025-06-05 23:20:29,328 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 19:20:50] 2025-06-05 23:20:29,328 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 19:20:50] 2025-06-05 23:20:29,328 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 19:20:50] 2025-06-05 23:20:29,329 | INFO     | job 6667201129 has completed (purged errors)
[2025-06-05 19:20:50] 2025-06-05 23:20:29,329 | INFO     | overall cleanup function is called
[2025-06-05 19:20:50] 2025-06-05 23:20:30,336 | INFO     | --- collectZombieJob: --- 10, [470748]
[2025-06-05 19:20:50] 2025-06-05 23:20:30,337 | INFO     | zombie collector waiting for pid 470748
[2025-06-05 19:20:50] 2025-06-05 23:20:30,337 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 19:20:50] 2025-06-05 23:20:30,337 | INFO     | collected zombie processes
[2025-06-05 19:20:50] 2025-06-05 23:20:30,337 | INFO     | will attempt to kill all subprocesses of pid=470748
[2025-06-05 19:20:50] 2025-06-05 23:20:30,752 | INFO     | PID=463749 has CPU usage=14.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 19:20:50] 2025-06-05 23:20:30,753 | INFO     | .. there are 13 such processes running
[2025-06-05 19:20:50] 2025-06-05 23:20:30,898 | INFO     | process IDs to be killed: [470748] (in reverse order)
[2025-06-05 19:20:50] 2025-06-05 23:20:31,009 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 19:20:50] 2025-06-05 23:20:31,010 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 19:20:50] 2025-06-05 23:20:31,027 | INFO     | did not find any defunct processes belonging to 470748
[2025-06-05 19:20:50] 2025-06-05 23:20:31,045 | INFO     | did not find any defunct processes belonging to 470748
[2025-06-05 19:20:50] 2025-06-05 23:20:31,045 | INFO     | ready for new job
[2025-06-05 19:20:50] 2025-06-05 23:20:31,046 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 19:20:50] 2025-06-05 23:20:31,048 | INFO     | ***************************************
[2025-06-05 19:20:50] 2025-06-05 23:20:31,048 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-05 19:20:50] 2025-06-05 23:20:31,048 | INFO     | ***************************************
[2025-06-05 19:20:50] 2025-06-05 23:20:31,048 | INFO     | 
[2025-06-05 19:20:50] 2025-06-05 23:20:31,066 | INFO     | architecture information:
[2025-06-05 19:20:50] 2025-06-05 23:20:31,067 | INFO     | executing command: cat /etc/os-release
[2025-06-05 19:20:50] 2025-06-05 23:20:31,084 | INFO     | cat /etc/os-release:
[2025-06-05 19:20:50] NAME="CentOS Linux"
[2025-06-05 19:20:50] VERSION="7 (Core)"
[2025-06-05 19:20:50] ID="centos"
[2025-06-05 19:20:50] ID_LIKE="rhel fedora"
[2025-06-05 19:20:50] VERSION_ID="7"
[2025-06-05 19:20:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 19:20:50] ANSI_COLOR="0;31"
[2025-06-05 19:20:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 19:20:50] HOME_URL="https://www.centos.org/"
[2025-06-05 19:20:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 19:20:50] 
[2025-06-05 19:20:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 19:20:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 19:20:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 19:20:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 19:20:50] 
[2025-06-05 19:20:50] 2025-06-05 23:20:31,084 | INFO     | ***************************************
[2025-06-05 19:20:50] 2025-06-05 23:20:31,587 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 19:20:50] 2025-06-05 23:20:31,601 | INFO     | sufficient remaining disk space (76607913984 B)
[2025-06-05 19:20:50] 2025-06-05 23:20:31,601 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 19:20:50] 2025-06-05 23:20:31,601 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 19:20:50] 2025-06-05 23:20:31,601 | INFO     | update_server=False
[2025-06-05 19:20:50] 2025-06-05 23:20:31,601 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 19:20:50] 2025-06-05 23:20:31,602 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 19:20:50] 2025-06-05 23:20:31,602 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 19:20:50] 2025-06-05 23:20:31,602 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 19:20:50] 2025-06-05 23:20:31,602 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 19:20:50] 2025-06-05 23:20:31,651 | INFO     | all payload control threads have been joined
[2025-06-05 19:20:50] 2025-06-05 23:20:31,998 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 19:20:50] 2025-06-05 23:20:32,237 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 19:20:50] 2025-06-05 23:20:32,237 | INFO     | aborting loop
[2025-06-05 19:20:50] 2025-06-05 23:20:32,544 | INFO     | all data control threads have been joined
[2025-06-05 19:20:50] 2025-06-05 23:20:32,606 | INFO     | [job] retrieve thread has finished
[2025-06-05 19:20:50] 2025-06-05 23:20:32,657 | INFO     | [payload] control thread has finished
[2025-06-05 19:20:50] 2025-06-05 23:20:32,855 | INFO     | all job control threads have been joined
[2025-06-05 19:20:50] 2025-06-05 23:20:32,887 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 19:20:50] 2025-06-05 23:20:33,003 | INFO     | [job] validate thread has finished
[2025-06-05 19:20:50] 2025-06-05 23:20:33,146 | INFO     | [payload] validate_post thread has finished
[2025-06-05 19:20:50] 2025-06-05 23:20:33,239 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 19:20:50] 2025-06-05 23:20:33,242 | INFO     | [job] job monitor thread has finished
[2025-06-05 19:20:50] 2025-06-05 23:20:33,291 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 19:20:50] 2025-06-05 23:20:33,549 | INFO     | [data] control thread has finished
[2025-06-05 19:20:50] 2025-06-05 23:20:33,569 | INFO     | [payload] failed_post thread has finished
[2025-06-05 19:20:50] 2025-06-05 23:20:33,790 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 19:20:50] 2025-06-05 23:20:33,861 | INFO     | [job] control thread has finished
[2025-06-05 19:20:50] 2025-06-05 23:20:34,003 | INFO     | [data] copytool_out thread has finished
[2025-06-05 19:20:50] 2025-06-05 23:20:34,103 | INFO     | [data] copytool_in thread has finished
[2025-06-05 19:20:50] 2025-06-05 23:20:34,326 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 19:20:50] 2025-06-05 23:20:35,331 | INFO     | [job] queue monitor thread has finished
[2025-06-05 19:20:50] 2025-06-05 23:20:36,893 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 19:20:50] 2025-06-05 23:20:41,828 | INFO     | job.realtimelogging is not enabled
[2025-06-05 19:20:50] 2025-06-05 23:20:42,833 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 19:20:50] 2025-06-05 23:20:44,806 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140464960726848)>', '<ExcThread(monitor, started 140464481101568)>']
[2025-06-05 19:20:50] 2025-06-05 23:20:45,671 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 19:20:50] 2025-06-05 23:20:45,672 | INFO     | [monitor] control thread has ended
[2025-06-05 19:20:50] 2025-06-05 23:20:49,831 | INFO     | all workflow threads have been joined
[2025-06-05 19:20:50] 2025-06-05 23:20:49,831 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 19:20:50] 2025-06-05 23:20:49,831 | INFO     | traces error code: 0
[2025-06-05 19:20:50] 2025-06-05 23:20:49,831 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 19:20:50] 2025-06-05 23:20:50,001 [wrapper] ==== pilot stdout END ====
[2025-06-05 19:20:50] 2025-06-05 23:20:50,003 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 19:20:50] 2025-06-05 23:20:50,006 [wrapper] pilotpid: 463749
[2025-06-05 19:20:50] 2025-06-05 23:20:50,008 [wrapper] Pilot exit status: 0
[2025-06-05 19:20:50] 2025-06-05 23:20:50,016 [wrapper] pandaids: 6667201129
[2025-06-05 19:20:50] 2025-06-05 23:20:50,063 [wrapper] cleanup supervisor_pilot  707479 463750
[2025-06-05 19:20:50] 2025-06-05 23:20:50,066 [wrapper] Test setup, not cleaning
[2025-06-05 19:20:50] 2025-06-05 23:20:50,067 [wrapper] apfmon messages muted
[2025-06-05 19:20:50] 2025-06-05 23:20:50,070 [wrapper] ==== wrapper stdout END ====
[2025-06-05 19:20:50] 2025-06-05 23:20:50,072 [wrapper] ==== wrapper stderr END ====
[2025-06-05 19:20:50]  *** Error codes and diagnostics ***
[2025-06-05 19:20:50]     "exeErrorCode": 0,
[2025-06-05 19:20:50]     "exeErrorDiag": "",
[2025-06-05 19:20:50]     "pilotErrorCode": 0,
[2025-06-05 19:20:50]     "pilotErrorDiag": "",
[2025-06-05 19:20:50]  *** Listing of results directory ***
[2025-06-05 19:20:50] total 425040
[2025-06-05 19:20:50] -rwx------. 1 boincer umatlas     37140 Jun  5 16:54 runpilot2-wrapper.sh
[2025-06-05 19:20:50] -rw-r--r--. 1 boincer umatlas    529402 Jun  5 16:54 pilot3.tar.gz
[2025-06-05 19:20:50] -rw-r--r--. 1 boincer umatlas      5112 Jun  5 16:54 queuedata.json
[2025-06-05 19:20:50] -rw-r--r--. 1 boincer umatlas       100 Jun  5 16:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 19:20:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 16:54 run_atlas
[2025-06-05 19:20:50] -rw-r--r--. 1 boincer umatlas       105 Jun  5 16:54 job.xml
[2025-06-05 19:20:50] -rw-r--r--. 2 boincer umatlas 226653649 Jun  5 16:54 EVNT.44871834._002722.pool.root.1
[2025-06-05 19:20:50] -rw-r--r--. 2 boincer umatlas     15095 Jun  5 16:54 start_atlas.sh
[2025-06-05 19:20:50] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 16:54 shared
[2025-06-05 19:20:50] -rw-r--r--. 2 boincer umatlas    541902 Jun  5 16:54 input.tar.gz
[2025-06-05 19:20:50] -rw-r--r--. 1 boincer umatlas         0 Jun  5 16:54 boinc_lockfile
[2025-06-05 19:20:50] -rw-r--r--. 1 boincer umatlas      2558 Jun  5 16:54 pandaJob.out
[2025-06-05 19:20:50] -rw-------. 1 boincer umatlas    987599 Jun  5 16:55 agis_schedconf.cvmfs.json
[2025-06-05 19:20:50] -rw-------. 1 boincer umatlas   1598969 Jun  5 16:55 agis_ddmendpoints.agis.ALL.json
[2025-06-05 19:20:50] drwx------. 4 boincer umatlas      4096 Jun  5 16:55 pilot3
[2025-06-05 19:20:50] -rw-r--r--. 1 boincer umatlas      6852 Jun  5 19:19 init_data.xml
[2025-06-05 19:20:50] -rw-------. 1 boincer umatlas 202391568 Jun  5 19:19 HITS.44871837._069250.pool.root.1
[2025-06-05 19:20:50] -rw-r--r--. 1 boincer umatlas       529 Jun  5 19:19 boinc_task_state.xml
[2025-06-05 19:20:50] -rw-------. 1 boincer umatlas        95 Jun  5 19:19 pilot_heartbeat.json
[2025-06-05 19:20:50] -rw-------. 1 boincer umatlas      1041 Jun  5 19:20 memory_monitor_summary.json
[2025-06-05 19:20:50] -rw-------. 1 boincer umatlas    358891 Jun  5 19:20 log.44871837._069250.job.log.tgz.1
[2025-06-05 19:20:50] -rw-------. 1 boincer umatlas      7757 Jun  5 19:20 heartbeat.json
[2025-06-05 19:20:50] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 19:20 boinc_mmap_file
[2025-06-05 19:20:50] -rw-r--r--. 1 boincer umatlas        27 Jun  5 19:20 wrapper_checkpoint.txt
[2025-06-05 19:20:50] -rw-------. 1 boincer umatlas      4552 Jun  5 19:20 pilotlog.txt
[2025-06-05 19:20:50] -rw-------. 1 boincer umatlas    790579 Jun  5 19:20 log.44871837._069250.job.log.1
[2025-06-05 19:20:50] -rw-------. 1 boincer umatlas       357 Jun  5 19:20 output.list
[2025-06-05 19:20:50] -rw-r--r--. 1 boincer umatlas       620 Jun  5 19:20 runtime_log
[2025-06-05 19:20:50] -rw-------. 1 boincer umatlas   1167360 Jun  5 19:20 result.tar.gz
[2025-06-05 19:20:50] -rw-------. 1 boincer umatlas       654 Jun  5 19:20 tZeMDmdmWh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmC6nKDmoyrUgn.diag
[2025-06-05 19:20:50] -rw-r--r--. 1 boincer umatlas      8665 Jun  5 19:20 runtime_log.err
[2025-06-05 19:20:50] -rw-r--r--. 1 boincer umatlas     21231 Jun  5 19:20 stderr.txt
[2025-06-05 19:20:50] HITS file was successfully produced:
[2025-06-05 19:20:50] -rw-------. 1 boincer umatlas 202391568 Jun  5 19:19 shared/HITS.pool.root.1
[2025-06-05 19:20:50]  *** Contents of shared directory: ***
[2025-06-05 19:20:50] total 420684
[2025-06-05 19:20:50] -rw-r--r--. 2 boincer umatlas 226653649 Jun  5 16:54 ATLAS.root_0
[2025-06-05 19:20:50] -rw-r--r--. 2 boincer umatlas     15095 Jun  5 16:54 start_atlas.sh
[2025-06-05 19:20:50] -rw-r--r--. 2 boincer umatlas    541902 Jun  5 16:54 input.tar.gz
[2025-06-05 19:20:50] -rw-------. 1 boincer umatlas 202391568 Jun  5 19:19 HITS.pool.root.1
[2025-06-05 19:20:50] -rw-------. 1 boincer umatlas   1167360 Jun  5 19:20 result.tar.gz
19:21:12 (459450): run_atlas exited; CPU time 53877.796367
19:21:12 (459450): called boinc_finish(0)

</stderr_txt>
]]>

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