Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:54:42 (37011): wrapper (7.7.26015): starting
16:54:42 (37011): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 16:54:42] Arguments: --nthreads 8
[2025-06-05 16:54:42] Threads: 8
[2025-06-05 16:54:42] Checking for CVMFS
[2025-06-05 16:54:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 16:54:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 16:54:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 16:54:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 16:54:42] 2.11.2.0 73730 12931 318228 146831 2 348 16877074 18432000 15466 130560 0 100720391 99.448 116813542 72679 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 16:54:42] CVMFS is ok
[2025-06-05 16:54:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 16:54:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 16:54:42] Further information can be found at the LHC@home message board.
[2025-06-05 16:54:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 16:54:42] Checking for apptainer binary...
[2025-06-05 16:54:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 16:54:42] Running /usr/bin/apptainer --version
[2025-06-05 16:54:42] apptainer version 1.3.2-1.el7
[2025-06-05 16:54:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 16:54:43] c-212-10.aglt2.org
[2025-06-05 16:54:43] apptainer works
[2025-06-05 16:54:43] Set ATHENA_PROC_NUMBER=8
[2025-06-05 16:54:43] Set ATHENA_CORE_NUMBER=8
[2025-06-05 16:54:43] Starting ATLAS job with PandaID=6668686894
[2025-06-05 16:54:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 18:39:53]  *** The last 200 lines of the pilot log: ***
[2025-06-05 18:39:53] 2025-06-05 22:39:35,739 | INFO     | executing command: lscpu
[2025-06-05 18:39:53] 2025-06-05 22:39:35,786 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 18:39:53] 2025-06-05 22:39:35,998 | INFO     | monitor loop #469: job 0:6668686894 is in state 'finished'
[2025-06-05 18:39:53] 2025-06-05 22:39:35,998 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 18:39:53] 2025-06-05 22:39:38,501 | INFO     | monitor loop #470: job 0:6668686894 is in state 'finished'
[2025-06-05 18:39:53] 2025-06-05 22:39:38,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 18:39:53] 2025-06-05 22:39:40,286 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 18:39:53] 2025-06-05 22:39:40,286 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668686894/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 18:39:53] 2025-06-05 22:39:40,287 | INFO     | extracted standard info from prmon json
[2025-06-05 18:39:53] 2025-06-05 22:39:40,287 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 18:39:53] 2025-06-05 22:39:40,287 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 18:39:53] 2025-06-05 22:39:40,288 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 18:39:53] 2025-06-05 22:39:40,288 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 18:39:53] 2025-06-05 22:39:40,290 | INFO     | fitting pss+swap vs Time
[2025-06-05 18:39:53] 2025-06-05 22:39:40,290 | INFO     | sum of square deviations: 338804492.0
[2025-06-05 18:39:53] 2025-06-05 22:39:40,291 | INFO     | sum of deviations: 3077034773.0
[2025-06-05 18:39:53] 2025-06-05 22:39:40,291 | INFO     | mean x: 1749160028.0
[2025-06-05 18:39:53] 2025-06-05 22:39:40,291 | INFO     | mean y: 2506066.1844660193
[2025-06-05 18:39:53] 2025-06-05 22:39:40,291 | INFO     | -- intersect: -15883429205.58771
[2025-06-05 18:39:53] 2025-06-05 22:39:40,291 | INFO     | intersect: -15883429205.58771
[2025-06-05 18:39:53] 2025-06-05 22:39:40,291 | INFO     | chi2: 1.3346890188261598
[2025-06-05 18:39:53] 2025-06-05 22:39:40,291 | INFO     | sum of square deviations: 291817564.5
[2025-06-05 18:39:53] 2025-06-05 22:39:40,292 | INFO     | sum of deviations: 3001596591.500001
[2025-06-05 18:39:53] 2025-06-05 22:39:40,292 | INFO     | mean x: 1749159875.5
[2025-06-05 18:39:53] 2025-06-05 22:39:40,292 | INFO     | mean y: 2505822.9081632653
[2025-06-05 18:39:53] 2025-06-05 22:39:40,292 | INFO     | -- intersect: -17989119627.34593
[2025-06-05 18:39:53] 2025-06-05 22:39:40,292 | INFO     | intersect: -17989119627.34593
[2025-06-05 18:39:53] 2025-06-05 22:39:40,292 | INFO     | chi2: 1.3365868510082217
[2025-06-05 18:39:53] 2025-06-05 22:39:40,292 | INFO     | current chi2=1.3365868510082217 (change=-0.14219283707983765 %)
[2025-06-05 18:39:53] 2025-06-05 22:39:40,292 | INFO     | right removable region: 97
[2025-06-05 18:39:53] 2025-06-05 22:39:40,292 | INFO     | sum of square deviations: 291817564.5
[2025-06-05 18:39:53] 2025-06-05 22:39:40,293 | INFO     | sum of deviations: -9489115348.0
[2025-06-05 18:39:53] 2025-06-05 22:39:40,293 | INFO     | mean x: 1749160180.5
[2025-06-05 18:39:53] 2025-06-05 22:39:40,293 | INFO     | mean y: 2545766.6938775512
[2025-06-05 18:39:53] 2025-06-05 22:39:40,293 | INFO     | -- intersect: 56880488474.947136
[2025-06-05 18:39:53] 2025-06-05 22:39:40,293 | INFO     | intersect: 56880488474.947136
[2025-06-05 18:39:53] 2025-06-05 22:39:40,293 | INFO     | chi2: 0.09105726498434719
[2025-06-05 18:39:53] 2025-06-05 22:39:40,293 | INFO     | current chi2=0.09105726498434719 (change=93.17764185514686 %)
[2025-06-05 18:39:53] 2025-06-05 22:39:40,293 | INFO     | sum of square deviations: 249388862.0
[2025-06-05 18:39:53] 2025-06-05 22:39:40,294 | INFO     | sum of deviations: -7602082056.0
[2025-06-05 18:39:53] 2025-06-05 22:39:40,294 | INFO     | mean x: 1749160333.0
[2025-06-05 18:39:53] 2025-06-05 22:39:40,294 | INFO     | mean y: 2538829.7204301073
[2025-06-05 18:39:53] 2025-06-05 22:39:40,294 | INFO     | -- intersect: 53321922357.62748
[2025-06-05 18:39:53] 2025-06-05 22:39:40,294 | INFO     | intersect: 53321922357.62748
[2025-06-05 18:39:53] 2025-06-05 22:39:40,294 | INFO     | chi2: 0.07851500981589235
[2025-06-05 18:39:53] 2025-06-05 22:39:40,294 | INFO     | current chi2=0.07851500981589235 (change=13.774030189256022 %)
[2025-06-05 18:39:53] 2025-06-05 22:39:40,294 | INFO     | left removable region: 20
[2025-06-05 18:39:53] 2025-06-05 22:39:40,294 | INFO     | sum of square deviations: 141539398.0
[2025-06-05 18:39:53] 2025-06-05 22:39:40,295 | INFO     | sum of deviations: -1057167819.9999998
[2025-06-05 18:39:53] 2025-06-05 22:39:40,295 | INFO     | mean x: 1749160455.0
[2025-06-05 18:39:53] 2025-06-05 22:39:40,295 | INFO     | mean y: 2511019.324675325
[2025-06-05 18:39:53] 2025-06-05 22:39:40,295 | INFO     | -- intersect: 13067114735.122292
[2025-06-05 18:39:53] 2025-06-05 22:39:40,295 | INFO     | intersect: 13067114735.122292
[2025-06-05 18:39:53] 2025-06-05 22:39:40,295 | INFO     | chi2: 0.023805447521837535
[2025-06-05 18:39:53] 2025-06-05 22:39:40,295 | INFO     | -- intersect: 13067114735.122292
[2025-06-05 18:39:53] 2025-06-05 22:39:40,295 | INFO     | current memory leak: -7.47 B/s (using 77 data points, chi2=0.02)
[2025-06-05 18:39:53] 2025-06-05 22:39:40,296 | INFO     | ..............................
[2025-06-05 18:39:53] 2025-06-05 22:39:40,296 | INFO     | . Timing measurements:
[2025-06-05 18:39:53] 2025-06-05 22:39:40,296 | INFO     | . get job = 0 s
[2025-06-05 18:39:53] 2025-06-05 22:39:40,296 | INFO     | . initial setup = 2 s
[2025-06-05 18:39:53] 2025-06-05 22:39:40,296 | INFO     | . payload setup = 5 s
[2025-06-05 18:39:53] 2025-06-05 22:39:40,296 | INFO     | . stage-in = 0 s
[2025-06-05 18:39:53] 2025-06-05 22:39:40,296 | INFO     | . payload execution = 6255 s
[2025-06-05 18:39:53] 2025-06-05 22:39:40,296 | INFO     | . stage-out = 0 s
[2025-06-05 18:39:53] 2025-06-05 22:39:40,296 | INFO     | . log creation = 0 s
[2025-06-05 18:39:53] 2025-06-05 22:39:40,296 | INFO     | ..............................
[2025-06-05 18:39:53] 2025-06-05 22:39:40,372 | INFO     | 
[2025-06-05 18:39:53] 2025-06-05 22:39:40,373 | INFO     | job summary report
[2025-06-05 18:39:53] 2025-06-05 22:39:40,373 | INFO     | --------------------------------------------------
[2025-06-05 18:39:53] 2025-06-05 22:39:40,373 | INFO     | PanDA job id: 6668686894
[2025-06-05 18:39:53] 2025-06-05 22:39:40,373 | INFO     | task id: 44871837
[2025-06-05 18:39:53] 2025-06-05 22:39:40,373 | INFO     | errors: (none)
[2025-06-05 18:39:53] 2025-06-05 22:39:40,373 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 18:39:53] 2025-06-05 22:39:40,373 | INFO     | pilot state: finished 
[2025-06-05 18:39:53] 2025-06-05 22:39:40,373 | INFO     | transexitcode: 0
[2025-06-05 18:39:53] 2025-06-05 22:39:40,373 | INFO     | exeerrorcode: 0
[2025-06-05 18:39:53] 2025-06-05 22:39:40,373 | INFO     | exeerrordiag: 
[2025-06-05 18:39:53] 2025-06-05 22:39:40,373 | INFO     | exitcode: 0
[2025-06-05 18:39:53] 2025-06-05 22:39:40,373 | INFO     | exitmsg: OK
[2025-06-05 18:39:53] 2025-06-05 22:39:40,374 | INFO     | cpuconsumptiontime: 41049 s
[2025-06-05 18:39:53] 2025-06-05 22:39:40,374 | INFO     | nevents: 400
[2025-06-05 18:39:53] 2025-06-05 22:39:40,374 | INFO     | neventsw: 0
[2025-06-05 18:39:53] 2025-06-05 22:39:40,374 | INFO     | pid: 48433
[2025-06-05 18:39:53] 2025-06-05 22:39:40,374 | INFO     | pgrp: 48433
[2025-06-05 18:39:53] 2025-06-05 22:39:40,374 | INFO     | corecount: 8
[2025-06-05 18:39:53] 2025-06-05 22:39:40,374 | INFO     | event service: False
[2025-06-05 18:39:53] 2025-06-05 22:39:40,374 | INFO     | sizes: {0: 2397341, 3: 2397547, 11: 2397575, 6265: 2424430, 6266: 2433371, 6269: 2433427, 6274: 2433725}
[2025-06-05 18:39:53] 2025-06-05 22:39:40,374 | INFO     | --------------------------------------------------
[2025-06-05 18:39:53] 2025-06-05 22:39:40,374 | INFO     | 
[2025-06-05 18:39:53] 2025-06-05 22:39:40,374 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 18:39:53] 2025-06-05 22:39:40,392 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 18:39:53] 2025-06-05 22:39:40,393 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 18:39:53] 2025-06-05 22:39:40,393 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 18:39:53] 2025-06-05 22:39:40,393 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 18:39:53] 2025-06-05 22:39:40,393 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 18:39:53] 2025-06-05 22:39:40,393 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 18:39:53] 2025-06-05 22:39:40,393 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 18:39:53] 2025-06-05 22:39:40,393 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 18:39:53] 2025-06-05 22:39:40,393 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 18:39:53] 2025-06-05 22:39:40,393 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 18:39:53] 2025-06-05 22:39:40,393 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 18:39:53] 2025-06-05 22:39:40,393 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 18:39:53] 2025-06-05 22:39:40,393 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 18:39:53] 2025-06-05 22:39:40,393 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 18:39:53] 2025-06-05 22:39:40,394 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 18:39:53] 2025-06-05 22:39:40,394 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 18:39:53] 2025-06-05 22:39:40,394 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 18:39:53] 2025-06-05 22:39:40,394 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 18:39:53] 2025-06-05 22:39:40,394 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 18:39:53] 2025-06-05 22:39:40,394 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 18:39:53] 2025-06-05 22:39:40,394 | INFO     | job 6668686894 has completed (purged errors)
[2025-06-05 18:39:53] 2025-06-05 22:39:40,394 | INFO     | overall cleanup function is called
[2025-06-05 18:39:53] 2025-06-05 22:39:41,402 | INFO     | --- collectZombieJob: --- 10, [48433]
[2025-06-05 18:39:53] 2025-06-05 22:39:41,402 | INFO     | zombie collector waiting for pid 48433
[2025-06-05 18:39:53] 2025-06-05 22:39:41,402 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 18:39:53] 2025-06-05 22:39:41,402 | INFO     | collected zombie processes
[2025-06-05 18:39:53] 2025-06-05 22:39:41,402 | INFO     | will attempt to kill all subprocesses of pid=48433
[2025-06-05 18:39:53] 2025-06-05 22:39:41,601 | INFO     | process IDs to be killed: [48433] (in reverse order)
[2025-06-05 18:39:53] 2025-06-05 22:39:41,677 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 18:39:53] 2025-06-05 22:39:41,678 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 18:39:53] 2025-06-05 22:39:41,685 | INFO     | did not find any defunct processes belonging to 48433
[2025-06-05 18:39:53] 2025-06-05 22:39:41,694 | INFO     | did not find any defunct processes belonging to 48433
[2025-06-05 18:39:53] 2025-06-05 22:39:41,695 | INFO     | ready for new job
[2025-06-05 18:39:53] 2025-06-05 22:39:41,695 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 18:39:53] 2025-06-05 22:39:41,697 | INFO     | **************************************
[2025-06-05 18:39:53] 2025-06-05 22:39:41,697 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 18:39:53] 2025-06-05 22:39:41,697 | INFO     | **************************************
[2025-06-05 18:39:53] 2025-06-05 22:39:41,697 | INFO     | 
[2025-06-05 18:39:53] 2025-06-05 22:39:41,701 | INFO     | architecture information:
[2025-06-05 18:39:53] 2025-06-05 22:39:41,702 | INFO     | executing command: cat /etc/os-release
[2025-06-05 18:39:53] 2025-06-05 22:39:41,716 | INFO     | cat /etc/os-release:
[2025-06-05 18:39:53] NAME="CentOS Linux"
[2025-06-05 18:39:53] VERSION="7 (Core)"
[2025-06-05 18:39:53] ID="centos"
[2025-06-05 18:39:53] ID_LIKE="rhel fedora"
[2025-06-05 18:39:53] VERSION_ID="7"
[2025-06-05 18:39:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 18:39:53] ANSI_COLOR="0;31"
[2025-06-05 18:39:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 18:39:53] HOME_URL="https://www.centos.org/"
[2025-06-05 18:39:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 18:39:53] 
[2025-06-05 18:39:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 18:39:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 18:39:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 18:39:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 18:39:53] 
[2025-06-05 18:39:53] 2025-06-05 22:39:41,716 | INFO     | **************************************
[2025-06-05 18:39:53] 2025-06-05 22:39:42,220 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 18:39:53] 2025-06-05 22:39:42,236 | INFO     | sufficient remaining disk space (106665345024 B)
[2025-06-05 18:39:53] 2025-06-05 22:39:42,237 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 18:39:53] 2025-06-05 22:39:42,237 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 18:39:53] 2025-06-05 22:39:42,237 | INFO     | update_server=False
[2025-06-05 18:39:53] 2025-06-05 22:39:42,237 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 18:39:53] 2025-06-05 22:39:42,237 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:39:53] 2025-06-05 22:39:42,238 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 18:39:53] 2025-06-05 22:39:42,238 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 18:39:53] 2025-06-05 22:39:42,238 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:39:53] 2025-06-05 22:39:42,238 | INFO     | aborting loop
[2025-06-05 18:39:53] 2025-06-05 22:39:42,239 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 18:39:53] 2025-06-05 22:39:42,240 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 18:39:53] 2025-06-05 22:39:42,240 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 18:39:53] 2025-06-05 22:39:42,347 | INFO     | all data control threads have been joined
[2025-06-05 18:39:53] 2025-06-05 22:39:42,471 | INFO     | all payload control threads have been joined
[2025-06-05 18:39:53] 2025-06-05 22:39:43,243 | INFO     | [job] retrieve thread has finished
[2025-06-05 18:39:53] 2025-06-05 22:39:43,244 | INFO     | [job] job monitor thread has finished
[2025-06-05 18:39:53] 2025-06-05 22:39:43,245 | INFO     | [job] queue monitor thread has finished
[2025-06-05 18:39:53] 2025-06-05 22:39:43,252 | INFO     | all job control threads have been joined
[2025-06-05 18:39:53] 2025-06-05 22:39:43,311 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 18:39:53] 2025-06-05 22:39:43,350 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 18:39:53] 2025-06-05 22:39:43,353 | INFO     | [data] control thread has finished
[2025-06-05 18:39:53] 2025-06-05 22:39:43,477 | INFO     | [payload] control thread has finished
[2025-06-05 18:39:53] 2025-06-05 22:39:43,619 | INFO     | [payload] failed_post thread has finished
[2025-06-05 18:39:53] 2025-06-05 22:39:43,855 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 18:39:53] 2025-06-05 22:39:44,082 | INFO     | [payload] validate_post thread has finished
[2025-06-05 18:39:53] 2025-06-05 22:39:44,200 | INFO     | [job] validate thread has finished
[2025-06-05 18:39:53] 2025-06-05 22:39:44,201 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 18:39:53] 2025-06-05 22:39:44,221 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 18:39:53] 2025-06-05 22:39:44,258 | INFO     | [job] control thread has finished
[2025-06-05 18:39:53] 2025-06-05 22:39:44,686 | INFO     | [data] copytool_in thread has finished
[2025-06-05 18:39:53] 2025-06-05 22:39:45,317 | INFO     | [data] copytool_out thread has finished
[2025-06-05 18:39:53] 2025-06-05 22:39:46,244 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 18:39:53] 2025-06-05 22:39:47,469 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140211655481152)>', '<ExcThread(monitor, started 140211069638400)>']
[2025-06-05 18:39:53] 2025-06-05 22:39:48,276 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 18:39:53] 2025-06-05 22:39:48,276 | INFO     | [monitor] control thread has ended
[2025-06-05 18:39:53] 2025-06-05 22:39:50,054 [wrapper] supervise_pilot (15 min periods counter: 8)
[2025-06-05 18:39:53] 2025-06-05 22:39:52,469 | INFO     | all workflow threads have been joined
[2025-06-05 18:39:53] 2025-06-05 22:39:52,470 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 18:39:53] 2025-06-05 22:39:52,470 | INFO     | traces error code: 0
[2025-06-05 18:39:53] 2025-06-05 22:39:52,471 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 18:39:53] 2025-06-05 22:39:52,603 [wrapper] ==== pilot stdout END ====
[2025-06-05 18:39:53] 2025-06-05 22:39:52,641 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 18:39:53] 2025-06-05 22:39:52,679 [wrapper] pilotpid: 40714
[2025-06-05 18:39:53] 2025-06-05 22:39:52,714 [wrapper] Pilot exit status: 0
[2025-06-05 18:39:53] 2025-06-05 22:39:52,937 [wrapper] pandaids: 6668686894
[2025-06-05 18:39:53] 2025-06-05 22:39:52,995 [wrapper] cleanup supervisor_pilot  8043 40715
[2025-06-05 18:39:53] 2025-06-05 22:39:52,998 [wrapper] Test setup, not cleaning
[2025-06-05 18:39:53] 2025-06-05 22:39:53,000 [wrapper] apfmon messages muted
[2025-06-05 18:39:53] 2025-06-05 22:39:53,002 [wrapper] ==== wrapper stdout END ====
[2025-06-05 18:39:53] 2025-06-05 22:39:53,004 [wrapper] ==== wrapper stderr END ====
[2025-06-05 18:39:53]  *** Error codes and diagnostics ***
[2025-06-05 18:39:53]     "exeErrorCode": 0,
[2025-06-05 18:39:53]     "exeErrorDiag": "",
[2025-06-05 18:39:53]     "pilotErrorCode": 0,
[2025-06-05 18:39:53]     "pilotErrorDiag": "",
[2025-06-05 18:39:53]  *** Listing of results directory ***
[2025-06-05 18:39:53] total 416092
[2025-06-05 18:39:53] -rw-r--r-- 1 boincer umatlas    495897 May 28 11:15 pilot3.tar.gz
[2025-06-05 18:39:53] -rw-r--r-- 1 boincer umatlas      5111 May 28 11:23 queuedata.json
[2025-06-05 18:39:53] -rwx------ 1 boincer umatlas     37140 May 28 11:25 runpilot2-wrapper.sh
[2025-06-05 18:39:53] -rw-r--r-- 1 boincer umatlas       100 Jun  5 16:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 18:39:53] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 16:54 run_atlas
[2025-06-05 18:39:53] -rw-r--r-- 1 boincer umatlas       105 Jun  5 16:54 job.xml
[2025-06-05 18:39:53] -rw-r--r-- 2 boincer umatlas 226131841 Jun  5 16:54 EVNT.44871834._001560.pool.root.1
[2025-06-05 18:39:53] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 16:54 start_atlas.sh
[2025-06-05 18:39:53] drwxrwx--x 2 boincer umatlas      4096 Jun  5 16:54 shared
[2025-06-05 18:39:53] -rw-r--r-- 2 boincer umatlas    508884 Jun  5 16:54 input.tar.gz
[2025-06-05 18:39:53] -rw-r--r-- 1 boincer umatlas         0 Jun  5 16:54 boinc_lockfile
[2025-06-05 18:39:53] -rw-r--r-- 1 boincer umatlas      2558 Jun  5 16:54 pandaJob.out
[2025-06-05 18:39:53] -rw------- 1 boincer umatlas    987599 Jun  5 16:54 agis_schedconf.cvmfs.json
[2025-06-05 18:39:53] -rw------- 1 boincer umatlas   1598969 Jun  5 16:54 agis_ddmendpoints.agis.ALL.json
[2025-06-05 18:39:53] drwx------ 4 boincer umatlas      4096 Jun  5 16:54 pilot3
[2025-06-05 18:39:53] -rw-r--r-- 1 boincer umatlas      6388 Jun  5 18:29 init_data.xml
[2025-06-05 18:39:53] -rw-r--r-- 1 boincer umatlas       530 Jun  5 18:39 boinc_task_state.xml
[2025-06-05 18:39:53] -rw------- 1 boincer umatlas 194246825 Jun  5 18:39 HITS.44871837._086287.pool.root.1
[2025-06-05 18:39:53] -rw------- 1 boincer umatlas      1082 Jun  5 18:39 memory_monitor_summary.json
[2025-06-05 18:39:53] -rw------- 1 boincer umatlas        95 Jun  5 18:39 pilot_heartbeat.json
[2025-06-05 18:39:53] -rw------- 1 boincer umatlas    323721 Jun  5 18:39 log.44871837._086287.job.log.tgz.1
[2025-06-05 18:39:53] -rw------- 1 boincer umatlas      7753 Jun  5 18:39 heartbeat.json
[2025-06-05 18:39:53] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 18:39 boinc_mmap_file
[2025-06-05 18:39:53] -rw-r--r-- 1 boincer umatlas        27 Jun  5 18:39 wrapper_checkpoint.txt
[2025-06-05 18:39:53] -rw------- 1 boincer umatlas      4477 Jun  5 18:39 pilotlog.txt
[2025-06-05 18:39:53] -rw------- 1 boincer umatlas    606735 Jun  5 18:39 log.44871837._086287.job.log.1
[2025-06-05 18:39:53] -rw------- 1 boincer umatlas       357 Jun  5 18:39 output.list
[2025-06-05 18:39:53] -rw-r--r-- 1 boincer umatlas       620 Jun  5 18:39 runtime_log
[2025-06-05 18:39:53] -rw------- 1 boincer umatlas    952320 Jun  5 18:39 result.tar.gz
[2025-06-05 18:39:53] -rw-r--r-- 1 boincer umatlas      8659 Jun  5 18:39 runtime_log.err
[2025-06-05 18:39:53] -rw------- 1 boincer umatlas       660 Jun  5 18:39 9sWMDmapXe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsQcKDmdumqdn.diag
[2025-06-05 18:39:53] -rw-r--r-- 1 boincer umatlas     21099 Jun  5 18:39 stderr.txt
[2025-06-05 18:39:53] HITS file was successfully produced:
[2025-06-05 18:39:53] -rw------- 1 boincer umatlas 194246825 Jun  5 18:39 shared/HITS.pool.root.1
[2025-06-05 18:39:53]  *** Contents of shared directory: ***
[2025-06-05 18:39:53] total 411980
[2025-06-05 18:39:53] -rw-r--r-- 2 boincer umatlas 226131841 Jun  5 16:54 ATLAS.root_0
[2025-06-05 18:39:53] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 16:54 start_atlas.sh
[2025-06-05 18:39:53] -rw-r--r-- 2 boincer umatlas    508884 Jun  5 16:54 input.tar.gz
[2025-06-05 18:39:53] -rw------- 1 boincer umatlas 194246825 Jun  5 18:39 HITS.pool.root.1
[2025-06-05 18:39:53] -rw------- 1 boincer umatlas    952320 Jun  5 18:39 result.tar.gz
18:39:55 (37011): run_atlas exited; CPU time 40842.644992
18:39:55 (37011): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN