Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:39:00 (2999391): wrapper (7.7.26015): starting
16:39:00 (2999391): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 16:39:00] Arguments: --nthreads 8
[2025-06-05 16:39:00] Threads: 8
[2025-06-05 16:39:00] Checking for CVMFS
[2025-06-05 16:39:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 16:39:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 16:39:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 16:39:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 16:39:00] 2.12.6.0 65732 1659 181140 146831 2 647 32912010 40960000 27472 16776704 0 18037730 99.735 11545700 36467 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 16:39:00] CVMFS is ok
[2025-06-05 16:39:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 16:39:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 16:39:00] Further information can be found at the LHC@home message board.
[2025-06-05 16:39:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 16:39:00] Checking for apptainer binary...
[2025-06-05 16:39:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 16:39:00] Running /usr/bin/apptainer --version
[2025-06-05 16:39:00] apptainer version 1.4.1-1.el9
[2025-06-05 16:39:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 16:39:00] c8-16-2.aglt2.org
[2025-06-05 16:39:00] apptainer works
[2025-06-05 16:39:00] Set ATHENA_PROC_NUMBER=8
[2025-06-05 16:39:00] Set ATHENA_CORE_NUMBER=8
[2025-06-05 16:39:00] Starting ATLAS job with PandaID=6668533293
[2025-06-05 16:39:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 17:40:06]  *** The last 200 lines of the pilot log: ***
[2025-06-05 17:40:06]  filetype=log
[2025-06-05 17:40:06]  guid=7f0edc50-01a4-49cd-ad92-090c1e2d67f3
[2025-06-05 17:40:06]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 17:40:06]  is_altstaged=None
[2025-06-05 17:40:06]  is_tar=False
[2025-06-05 17:40:06]  lfn=log.44871837._086031.job.log.tgz.1
[2025-06-05 17:40:06]  mtime=0
[2025-06-05 17:40:06]  protocol_id=None
[2025-06-05 17:40:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 17:40:06]  replicas=None
[2025-06-05 17:40:06]  scope=mc23_13p6TeV
[2025-06-05 17:40:06]  status=None
[2025-06-05 17:40:06]  status_code=0
[2025-06-05 17:40:06]  storage_token=
[2025-06-05 17:40:06]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668533293/log.44871837._086031.job.log.tgz.1
[2025-06-05 17:40:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/4c/log.44871837._086031.job.log.tgz.1
[2025-06-05 17:40:06]  workdir=None
[2025-06-05 17:40:06] ]
[2025-06-05 17:40:06] 2025-06-05 21:39:39,601 | INFO     | transferring file log.44871837._086031.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668533293/log.44871837._086031.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 17:40:06] 2025-06-05 21:39:39,601 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668533293/log.44871837._086031.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._086031.job
[2025-06-05 17:40:06] 2025-06-05 21:39:39,617 | INFO     | adding to output.list: log.44871837._086031.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/4c/log.44871837._086031.job.log.tg
[2025-06-05 17:40:06] 2025-06-05 21:39:39,618 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 17:40:06] 2025-06-05 21:39:39,618 | INFO     | summary of transferred files:
[2025-06-05 17:40:06] 2025-06-05 21:39:39,618 | INFO     |  -- lfn=log.44871837._086031.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 17:40:06] 2025-06-05 21:39:39,618 | INFO     | stage-out finished correctly
[2025-06-05 17:40:06] 2025-06-05 21:39:41,614 | INFO     | monitor loop #268: job 0:6668533293 is in state 'finished'
[2025-06-05 17:40:06] 2025-06-05 21:39:41,614 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:40:06] 2025-06-05 21:39:41,799 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 17:40:06] 2025-06-05 21:39:41,852 | INFO     | job 6668533293 has state=finished
[2025-06-05 17:40:06] 2025-06-05 21:39:41,852 | INFO     | preparing for final server update for job 6668533293 in state='finished'
[2025-06-05 17:40:06] 2025-06-05 21:39:41,853 | INFO     | this job has now completed (state=finished)
[2025-06-05 17:40:06] 2025-06-05 21:39:41,853 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 17:40:06] 2025-06-05 21:39:41,853 | INFO     | log transfer has been attempted: DONE
[2025-06-05 17:40:06] 2025-06-05 21:39:41,853 | INFO     | job 6668533293 has finished - writing final server update
[2025-06-05 17:40:06] 2025-06-05 21:39:41,853 | INFO     | total number of processed events: 400 (read)
[2025-06-05 17:40:06] 2025-06-05 21:39:41,871 | INFO     | executing command: lscpu
[2025-06-05 17:40:06] 2025-06-05 21:39:41,946 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 17:40:06] 2025-06-05 21:39:44,117 | INFO     | monitor loop #269: job 0:6668533293 is in state 'finished'
[2025-06-05 17:40:06] 2025-06-05 21:39:44,117 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:40:06] 2025-06-05 21:39:46,155 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 17:40:06] 2025-06-05 21:39:46,155 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668533293/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 17:40:06] 2025-06-05 21:39:46,156 | INFO     | extracted standard info from prmon json
[2025-06-05 17:40:06] 2025-06-05 21:39:46,156 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 17:40:06] 2025-06-05 21:39:46,156 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 17:40:06] 2025-06-05 21:39:46,156 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 17:40:06] 2025-06-05 21:39:46,156 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 17:40:06] 2025-06-05 21:39:46,157 | INFO     | fitting pss+swap vs Time
[2025-06-05 17:40:06] 2025-06-05 21:39:46,157 | INFO     | sum of square deviations: 43584073.0
[2025-06-05 17:40:06] 2025-06-05 21:39:46,158 | INFO     | sum of deviations: -8052234148.5
[2025-06-05 17:40:06] 2025-06-05 21:39:46,158 | INFO     | mean x: 1749157838.5
[2025-06-05 17:40:06] 2025-06-05 21:39:46,158 | INFO     | mean y: 2700459.3653846155
[2025-06-05 17:40:06] 2025-06-05 21:39:46,158 | INFO     | -- intersect: 323162687785.15173
[2025-06-05 17:40:06] 2025-06-05 21:39:46,158 | INFO     | intersect: 323162687785.15173
[2025-06-05 17:40:06] 2025-06-05 21:39:46,158 | INFO     | chi2: 0.09380748280524372
[2025-06-05 17:40:06] 2025-06-05 21:39:46,158 | INFO     | -- intersect: 323162687785.15173
[2025-06-05 17:40:06] 2025-06-05 21:39:46,158 | INFO     | current memory leak: -184.75 B/s (using 52 data points, chi2=0.09)
[2025-06-05 17:40:06] 2025-06-05 21:39:46,159 | INFO     | ..............................
[2025-06-05 17:40:06] 2025-06-05 21:39:46,159 | INFO     | . Timing measurements:
[2025-06-05 17:40:06] 2025-06-05 21:39:46,159 | INFO     | . get job = 0 s
[2025-06-05 17:40:06] 2025-06-05 21:39:46,159 | INFO     | . initial setup = 2 s
[2025-06-05 17:40:06] 2025-06-05 21:39:46,159 | INFO     | . payload setup = 6 s
[2025-06-05 17:40:06] 2025-06-05 21:39:46,159 | INFO     | . stage-in = 0 s
[2025-06-05 17:40:06] 2025-06-05 21:39:46,159 | INFO     | . payload execution = 3600 s
[2025-06-05 17:40:06] 2025-06-05 21:39:46,159 | INFO     | . stage-out = 0 s
[2025-06-05 17:40:06] 2025-06-05 21:39:46,159 | INFO     | . log creation = 0 s
[2025-06-05 17:40:06] 2025-06-05 21:39:46,159 | INFO     | ..............................
[2025-06-05 17:40:06] 2025-06-05 21:39:46,217 | INFO     | 
[2025-06-05 17:40:06] 2025-06-05 21:39:46,218 | INFO     | job summary report
[2025-06-05 17:40:06] 2025-06-05 21:39:46,218 | INFO     | --------------------------------------------------
[2025-06-05 17:40:06] 2025-06-05 21:39:46,218 | INFO     | PanDA job id: 6668533293
[2025-06-05 17:40:06] 2025-06-05 21:39:46,218 | INFO     | task id: 44871837
[2025-06-05 17:40:06] 2025-06-05 21:39:46,218 | INFO     | errors: (none)
[2025-06-05 17:40:06] 2025-06-05 21:39:46,218 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 17:40:06] 2025-06-05 21:39:46,218 | INFO     | pilot state: finished 
[2025-06-05 17:40:06] 2025-06-05 21:39:46,218 | INFO     | transexitcode: 0
[2025-06-05 17:40:06] 2025-06-05 21:39:46,218 | INFO     | exeerrorcode: 0
[2025-06-05 17:40:06] 2025-06-05 21:39:46,218 | INFO     | exeerrordiag: 
[2025-06-05 17:40:06] 2025-06-05 21:39:46,218 | INFO     | exitcode: 0
[2025-06-05 17:40:06] 2025-06-05 21:39:46,218 | INFO     | exitmsg: OK
[2025-06-05 17:40:06] 2025-06-05 21:39:46,218 | INFO     | cpuconsumptiontime: 26890 s
[2025-06-05 17:40:06] 2025-06-05 21:39:46,218 | INFO     | nevents: 400
[2025-06-05 17:40:06] 2025-06-05 21:39:46,218 | INFO     | neventsw: 0
[2025-06-05 17:40:06] 2025-06-05 21:39:46,218 | INFO     | pid: 3014195
[2025-06-05 17:40:06] 2025-06-05 21:39:46,218 | INFO     | pgrp: 3014195
[2025-06-05 17:40:06] 2025-06-05 21:39:46,218 | INFO     | corecount: 8
[2025-06-05 17:40:06] 2025-06-05 21:39:46,219 | INFO     | event service: False
[2025-06-05 17:40:06] 2025-06-05 21:39:46,219 | INFO     | sizes: {0: 2397392, 4: 2397598, 11: 2397626, 3611: 2423175, 3613: 2432116, 3615: 2432172, 3619: 2432470}
[2025-06-05 17:40:06] 2025-06-05 21:39:46,219 | INFO     | --------------------------------------------------
[2025-06-05 17:40:06] 2025-06-05 21:39:46,219 | INFO     | 
[2025-06-05 17:40:06] 2025-06-05 21:39:46,219 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 17:40:06] 2025-06-05 21:39:46,236 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 17:40:06] 2025-06-05 21:39:46,236 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 17:40:06] 2025-06-05 21:39:46,236 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 17:40:06] 2025-06-05 21:39:46,236 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 17:40:06] 2025-06-05 21:39:46,236 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 17:40:06] 2025-06-05 21:39:46,236 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 17:40:06] 2025-06-05 21:39:46,236 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 17:40:06] 2025-06-05 21:39:46,236 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 17:40:06] 2025-06-05 21:39:46,236 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 17:40:06] 2025-06-05 21:39:46,236 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 17:40:06] 2025-06-05 21:39:46,236 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 17:40:06] 2025-06-05 21:39:46,236 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 17:40:06] 2025-06-05 21:39:46,236 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 17:40:06] 2025-06-05 21:39:46,236 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 17:40:06] 2025-06-05 21:39:46,236 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 17:40:06] 2025-06-05 21:39:46,236 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 17:40:06] 2025-06-05 21:39:46,236 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 17:40:06] 2025-06-05 21:39:46,236 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 17:40:06] 2025-06-05 21:39:46,236 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 17:40:06] 2025-06-05 21:39:46,236 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 17:40:06] 2025-06-05 21:39:46,237 | INFO     | job 6668533293 has completed (purged errors)
[2025-06-05 17:40:06] 2025-06-05 21:39:46,237 | INFO     | overall cleanup function is called
[2025-06-05 17:40:06] 2025-06-05 21:39:47,244 | INFO     | --- collectZombieJob: --- 10, [3014195]
[2025-06-05 17:40:06] 2025-06-05 21:39:47,244 | INFO     | zombie collector waiting for pid 3014195
[2025-06-05 17:40:06] 2025-06-05 21:39:47,244 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 17:40:06] 2025-06-05 21:39:47,244 | INFO     | collected zombie processes
[2025-06-05 17:40:06] 2025-06-05 21:39:47,244 | INFO     | will attempt to kill all subprocesses of pid=3014195
[2025-06-05 17:40:06] 2025-06-05 21:39:47,612 | INFO     | process IDs to be killed: [3014195] (in reverse order)
[2025-06-05 17:40:06] 2025-06-05 21:39:47,733 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 17:40:06] 2025-06-05 21:39:47,734 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 17:40:06] 2025-06-05 21:39:47,757 | INFO     | did not find any defunct processes belonging to 3014195
[2025-06-05 17:40:06] 2025-06-05 21:39:47,780 | INFO     | did not find any defunct processes belonging to 3014195
[2025-06-05 17:40:06] 2025-06-05 21:39:47,780 | INFO     | ready for new job
[2025-06-05 17:40:06] 2025-06-05 21:39:47,780 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 17:40:06] 2025-06-05 21:39:47,781 | INFO     | **************************************
[2025-06-05 17:40:06] 2025-06-05 21:39:47,781 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 17:40:06] 2025-06-05 21:39:47,781 | INFO     | **************************************
[2025-06-05 17:40:06] 2025-06-05 21:39:47,781 | INFO     | 
[2025-06-05 17:40:06] 2025-06-05 21:39:47,800 | INFO     | architecture information:
[2025-06-05 17:40:06] 2025-06-05 21:39:47,800 | INFO     | executing command: cat /etc/os-release
[2025-06-05 17:40:06] 2025-06-05 21:39:47,814 | INFO     | cat /etc/os-release:
[2025-06-05 17:40:06] NAME="CentOS Linux"
[2025-06-05 17:40:06] VERSION="7 (Core)"
[2025-06-05 17:40:06] ID="centos"
[2025-06-05 17:40:06] ID_LIKE="rhel fedora"
[2025-06-05 17:40:06] VERSION_ID="7"
[2025-06-05 17:40:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 17:40:06] ANSI_COLOR="0;31"
[2025-06-05 17:40:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 17:40:06] HOME_URL="https://www.centos.org/"
[2025-06-05 17:40:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 17:40:06] 
[2025-06-05 17:40:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 17:40:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 17:40:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 17:40:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 17:40:06] 
[2025-06-05 17:40:06] 2025-06-05 21:39:47,814 | INFO     | **************************************
[2025-06-05 17:40:06] 2025-06-05 21:39:48,317 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 17:40:06] 2025-06-05 21:39:48,330 | INFO     | sufficient remaining disk space (173729120256 B)
[2025-06-05 17:40:06] 2025-06-05 21:39:48,330 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 17:40:06] 2025-06-05 21:39:48,331 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 17:40:06] 2025-06-05 21:39:48,331 | INFO     | update_server=False
[2025-06-05 17:40:06] 2025-06-05 21:39:48,331 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 17:40:06] 2025-06-05 21:39:48,331 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 17:40:06] 2025-06-05 21:39:48,331 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 17:40:06] 2025-06-05 21:39:48,331 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 17:40:06] 2025-06-05 21:39:48,332 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:40:06] 2025-06-05 21:39:48,332 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 17:40:06] 2025-06-05 21:39:48,334 | INFO     | aborting loop
[2025-06-05 17:40:06] 2025-06-05 21:39:48,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 17:40:06] 2025-06-05 21:39:48,334 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 17:40:06] 2025-06-05 21:39:48,609 | INFO     | all payload control threads have been joined
[2025-06-05 17:40:06] 2025-06-05 21:39:48,944 | INFO     | all data control threads have been joined
[2025-06-05 17:40:06] 2025-06-05 21:39:49,335 | INFO     | [job] retrieve thread has finished
[2025-06-05 17:40:06] 2025-06-05 21:39:49,338 | INFO     | [job] job monitor thread has finished
[2025-06-05 17:40:06] 2025-06-05 21:39:49,447 | INFO     | all job control threads have been joined
[2025-06-05 17:40:06] 2025-06-05 21:39:49,614 | INFO     | [payload] control thread has finished
[2025-06-05 17:40:06] 2025-06-05 21:39:49,777 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 17:40:06] 2025-06-05 21:39:49,824 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 17:40:06] 2025-06-05 21:39:49,886 | INFO     | [payload] validate_post thread has finished
[2025-06-05 17:40:06] 2025-06-05 21:39:49,949 | INFO     | [data] control thread has finished
[2025-06-05 17:40:06] 2025-06-05 21:39:50,166 | INFO     | [job] validate thread has finished
[2025-06-05 17:40:06] 2025-06-05 21:39:50,338 | INFO     | [data] copytool_out thread has finished
[2025-06-05 17:40:06] 2025-06-05 21:39:50,452 | INFO     | [job] control thread has finished
[2025-06-05 17:40:06] 2025-06-05 21:39:50,624 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 17:40:06] 2025-06-05 21:39:50,784 | INFO     | [data] copytool_in thread has finished
[2025-06-05 17:40:06] 2025-06-05 21:39:50,830 | INFO     | [payload] failed_post thread has finished
[2025-06-05 17:40:06] 2025-06-05 21:39:51,228 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:40:06] 2025-06-05 21:39:52,234 | INFO     | [job] queue monitor thread has finished
[2025-06-05 17:40:06] 2025-06-05 21:39:52,339 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 17:40:06] 2025-06-05 21:39:58,730 | INFO     | job.realtimelogging is not enabled
[2025-06-05 17:40:06] 2025-06-05 21:39:59,737 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 17:40:06] 2025-06-05 21:40:01,418 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140300195137344)>', '<ExcThread(monitor, started 140299686876928)>']
[2025-06-05 17:40:06] 2025-06-05 21:40:02,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 17:40:06] 2025-06-05 21:40:02,405 | INFO     | [monitor] control thread has ended
[2025-06-05 17:40:06] 2025-06-05 21:40:06,443 | INFO     | all workflow threads have been joined
[2025-06-05 17:40:06] 2025-06-05 21:40:06,443 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 17:40:06] 2025-06-05 21:40:06,444 | INFO     | traces error code: 0
[2025-06-05 17:40:06] 2025-06-05 21:40:06,444 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 17:40:06] 2025-06-05 21:40:06,668 [wrapper] ==== pilot stdout END ====
[2025-06-05 17:40:06] 2025-06-05 21:40:06,671 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 17:40:06] 2025-06-05 21:40:06,674 [wrapper] pilotpid: 3004557
[2025-06-05 17:40:06] 2025-06-05 21:40:06,677 [wrapper] Pilot exit status: 0
[2025-06-05 17:40:06] 2025-06-05 21:40:06,694 [wrapper] pandaids: 6668533293
[2025-06-05 17:40:06] 2025-06-05 21:40:06,793 [wrapper] cleanup supervisor_pilot 1236713 3004558
[2025-06-05 17:40:06] 2025-06-05 21:40:06,797 [wrapper] Test setup, not cleaning
[2025-06-05 17:40:06] 2025-06-05 21:40:06,799 [wrapper] apfmon messages muted
[2025-06-05 17:40:06] 2025-06-05 21:40:06,802 [wrapper] ==== wrapper stdout END ====
[2025-06-05 17:40:06] 2025-06-05 21:40:06,804 [wrapper] ==== wrapper stderr END ====
[2025-06-05 17:40:06]  *** Error codes and diagnostics ***
[2025-06-05 17:40:06]     "exeErrorCode": 0,
[2025-06-05 17:40:06]     "exeErrorDiag": "",
[2025-06-05 17:40:06]     "pilotErrorCode": 0,
[2025-06-05 17:40:06]     "pilotErrorDiag": "",
[2025-06-05 17:40:06]  *** Listing of results directory ***
[2025-06-05 17:40:06] total 416700
[2025-06-05 17:40:06] -rw-r--r--. 1 boincer umatlas    495897 May 28 11:06 pilot3.tar.gz
[2025-06-05 17:40:06] -rw-r--r--. 1 boincer umatlas      5111 May 28 11:10 queuedata.json
[2025-06-05 17:40:06] -rwx------. 1 boincer umatlas     37140 May 28 11:11 runpilot2-wrapper.sh
[2025-06-05 17:40:06] -rw-r--r--. 1 boincer umatlas       100 Jun  5 16:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 17:40:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 16:38 run_atlas
[2025-06-05 17:40:06] -rw-r--r--. 1 boincer umatlas       105 Jun  5 16:38 job.xml
[2025-06-05 17:40:06] -rw-r--r--. 2 boincer umatlas 224338010 Jun  5 16:38 EVNT.44871834._003355.pool.root.1
[2025-06-05 17:40:06] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 16:38 start_atlas.sh
[2025-06-05 17:40:06] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 16:38 shared
[2025-06-05 17:40:06] -rw-r--r--. 2 boincer umatlas    508874 Jun  5 16:38 input.tar.gz
[2025-06-05 17:40:06] -rw-r--r--. 1 boincer umatlas         0 Jun  5 16:39 boinc_lockfile
[2025-06-05 17:40:06] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 16:39 pandaJob.out
[2025-06-05 17:40:06] -rw-------. 1 boincer umatlas    987599 Jun  5 16:39 agis_schedconf.cvmfs.json
[2025-06-05 17:40:06] -rw-------. 1 boincer umatlas   1598969 Jun  5 16:39 agis_ddmendpoints.agis.ALL.json
[2025-06-05 17:40:06] drwx------. 4 boincer umatlas      4096 Jun  5 16:39 pilot3
[2025-06-05 17:40:06] -rw-r--r--. 1 boincer umatlas      7158 Jun  5 17:29 init_data.xml
[2025-06-05 17:40:06] -rw-------. 1 boincer umatlas 197186292 Jun  5 17:39 HITS.44871837._086031.pool.root.1
[2025-06-05 17:40:06] -rw-r--r--. 1 boincer umatlas       529 Jun  5 17:39 boinc_task_state.xml
[2025-06-05 17:40:06] -rw-------. 1 boincer umatlas        95 Jun  5 17:39 pilot_heartbeat.json
[2025-06-05 17:40:06] -rw-------. 1 boincer umatlas      1034 Jun  5 17:39 memory_monitor_summary.json
[2025-06-05 17:40:06] -rw-------. 1 boincer umatlas    299199 Jun  5 17:39 log.44871837._086031.job.log.tgz.1
[2025-06-05 17:40:06] -rw-------. 1 boincer umatlas      7696 Jun  5 17:39 heartbeat.json
[2025-06-05 17:40:06] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 17:40 boinc_mmap_file
[2025-06-05 17:40:06] -rw-r--r--. 1 boincer umatlas        27 Jun  5 17:40 wrapper_checkpoint.txt
[2025-06-05 17:40:06] -rw-------. 1 boincer umatlas      4549 Jun  5 17:40 pilotlog.txt
[2025-06-05 17:40:06] -rw-------. 1 boincer umatlas    371125 Jun  5 17:40 log.44871837._086031.job.log.1
[2025-06-05 17:40:06] -rw-------. 1 boincer umatlas       357 Jun  5 17:40 output.list
[2025-06-05 17:40:06] -rw-r--r--. 1 boincer umatlas       620 Jun  5 17:40 runtime_log
[2025-06-05 17:40:06] -rw-------. 1 boincer umatlas    686080 Jun  5 17:40 result.tar.gz
[2025-06-05 17:40:06] -rw-r--r--. 1 boincer umatlas      8654 Jun  5 17:40 runtime_log.err
[2025-06-05 17:40:06] -rw-------. 1 boincer umatlas       652 Jun  5 17:40 BhrKDm6bXe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmbgTKDmLjqWXm.diag
[2025-06-05 17:40:06] -rw-r--r--. 1 boincer umatlas     21205 Jun  5 17:40 stderr.txt
[2025-06-05 17:40:06] HITS file was successfully produced:
[2025-06-05 17:40:06] -rw-------. 1 boincer umatlas 197186292 Jun  5 17:39 shared/HITS.pool.root.1
[2025-06-05 17:40:06]  *** Contents of shared directory: ***
[2025-06-05 17:40:06] total 412844
[2025-06-05 17:40:06] -rw-r--r--. 2 boincer umatlas 224338010 Jun  5 16:38 ATLAS.root_0
[2025-06-05 17:40:06] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 16:38 start_atlas.sh
[2025-06-05 17:40:06] -rw-r--r--. 2 boincer umatlas    508874 Jun  5 16:38 input.tar.gz
[2025-06-05 17:40:06] -rw-------. 1 boincer umatlas 197186292 Jun  5 17:39 HITS.pool.root.1
[2025-06-05 17:40:06] -rw-------. 1 boincer umatlas    686080 Jun  5 17:40 result.tar.gz
17:40:08 (2999391): run_atlas exited; CPU time 26956.243192
17:40:08 (2999391): called boinc_finish(0)

</stderr_txt>
]]>

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