Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:28:34 (22395): wrapper (7.7.26015): starting
16:28:34 (22395): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 16:28:34] Arguments: --nthreads 12
[2025-06-05 16:28:34] Threads: 12
[2025-06-05 16:28:34] Checking for CVMFS
[2025-06-05 16:28:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 16:28:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 16:28:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 16:28:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 16:28:34] 2.11.2.0 2937 37602 93144 146831 3 1 12400127 20275201 1 130560 0 17106445 99.983 7097753 8621 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 16:28:34] CVMFS is ok
[2025-06-05 16:28:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 16:28:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 16:28:34] Further information can be found at the LHC@home message board.
[2025-06-05 16:28:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 16:28:34] Checking for apptainer binary...
[2025-06-05 16:28:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 16:28:34] Running /usr/bin/apptainer --version
[2025-06-05 16:28:34] apptainer version 1.3.2-1.el7
[2025-06-05 16:28:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 16:28:36] c-205-8.aglt2.org
[2025-06-05 16:28:36] apptainer works
[2025-06-05 16:28:36] Set ATHENA_PROC_NUMBER=12
[2025-06-05 16:28:36] Set ATHENA_CORE_NUMBER=12
[2025-06-05 16:28:36] Starting ATLAS job with PandaID=6670895951
[2025-06-05 16:28:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 18:02:15]  *** The last 200 lines of the pilot log: ***
[2025-06-05 18:02:15]  is_tar=False
[2025-06-05 18:02:15]  lfn=log.44871837._099207.job.log.tgz.1
[2025-06-05 18:02:15]  mtime=0
[2025-06-05 18:02:15]  protocol_id=None
[2025-06-05 18:02:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 18:02:15]  replicas=None
[2025-06-05 18:02:15]  scope=mc23_13p6TeV
[2025-06-05 18:02:15]  status=None
[2025-06-05 18:02:15]  status_code=0
[2025-06-05 18:02:15]  storage_token=
[2025-06-05 18:02:15]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6670895951/log.44871837._099207.job.log.tgz.1
[2025-06-05 18:02:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8e/d6/log.44871837._099207.job.log.tgz.1
[2025-06-05 18:02:15]  workdir=None
[2025-06-05 18:02:15] ]
[2025-06-05 18:02:15] 2025-06-05 22:01:49,814 | INFO     | transferring file log.44871837._099207.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6670895951/log.44871837._099207.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 18:02:15] 2025-06-05 22:01:49,814 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6670895951/log.44871837._099207.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._099207.job
[2025-06-05 18:02:15] 2025-06-05 22:01:49,834 | INFO     | adding to output.list: log.44871837._099207.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8e/d6/log.44871837._099207.job.log.tg
[2025-06-05 18:02:15] 2025-06-05 22:01:49,835 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 18:02:15] 2025-06-05 22:01:49,835 | INFO     | summary of transferred files:
[2025-06-05 18:02:15] 2025-06-05 22:01:49,835 | INFO     |  -- lfn=log.44871837._099207.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 18:02:15] 2025-06-05 22:01:49,835 | INFO     | stage-out finished correctly
[2025-06-05 18:02:15] 2025-06-05 22:01:50,243 | WARNING  | process 32450 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 18:02:15] 2025-06-05 22:01:50,243 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6670895951/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 18:02:15] 2025-06-05 22:01:50,331 | INFO     | number of running child processes to parent process 32450: 1
[2025-06-05 18:02:15] 2025-06-05 22:01:50,331 | INFO     | maximum number of monitored processes: 6
[2025-06-05 18:02:15] 2025-06-05 22:01:51,218 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 18:02:15] 2025-06-05 22:01:51,804 | INFO     | job 6670895951 has state=finished
[2025-06-05 18:02:15] 2025-06-05 22:01:51,804 | INFO     | preparing for final server update for job 6670895951 in state='finished'
[2025-06-05 18:02:15] 2025-06-05 22:01:51,805 | INFO     | this job has now completed (state=finished)
[2025-06-05 18:02:15] 2025-06-05 22:01:51,805 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 18:02:15] 2025-06-05 22:01:51,805 | INFO     | log transfer has been attempted: DONE
[2025-06-05 18:02:15] 2025-06-05 22:01:51,806 | INFO     | job 6670895951 has finished - writing final server update
[2025-06-05 18:02:15] 2025-06-05 22:01:51,806 | INFO     | total number of processed events: 400 (read)
[2025-06-05 18:02:15] 2025-06-05 22:01:51,808 | INFO     | executing command: lscpu
[2025-06-05 18:02:15] 2025-06-05 22:01:51,834 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 18:02:15] 2025-06-05 22:01:52,834 | INFO     | monitor loop #416: job 0:6670895951 is in state 'finished'
[2025-06-05 18:02:15] 2025-06-05 22:01:52,834 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 18:02:15] 2025-06-05 22:01:55,337 | INFO     | monitor loop #417: job 0:6670895951 is in state 'finished'
[2025-06-05 18:02:15] 2025-06-05 22:01:55,337 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 18:02:15] 2025-06-05 22:01:56,428 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 18:02:15] 2025-06-05 22:01:56,429 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6670895951/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 18:02:15] 2025-06-05 22:01:56,430 | INFO     | extracted standard info from prmon json
[2025-06-05 18:02:15] 2025-06-05 22:01:56,430 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 18:02:15] 2025-06-05 22:01:56,430 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 18:02:15] 2025-06-05 22:01:56,431 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 18:02:15] 2025-06-05 22:01:56,431 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 18:02:15] 2025-06-05 22:01:56,434 | INFO     | fitting pss+swap vs Time
[2025-06-05 18:02:15] 2025-06-05 22:01:56,434 | INFO     | sum of square deviations: 183761585.0
[2025-06-05 18:02:15] 2025-06-05 22:01:56,435 | INFO     | sum of deviations: -13594643457.500004
[2025-06-05 18:02:15] 2025-06-05 22:01:56,435 | INFO     | mean x: 1749158197.5
[2025-06-05 18:02:15] 2025-06-05 22:01:56,435 | INFO     | mean y: 2816500.9166666665
[2025-06-05 18:02:15] 2025-06-05 22:01:56,435 | INFO     | -- intersect: 129405172525.30489
[2025-06-05 18:02:15] 2025-06-05 22:01:56,436 | INFO     | intersect: 129405172525.30489
[2025-06-05 18:02:15] 2025-06-05 22:01:56,436 | INFO     | chi2: 0.07308225721316906
[2025-06-05 18:02:15] 2025-06-05 22:01:56,436 | INFO     | -- intersect: 129405172525.30489
[2025-06-05 18:02:15] 2025-06-05 22:01:56,436 | INFO     | current memory leak: -73.98 B/s (using 84 data points, chi2=0.07)
[2025-06-05 18:02:15] 2025-06-05 22:01:56,437 | INFO     | ..............................
[2025-06-05 18:02:15] 2025-06-05 22:01:56,437 | INFO     | . Timing measurements:
[2025-06-05 18:02:15] 2025-06-05 22:01:56,437 | INFO     | . get job = 0 s
[2025-06-05 18:02:15] 2025-06-05 22:01:56,437 | INFO     | . initial setup = 2 s
[2025-06-05 18:02:15] 2025-06-05 22:01:56,438 | INFO     | . payload setup = 9 s
[2025-06-05 18:02:15] 2025-06-05 22:01:56,438 | INFO     | . stage-in = 0 s
[2025-06-05 18:02:15] 2025-06-05 22:01:56,438 | INFO     | . payload execution = 5549 s
[2025-06-05 18:02:15] 2025-06-05 22:01:56,438 | INFO     | . stage-out = 0 s
[2025-06-05 18:02:15] 2025-06-05 22:01:56,438 | INFO     | . log creation = 0 s
[2025-06-05 18:02:15] 2025-06-05 22:01:56,438 | INFO     | ..............................
[2025-06-05 18:02:15] 2025-06-05 22:01:56,522 | INFO     | 
[2025-06-05 18:02:15] 2025-06-05 22:01:56,522 | INFO     | job summary report
[2025-06-05 18:02:15] 2025-06-05 22:01:56,522 | INFO     | --------------------------------------------------
[2025-06-05 18:02:15] 2025-06-05 22:01:56,522 | INFO     | PanDA job id: 6670895951
[2025-06-05 18:02:15] 2025-06-05 22:01:56,522 | INFO     | task id: 44871837
[2025-06-05 18:02:15] 2025-06-05 22:01:56,522 | INFO     | errors: (none)
[2025-06-05 18:02:15] 2025-06-05 22:01:56,522 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 18:02:15] 2025-06-05 22:01:56,523 | INFO     | pilot state: finished 
[2025-06-05 18:02:15] 2025-06-05 22:01:56,523 | INFO     | transexitcode: 0
[2025-06-05 18:02:15] 2025-06-05 22:01:56,523 | INFO     | exeerrorcode: 0
[2025-06-05 18:02:15] 2025-06-05 22:01:56,523 | INFO     | exeerrordiag: 
[2025-06-05 18:02:15] 2025-06-05 22:01:56,523 | INFO     | exitcode: 0
[2025-06-05 18:02:15] 2025-06-05 22:01:56,523 | INFO     | exitmsg: OK
[2025-06-05 18:02:15] 2025-06-05 22:01:56,523 | INFO     | cpuconsumptiontime: 61098 s
[2025-06-05 18:02:15] 2025-06-05 22:01:56,523 | INFO     | nevents: 400
[2025-06-05 18:02:15] 2025-06-05 22:01:56,523 | INFO     | neventsw: 0
[2025-06-05 18:02:15] 2025-06-05 22:01:56,523 | INFO     | pid: 32450
[2025-06-05 18:02:15] 2025-06-05 22:01:56,524 | INFO     | pgrp: 32450
[2025-06-05 18:02:15] 2025-06-05 22:01:56,524 | INFO     | corecount: 12
[2025-06-05 18:02:15] 2025-06-05 22:01:56,524 | INFO     | event service: False
[2025-06-05 18:02:15] 2025-06-05 22:01:56,524 | INFO     | sizes: {0: 2397118, 1: 2397317, 6: 2397523, 11: 2397551, 5563: 2423993, 5564: 2432934, 5565: 2433118, 5571: 2433288}
[2025-06-05 18:02:15] 2025-06-05 22:01:56,524 | INFO     | --------------------------------------------------
[2025-06-05 18:02:15] 2025-06-05 22:01:56,524 | INFO     | 
[2025-06-05 18:02:15] 2025-06-05 22:01:56,524 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 18:02:15] 2025-06-05 22:01:56,545 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 18:02:15] 2025-06-05 22:01:56,545 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 18:02:15] 2025-06-05 22:01:56,545 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 18:02:15] 2025-06-05 22:01:56,545 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 18:02:15] 2025-06-05 22:01:56,546 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 18:02:15] 2025-06-05 22:01:56,546 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 18:02:15] 2025-06-05 22:01:56,546 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 18:02:15] 2025-06-05 22:01:56,546 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 18:02:15] 2025-06-05 22:01:56,546 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 18:02:15] 2025-06-05 22:01:56,546 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 18:02:15] 2025-06-05 22:01:56,547 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 18:02:15] 2025-06-05 22:01:56,547 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 18:02:15] 2025-06-05 22:01:56,547 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 18:02:15] 2025-06-05 22:01:56,547 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 18:02:15] 2025-06-05 22:01:56,547 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 18:02:15] 2025-06-05 22:01:56,547 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 18:02:15] 2025-06-05 22:01:56,548 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 18:02:15] 2025-06-05 22:01:56,548 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 18:02:15] 2025-06-05 22:01:56,548 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 18:02:15] 2025-06-05 22:01:56,548 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 18:02:15] 2025-06-05 22:01:56,548 | INFO     | job 6670895951 has completed (purged errors)
[2025-06-05 18:02:15] 2025-06-05 22:01:56,549 | INFO     | overall cleanup function is called
[2025-06-05 18:02:15] 2025-06-05 22:01:57,556 | INFO     | --- collectZombieJob: --- 10, [32450]
[2025-06-05 18:02:15] 2025-06-05 22:01:57,556 | INFO     | zombie collector waiting for pid 32450
[2025-06-05 18:02:15] 2025-06-05 22:01:57,556 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 18:02:15] 2025-06-05 22:01:57,557 | INFO     | collected zombie processes
[2025-06-05 18:02:15] 2025-06-05 22:01:57,557 | INFO     | will attempt to kill all subprocesses of pid=32450
[2025-06-05 18:02:15] 2025-06-05 22:01:57,650 | INFO     | process IDs to be killed: [32450] (in reverse order)
[2025-06-05 18:02:15] 2025-06-05 22:01:57,698 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 18:02:15] 2025-06-05 22:01:57,698 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 18:02:15] 2025-06-05 22:01:57,702 | INFO     | did not find any defunct processes belonging to 32450
[2025-06-05 18:02:15] 2025-06-05 22:01:57,705 | INFO     | did not find any defunct processes belonging to 32450
[2025-06-05 18:02:15] 2025-06-05 22:01:57,705 | INFO     | ready for new job
[2025-06-05 18:02:15] 2025-06-05 22:01:57,706 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 18:02:15] 2025-06-05 22:01:57,708 | INFO     | **************************************
[2025-06-05 18:02:15] 2025-06-05 22:01:57,708 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 18:02:15] 2025-06-05 22:01:57,708 | INFO     | **************************************
[2025-06-05 18:02:15] 2025-06-05 22:01:57,708 | INFO     | 
[2025-06-05 18:02:15] 2025-06-05 22:01:57,709 | INFO     | architecture information:
[2025-06-05 18:02:15] 2025-06-05 22:01:57,709 | INFO     | executing command: cat /etc/os-release
[2025-06-05 18:02:15] 2025-06-05 22:01:57,723 | INFO     | cat /etc/os-release:
[2025-06-05 18:02:15] NAME="CentOS Linux"
[2025-06-05 18:02:15] VERSION="7 (Core)"
[2025-06-05 18:02:15] ID="centos"
[2025-06-05 18:02:15] ID_LIKE="rhel fedora"
[2025-06-05 18:02:15] VERSION_ID="7"
[2025-06-05 18:02:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 18:02:15] ANSI_COLOR="0;31"
[2025-06-05 18:02:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 18:02:15] HOME_URL="https://www.centos.org/"
[2025-06-05 18:02:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 18:02:15] 
[2025-06-05 18:02:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 18:02:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 18:02:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 18:02:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 18:02:15] 
[2025-06-05 18:02:15] 2025-06-05 22:01:57,723 | INFO     | **************************************
[2025-06-05 18:02:15] 2025-06-05 22:01:58,225 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 18:02:15] 2025-06-05 22:01:58,241 | INFO     | sufficient remaining disk space (29382148096 B)
[2025-06-05 18:02:15] 2025-06-05 22:01:58,241 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 18:02:15] 2025-06-05 22:01:58,242 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 18:02:15] 2025-06-05 22:01:58,242 | INFO     | update_server=False
[2025-06-05 18:02:15] 2025-06-05 22:01:58,242 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 18:02:15] 2025-06-05 22:01:58,242 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 18:02:15] 2025-06-05 22:01:58,243 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 18:02:15] 2025-06-05 22:01:58,243 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 18:02:15] 2025-06-05 22:01:58,243 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:02:15] 2025-06-05 22:01:58,244 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 18:02:15] 2025-06-05 22:01:58,244 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 18:02:15] 2025-06-05 22:01:58,244 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 18:02:15] 2025-06-05 22:01:58,845 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:02:15] 2025-06-05 22:01:58,845 | INFO     | aborting loop
[2025-06-05 18:02:15] 2025-06-05 22:01:59,132 | INFO     | all payload control threads have been joined
[2025-06-05 18:02:15] 2025-06-05 22:01:59,221 | INFO     | all job control threads have been joined
[2025-06-05 18:02:15] 2025-06-05 22:01:59,247 | INFO     | [job] retrieve thread has finished
[2025-06-05 18:02:15] 2025-06-05 22:01:59,249 | INFO     | [job] queue monitor thread has finished
[2025-06-05 18:02:15] 2025-06-05 22:01:59,262 | INFO     | all data control threads have been joined
[2025-06-05 18:02:15] 2025-06-05 22:01:59,354 | INFO     | [data] copytool_in thread has finished
[2025-06-05 18:02:15] 2025-06-05 22:01:59,678 | INFO     | [payload] validate_post thread has finished
[2025-06-05 18:02:15] 2025-06-05 22:01:59,850 | INFO     | [job] job monitor thread has finished
[2025-06-05 18:02:15] 2025-06-05 22:01:59,913 | INFO     | [job] validate thread has finished
[2025-06-05 18:02:15] 2025-06-05 22:02:00,138 | INFO     | [payload] control thread has finished
[2025-06-05 18:02:15] 2025-06-05 22:02:00,194 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 18:02:15] 2025-06-05 22:02:00,223 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 18:02:15] 2025-06-05 22:02:00,226 | INFO     | [job] control thread has finished
[2025-06-05 18:02:15] 2025-06-05 22:02:00,249 | INFO     | [data] copytool_out thread has finished
[2025-06-05 18:02:15] 2025-06-05 22:02:00,267 | INFO     | [data] control thread has finished
[2025-06-05 18:02:15] 2025-06-05 22:02:00,479 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 18:02:15] 2025-06-05 22:02:00,715 | INFO     | [payload] failed_post thread has finished
[2025-06-05 18:02:15] 2025-06-05 22:02:02,249 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 18:02:15] 2025-06-05 22:02:08,704 | INFO     | job.realtimelogging is not enabled
[2025-06-05 18:02:15] 2025-06-05 22:02:09,709 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 18:02:15] 2025-06-05 22:02:09,838 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140316754769728)>', '<ExcThread(monitor, started 140316044687104)>']
[2025-06-05 18:02:15] 2025-06-05 22:02:10,297 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 18:02:15] 2025-06-05 22:02:10,298 | INFO     | [monitor] control thread has ended
[2025-06-05 18:02:15] 2025-06-05 22:02:14,859 | INFO     | all workflow threads have been joined
[2025-06-05 18:02:15] 2025-06-05 22:02:14,859 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 18:02:15] 2025-06-05 22:02:14,860 | INFO     | traces error code: 0
[2025-06-05 18:02:15] 2025-06-05 22:02:14,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 18:02:15] 2025-06-05 22:02:14,959 [wrapper] ==== pilot stdout END ====
[2025-06-05 18:02:15] 2025-06-05 22:02:14,963 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 18:02:15] 2025-06-05 22:02:14,967 [wrapper] pilotpid: 25995
[2025-06-05 18:02:15] 2025-06-05 22:02:14,971 [wrapper] Pilot exit status: 0
[2025-06-05 18:02:15] 2025-06-05 22:02:14,986 [wrapper] pandaids: 6670895951
[2025-06-05 18:02:15] 2025-06-05 22:02:15,023 [wrapper] cleanup supervisor_pilot 30921 25996
[2025-06-05 18:02:15] 2025-06-05 22:02:15,026 [wrapper] Test setup, not cleaning
[2025-06-05 18:02:15] 2025-06-05 22:02:15,030 [wrapper] apfmon messages muted
[2025-06-05 18:02:15] 2025-06-05 22:02:15,035 [wrapper] ==== wrapper stdout END ====
[2025-06-05 18:02:15] 2025-06-05 22:02:15,039 [wrapper] ==== wrapper stderr END ====
[2025-06-05 18:02:15]  *** Error codes and diagnostics ***
[2025-06-05 18:02:15]     "exeErrorCode": 0,
[2025-06-05 18:02:15]     "exeErrorDiag": "",
[2025-06-05 18:02:15]     "pilotErrorCode": 0,
[2025-06-05 18:02:15]     "pilotErrorDiag": "",
[2025-06-05 18:02:15]  *** Listing of results directory ***
[2025-06-05 18:02:15] total 419244
[2025-06-05 18:02:15] -rw-r--r-- 1 boincer umatlas    495897 May 29 06:51 pilot3.tar.gz
[2025-06-05 18:02:15] -rw-r--r-- 1 boincer umatlas      5111 May 29 06:59 queuedata.json
[2025-06-05 18:02:15] -rwx------ 1 boincer umatlas     37140 May 29 06:59 runpilot2-wrapper.sh
[2025-06-05 18:02:15] -rw-r--r-- 1 boincer umatlas       100 Jun  5 16:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 18:02:15] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 16:28 run_atlas
[2025-06-05 18:02:15] -rw-r--r-- 1 boincer umatlas       105 Jun  5 16:28 job.xml
[2025-06-05 18:02:15] -rw-r--r-- 2 boincer umatlas 223023597 Jun  5 16:28 EVNT.44871834._002852.pool.root.1
[2025-06-05 18:02:15] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 16:28 start_atlas.sh
[2025-06-05 18:02:15] drwxrwx--x 2 boincer umatlas      4096 Jun  5 16:28 shared
[2025-06-05 18:02:15] -rw-r--r-- 2 boincer umatlas    508877 Jun  5 16:28 input.tar.gz
[2025-06-05 18:02:15] -rw-r--r-- 1 boincer umatlas         0 Jun  5 16:28 boinc_lockfile
[2025-06-05 18:02:15] -rw-r--r-- 1 boincer umatlas      2557 Jun  5 16:28 pandaJob.out
[2025-06-05 18:02:15] -rw------- 1 boincer umatlas    987599 Jun  5 16:28 agis_schedconf.cvmfs.json
[2025-06-05 18:02:15] -rw------- 1 boincer umatlas   1598969 Jun  5 16:28 agis_ddmendpoints.agis.ALL.json
[2025-06-05 18:02:15] drwx------ 4 boincer umatlas      4096 Jun  5 16:28 pilot3
[2025-06-05 18:02:15] -rw-r--r-- 1 boincer umatlas      5866 Jun  5 18:00 init_data.xml
[2025-06-05 18:02:15] -rw------- 1 boincer umatlas        95 Jun  5 18:01 pilot_heartbeat.json
[2025-06-05 18:02:15] -rw------- 1 boincer umatlas 200679992 Jun  5 18:01 HITS.44871837._099207.pool.root.1
[2025-06-05 18:02:15] -rw------- 1 boincer umatlas      1048 Jun  5 18:01 memory_monitor_summary.json
[2025-06-05 18:02:15] -rw------- 1 boincer umatlas    360303 Jun  5 18:01 log.44871837._099207.job.log.tgz.1
[2025-06-05 18:02:15] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 18:01 boinc_mmap_file
[2025-06-05 18:02:15] -rw-r--r-- 1 boincer umatlas        27 Jun  5 18:01 wrapper_checkpoint.txt
[2025-06-05 18:02:15] -rw-r--r-- 1 boincer umatlas       529 Jun  5 18:01 boinc_task_state.xml
[2025-06-05 18:02:15] -rw------- 1 boincer umatlas      7753 Jun  5 18:01 heartbeat.json
[2025-06-05 18:02:15] -rw------- 1 boincer umatlas      4548 Jun  5 18:02 pilotlog.txt
[2025-06-05 18:02:15] -rw------- 1 boincer umatlas    524297 Jun  5 18:02 log.44871837._099207.job.log.1
[2025-06-05 18:02:15] -rw------- 1 boincer umatlas       357 Jun  5 18:02 output.list
[2025-06-05 18:02:15] -rw-r--r-- 1 boincer umatlas       620 Jun  5 18:02 runtime_log
[2025-06-05 18:02:15] -rw------- 1 boincer umatlas    901120 Jun  5 18:02 result.tar.gz
[2025-06-05 18:02:15] -rw-r--r-- 1 boincer umatlas      8656 Jun  5 18:02 runtime_log.err
[2025-06-05 18:02:15] -rw------- 1 boincer umatlas       658 Jun  5 18:02 lD2NDmAAqe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcPeKDmU6G7im.diag
[2025-06-05 18:02:15] -rw-r--r-- 1 boincer umatlas     21489 Jun  5 18:02 stderr.txt
[2025-06-05 18:02:15] HITS file was successfully produced:
[2025-06-05 18:02:15] -rw------- 1 boincer umatlas 200679992 Jun  5 18:01 shared/HITS.pool.root.1
[2025-06-05 18:02:15]  *** Contents of shared directory: ***
[2025-06-05 18:02:15] total 415180
[2025-06-05 18:02:15] -rw-r--r-- 2 boincer umatlas 223023597 Jun  5 16:28 ATLAS.root_0
[2025-06-05 18:02:15] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 16:28 start_atlas.sh
[2025-06-05 18:02:15] -rw-r--r-- 2 boincer umatlas    508877 Jun  5 16:28 input.tar.gz
[2025-06-05 18:02:15] -rw------- 1 boincer umatlas 200679992 Jun  5 18:01 HITS.pool.root.1
[2025-06-05 18:02:15] -rw------- 1 boincer umatlas    901120 Jun  5 18:02 result.tar.gz
18:02:16 (22395): run_atlas exited; CPU time 61075.612781
18:02:16 (22395): called boinc_finish(0)

</stderr_txt>
]]>

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