Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:20:27 (136064): wrapper (7.7.26015): starting
16:20:27 (136064): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 16:20:27] Arguments: --nthreads 12
[2025-06-05 16:20:27] Threads: 12
[2025-06-05 16:20:27] Checking for CVMFS
[2025-06-05 16:20:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 16:20:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 16:20:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 16:20:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 16:20:27] 2.12.6.0 32194 2728 154980 146831 3 22 28874071 32935936 12505 16776704 0 11133008 99.686 7751205 37554 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 16:20:27] CVMFS is ok
[2025-06-05 16:20:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 16:20:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 16:20:27] Further information can be found at the LHC@home message board.
[2025-06-05 16:20:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 16:20:27] Checking for apptainer binary...
[2025-06-05 16:20:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 16:20:27] Running /usr/bin/apptainer --version
[2025-06-05 16:20:27] apptainer version 1.4.1-1.el9
[2025-06-05 16:20:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 16:20:27] c6-1-24-4.aglt2.org
[2025-06-05 16:20:27] apptainer works
[2025-06-05 16:20:27] Set ATHENA_PROC_NUMBER=12
[2025-06-05 16:20:27] Set ATHENA_CORE_NUMBER=12
[2025-06-05 16:20:27] Starting ATLAS job with PandaID=6678014591
[2025-06-05 16:20:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 17:32:59]  *** The last 200 lines of the pilot log: ***
[2025-06-05 17:32:59]  protocol_id=None
[2025-06-05 17:32:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 17:32:59]  replicas=None
[2025-06-05 17:32:59]  scope=mc23_13p6TeV
[2025-06-05 17:32:59]  status=None
[2025-06-05 17:32:59]  status_code=0
[2025-06-05 17:32:59]  storage_token=
[2025-06-05 17:32:59]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678014591/log.45006595._044194.job.log.tgz.1
[2025-06-05 17:32:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f3/26/log.45006595._044194.job.log.tgz.1
[2025-06-05 17:32:59]  workdir=None
[2025-06-05 17:32:59] ]
[2025-06-05 17:32:59] 2025-06-05 21:32:31,391 | INFO     | transferring file log.45006595._044194.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678014591/log.45006595._044194.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 17:32:59] 2025-06-05 21:32:31,392 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678014591/log.45006595._044194.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._044194.job
[2025-06-05 17:32:59] 2025-06-05 21:32:31,410 | INFO     | adding to output.list: log.45006595._044194.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f3/26/log.45006595._044194.job.log.tg
[2025-06-05 17:32:59] 2025-06-05 21:32:31,411 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 17:32:59] 2025-06-05 21:32:31,411 | INFO     | summary of transferred files:
[2025-06-05 17:32:59] 2025-06-05 21:32:31,411 | INFO     |  -- lfn=log.45006595._044194.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 17:32:59] 2025-06-05 21:32:31,411 | INFO     | stage-out finished correctly
[2025-06-05 17:32:59] 2025-06-05 21:32:32,604 | INFO     | monitor loop #311: job 0:6678014591 is in state 'finished'
[2025-06-05 17:32:59] 2025-06-05 21:32:32,604 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:32:59] 2025-06-05 21:32:33,370 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 17:32:59] 2025-06-05 21:32:35,107 | INFO     | monitor loop #312: job 0:6678014591 is in state 'finished'
[2025-06-05 17:32:59] 2025-06-05 21:32:35,108 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:32:59] 2025-06-05 21:32:36,077 | INFO     | job 6678014591 has state=finished
[2025-06-05 17:32:59] 2025-06-05 21:32:36,078 | INFO     | preparing for final server update for job 6678014591 in state='finished'
[2025-06-05 17:32:59] 2025-06-05 21:32:36,078 | INFO     | this job has now completed (state=finished)
[2025-06-05 17:32:59] 2025-06-05 21:32:36,078 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 17:32:59] 2025-06-05 21:32:36,078 | INFO     | log transfer has been attempted: DONE
[2025-06-05 17:32:59] 2025-06-05 21:32:36,078 | INFO     | job 6678014591 has finished - writing final server update
[2025-06-05 17:32:59] 2025-06-05 21:32:36,079 | INFO     | total number of processed events: 400 (read)
[2025-06-05 17:32:59] 2025-06-05 21:32:36,094 | INFO     | executing command: lscpu
[2025-06-05 17:32:59] 2025-06-05 21:32:36,140 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 17:32:59] 2025-06-05 21:32:37,610 | INFO     | monitor loop #313: job 0:6678014591 is in state 'finished'
[2025-06-05 17:32:59] 2025-06-05 21:32:37,611 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:32:59] 2025-06-05 21:32:40,114 | INFO     | monitor loop #314: job 0:6678014591 is in state 'finished'
[2025-06-05 17:32:59] 2025-06-05 21:32:40,114 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:32:59] 2025-06-05 21:32:40,176 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 17:32:59] 2025-06-05 21:32:40,177 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678014591/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 17:32:59] 2025-06-05 21:32:40,178 | INFO     | extracted standard info from prmon json
[2025-06-05 17:32:59] 2025-06-05 21:32:40,178 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 17:32:59] 2025-06-05 21:32:40,178 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 17:32:59] 2025-06-05 21:32:40,178 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 17:32:59] 2025-06-05 21:32:40,178 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 17:32:59] 2025-06-05 21:32:40,180 | INFO     | fitting pss+swap vs Time
[2025-06-05 17:32:59] 2025-06-05 21:32:40,180 | INFO     | sum of square deviations: 81266640.0
[2025-06-05 17:32:59] 2025-06-05 21:32:40,180 | INFO     | sum of deviations: -6972496511.5
[2025-06-05 17:32:59] 2025-06-05 21:32:40,181 | INFO     | mean x: 1749157091.5
[2025-06-05 17:32:59] 2025-06-05 21:32:40,181 | INFO     | mean y: 2664575.140625
[2025-06-05 17:32:59] 2025-06-05 21:32:40,181 | INFO     | -- intersect: 150076442924.40222
[2025-06-05 17:32:59] 2025-06-05 21:32:40,181 | INFO     | intersect: 150076442924.40222
[2025-06-05 17:32:59] 2025-06-05 21:32:40,181 | INFO     | chi2: 0.20200693196921035
[2025-06-05 17:32:59] 2025-06-05 21:32:40,181 | INFO     | -- intersect: 150076442924.40222
[2025-06-05 17:32:59] 2025-06-05 21:32:40,181 | INFO     | current memory leak: -85.80 B/s (using 64 data points, chi2=0.20)
[2025-06-05 17:32:59] 2025-06-05 21:32:40,181 | INFO     | ..............................
[2025-06-05 17:32:59] 2025-06-05 21:32:40,182 | INFO     | . Timing measurements:
[2025-06-05 17:32:59] 2025-06-05 21:32:40,182 | INFO     | . get job = 0 s
[2025-06-05 17:32:59] 2025-06-05 21:32:40,182 | INFO     | . initial setup = 2 s
[2025-06-05 17:32:59] 2025-06-05 21:32:40,182 | INFO     | . payload setup = 6 s
[2025-06-05 17:32:59] 2025-06-05 21:32:40,182 | INFO     | . stage-in = 0 s
[2025-06-05 17:32:59] 2025-06-05 21:32:40,182 | INFO     | . payload execution = 4286 s
[2025-06-05 17:32:59] 2025-06-05 21:32:40,182 | INFO     | . stage-out = 0 s
[2025-06-05 17:32:59] 2025-06-05 21:32:40,182 | INFO     | . log creation = 0 s
[2025-06-05 17:32:59] 2025-06-05 21:32:40,182 | INFO     | ..............................
[2025-06-05 17:32:59] 2025-06-05 21:32:40,260 | INFO     | 
[2025-06-05 17:32:59] 2025-06-05 21:32:40,260 | INFO     | job summary report
[2025-06-05 17:32:59] 2025-06-05 21:32:40,261 | INFO     | --------------------------------------------------
[2025-06-05 17:32:59] 2025-06-05 21:32:40,261 | INFO     | PanDA job id: 6678014591
[2025-06-05 17:32:59] 2025-06-05 21:32:40,261 | INFO     | task id: 45006595
[2025-06-05 17:32:59] 2025-06-05 21:32:40,261 | INFO     | errors: (none)
[2025-06-05 17:32:59] 2025-06-05 21:32:40,261 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 17:32:59] 2025-06-05 21:32:40,261 | INFO     | pilot state: finished 
[2025-06-05 17:32:59] 2025-06-05 21:32:40,261 | INFO     | transexitcode: 0
[2025-06-05 17:32:59] 2025-06-05 21:32:40,261 | INFO     | exeerrorcode: 0
[2025-06-05 17:32:59] 2025-06-05 21:32:40,261 | INFO     | exeerrordiag: 
[2025-06-05 17:32:59] 2025-06-05 21:32:40,261 | INFO     | exitcode: 0
[2025-06-05 17:32:59] 2025-06-05 21:32:40,261 | INFO     | exitmsg: OK
[2025-06-05 17:32:59] 2025-06-05 21:32:40,261 | INFO     | cpuconsumptiontime: 34279 s
[2025-06-05 17:32:59] 2025-06-05 21:32:40,261 | INFO     | nevents: 400
[2025-06-05 17:32:59] 2025-06-05 21:32:40,261 | INFO     | neventsw: 0
[2025-06-05 17:32:59] 2025-06-05 21:32:40,261 | INFO     | pid: 146751
[2025-06-05 17:32:59] 2025-06-05 21:32:40,261 | INFO     | pgrp: 146751
[2025-06-05 17:32:59] 2025-06-05 21:32:40,261 | INFO     | corecount: 12
[2025-06-05 17:32:59] 2025-06-05 21:32:40,262 | INFO     | event service: False
[2025-06-05 17:32:59] 2025-06-05 21:32:40,262 | INFO     | sizes: {0: 2397342, 4: 2397548, 11: 2397576, 4297: 2423575, 4299: 2432516, 4301: 2432572, 4307: 2432870}
[2025-06-05 17:32:59] 2025-06-05 21:32:40,262 | INFO     | --------------------------------------------------
[2025-06-05 17:32:59] 2025-06-05 21:32:40,262 | INFO     | 
[2025-06-05 17:32:59] 2025-06-05 21:32:40,262 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 17:32:59] 2025-06-05 21:32:40,282 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 17:32:59] 2025-06-05 21:32:40,283 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 17:32:59] 2025-06-05 21:32:40,283 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 17:32:59] 2025-06-05 21:32:40,283 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 17:32:59] 2025-06-05 21:32:40,283 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 17:32:59] 2025-06-05 21:32:40,283 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 17:32:59] 2025-06-05 21:32:40,283 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 17:32:59] 2025-06-05 21:32:40,283 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 17:32:59] 2025-06-05 21:32:40,283 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 17:32:59] 2025-06-05 21:32:40,283 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 17:32:59] 2025-06-05 21:32:40,283 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 17:32:59] 2025-06-05 21:32:40,283 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 17:32:59] 2025-06-05 21:32:40,284 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 17:32:59] 2025-06-05 21:32:40,284 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 17:32:59] 2025-06-05 21:32:40,284 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 17:32:59] 2025-06-05 21:32:40,284 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 17:32:59] 2025-06-05 21:32:40,284 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 17:32:59] 2025-06-05 21:32:40,284 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 17:32:59] 2025-06-05 21:32:40,284 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 17:32:59] 2025-06-05 21:32:40,284 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 17:32:59] 2025-06-05 21:32:40,284 | INFO     | job 6678014591 has completed (purged errors)
[2025-06-05 17:32:59] 2025-06-05 21:32:40,284 | INFO     | overall cleanup function is called
[2025-06-05 17:32:59] 2025-06-05 21:32:41,100 | INFO     | PID=139658 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-05 17:32:59] 2025-06-05 21:32:41,100 | INFO     | .. there are 13 such processes running
[2025-06-05 17:32:59] 2025-06-05 21:32:41,293 | INFO     | --- collectZombieJob: --- 10, [146751]
[2025-06-05 17:32:59] 2025-06-05 21:32:41,293 | INFO     | zombie collector waiting for pid 146751
[2025-06-05 17:32:59] 2025-06-05 21:32:41,294 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 17:32:59] 2025-06-05 21:32:41,294 | INFO     | collected zombie processes
[2025-06-05 17:32:59] 2025-06-05 21:32:41,294 | INFO     | will attempt to kill all subprocesses of pid=146751
[2025-06-05 17:32:59] 2025-06-05 21:32:41,529 | INFO     | process IDs to be killed: [146751] (in reverse order)
[2025-06-05 17:32:59] 2025-06-05 21:32:41,623 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 17:32:59] 2025-06-05 21:32:41,623 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 17:32:59] 2025-06-05 21:32:41,635 | INFO     | did not find any defunct processes belonging to 146751
[2025-06-05 17:32:59] 2025-06-05 21:32:41,649 | INFO     | did not find any defunct processes belonging to 146751
[2025-06-05 17:32:59] 2025-06-05 21:32:41,652 | INFO     | ready for new job
[2025-06-05 17:32:59] 2025-06-05 21:32:41,652 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 17:32:59] 2025-06-05 21:32:41,656 | INFO     | **************************************
[2025-06-05 17:32:59] 2025-06-05 21:32:41,656 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 17:32:59] 2025-06-05 21:32:41,656 | INFO     | **************************************
[2025-06-05 17:32:59] 2025-06-05 21:32:41,656 | INFO     | 
[2025-06-05 17:32:59] 2025-06-05 21:32:41,673 | INFO     | architecture information:
[2025-06-05 17:32:59] 2025-06-05 21:32:41,673 | INFO     | executing command: cat /etc/os-release
[2025-06-05 17:32:59] 2025-06-05 21:32:41,690 | INFO     | cat /etc/os-release:
[2025-06-05 17:32:59] NAME="CentOS Linux"
[2025-06-05 17:32:59] VERSION="7 (Core)"
[2025-06-05 17:32:59] ID="centos"
[2025-06-05 17:32:59] ID_LIKE="rhel fedora"
[2025-06-05 17:32:59] VERSION_ID="7"
[2025-06-05 17:32:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 17:32:59] ANSI_COLOR="0;31"
[2025-06-05 17:32:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 17:32:59] HOME_URL="https://www.centos.org/"
[2025-06-05 17:32:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 17:32:59] 
[2025-06-05 17:32:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 17:32:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 17:32:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 17:32:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 17:32:59] 
[2025-06-05 17:32:59] 2025-06-05 21:32:41,691 | INFO     | **************************************
[2025-06-05 17:32:59] 2025-06-05 21:32:42,194 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 17:32:59] 2025-06-05 21:32:42,210 | INFO     | sufficient remaining disk space (76508299264 B)
[2025-06-05 17:32:59] 2025-06-05 21:32:42,210 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 17:32:59] 2025-06-05 21:32:42,211 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 17:32:59] 2025-06-05 21:32:42,211 | INFO     | update_server=False
[2025-06-05 17:32:59] 2025-06-05 21:32:42,211 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 17:32:59] 2025-06-05 21:32:42,211 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:32:59] 2025-06-05 21:32:42,211 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 17:32:59] 2025-06-05 21:32:42,322 | INFO     | all data control threads have been joined
[2025-06-05 17:32:59] 2025-06-05 21:32:42,617 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 17:32:59] 2025-06-05 21:32:42,617 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 17:32:59] 2025-06-05 21:32:42,617 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:32:59] 2025-06-05 21:32:42,617 | INFO     | will abort loop
[2025-06-05 17:32:59] 2025-06-05 21:32:42,729 | INFO     | all job control threads have been joined
[2025-06-05 17:32:59] 2025-06-05 21:32:43,106 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 17:32:59] 2025-06-05 21:32:43,107 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 17:32:59] 2025-06-05 21:32:43,107 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 17:32:59] 2025-06-05 21:32:43,215 | INFO     | [job] retrieve thread has finished
[2025-06-05 17:32:59] 2025-06-05 21:32:43,217 | INFO     | [job] queue monitor thread has finished
[2025-06-05 17:32:59] 2025-06-05 21:32:43,328 | INFO     | [data] control thread has finished
[2025-06-05 17:32:59] 2025-06-05 21:32:43,447 | INFO     | all payload control threads have been joined
[2025-06-05 17:32:59] 2025-06-05 21:32:43,478 | INFO     | [payload] validate_post thread has finished
[2025-06-05 17:32:59] 2025-06-05 21:32:43,484 | INFO     | [data] copytool_in thread has finished
[2025-06-05 17:32:59] 2025-06-05 21:32:43,622 | INFO     | [job] job monitor thread has finished
[2025-06-05 17:32:59] 2025-06-05 21:32:43,639 | INFO     | [job] validate thread has finished
[2025-06-05 17:32:59] 2025-06-05 21:32:43,735 | INFO     | [job] control thread has finished
[2025-06-05 17:32:59] 2025-06-05 21:32:43,964 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 17:32:59] 2025-06-05 21:32:44,072 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 17:32:59] 2025-06-05 21:32:44,073 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 17:32:59] 2025-06-05 21:32:44,166 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 17:32:59] 2025-06-05 21:32:44,216 | INFO     | [data] copytool_out thread has finished
[2025-06-05 17:32:59] 2025-06-05 21:32:44,452 | INFO     | [payload] control thread has finished
[2025-06-05 17:32:59] 2025-06-05 21:32:44,543 | INFO     | [payload] failed_post thread has finished
[2025-06-05 17:32:59] 2025-06-05 21:32:47,971 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 17:32:59] 2025-06-05 21:32:52,499 | INFO     | job.realtimelogging is not enabled
[2025-06-05 17:32:59] 2025-06-05 21:32:53,505 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 17:32:59] 2025-06-05 21:32:54,641 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139740567967552)>', '<ExcThread(monitor, started 139739579545344)>']
[2025-06-05 17:32:59] 2025-06-05 21:32:55,169 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 17:32:59] 2025-06-05 21:32:55,169 | INFO     | [monitor] control thread has ended
[2025-06-05 17:32:59] 2025-06-05 21:32:59,653 | INFO     | all workflow threads have been joined
[2025-06-05 17:32:59] 2025-06-05 21:32:59,653 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 17:32:59] 2025-06-05 21:32:59,654 | INFO     | traces error code: 0
[2025-06-05 17:32:59] 2025-06-05 21:32:59,654 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 17:32:59] 2025-06-05 21:32:59,827 [wrapper] ==== pilot stdout END ====
[2025-06-05 17:32:59] 2025-06-05 21:32:59,829 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 17:32:59] 2025-06-05 21:32:59,831 [wrapper] pilotpid: 139658
[2025-06-05 17:32:59] 2025-06-05 21:32:59,834 [wrapper] Pilot exit status: 0
[2025-06-05 17:32:59] 2025-06-05 21:32:59,846 [wrapper] pandaids: 6678014591
[2025-06-05 17:32:59] 2025-06-05 21:32:59,904 [wrapper] cleanup supervisor_pilot  301912 139659
[2025-06-05 17:32:59] 2025-06-05 21:32:59,907 [wrapper] Test setup, not cleaning
[2025-06-05 17:32:59] 2025-06-05 21:32:59,910 [wrapper] apfmon messages muted
[2025-06-05 17:32:59] 2025-06-05 21:32:59,913 [wrapper] ==== wrapper stdout END ====
[2025-06-05 17:32:59] 2025-06-05 21:32:59,916 [wrapper] ==== wrapper stderr END ====
[2025-06-05 17:32:59]  *** Error codes and diagnostics ***
[2025-06-05 17:32:59]     "exeErrorCode": 0,
[2025-06-05 17:32:59]     "exeErrorDiag": "",
[2025-06-05 17:32:59]     "pilotErrorCode": 0,
[2025-06-05 17:32:59]     "pilotErrorDiag": "",
[2025-06-05 17:32:59]  *** Listing of results directory ***
[2025-06-05 17:32:59] total 395960
[2025-06-05 17:32:59] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 15:41 pilot3.tar.gz
[2025-06-05 17:32:59] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 15:57 queuedata.json
[2025-06-05 17:32:59] -rwx------. 1 boincer umatlas     37140 Jun  3 15:57 runpilot2-wrapper.sh
[2025-06-05 17:32:59] -rw-r--r--. 1 boincer umatlas       100 Jun  5 16:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 17:32:59] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 16:20 run_atlas
[2025-06-05 17:32:59] -rw-r--r--. 1 boincer umatlas       105 Jun  5 16:20 job.xml
[2025-06-05 17:32:59] -rw-r--r--. 2 boincer umatlas 214401212 Jun  5 16:20 EVNT.45006593._001771.pool.root.1
[2025-06-05 17:32:59] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 16:20 start_atlas.sh
[2025-06-05 17:32:59] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 16:20 shared
[2025-06-05 17:32:59] -rw-r--r--. 2 boincer umatlas    508877 Jun  5 16:20 input.tar.gz
[2025-06-05 17:32:59] -rw-r--r--. 1 boincer umatlas         0 Jun  5 16:20 boinc_lockfile
[2025-06-05 17:32:59] -rw-r--r--. 1 boincer umatlas      2525 Jun  5 16:20 pandaJob.out
[2025-06-05 17:32:59] -rw-------. 1 boincer umatlas    987599 Jun  5 16:20 agis_schedconf.cvmfs.json
[2025-06-05 17:32:59] -rw-------. 1 boincer umatlas   1598969 Jun  5 16:20 agis_ddmendpoints.agis.ALL.json
[2025-06-05 17:32:59] drwx------. 4 boincer umatlas      4096 Jun  5 16:20 pilot3
[2025-06-05 17:32:59] -rw-r--r--. 1 boincer umatlas      6839 Jun  5 17:30 init_data.xml
[2025-06-05 17:32:59] -rw-------. 1 boincer umatlas 185665476 Jun  5 17:31 HITS.45006595._044194.pool.root.1
[2025-06-05 17:32:59] -rw-r--r--. 1 boincer umatlas       529 Jun  5 17:31 boinc_task_state.xml
[2025-06-05 17:32:59] -rw-------. 1 boincer umatlas        95 Jun  5 17:32 pilot_heartbeat.json
[2025-06-05 17:32:59] -rw-------. 1 boincer umatlas      1051 Jun  5 17:32 memory_monitor_summary.json
[2025-06-05 17:32:59] -rw-------. 1 boincer umatlas    353210 Jun  5 17:32 log.45006595._044194.job.log.tgz.1
[2025-06-05 17:32:59] -rw-------. 1 boincer umatlas      7715 Jun  5 17:32 heartbeat.json
[2025-06-05 17:32:59] -rw-r--r--. 1 boincer umatlas        27 Jun  5 17:32 wrapper_checkpoint.txt
[2025-06-05 17:32:59] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 17:32 boinc_mmap_file
[2025-06-05 17:32:59] -rw-------. 1 boincer umatlas      4611 Jun  5 17:32 pilotlog.txt
[2025-06-05 17:32:59] -rw-------. 1 boincer umatlas    426156 Jun  5 17:32 log.45006595._044194.job.log.1
[2025-06-05 17:32:59] -rw-------. 1 boincer umatlas       357 Jun  5 17:32 output.list
[2025-06-05 17:32:59] -rw-r--r--. 1 boincer umatlas       620 Jun  5 17:32 runtime_log
[2025-06-05 17:32:59] -rw-------. 1 boincer umatlas    798720 Jun  5 17:32 result.tar.gz
[2025-06-05 17:32:59] -rw-r--r--. 1 boincer umatlas      8666 Jun  5 17:32 runtime_log.err
[2025-06-05 17:32:59] -rw-------. 1 boincer umatlas       654 Jun  5 17:32 RCsMDmRwmg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRxlKDmOeCw2m.diag
[2025-06-05 17:32:59] -rw-r--r--. 1 boincer umatlas     21766 Jun  5 17:32 stderr.txt
[2025-06-05 17:32:59] HITS file was successfully produced:
[2025-06-05 17:32:59] -rw-------. 1 boincer umatlas 185665476 Jun  5 17:31 shared/HITS.pool.root.1
[2025-06-05 17:32:59]  *** Contents of shared directory: ***
[2025-06-05 17:33:00] total 391996
[2025-06-05 17:33:00] -rw-r--r--. 2 boincer umatlas 214401212 Jun  5 16:20 ATLAS.root_0
[2025-06-05 17:33:00] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 16:20 start_atlas.sh
[2025-06-05 17:33:00] -rw-r--r--. 2 boincer umatlas    508877 Jun  5 16:20 input.tar.gz
[2025-06-05 17:33:00] -rw-------. 1 boincer umatlas 185665476 Jun  5 17:31 HITS.pool.root.1
[2025-06-05 17:33:00] -rw-------. 1 boincer umatlas    798720 Jun  5 17:32 result.tar.gz
17:33:01 (136064): run_atlas exited; CPU time 34321.447588
17:33:01 (136064): called boinc_finish(0)

</stderr_txt>
]]>

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