Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:20:21 (3968): wrapper (7.7.26015): starting
16:20:21 (3968): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 16:20:21] Arguments: --nthreads 8
[2025-06-05 16:20:21] Threads: 8
[2025-06-05 16:20:21] Checking for CVMFS
[2025-06-05 16:20:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 16:20:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 16:20:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 16:20:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 16:20:22] 2.11.2.0 2931 37546 79148 146831 2 1 19056502 20275201 1 130560 0 11845590 99.976 6956484 8429 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 16:20:22] CVMFS is ok
[2025-06-05 16:20:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 16:20:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 16:20:22] Further information can be found at the LHC@home message board.
[2025-06-05 16:20:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 16:20:22] Checking for apptainer binary...
[2025-06-05 16:20:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 16:20:22] Running /usr/bin/apptainer --version
[2025-06-05 16:20:22] apptainer version 1.3.2-1.el7
[2025-06-05 16:20:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 16:20:24] c-115-5.aglt2.org
[2025-06-05 16:20:24] apptainer works
[2025-06-05 16:20:24] Set ATHENA_PROC_NUMBER=8
[2025-06-05 16:20:24] Set ATHENA_CORE_NUMBER=8
[2025-06-05 16:20:24] Starting ATLAS job with PandaID=6677383803
[2025-06-05 16:20:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 18:02:05]  *** The last 200 lines of the pilot log: ***
[2025-06-05 18:02:05]  status_code=0
[2025-06-05 18:02:05]  storage_token=
[2025-06-05 18:02:05]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677383803/log.45006595._003740.job.log.tgz.1
[2025-06-05 18:02:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/17/96/log.45006595._003740.job.log.tgz.1
[2025-06-05 18:02:05]  workdir=None
[2025-06-05 18:02:05] ]
[2025-06-05 18:02:05] 2025-06-05 22:01:38,681 | INFO     | transferring file log.45006595._003740.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677383803/log.45006595._003740.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 18:02:05] 2025-06-05 22:01:38,682 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677383803/log.45006595._003740.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._003740.job
[2025-06-05 18:02:05] 2025-06-05 22:01:38,707 | INFO     | adding to output.list: log.45006595._003740.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/17/96/log.45006595._003740.job.log.tg
[2025-06-05 18:02:05] 2025-06-05 22:01:38,708 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 18:02:05] 2025-06-05 22:01:38,709 | INFO     | summary of transferred files:
[2025-06-05 18:02:05] 2025-06-05 22:01:38,709 | INFO     |  -- lfn=log.45006595._003740.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 18:02:05] 2025-06-05 22:01:38,710 | INFO     | stage-out finished correctly
[2025-06-05 18:02:05] 2025-06-05 22:01:39,376 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 18:02:05] 2025-06-05 22:01:39,483 | INFO     | job 6677383803 has state=finished
[2025-06-05 18:02:05] 2025-06-05 22:01:39,483 | INFO     | preparing for final server update for job 6677383803 in state='finished'
[2025-06-05 18:02:05] 2025-06-05 22:01:39,484 | INFO     | this job has now completed (state=finished)
[2025-06-05 18:02:05] 2025-06-05 22:01:39,484 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 18:02:05] 2025-06-05 22:01:39,484 | INFO     | log transfer has been attempted: DONE
[2025-06-05 18:02:05] 2025-06-05 22:01:39,485 | INFO     | job 6677383803 has finished - writing final server update
[2025-06-05 18:02:05] 2025-06-05 22:01:39,485 | INFO     | total number of processed events: 400 (read)
[2025-06-05 18:02:05] 2025-06-05 22:01:39,487 | INFO     | executing command: lscpu
[2025-06-05 18:02:05] 2025-06-05 22:01:39,515 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 18:02:05] 2025-06-05 22:01:41,294 | WARNING  | process 14175 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 18:02:05] 2025-06-05 22:01:41,294 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677383803/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 18:02:05] 2025-06-05 22:01:41,295 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677383803/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 18:02:05] 2025-06-05 22:01:41,296 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3298411 B
[2025-06-05 18:02:05] 2025-06-05 22:01:41,296 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15783 B
[2025-06-05 18:02:05] 2025-06-05 22:01:41,297 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 18:02:05] 2025-06-05 22:01:44,403 | INFO     | PID=7641 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-05 18:02:05] 2025-06-05 22:01:45,138 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 18:02:05] 2025-06-05 22:01:45,139 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677383803/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 18:02:05] 2025-06-05 22:01:45,145 | INFO     | extracted standard info from prmon json
[2025-06-05 18:02:05] 2025-06-05 22:01:45,145 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 18:02:05] 2025-06-05 22:01:45,146 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 18:02:05] 2025-06-05 22:01:45,146 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 18:02:05] 2025-06-05 22:01:45,147 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 18:02:05] 2025-06-05 22:01:45,149 | INFO     | fitting pss+swap vs Time
[2025-06-05 18:02:05] 2025-06-05 22:01:45,150 | INFO     | sum of square deviations: 241429643.0
[2025-06-05 18:02:05] 2025-06-05 22:01:45,151 | INFO     | sum of deviations: -17476587840.000004
[2025-06-05 18:02:05] 2025-06-05 22:01:45,151 | INFO     | mean x: 1749157954.5
[2025-06-05 18:02:05] 2025-06-05 22:01:45,151 | INFO     | mean y: 2643806.086956522
[2025-06-05 18:02:05] 2025-06-05 22:01:45,151 | INFO     | -- intersect: 126620536530.44467
[2025-06-05 18:02:05] 2025-06-05 22:01:45,151 | INFO     | intersect: 126620536530.44467
[2025-06-05 18:02:05] 2025-06-05 22:01:45,152 | INFO     | chi2: 0.08179091573986204
[2025-06-05 18:02:05] 2025-06-05 22:01:45,152 | INFO     | -- intersect: 126620536530.44467
[2025-06-05 18:02:05] 2025-06-05 22:01:45,152 | INFO     | current memory leak: -72.39 B/s (using 92 data points, chi2=0.08)
[2025-06-05 18:02:05] 2025-06-05 22:01:45,153 | INFO     | ..............................
[2025-06-05 18:02:05] 2025-06-05 22:01:45,153 | INFO     | . Timing measurements:
[2025-06-05 18:02:05] 2025-06-05 22:01:45,153 | INFO     | . get job = 0 s
[2025-06-05 18:02:05] 2025-06-05 22:01:45,153 | INFO     | . initial setup = 2 s
[2025-06-05 18:02:05] 2025-06-05 22:01:45,153 | INFO     | . payload setup = 11 s
[2025-06-05 18:02:05] 2025-06-05 22:01:45,153 | INFO     | . stage-in = 0 s
[2025-06-05 18:02:05] 2025-06-05 22:01:45,153 | INFO     | . payload execution = 6025 s
[2025-06-05 18:02:05] 2025-06-05 22:01:45,154 | INFO     | . stage-out = 0 s
[2025-06-05 18:02:05] 2025-06-05 22:01:45,154 | INFO     | . log creation = 0 s
[2025-06-05 18:02:05] 2025-06-05 22:01:45,154 | INFO     | ..............................
[2025-06-05 18:02:05] 2025-06-05 22:01:45,175 | INFO     | sufficient remaining disk space (18635292672 B)
[2025-06-05 18:02:05] 2025-06-05 22:01:45,186 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-05 18:02:05] 2025-06-05 22:01:45,248 | INFO     | 
[2025-06-05 18:02:05] 2025-06-05 22:01:45,248 | INFO     | job summary report
[2025-06-05 18:02:05] 2025-06-05 22:01:45,248 | INFO     | --------------------------------------------------
[2025-06-05 18:02:05] 2025-06-05 22:01:45,249 | INFO     | PanDA job id: 6677383803
[2025-06-05 18:02:05] 2025-06-05 22:01:45,249 | INFO     | task id: 45006595
[2025-06-05 18:02:05] 2025-06-05 22:01:45,249 | INFO     | errors: (none)
[2025-06-05 18:02:05] 2025-06-05 22:01:45,249 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 18:02:05] 2025-06-05 22:01:45,250 | INFO     | pilot state: finished 
[2025-06-05 18:02:05] 2025-06-05 22:01:45,250 | INFO     | transexitcode: 0
[2025-06-05 18:02:05] 2025-06-05 22:01:45,250 | INFO     | exeerrorcode: 0
[2025-06-05 18:02:05] 2025-06-05 22:01:45,250 | INFO     | exeerrordiag: 
[2025-06-05 18:02:05] 2025-06-05 22:01:45,250 | INFO     | exitcode: 0
[2025-06-05 18:02:05] 2025-06-05 22:01:45,251 | INFO     | exitmsg: OK
[2025-06-05 18:02:05] 2025-06-05 22:01:45,251 | INFO     | cpuconsumptiontime: 45066 s
[2025-06-05 18:02:05] 2025-06-05 22:01:45,251 | INFO     | nevents: 400
[2025-06-05 18:02:05] 2025-06-05 22:01:45,251 | INFO     | neventsw: 0
[2025-06-05 18:02:05] 2025-06-05 22:01:45,252 | INFO     | pid: 14175
[2025-06-05 18:02:05] 2025-06-05 22:01:45,252 | INFO     | pgrp: 14175
[2025-06-05 18:02:05] 2025-06-05 22:01:45,252 | INFO     | corecount: 8
[2025-06-05 18:02:05] 2025-06-05 22:01:45,252 | INFO     | event service: False
[2025-06-05 18:02:05] 2025-06-05 22:01:45,252 | INFO     | sizes: {0: 2397164, 1: 2397363, 7: 2397569, 12: 2397597, 6040: 2424167, 6041: 2424166, 6042: 2433291, 6043: 2433347, 6048: 2433517}
[2025-06-05 18:02:05] 2025-06-05 22:01:45,253 | INFO     | --------------------------------------------------
[2025-06-05 18:02:05] 2025-06-05 22:01:45,253 | INFO     | 
[2025-06-05 18:02:05] 2025-06-05 22:01:45,253 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 18:02:05] 2025-06-05 22:01:45,257 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6677383803: 3606774 B (within 2537553920 B limit)
[2025-06-05 18:02:05] 2025-06-05 22:01:45,258 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6677383803/HITS.45006595._003740.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-05 18:02:05] 2025-06-05 22:01:45,258 | INFO     | total size of present files: 0 B (workdir size: 3606774 B)
[2025-06-05 18:02:05] 2025-06-05 22:01:45,259 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6677383803/HITS.45006595._003740.pool.root.1 since it does not exist
[2025-06-05 18:02:05] 2025-06-05 22:01:45,281 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 18:02:05] 2025-06-05 22:01:45,281 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 18:02:05] 2025-06-05 22:01:45,282 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 18:02:05] 2025-06-05 22:01:45,282 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 18:02:05] 2025-06-05 22:01:45,282 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 18:02:05] 2025-06-05 22:01:45,282 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 18:02:05] 2025-06-05 22:01:45,282 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 18:02:05] 2025-06-05 22:01:45,283 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 18:02:05] 2025-06-05 22:01:45,283 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 18:02:05] 2025-06-05 22:01:45,283 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 18:02:05] 2025-06-05 22:01:45,283 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 18:02:05] 2025-06-05 22:01:45,283 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 18:02:05] 2025-06-05 22:01:45,283 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 18:02:05] 2025-06-05 22:01:45,284 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 18:02:05] 2025-06-05 22:01:45,284 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 18:02:05] 2025-06-05 22:01:45,284 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 18:02:05] 2025-06-05 22:01:45,284 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 18:02:05] 2025-06-05 22:01:45,284 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 18:02:05] 2025-06-05 22:01:45,285 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 18:02:05] 2025-06-05 22:01:45,285 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 18:02:05] 2025-06-05 22:01:45,285 | INFO     | job 6677383803 has completed (purged errors)
[2025-06-05 18:02:05] 2025-06-05 22:01:45,285 | INFO     | overall cleanup function is called
[2025-06-05 18:02:05] 2025-06-05 22:01:45,353 | INFO     | number of running child processes to parent process 14175: 1
[2025-06-05 18:02:05] 2025-06-05 22:01:45,353 | INFO     | maximum number of monitored processes: 6
[2025-06-05 18:02:05] 2025-06-05 22:01:45,353 | INFO     | aborting job monitoring since job object (job id=6677383803) has expired
[2025-06-05 18:02:05] 2025-06-05 22:01:46,294 | INFO     | --- collectZombieJob: --- 10, [14175]
[2025-06-05 18:02:05] 2025-06-05 22:01:46,294 | INFO     | zombie collector waiting for pid 14175
[2025-06-05 18:02:05] 2025-06-05 22:01:46,295 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 18:02:05] 2025-06-05 22:01:46,295 | INFO     | collected zombie processes
[2025-06-05 18:02:05] 2025-06-05 22:01:46,295 | INFO     | will attempt to kill all subprocesses of pid=14175
[2025-06-05 18:02:05] 2025-06-05 22:01:46,375 | INFO     | process IDs to be killed: [14175] (in reverse order)
[2025-06-05 18:02:05] 2025-06-05 22:01:46,431 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 18:02:05] 2025-06-05 22:01:46,432 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 18:02:05] 2025-06-05 22:01:46,436 | INFO     | did not find any defunct processes belonging to 14175
[2025-06-05 18:02:05] 2025-06-05 22:01:46,439 | INFO     | did not find any defunct processes belonging to 14175
[2025-06-05 18:02:05] 2025-06-05 22:01:46,439 | INFO     | ready for new job
[2025-06-05 18:02:05] 2025-06-05 22:01:46,439 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 18:02:05] 2025-06-05 22:01:46,440 | INFO     | **************************************
[2025-06-05 18:02:05] 2025-06-05 22:01:46,441 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 18:02:05] 2025-06-05 22:01:46,441 | INFO     | **************************************
[2025-06-05 18:02:05] 2025-06-05 22:01:46,441 | INFO     | 
[2025-06-05 18:02:05] 2025-06-05 22:01:46,441 | INFO     | architecture information:
[2025-06-05 18:02:05] 2025-06-05 22:01:46,442 | INFO     | executing command: cat /etc/os-release
[2025-06-05 18:02:05] 2025-06-05 22:01:46,458 | INFO     | cat /etc/os-release:
[2025-06-05 18:02:05] NAME="CentOS Linux"
[2025-06-05 18:02:05] VERSION="7 (Core)"
[2025-06-05 18:02:05] ID="centos"
[2025-06-05 18:02:05] ID_LIKE="rhel fedora"
[2025-06-05 18:02:05] VERSION_ID="7"
[2025-06-05 18:02:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 18:02:05] ANSI_COLOR="0;31"
[2025-06-05 18:02:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 18:02:05] HOME_URL="https://www.centos.org/"
[2025-06-05 18:02:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 18:02:05] 
[2025-06-05 18:02:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 18:02:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 18:02:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 18:02:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 18:02:05] 
[2025-06-05 18:02:05] 2025-06-05 22:01:46,459 | INFO     | **************************************
[2025-06-05 18:02:05] 2025-06-05 22:01:46,962 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 18:02:05] 2025-06-05 22:01:46,982 | INFO     | sufficient remaining disk space (18639486976 B)
[2025-06-05 18:02:05] 2025-06-05 22:01:46,982 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 18:02:05] 2025-06-05 22:01:46,983 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 18:02:05] 2025-06-05 22:01:46,983 | INFO     | update_server=False
[2025-06-05 18:02:05] 2025-06-05 22:01:46,983 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 18:02:05] 2025-06-05 22:01:46,983 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:02:05] 2025-06-05 22:01:46,984 | INFO     | aborting loop
[2025-06-05 18:02:05] 2025-06-05 22:01:46,985 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:02:05] 2025-06-05 22:01:46,984 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 18:02:05] 2025-06-05 22:01:46,984 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 18:02:05] 2025-06-05 22:01:46,985 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 18:02:05] 2025-06-05 22:01:46,986 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 18:02:05] 2025-06-05 22:01:46,986 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 18:02:05] 2025-06-05 22:01:47,056 | INFO     | all data control threads have been joined
[2025-06-05 18:02:05] 2025-06-05 22:01:47,445 | INFO     | all payload control threads have been joined
[2025-06-05 18:02:05] 2025-06-05 22:01:47,986 | INFO     | [job] queue monitor thread has finished
[2025-06-05 18:02:05] 2025-06-05 22:01:47,989 | INFO     | [job] retrieve thread has finished
[2025-06-05 18:02:05] 2025-06-05 22:01:47,990 | INFO     | [job] job monitor thread has finished
[2025-06-05 18:02:05] 2025-06-05 22:01:48,062 | INFO     | [data] control thread has finished
[2025-06-05 18:02:05] 2025-06-05 22:01:48,068 | INFO     | [payload] validate_post thread has finished
[2025-06-05 18:02:05] 2025-06-05 22:01:48,451 | INFO     | [payload] control thread has finished
[2025-06-05 18:02:05] 2025-06-05 22:01:48,528 | INFO     | [payload] failed_post thread has finished
[2025-06-05 18:02:05] 2025-06-05 22:01:48,651 | INFO     | all job control threads have been joined
[2025-06-05 18:02:05] 2025-06-05 22:01:48,885 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 18:02:05] 2025-06-05 22:01:48,916 | INFO     | [job] validate thread has finished
[2025-06-05 18:02:05] 2025-06-05 22:01:48,919 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 18:02:05] 2025-06-05 22:01:48,926 | INFO     | [data] copytool_in thread has finished
[2025-06-05 18:02:05] 2025-06-05 22:01:48,991 | INFO     | [data] copytool_out thread has finished
[2025-06-05 18:02:05] 2025-06-05 22:01:49,246 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 18:02:05] 2025-06-05 22:01:49,657 | INFO     | [job] control thread has finished
[2025-06-05 18:02:05] 2025-06-05 22:01:49,970 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 18:02:05] 2025-06-05 22:01:53,976 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 18:02:05] 2025-06-05 22:01:57,333 | INFO     | job.realtimelogging is not enabled
[2025-06-05 18:02:05] 2025-06-05 22:01:58,339 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 18:02:05] 2025-06-05 22:01:59,722 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140676696446784)>', '<ExcThread(monitor, started 140675655911168)>']
[2025-06-05 18:02:05] 2025-06-05 22:02:00,051 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 18:02:05] 2025-06-05 22:02:00,051 | INFO     | [monitor] control thread has ended
[2025-06-05 18:02:05] 2025-06-05 22:02:04,727 | INFO     | all workflow threads have been joined
[2025-06-05 18:02:05] 2025-06-05 22:02:04,727 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 18:02:05] 2025-06-05 22:02:04,728 | INFO     | traces error code: 0
[2025-06-05 18:02:05] 2025-06-05 22:02:04,728 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 18:02:05] 2025-06-05 22:02:04,846 [wrapper] ==== pilot stdout END ====
[2025-06-05 18:02:05] 2025-06-05 22:02:04,850 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 18:02:05] 2025-06-05 22:02:04,855 [wrapper] pilotpid: 7641
[2025-06-05 18:02:05] 2025-06-05 22:02:04,859 [wrapper] Pilot exit status: 0
[2025-06-05 18:02:05] 2025-06-05 22:02:04,879 [wrapper] pandaids: 6677383803
[2025-06-05 18:02:05] 2025-06-05 22:02:04,923 [wrapper] cleanup supervisor_pilot  5663 7642
[2025-06-05 18:02:05] 2025-06-05 22:02:04,928 [wrapper] Test setup, not cleaning
[2025-06-05 18:02:05] 2025-06-05 22:02:04,933 [wrapper] apfmon messages muted
[2025-06-05 18:02:05] 2025-06-05 22:02:04,938 [wrapper] ==== wrapper stdout END ====
[2025-06-05 18:02:05] 2025-06-05 22:02:04,943 [wrapper] ==== wrapper stderr END ====
[2025-06-05 18:02:05]  *** Error codes and diagnostics ***
[2025-06-05 18:02:05]     "exeErrorCode": 0,
[2025-06-05 18:02:05]     "exeErrorDiag": "",
[2025-06-05 18:02:05]     "pilotErrorCode": 0,
[2025-06-05 18:02:05]     "pilotErrorDiag": "",
[2025-06-05 18:02:05]  *** Listing of results directory ***
[2025-06-05 18:02:05] total 390312
[2025-06-05 18:02:05] -rw-r--r-- 1 boincer umatlas    495897 Jun  2 12:11 pilot3.tar.gz
[2025-06-05 18:02:05] -rw-r--r-- 1 boincer umatlas      5111 Jun  2 12:28 queuedata.json
[2025-06-05 18:02:05] -rwx------ 1 boincer umatlas     37140 Jun  2 12:30 runpilot2-wrapper.sh
[2025-06-05 18:02:05] -rw-r--r-- 1 boincer umatlas       100 Jun  5 16:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 18:02:05] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 16:20 run_atlas
[2025-06-05 18:02:05] -rw-r--r-- 1 boincer umatlas       105 Jun  5 16:20 job.xml
[2025-06-05 18:02:05] -rw-r--r-- 2 boincer umatlas 214451486 Jun  5 16:20 EVNT.45006593._000150.pool.root.1
[2025-06-05 18:02:05] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 16:20 start_atlas.sh
[2025-06-05 18:02:05] drwxrwx--x 2 boincer umatlas      4096 Jun  5 16:20 shared
[2025-06-05 18:02:05] -rw-r--r-- 2 boincer umatlas    508877 Jun  5 16:20 input.tar.gz
[2025-06-05 18:02:05] -rw-r--r-- 1 boincer umatlas         0 Jun  5 16:20 boinc_lockfile
[2025-06-05 18:02:05] -rw-r--r-- 1 boincer umatlas      2521 Jun  5 16:20 pandaJob.out
[2025-06-05 18:02:05] -rw------- 1 boincer umatlas    987599 Jun  5 16:20 agis_schedconf.cvmfs.json
[2025-06-05 18:02:05] -rw------- 1 boincer umatlas   1598969 Jun  5 16:20 agis_ddmendpoints.agis.ALL.json
[2025-06-05 18:02:05] drwx------ 4 boincer umatlas      4096 Jun  5 16:20 pilot3
[2025-06-05 18:02:05] -rw------- 1 boincer umatlas        95 Jun  5 18:01 pilot_heartbeat.json
[2025-06-05 18:02:05] -rw-r--r-- 1 boincer umatlas      5824 Jun  5 18:01 init_data.xml
[2025-06-05 18:02:05] -rw------- 1 boincer umatlas 179630084 Jun  5 18:01 HITS.45006595._003740.pool.root.1
[2025-06-05 18:02:05] -rw-r--r-- 1 boincer umatlas       529 Jun  5 18:01 boinc_task_state.xml
[2025-06-05 18:02:05] -rw-r--r-- 1 boincer umatlas        27 Jun  5 18:01 wrapper_checkpoint.txt
[2025-06-05 18:02:05] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 18:01 boinc_mmap_file
[2025-06-05 18:02:05] -rw------- 1 boincer umatlas      1048 Jun  5 18:01 memory_monitor_summary.json
[2025-06-05 18:02:05] -rw------- 1 boincer umatlas    317598 Jun  5 18:01 log.45006595._003740.job.log.tgz.1
[2025-06-05 18:02:05] -rw------- 1 boincer umatlas      7746 Jun  5 18:01 heartbeat.json
[2025-06-05 18:02:05] -rw------- 1 boincer umatlas      4548 Jun  5 18:02 pilotlog.txt
[2025-06-05 18:02:05] -rw------- 1 boincer umatlas    561788 Jun  5 18:02 log.45006595._003740.job.log.1
[2025-06-05 18:02:05] -rw------- 1 boincer umatlas       357 Jun  5 18:02 output.list
[2025-06-05 18:02:05] -rw-r--r-- 1 boincer umatlas       620 Jun  5 18:02 runtime_log
[2025-06-05 18:02:05] -rw------- 1 boincer umatlas    901120 Jun  5 18:02 result.tar.gz
[2025-06-05 18:02:05] -rw-r--r-- 1 boincer umatlas      8654 Jun  5 18:02 runtime_log.err
[2025-06-05 18:02:05] -rw------- 1 boincer umatlas       657 Jun  5 18:02 JxcKDmkENg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDPfKDmT2LRzn.diag
[2025-06-05 18:02:05] -rw-r--r-- 1 boincer umatlas     22395 Jun  5 18:02 stderr.txt
[2025-06-05 18:02:05] HITS file was successfully produced:
[2025-06-05 18:02:05] -rw------- 1 boincer umatlas 179630084 Jun  5 18:01 shared/HITS.pool.root.1
[2025-06-05 18:02:05]  *** Contents of shared directory: ***
[2025-06-05 18:02:05] total 386252
[2025-06-05 18:02:05] -rw-r--r-- 2 boincer umatlas 214451486 Jun  5 16:20 ATLAS.root_0
[2025-06-05 18:02:05] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 16:20 start_atlas.sh
[2025-06-05 18:02:05] -rw-r--r-- 2 boincer umatlas    508877 Jun  5 16:20 input.tar.gz
[2025-06-05 18:02:05] -rw------- 1 boincer umatlas 179630084 Jun  5 18:01 HITS.pool.root.1
[2025-06-05 18:02:05] -rw------- 1 boincer umatlas    901120 Jun  5 18:02 result.tar.gz
18:02:06 (3968): run_atlas exited; CPU time 45020.797339
18:02:06 (3968): called boinc_finish(0)

</stderr_txt>
]]>

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