Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:14:04 (210439): wrapper (7.7.26015): starting
16:14:04 (210439): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 16:14:04] Arguments: --nthreads 8
[2025-06-05 16:14:04] Threads: 8
[2025-06-05 16:14:04] Checking for CVMFS
[2025-06-05 16:14:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 16:14:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 16:14:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 16:14:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 16:14:06] 2.11.2.0 7041 30688 213888 146830 2 334 13714610 18432000 23437 130560 0 124793264 99.601 97044970 31233 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 16:14:06] CVMFS is ok
[2025-06-05 16:14:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 16:14:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 16:14:06] Further information can be found at the LHC@home message board.
[2025-06-05 16:14:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 16:14:06] Checking for apptainer binary...
[2025-06-05 16:14:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 16:14:06] Running /usr/bin/apptainer --version
[2025-06-05 16:14:06] apptainer version 1.3.2-1.el7
[2025-06-05 16:14:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 16:14:43] c-211-33-2.aglt2.org
[2025-06-05 16:14:43] apptainer works
[2025-06-05 16:14:43] Set ATHENA_PROC_NUMBER=8
[2025-06-05 16:14:43] Set ATHENA_CORE_NUMBER=8
[2025-06-05 16:14:43] Starting ATLAS job with PandaID=6678312721
[2025-06-05 16:14:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 20:45:47]  *** The last 200 lines of the pilot log: ***
[2025-06-05 20:45:47] 2025-06-06 00:45:32,367 | INFO     | mean y: 2411670.1739130435
[2025-06-05 20:45:47] 2025-06-06 00:45:32,367 | INFO     | -- intersect: -42206763416.3171
[2025-06-05 20:45:47] 2025-06-06 00:45:32,367 | INFO     | intersect: -42206763416.3171
[2025-06-05 20:45:47] 2025-06-06 00:45:32,367 | INFO     | chi2: 4.453387327692724
[2025-06-05 20:45:47] 2025-06-06 00:45:32,367 | INFO     | current chi2=4.453387327692724 (change=54.77795498126592 %)
[2025-06-05 20:45:47] 2025-06-06 00:45:32,368 | INFO     | sum of square deviations: 4729442373.899213
[2025-06-05 20:45:47] 2025-06-06 00:45:32,369 | INFO     | sum of deviations: 49146503393.02018
[2025-06-05 20:45:47] 2025-06-06 00:45:32,369 | INFO     | mean x: 1749163112.7701614
[2025-06-05 20:45:47] 2025-06-06 00:45:32,369 | INFO     | mean y: 2449267.245967742
[2025-06-05 20:45:47] 2025-06-06 00:45:32,370 | INFO     | -- intersect: -18174165238.33051
[2025-06-05 20:45:47] 2025-06-06 00:45:32,370 | INFO     | intersect: -18174165238.33051
[2025-06-05 20:45:47] 2025-06-06 00:45:32,370 | INFO     | chi2: 1.233919973443888
[2025-06-05 20:45:47] 2025-06-06 00:45:32,370 | INFO     | current chi2=1.233919973443888 (change=72.29255210363264 %)
[2025-06-05 20:45:47] 2025-06-06 00:45:32,370 | INFO     | sum of square deviations: 4449097170.074047
[2025-06-05 20:45:47] 2025-06-06 00:45:32,372 | INFO     | sum of deviations: 10714568425.530867
[2025-06-05 20:45:47] 2025-06-06 00:45:32,372 | INFO     | mean x: 1749163265.271605
[2025-06-05 20:45:47] 2025-06-06 00:45:32,372 | INFO     | mean y: 2470089.6131687243
[2025-06-05 20:45:47] 2025-06-06 00:45:32,372 | INFO     | -- intersect: -4209964203.626979
[2025-06-05 20:45:47] 2025-06-06 00:45:32,372 | INFO     | intersect: -4209964203.626979
[2025-06-05 20:45:47] 2025-06-06 00:45:32,373 | INFO     | chi2: 0.24744633327964066
[2025-06-05 20:45:47] 2025-06-06 00:45:32,373 | INFO     | current chi2=0.24744633327964066 (change=79.94632240298255 %)
[2025-06-05 20:45:47] 2025-06-06 00:45:32,373 | INFO     | sum of square deviations: 4180054503.747879
[2025-06-05 20:45:47] 2025-06-06 00:45:32,375 | INFO     | sum of deviations: -4889632784.226882
[2025-06-05 20:45:47] 2025-06-06 00:45:32,375 | INFO     | mean x: 1749163417.7731092
[2025-06-05 20:45:47] 2025-06-06 00:45:32,375 | INFO     | mean y: 2478919.995798319
[2025-06-05 20:45:47] 2025-06-06 00:45:32,375 | INFO     | -- intersect: 2048568698.2140584
[2025-06-05 20:45:47] 2025-06-06 00:45:32,375 | INFO     | intersect: 2048568698.2140584
[2025-06-05 20:45:47] 2025-06-06 00:45:32,375 | INFO     | chi2: 0.09481469691465001
[2025-06-05 20:45:47] 2025-06-06 00:45:32,376 | INFO     | current chi2=0.09481469691465001 (change=61.68272301392347 %)
[2025-06-05 20:45:47] 2025-06-06 00:45:32,376 | INFO     | sum of square deviations: 3922067050.8669558
[2025-06-05 20:45:47] 2025-06-06 00:45:32,377 | INFO     | sum of deviations: -13116959303.609447
[2025-06-05 20:45:47] 2025-06-06 00:45:32,377 | INFO     | mean x: 1749163570.27897
[2025-06-05 20:45:47] 2025-06-06 00:45:32,378 | INFO     | mean y: 2483783.793991416
[2025-06-05 20:45:47] 2025-06-06 00:45:32,378 | INFO     | -- intersect: 5852385651.645497
[2025-06-05 20:45:47] 2025-06-06 00:45:32,378 | INFO     | intersect: 5852385651.645497
[2025-06-05 20:45:47] 2025-06-06 00:45:32,378 | INFO     | chi2: 0.04571361311478662
[2025-06-05 20:45:47] 2025-06-06 00:45:32,378 | INFO     | current chi2=0.04571361311478662 (change=51.78636371538797 %)
[2025-06-05 20:45:47] 2025-06-06 00:45:32,378 | INFO     | sum of square deviations: 3674959280.140358
[2025-06-05 20:45:47] 2025-06-06 00:45:32,380 | INFO     | sum of deviations: -11265086756.824568
[2025-06-05 20:45:47] 2025-06-06 00:45:32,380 | INFO     | mean x: 1749163722.7719297
[2025-06-05 20:45:47] 2025-06-06 00:45:32,380 | INFO     | mean y: 2482637.464912281
[2025-06-05 20:45:47] 2025-06-06 00:45:32,380 | INFO     | -- intersect: 5364305609.32746
[2025-06-05 20:45:47] 2025-06-06 00:45:32,380 | INFO     | intersect: 5364305609.32746
[2025-06-05 20:45:47] 2025-06-06 00:45:32,381 | INFO     | chi2: 0.04490524668180766
[2025-06-05 20:45:47] 2025-06-06 00:45:32,381 | INFO     | current chi2=0.04490524668180766 (change=1.7683275897469592 %)
[2025-06-05 20:45:47] 2025-06-06 00:45:32,381 | INFO     | left removable region: 60
[2025-06-05 20:45:47] 2025-06-06 00:45:32,381 | INFO     | sum of square deviations: 2194580336.0
[2025-06-05 20:45:47] 2025-06-06 00:45:32,382 | INFO     | sum of deviations: 4710358335.000001
[2025-06-05 20:45:47] 2025-06-06 00:45:32,382 | INFO     | mean x: 1749164454.75
[2025-06-05 20:45:47] 2025-06-06 00:45:32,382 | INFO     | mean y: 2470739.7916666665
[2025-06-05 20:45:47] 2025-06-06 00:45:32,382 | INFO     | -- intersect: -3751864990.6262674
[2025-06-05 20:45:47] 2025-06-06 00:45:32,382 | INFO     | intersect: -3751864990.6262674
[2025-06-05 20:45:47] 2025-06-06 00:45:32,383 | INFO     | chi2: 5.661664084909285e-05
[2025-06-05 20:45:47] 2025-06-06 00:45:32,383 | INFO     | -- intersect: -3751864990.6262674
[2025-06-05 20:45:47] 2025-06-06 00:45:32,383 | INFO     | current memory leak: 2.15 B/s (using 192 data points, chi2=0.00)
[2025-06-05 20:45:47] 2025-06-06 00:45:32,384 | INFO     | ..............................
[2025-06-05 20:45:47] 2025-06-06 00:45:32,384 | INFO     | . Timing measurements:
[2025-06-05 20:45:47] 2025-06-06 00:45:32,384 | INFO     | . get job = 0 s
[2025-06-05 20:45:47] 2025-06-06 00:45:32,384 | INFO     | . initial setup = 11 s
[2025-06-05 20:45:47] 2025-06-06 00:45:32,384 | INFO     | . payload setup = 132 s
[2025-06-05 20:45:47] 2025-06-06 00:45:32,384 | INFO     | . stage-in = 0 s
[2025-06-05 20:45:47] 2025-06-06 00:45:32,384 | INFO     | . payload execution = 15820 s
[2025-06-05 20:45:47] 2025-06-06 00:45:32,384 | INFO     | . stage-out = 3 s
[2025-06-05 20:45:47] 2025-06-06 00:45:32,384 | INFO     | . log creation = 0 s
[2025-06-05 20:45:47] 2025-06-06 00:45:32,384 | INFO     | ..............................
[2025-06-05 20:45:47] 2025-06-06 00:45:32,479 | INFO     | 
[2025-06-05 20:45:47] 2025-06-06 00:45:32,479 | INFO     | job summary report
[2025-06-05 20:45:47] 2025-06-06 00:45:32,479 | INFO     | --------------------------------------------------
[2025-06-05 20:45:47] 2025-06-06 00:45:32,479 | INFO     | PanDA job id: 6678312721
[2025-06-05 20:45:47] 2025-06-06 00:45:32,479 | INFO     | task id: 45006595
[2025-06-05 20:45:47] 2025-06-06 00:45:32,480 | INFO     | errors: (none)
[2025-06-05 20:45:47] 2025-06-06 00:45:32,480 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 20:45:47] 2025-06-06 00:45:32,480 | INFO     | pilot state: finished 
[2025-06-05 20:45:47] 2025-06-06 00:45:32,480 | INFO     | transexitcode: 0
[2025-06-05 20:45:47] 2025-06-06 00:45:32,480 | INFO     | exeerrorcode: 0
[2025-06-05 20:45:47] 2025-06-06 00:45:32,480 | INFO     | exeerrordiag: 
[2025-06-05 20:45:47] 2025-06-06 00:45:32,480 | INFO     | exitcode: 0
[2025-06-05 20:45:47] 2025-06-06 00:45:32,480 | INFO     | exitmsg: OK
[2025-06-05 20:45:47] 2025-06-06 00:45:32,480 | INFO     | cpuconsumptiontime: 40283 s
[2025-06-05 20:45:47] 2025-06-06 00:45:32,480 | INFO     | nevents: 400
[2025-06-05 20:45:47] 2025-06-06 00:45:32,480 | INFO     | neventsw: 0
[2025-06-05 20:45:47] 2025-06-06 00:45:32,480 | INFO     | pid: 234326
[2025-06-05 20:45:47] 2025-06-06 00:45:32,480 | INFO     | pgrp: 234326
[2025-06-05 20:45:47] 2025-06-06 00:45:32,480 | INFO     | corecount: 8
[2025-06-05 20:45:47] 2025-06-06 00:45:32,480 | INFO     | event service: False
[2025-06-05 20:45:47] 2025-06-06 00:45:32,481 | INFO     | sizes: {0: 2396514, 1: 2397199, 2: 2397227, 3: 2397426, 14: 2397426, 25: 2397454, 35: 2397610, 46: 2397638, 58: 2397900, 69: 2397900, 15955: 2429132, 15959: 243812
[2025-06-05 20:45:47] 2025-06-06 00:45:32,481 | INFO     | --------------------------------------------------
[2025-06-05 20:45:47] 2025-06-06 00:45:32,481 | INFO     | 
[2025-06-05 20:45:47] 2025-06-06 00:45:32,481 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-06-05 20:45:47] 2025-06-06 00:45:32,711 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 20:45:47] 2025-06-06 00:45:32,712 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 20:45:47] 2025-06-06 00:45:32,712 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 20:45:47] 2025-06-06 00:45:32,712 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 20:45:47] 2025-06-06 00:45:32,712 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 20:45:47] 2025-06-06 00:45:32,712 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 20:45:47] 2025-06-06 00:45:32,712 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 20:45:47] 2025-06-06 00:45:32,712 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 20:45:47] 2025-06-06 00:45:32,712 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 20:45:47] 2025-06-06 00:45:32,712 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 20:45:47] 2025-06-06 00:45:32,713 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 20:45:47] 2025-06-06 00:45:32,713 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 20:45:47] 2025-06-06 00:45:32,713 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 20:45:47] 2025-06-06 00:45:32,713 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 20:45:47] 2025-06-06 00:45:32,713 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 20:45:47] 2025-06-06 00:45:32,713 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 20:45:47] 2025-06-06 00:45:32,713 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 20:45:47] 2025-06-06 00:45:32,713 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 20:45:47] 2025-06-06 00:45:32,713 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 20:45:47] 2025-06-06 00:45:32,713 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 20:45:47] 2025-06-06 00:45:32,713 | INFO     | job 6678312721 has completed (purged errors)
[2025-06-05 20:45:47] 2025-06-06 00:45:32,714 | INFO     | overall cleanup function is called
[2025-06-05 20:45:47] 2025-06-06 00:45:33,723 | INFO     | --- collectZombieJob: --- 10, [234326]
[2025-06-05 20:45:47] 2025-06-06 00:45:33,724 | INFO     | zombie collector waiting for pid 234326
[2025-06-05 20:45:47] 2025-06-06 00:45:33,724 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 20:45:47] 2025-06-06 00:45:33,724 | INFO     | collected zombie processes
[2025-06-05 20:45:47] 2025-06-06 00:45:33,724 | INFO     | will attempt to kill all subprocesses of pid=234326
[2025-06-05 20:45:47] 2025-06-06 00:45:34,288 | INFO     | process IDs to be killed: [234326] (in reverse order)
[2025-06-05 20:45:47] 2025-06-06 00:45:34,395 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 20:45:47] 2025-06-06 00:45:34,396 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 20:45:47] 2025-06-06 00:45:34,405 | INFO     | did not find any defunct processes belonging to 234326
[2025-06-05 20:45:47] 2025-06-06 00:45:34,414 | INFO     | did not find any defunct processes belonging to 234326
[2025-06-05 20:45:47] 2025-06-06 00:45:34,415 | INFO     | ready for new job
[2025-06-05 20:45:47] 2025-06-06 00:45:34,415 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 20:45:47] 2025-06-06 00:45:34,417 | INFO     | **************************************
[2025-06-05 20:45:47] 2025-06-06 00:45:34,417 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 20:45:47] 2025-06-06 00:45:34,417 | INFO     | **************************************
[2025-06-05 20:45:47] 2025-06-06 00:45:34,417 | INFO     | 
[2025-06-05 20:45:47] 2025-06-06 00:45:34,422 | INFO     | architecture information:
[2025-06-05 20:45:47] 2025-06-06 00:45:34,427 | INFO     | executing command: cat /etc/os-release
[2025-06-05 20:45:47] 2025-06-06 00:45:34,501 | INFO     | cat /etc/os-release:
[2025-06-05 20:45:47] NAME="CentOS Linux"
[2025-06-05 20:45:47] VERSION="7 (Core)"
[2025-06-05 20:45:47] ID="centos"
[2025-06-05 20:45:47] ID_LIKE="rhel fedora"
[2025-06-05 20:45:47] VERSION_ID="7"
[2025-06-05 20:45:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 20:45:47] ANSI_COLOR="0;31"
[2025-06-05 20:45:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 20:45:47] HOME_URL="https://www.centos.org/"
[2025-06-05 20:45:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 20:45:47] 
[2025-06-05 20:45:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 20:45:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 20:45:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 20:45:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 20:45:47] 
[2025-06-05 20:45:47] 2025-06-06 00:45:34,501 | INFO     | **************************************
[2025-06-05 20:45:47] 2025-06-06 00:45:35,005 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-06-05 20:45:47] 2025-06-06 00:45:35,028 | INFO     | sufficient remaining disk space (105994256384 B)
[2025-06-05 20:45:47] 2025-06-06 00:45:35,028 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 20:45:47] 2025-06-06 00:45:35,028 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 20:45:47] 2025-06-06 00:45:35,028 | INFO     | update_server=False
[2025-06-05 20:45:47] 2025-06-06 00:45:35,029 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 20:45:47] 2025-06-06 00:45:35,029 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 20:45:47] 2025-06-06 00:45:35,029 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 20:45:47] 2025-06-06 00:45:35,029 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 20:45:47] 2025-06-06 00:45:35,029 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 20:45:47] 2025-06-06 00:45:35,029 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 20:45:47] 2025-06-06 00:45:35,138 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 20:45:47] 2025-06-06 00:45:35,139 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 20:45:47] 2025-06-06 00:45:35,139 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 20:45:47] 2025-06-06 00:45:35,139 | INFO     | will abort loop
[2025-06-05 20:45:47] 2025-06-06 00:45:35,189 | INFO     | all data control threads have been joined
[2025-06-05 20:45:47] 2025-06-06 00:45:35,973 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 20:45:47] 2025-06-06 00:45:36,035 | INFO     | [job] retrieve thread has finished
[2025-06-05 20:45:47] 2025-06-06 00:45:36,145 | INFO     | [job] job monitor thread has finished
[2025-06-05 20:45:47] 2025-06-06 00:45:36,195 | INFO     | [data] control thread has finished
[2025-06-05 20:45:47] 2025-06-06 00:45:36,220 | INFO     | all job control threads have been joined
[2025-06-05 20:45:47] 2025-06-06 00:45:36,475 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 20:45:47] 2025-06-06 00:45:36,529 | INFO     | all payload control threads have been joined
[2025-06-05 20:45:47] 2025-06-06 00:45:36,583 | INFO     | [job] validate thread has finished
[2025-06-05 20:45:47] 2025-06-06 00:45:36,620 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 20:45:47] 2025-06-06 00:45:36,624 | INFO     | [data] copytool_in thread has finished
[2025-06-05 20:45:47] 2025-06-06 00:45:36,740 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 20:45:47] 2025-06-06 00:45:36,849 | INFO     | [payload] failed_post thread has finished
[2025-06-05 20:45:47] 2025-06-06 00:45:37,018 | INFO     | [payload] validate_post thread has finished
[2025-06-05 20:45:47] 2025-06-06 00:45:37,103 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 20:45:47] 2025-06-06 00:45:37,227 | INFO     | [job] control thread has finished
[2025-06-05 20:45:47] 2025-06-06 00:45:37,493 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 20:45:47] 2025-06-06 00:45:37,537 | INFO     | [payload] control thread has finished
[2025-06-05 20:45:47] 2025-06-06 00:45:37,980 | INFO     | [data] copytool_out thread has finished
[2025-06-05 20:45:47] 2025-06-06 00:45:38,500 | INFO     | [job] queue monitor thread has finished
[2025-06-05 20:45:47] 2025-06-06 00:45:39,037 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 20:45:47] 2025-06-06 00:45:40,367 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140526919354176)>', '<ExcThread(monitor, started 140526481299200)>']
[2025-06-05 20:45:47] 2025-06-06 00:45:41,067 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 20:45:47] 2025-06-06 00:45:41,068 | INFO     | [monitor] control thread has ended
[2025-06-05 20:45:47] 2025-06-06 00:45:45,392 | INFO     | all workflow threads have been joined
[2025-06-05 20:45:47] 2025-06-06 00:45:45,393 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 20:45:47] 2025-06-06 00:45:45,393 | INFO     | traces error code: 0
[2025-06-05 20:45:47] 2025-06-06 00:45:45,393 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 20:45:47] 2025-06-06 00:45:45,916 [wrapper] ==== pilot stdout END ====
[2025-06-05 20:45:47] 2025-06-06 00:45:45,922 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 20:45:47] 2025-06-06 00:45:45,942 [wrapper] pilotpid: 218641
[2025-06-05 20:45:47] 2025-06-06 00:45:45,980 [wrapper] Pilot exit status: 0
[2025-06-05 20:45:47] 2025-06-06 00:45:46,179 [wrapper] pandaids: 6678312721
[2025-06-05 20:45:47] 2025-06-06 00:45:46,594 [wrapper] cleanup supervisor_pilot  27865 218642
[2025-06-05 20:45:47] 2025-06-06 00:45:46,601 [wrapper] Test setup, not cleaning
[2025-06-05 20:45:47] 2025-06-06 00:45:46,606 [wrapper] apfmon messages muted
[2025-06-05 20:45:47] 2025-06-06 00:45:46,613 [wrapper] ==== wrapper stdout END ====
[2025-06-05 20:45:47] 2025-06-06 00:45:46,619 [wrapper] ==== wrapper stderr END ====
[2025-06-05 20:45:47]  *** Error codes and diagnostics ***
[2025-06-05 20:45:47]     "exeErrorCode": 0,
[2025-06-05 20:45:47]     "exeErrorDiag": "",
[2025-06-05 20:45:47]     "pilotErrorCode": 0,
[2025-06-05 20:45:47]     "pilotErrorDiag": "",
[2025-06-05 20:45:47]  *** Listing of results directory ***
[2025-06-05 20:45:47] total 394720
[2025-06-05 20:45:47] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 00:04 pilot3.tar.gz
[2025-06-05 20:45:47] -rwx------ 1 boincer umatlas     37140 Jun  4 00:16 runpilot2-wrapper.sh
[2025-06-05 20:45:47] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 00:16 queuedata.json
[2025-06-05 20:45:47] -rw-r--r-- 1 boincer umatlas       100 Jun  5 16:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 20:45:47] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 16:14 run_atlas
[2025-06-05 20:45:47] -rw-r--r-- 1 boincer umatlas       105 Jun  5 16:14 job.xml
[2025-06-05 20:45:47] -rw-r--r-- 2 boincer umatlas 215191603 Jun  5 16:14 EVNT.45006593._002089.pool.root.1
[2025-06-05 20:45:47] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 16:14 start_atlas.sh
[2025-06-05 20:45:47] drwxrwx--x 2 boincer umatlas      4096 Jun  5 16:14 shared
[2025-06-05 20:45:47] -rw-r--r-- 2 boincer umatlas    508881 Jun  5 16:14 input.tar.gz
[2025-06-05 20:45:47] -rw-r--r-- 1 boincer umatlas         0 Jun  5 16:14 boinc_lockfile
[2025-06-05 20:45:47] -rw-r--r-- 1 boincer umatlas      2525 Jun  5 16:14 pandaJob.out
[2025-06-05 20:45:47] -rw------- 1 boincer umatlas    987599 Jun  5 16:17 agis_schedconf.cvmfs.json
[2025-06-05 20:45:47] drwx------ 4 boincer umatlas      4096 Jun  5 16:17 pilot3
[2025-06-05 20:45:47] -rw-r--r-- 1 boincer umatlas      6299 Jun  5 20:38 init_data.xml
[2025-06-05 20:45:47] -rw------- 1 boincer umatlas 181663434 Jun  5 20:44 HITS.45006595._052167.pool.root.1
[2025-06-05 20:45:47] -rw-r--r-- 1 boincer umatlas       531 Jun  5 20:44 boinc_task_state.xml
[2025-06-05 20:45:47] -rw------- 1 boincer umatlas      1064 Jun  5 20:45 memory_monitor_summary.json
[2025-06-05 20:45:47] -rw------- 1 boincer umatlas   1598969 Jun  5 20:45 agis_ddmendpoints.agis.ALL.json
[2025-06-05 20:45:47] -rw------- 1 boincer umatlas    410367 Jun  5 20:45 log.45006595._052167.job.log.tgz.1
[2025-06-05 20:45:47] -rw------- 1 boincer umatlas        95 Jun  5 20:45 pilot_heartbeat.json
[2025-06-05 20:45:47] -rw------- 1 boincer umatlas      7765 Jun  5 20:45 heartbeat.json
[2025-06-05 20:45:47] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 20:45 boinc_mmap_file
[2025-06-05 20:45:47] -rw-r--r-- 1 boincer umatlas        28 Jun  5 20:45 wrapper_checkpoint.txt
[2025-06-05 20:45:47] -rw------- 1 boincer umatlas      4663 Jun  5 20:45 pilotlog.txt
[2025-06-05 20:45:47] -rw------- 1 boincer umatlas   1336846 Jun  5 20:45 log.45006595._052167.job.log.1
[2025-06-05 20:45:47] -rw------- 1 boincer umatlas       357 Jun  5 20:45 output.list
[2025-06-05 20:45:47] -rw-r--r-- 1 boincer umatlas       620 Jun  5 20:45 runtime_log
[2025-06-05 20:45:47] -rw------- 1 boincer umatlas   1771520 Jun  5 20:45 result.tar.gz
[2025-06-05 20:45:47] -rw------- 1 boincer umatlas       663 Jun  5 20:45 w6TNDm2iug7n9Rq4apOajLDm4fhM0noT9bVof3QYDmfgaKDmUeJROm.diag
[2025-06-05 20:45:47] -rw-r--r-- 1 boincer umatlas      8670 Jun  5 20:45 runtime_log.err
[2025-06-05 20:45:47] -rw-r--r-- 1 boincer umatlas     20953 Jun  5 20:45 stderr.txt
[2025-06-05 20:45:47] HITS file was successfully produced:
[2025-06-05 20:45:47] -rw------- 1 boincer umatlas 181663434 Jun  5 20:44 shared/HITS.pool.root.1
[2025-06-05 20:45:47]  *** Contents of shared directory: ***
[2025-06-05 20:45:47] total 389812
[2025-06-05 20:45:47] -rw-r--r-- 2 boincer umatlas 215191603 Jun  5 16:14 ATLAS.root_0
[2025-06-05 20:45:47] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 16:14 start_atlas.sh
[2025-06-05 20:45:47] -rw-r--r-- 2 boincer umatlas    508881 Jun  5 16:14 input.tar.gz
[2025-06-05 20:45:47] -rw------- 1 boincer umatlas 181663434 Jun  5 20:44 HITS.pool.root.1
[2025-06-05 20:45:47] -rw------- 1 boincer umatlas   1771520 Jun  5 20:45 result.tar.gz
20:45:48 (210439): run_atlas exited; CPU time 40813.076201
20:45:48 (210439): called boinc_finish(0)

</stderr_txt>
]]>

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