Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:14:02 (210318): wrapper (7.7.26015): starting
16:14:02 (210318): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 16:14:02] Arguments: --nthreads 8
[2025-06-05 16:14:02] Threads: 8
[2025-06-05 16:14:02] Checking for CVMFS
[2025-06-05 16:14:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 16:14:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 16:14:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 16:14:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 16:14:05] 2.11.2.0 7041 30688 213880 146830 2 334 13714610 18432000 23437 130560 0 124793264 99.601 97044970 31233 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 16:14:05] CVMFS is ok
[2025-06-05 16:14:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 16:14:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 16:14:05] Further information can be found at the LHC@home message board.
[2025-06-05 16:14:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 16:14:05] Checking for apptainer binary...
[2025-06-05 16:14:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 16:14:05] Running /usr/bin/apptainer --version
[2025-06-05 16:14:06] apptainer version 1.3.2-1.el7
[2025-06-05 16:14:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 16:14:43] c-211-33-2.aglt2.org
[2025-06-05 16:14:43] apptainer works
[2025-06-05 16:14:43] Set ATHENA_PROC_NUMBER=8
[2025-06-05 16:14:43] Set ATHENA_CORE_NUMBER=8
[2025-06-05 16:14:43] Starting ATLAS job with PandaID=6668992116
[2025-06-05 16:14:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 21:33:12]  *** The last 200 lines of the pilot log: ***
[2025-06-05 21:33:12] 2025-06-06 01:32:56,730 | INFO     | mean y: 2386081.9967213115
[2025-06-05 21:33:12] 2025-06-06 01:32:56,730 | INFO     | -- intersect: -53514065724.2688
[2025-06-05 21:33:12] 2025-06-06 01:32:56,730 | INFO     | intersect: -53514065724.2688
[2025-06-05 21:33:12] 2025-06-06 01:32:56,731 | INFO     | chi2: 10.430033504426746
[2025-06-05 21:33:12] 2025-06-06 01:32:56,731 | INFO     | sum of square deviations: 8371966938.546687
[2025-06-05 21:33:12] 2025-06-06 01:32:56,734 | INFO     | sum of deviations: 285059346438.77325
[2025-06-05 21:33:12] 2025-06-06 01:32:56,734 | INFO     | mean x: 1749164089.6466668
[2025-06-05 21:33:12] 2025-06-06 01:32:56,734 | INFO     | mean y: 2391675.0733333332
[2025-06-05 21:33:12] 2025-06-06 01:32:56,734 | INFO     | -- intersect: -59555365285.6113
[2025-06-05 21:33:12] 2025-06-06 01:32:56,734 | INFO     | intersect: -59555365285.6113
[2025-06-05 21:33:12] 2025-06-06 01:32:56,735 | INFO     | chi2: 9.639565416234399
[2025-06-05 21:33:12] 2025-06-06 01:32:56,735 | INFO     | current chi2=9.639565416234399 (change=7.578768446494958 %)
[2025-06-05 21:33:12] 2025-06-06 01:32:56,735 | INFO     | right removable region: 299
[2025-06-05 21:33:12] 2025-06-06 01:32:56,736 | INFO     | sum of square deviations: 8371940098.546687
[2025-06-05 21:33:12] 2025-06-06 01:32:56,738 | INFO     | sum of deviations: 162603860905.10672
[2025-06-05 21:33:12] 2025-06-06 01:32:56,738 | INFO     | mean x: 1749164394.6466668
[2025-06-05 21:33:12] 2025-06-06 01:32:56,738 | INFO     | mean y: 2424250.4066666667
[2025-06-05 21:33:12] 2025-06-06 01:32:56,739 | INFO     | -- intersect: -33970690771.84073
[2025-06-05 21:33:12] 2025-06-06 01:32:56,739 | INFO     | intersect: -33970690771.84073
[2025-06-05 21:33:12] 2025-06-06 01:32:56,739 | INFO     | chi2: 5.216896728881317
[2025-06-05 21:33:12] 2025-06-06 01:32:56,739 | INFO     | current chi2=5.216896728881317 (change=49.98197535351016 %)
[2025-06-05 21:33:12] 2025-06-06 01:32:56,740 | INFO     | sum of square deviations: 7960253843.437277
[2025-06-05 21:33:12] 2025-06-06 01:32:56,742 | INFO     | sum of deviations: 77090437257.54236
[2025-06-05 21:33:12] 2025-06-06 01:32:56,743 | INFO     | mean x: 1749164547.1491525
[2025-06-05 21:33:12] 2025-06-06 01:32:56,743 | INFO     | mean y: 2455901.1694915253
[2025-06-05 21:33:12] 2025-06-06 01:32:56,743 | INFO     | -- intersect: -16937187284.49216
[2025-06-05 21:33:12] 2025-06-06 01:32:56,743 | INFO     | intersect: -16937187284.49216
[2025-06-05 21:33:12] 2025-06-06 01:32:56,743 | INFO     | chi2: 2.114765997647399
[2025-06-05 21:33:12] 2025-06-06 01:32:56,744 | INFO     | current chi2=2.114765997647399 (change=59.463142409167865 %)
[2025-06-05 21:33:12] 2025-06-06 01:32:56,744 | INFO     | sum of square deviations: 7562288775.824112
[2025-06-05 21:33:12] 2025-06-06 01:32:56,747 | INFO     | sum of deviations: 30572637639.10002
[2025-06-05 21:33:12] 2025-06-06 01:32:56,747 | INFO     | mean x: 1749164699.651724
[2025-06-05 21:33:12] 2025-06-06 01:32:56,747 | INFO     | mean y: 2473668.1
[2025-06-05 21:33:12] 2025-06-06 01:32:56,747 | INFO     | -- intersect: -7069006953.549455
[2025-06-05 21:33:12] 2025-06-06 01:32:56,747 | INFO     | intersect: -7069006953.549455
[2025-06-05 21:33:12] 2025-06-06 01:32:56,748 | INFO     | chi2: 1.1508393657437346
[2025-06-05 21:33:12] 2025-06-06 01:32:56,748 | INFO     | current chi2=1.1508393657437346 (change=45.580770306312765 %)
[2025-06-05 21:33:12] 2025-06-06 01:32:56,748 | INFO     | sum of square deviations: 7177812333.207047
[2025-06-05 21:33:12] 2025-06-06 01:32:56,751 | INFO     | sum of deviations: 10818650932.263157
[2025-06-05 21:33:12] 2025-06-06 01:32:56,751 | INFO     | mean x: 1749164852.154386
[2025-06-05 21:33:12] 2025-06-06 01:32:56,751 | INFO     | mean y: 2481488.789473684
[2025-06-05 21:33:12] 2025-06-06 01:32:56,751 | INFO     | -- intersect: -2633921231.1444044
[2025-06-05 21:33:12] 2025-06-06 01:32:56,751 | INFO     | intersect: -2633921231.1444044
[2025-06-05 21:33:12] 2025-06-06 01:32:56,752 | INFO     | chi2: 0.99957814057911
[2025-06-05 21:33:12] 2025-06-06 01:32:56,752 | INFO     | current chi2=0.99957814057911 (change=13.143556752324978 %)
[2025-06-05 21:33:12] 2025-06-06 01:32:56,752 | INFO     | left removable region: 40
[2025-06-05 21:33:12] 2025-06-06 01:32:56,752 | INFO     | sum of square deviations: 5387074735.822414
[2025-06-05 21:33:12] 2025-06-06 01:32:56,754 | INFO     | sum of deviations: 6110399078.988416
[2025-06-05 21:33:12] 2025-06-06 01:32:56,754 | INFO     | mean x: 1749165279.1544402
[2025-06-05 21:33:12] 2025-06-06 01:32:56,755 | INFO     | mean y: 2499367.5752895754
[2025-06-05 21:33:12] 2025-06-06 01:32:56,755 | INFO     | -- intersect: -1981526924.035479
[2025-06-05 21:33:12] 2025-06-06 01:32:56,755 | INFO     | intersect: -1981526924.035479
[2025-06-05 21:33:12] 2025-06-06 01:32:56,755 | INFO     | chi2: 0.02381903650452128
[2025-06-05 21:33:12] 2025-06-06 01:32:56,755 | INFO     | -- intersect: -1981526924.035479
[2025-06-05 21:33:12] 2025-06-06 01:32:56,756 | INFO     | current memory leak: 1.13 B/s (using 259 data points, chi2=0.02)
[2025-06-05 21:33:12] 2025-06-06 01:32:56,756 | INFO     | ..............................
[2025-06-05 21:33:12] 2025-06-06 01:32:56,756 | INFO     | . Timing measurements:
[2025-06-05 21:33:12] 2025-06-06 01:32:56,757 | INFO     | . get job = 0 s
[2025-06-05 21:33:12] 2025-06-06 01:32:56,757 | INFO     | . initial setup = 10 s
[2025-06-05 21:33:12] 2025-06-06 01:32:56,757 | INFO     | . payload setup = 147 s
[2025-06-05 21:33:12] 2025-06-06 01:32:56,757 | INFO     | . stage-in = 0 s
[2025-06-05 21:33:12] 2025-06-06 01:32:56,757 | INFO     | . payload execution = 18665 s
[2025-06-05 21:33:12] 2025-06-06 01:32:56,757 | INFO     | . stage-out = 2 s
[2025-06-05 21:33:12] 2025-06-06 01:32:56,757 | INFO     | . log creation = 0 s
[2025-06-05 21:33:12] 2025-06-06 01:32:56,757 | INFO     | ..............................
[2025-06-05 21:33:12] 2025-06-06 01:32:57,281 | INFO     | 
[2025-06-05 21:33:12] 2025-06-06 01:32:57,281 | INFO     | job summary report
[2025-06-05 21:33:12] 2025-06-06 01:32:57,281 | INFO     | --------------------------------------------------
[2025-06-05 21:33:12] 2025-06-06 01:32:57,281 | INFO     | PanDA job id: 6668992116
[2025-06-05 21:33:12] 2025-06-06 01:32:57,281 | INFO     | task id: 44871837
[2025-06-05 21:33:12] 2025-06-06 01:32:57,281 | INFO     | errors: (none)
[2025-06-05 21:33:12] 2025-06-06 01:32:57,281 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 21:33:12] 2025-06-06 01:32:57,281 | INFO     | pilot state: finished 
[2025-06-05 21:33:12] 2025-06-06 01:32:57,281 | INFO     | transexitcode: 0
[2025-06-05 21:33:12] 2025-06-06 01:32:57,281 | INFO     | exeerrorcode: 0
[2025-06-05 21:33:12] 2025-06-06 01:32:57,281 | INFO     | exeerrordiag: 
[2025-06-05 21:33:12] 2025-06-06 01:32:57,281 | INFO     | exitcode: 0
[2025-06-05 21:33:12] 2025-06-06 01:32:57,282 | INFO     | exitmsg: OK
[2025-06-05 21:33:12] 2025-06-06 01:32:57,282 | INFO     | cpuconsumptiontime: 57519 s
[2025-06-05 21:33:12] 2025-06-06 01:32:57,282 | INFO     | nevents: 400
[2025-06-05 21:33:12] 2025-06-06 01:32:57,282 | INFO     | neventsw: 0
[2025-06-05 21:33:12] 2025-06-06 01:32:57,282 | INFO     | pid: 234466
[2025-06-05 21:33:12] 2025-06-06 01:32:57,282 | INFO     | pgrp: 234466
[2025-06-05 21:33:12] 2025-06-06 01:32:57,282 | INFO     | corecount: 8
[2025-06-05 21:33:12] 2025-06-06 01:32:57,282 | INFO     | event service: False
[2025-06-05 21:33:12] 2025-06-06 01:32:57,282 | INFO     | sizes: {0: 2397165, 1: 2397221, 2: 2397249, 3: 2397476, 4: 2397476, 15: 2397504, 26: 2397660, 37: 2397688, 47: 2397716, 58: 2397978, 59: 2398006, 18817: 2430566, 1
[2025-06-05 21:33:12] 2025-06-06 01:32:57,282 | INFO     | --------------------------------------------------
[2025-06-05 21:33:12] 2025-06-06 01:32:57,282 | INFO     | 
[2025-06-05 21:33:12] 2025-06-06 01:32:57,282 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-05 21:33:12] 2025-06-06 01:32:57,387 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 21:33:12] 2025-06-06 01:32:57,388 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 21:33:12] 2025-06-06 01:32:57,388 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 21:33:12] 2025-06-06 01:32:57,388 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 21:33:12] 2025-06-06 01:32:57,388 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 21:33:12] 2025-06-06 01:32:57,388 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 21:33:12] 2025-06-06 01:32:57,388 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 21:33:12] 2025-06-06 01:32:57,388 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 21:33:12] 2025-06-06 01:32:57,388 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 21:33:12] 2025-06-06 01:32:57,388 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 21:33:12] 2025-06-06 01:32:57,389 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 21:33:12] 2025-06-06 01:32:57,389 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 21:33:12] 2025-06-06 01:32:57,389 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 21:33:12] 2025-06-06 01:32:57,389 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 21:33:12] 2025-06-06 01:32:57,389 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 21:33:12] 2025-06-06 01:32:57,389 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 21:33:12] 2025-06-06 01:32:57,389 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 21:33:12] 2025-06-06 01:32:57,389 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 21:33:12] 2025-06-06 01:32:57,389 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 21:33:12] 2025-06-06 01:32:57,389 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 21:33:12] 2025-06-06 01:32:57,389 | INFO     | job 6668992116 has completed (purged errors)
[2025-06-05 21:33:12] 2025-06-06 01:32:57,389 | INFO     | overall cleanup function is called
[2025-06-05 21:33:12] 2025-06-06 01:32:58,397 | INFO     | --- collectZombieJob: --- 10, [234466]
[2025-06-05 21:33:12] 2025-06-06 01:32:58,398 | INFO     | zombie collector waiting for pid 234466
[2025-06-05 21:33:12] 2025-06-06 01:32:58,398 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 21:33:12] 2025-06-06 01:32:58,398 | INFO     | collected zombie processes
[2025-06-05 21:33:12] 2025-06-06 01:32:58,398 | INFO     | will attempt to kill all subprocesses of pid=234466
[2025-06-05 21:33:12] 2025-06-06 01:32:59,093 | INFO     | process IDs to be killed: [234466] (in reverse order)
[2025-06-05 21:33:12] 2025-06-06 01:32:59,210 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 21:33:12] 2025-06-06 01:32:59,211 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 21:33:12] 2025-06-06 01:32:59,220 | INFO     | did not find any defunct processes belonging to 234466
[2025-06-05 21:33:12] 2025-06-06 01:32:59,229 | INFO     | did not find any defunct processes belonging to 234466
[2025-06-05 21:33:12] 2025-06-06 01:32:59,229 | INFO     | ready for new job
[2025-06-05 21:33:12] 2025-06-06 01:32:59,229 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 21:33:12] 2025-06-06 01:32:59,231 | INFO     | **************************************
[2025-06-05 21:33:12] 2025-06-06 01:32:59,231 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 21:33:12] 2025-06-06 01:32:59,231 | INFO     | **************************************
[2025-06-05 21:33:12] 2025-06-06 01:32:59,231 | INFO     | 
[2025-06-05 21:33:12] 2025-06-06 01:32:59,236 | INFO     | architecture information:
[2025-06-05 21:33:12] 2025-06-06 01:32:59,237 | INFO     | executing command: cat /etc/os-release
[2025-06-05 21:33:12] 2025-06-06 01:32:59,256 | INFO     | cat /etc/os-release:
[2025-06-05 21:33:12] NAME="CentOS Linux"
[2025-06-05 21:33:12] VERSION="7 (Core)"
[2025-06-05 21:33:12] ID="centos"
[2025-06-05 21:33:12] ID_LIKE="rhel fedora"
[2025-06-05 21:33:12] VERSION_ID="7"
[2025-06-05 21:33:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 21:33:12] ANSI_COLOR="0;31"
[2025-06-05 21:33:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 21:33:12] HOME_URL="https://www.centos.org/"
[2025-06-05 21:33:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 21:33:12] 
[2025-06-05 21:33:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 21:33:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 21:33:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 21:33:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 21:33:12] 
[2025-06-05 21:33:12] 2025-06-06 01:32:59,256 | INFO     | **************************************
[2025-06-05 21:33:12] 2025-06-06 01:32:59,760 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-05 21:33:12] 2025-06-06 01:32:59,803 | INFO     | sufficient remaining disk space (106575167488 B)
[2025-06-05 21:33:12] 2025-06-06 01:32:59,804 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 21:33:12] 2025-06-06 01:32:59,804 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 21:33:12] 2025-06-06 01:32:59,804 | INFO     | update_server=False
[2025-06-05 21:33:12] 2025-06-06 01:32:59,804 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 21:33:12] 2025-06-06 01:32:59,804 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 21:33:12] 2025-06-06 01:32:59,810 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 21:33:12] 2025-06-06 01:32:59,811 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 21:33:12] 2025-06-06 01:32:59,811 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 21:33:12] 2025-06-06 01:32:59,811 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 21:33:12] 2025-06-06 01:32:59,927 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 21:33:12] 2025-06-06 01:33:00,067 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 21:33:12] 2025-06-06 01:33:00,067 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 21:33:12] 2025-06-06 01:33:00,067 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:33:12] 2025-06-06 01:33:00,067 | INFO     | will abort loop
[2025-06-05 21:33:12] 2025-06-06 01:33:00,096 | INFO     | all payload control threads have been joined
[2025-06-05 21:33:12] 2025-06-06 01:33:00,141 | INFO     | all job control threads have been joined
[2025-06-05 21:33:12] 2025-06-06 01:33:00,810 | INFO     | [job] retrieve thread has finished
[2025-06-05 21:33:12] 2025-06-06 01:33:00,814 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 21:33:12] 2025-06-06 01:33:00,822 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 21:33:12] 2025-06-06 01:33:00,908 | INFO     | all data control threads have been joined
[2025-06-05 21:33:12] 2025-06-06 01:33:00,910 | INFO     | [payload] failed_post thread has finished
[2025-06-05 21:33:12] 2025-06-06 01:33:01,009 | INFO     | [job] validate thread has finished
[2025-06-05 21:33:12] 2025-06-06 01:33:01,073 | INFO     | [job] job monitor thread has finished
[2025-06-05 21:33:12] 2025-06-06 01:33:01,103 | INFO     | [payload] control thread has finished
[2025-06-05 21:33:12] 2025-06-06 01:33:01,147 | INFO     | [job] control thread has finished
[2025-06-05 21:33:12] 2025-06-06 01:33:01,227 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 21:33:12] 2025-06-06 01:33:01,807 | INFO     | [data] copytool_in thread has finished
[2025-06-05 21:33:12] 2025-06-06 01:33:01,890 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:33:12] 2025-06-06 01:33:01,915 | INFO     | [data] control thread has finished
[2025-06-05 21:33:12] 2025-06-06 01:33:01,934 | INFO     | [data] copytool_out thread has finished
[2025-06-05 21:33:12] 2025-06-06 01:33:01,950 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 21:33:12] 2025-06-06 01:33:02,368 | INFO     | [payload] validate_post thread has finished
[2025-06-05 21:33:12] 2025-06-06 01:33:02,896 | INFO     | [job] queue monitor thread has finished
[2025-06-05 21:33:12] 2025-06-06 01:33:03,817 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 21:33:12] 2025-06-06 01:33:05,801 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139928050726720)>', '<ExcThread(monitor, started 139927459186432)>']
[2025-06-05 21:33:12] 2025-06-06 01:33:05,845 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 21:33:12] 2025-06-06 01:33:05,846 | INFO     | [monitor] control thread has ended
[2025-06-05 21:33:12] 2025-06-06 01:33:10,827 | INFO     | all workflow threads have been joined
[2025-06-05 21:33:12] 2025-06-06 01:33:10,827 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 21:33:12] 2025-06-06 01:33:10,827 | INFO     | traces error code: 0
[2025-06-05 21:33:12] 2025-06-06 01:33:10,828 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 21:33:12] 2025-06-06 01:33:11,083 [wrapper] ==== pilot stdout END ====
[2025-06-05 21:33:12] 2025-06-06 01:33:11,089 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 21:33:12] 2025-06-06 01:33:11,092 [wrapper] pilotpid: 218679
[2025-06-05 21:33:12] 2025-06-06 01:33:11,094 [wrapper] Pilot exit status: 0
[2025-06-05 21:33:12] 2025-06-06 01:33:11,273 [wrapper] pandaids: 6668992116
[2025-06-05 21:33:12] 2025-06-06 01:33:11,739 [wrapper] cleanup supervisor_pilot 106312 218680
[2025-06-05 21:33:12] 2025-06-06 01:33:11,819 [wrapper] Test setup, not cleaning
[2025-06-05 21:33:12] 2025-06-06 01:33:11,886 [wrapper] apfmon messages muted
[2025-06-05 21:33:12] 2025-06-06 01:33:11,893 [wrapper] ==== wrapper stdout END ====
[2025-06-05 21:33:12] 2025-06-06 01:33:11,900 [wrapper] ==== wrapper stderr END ====
[2025-06-05 21:33:12]  *** Error codes and diagnostics ***
[2025-06-05 21:33:12]     "exeErrorCode": 0,
[2025-06-05 21:33:12]     "exeErrorDiag": "",
[2025-06-05 21:33:12]     "pilotErrorCode": 0,
[2025-06-05 21:33:12]     "pilotErrorDiag": "",
[2025-06-05 21:33:12]  *** Listing of results directory ***
[2025-06-05 21:33:12] total 417888
[2025-06-05 21:33:12] -rw-r--r-- 1 boincer umatlas    495897 May 28 19:59 pilot3.tar.gz
[2025-06-05 21:33:12] -rw-r--r-- 1 boincer umatlas      5111 May 28 20:07 queuedata.json
[2025-06-05 21:33:12] -rwx------ 1 boincer umatlas     37140 May 28 20:07 runpilot2-wrapper.sh
[2025-06-05 21:33:12] -rw-r--r-- 1 boincer umatlas       100 Jun  5 16:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 21:33:12] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 16:13 run_atlas
[2025-06-05 21:33:12] -rw-r--r-- 1 boincer umatlas       105 Jun  5 16:13 job.xml
[2025-06-05 21:33:12] -rw-r--r-- 2 boincer umatlas 223515951 Jun  5 16:14 EVNT.44871834._003589.pool.root.1
[2025-06-05 21:33:12] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 16:14 start_atlas.sh
[2025-06-05 21:33:12] drwxrwx--x 2 boincer umatlas      4096 Jun  5 16:14 shared
[2025-06-05 21:33:12] -rw-r--r-- 2 boincer umatlas    508878 Jun  5 16:14 input.tar.gz
[2025-06-05 21:33:12] -rw-r--r-- 1 boincer umatlas         0 Jun  5 16:14 boinc_lockfile
[2025-06-05 21:33:12] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 16:14 pandaJob.out
[2025-06-05 21:33:12] -rw------- 1 boincer umatlas    987599 Jun  5 16:16 agis_schedconf.cvmfs.json
[2025-06-05 21:33:12] drwx------ 4 boincer umatlas      4096 Jun  5 16:17 pilot3
[2025-06-05 21:33:12] -rw-r--r-- 1 boincer umatlas      6299 Jun  5 21:29 init_data.xml
[2025-06-05 21:33:12] -rw------- 1 boincer umatlas 196524802 Jun  5 21:31 HITS.44871837._092272.pool.root.1
[2025-06-05 21:33:12] -rw-r--r-- 1 boincer umatlas       531 Jun  5 21:31 boinc_task_state.xml
[2025-06-05 21:33:12] -rw------- 1 boincer umatlas      1064 Jun  5 21:32 memory_monitor_summary.json
[2025-06-05 21:33:12] -rw------- 1 boincer umatlas   1598969 Jun  5 21:32 agis_ddmendpoints.agis.ALL.json
[2025-06-05 21:33:12] -rw------- 1 boincer umatlas    429390 Jun  5 21:32 log.44871837._092272.job.log.tgz.1
[2025-06-05 21:33:12] -rw------- 1 boincer umatlas        95 Jun  5 21:32 pilot_heartbeat.json
[2025-06-05 21:33:12] -rw------- 1 boincer umatlas      7770 Jun  5 21:32 heartbeat.json
[2025-06-05 21:33:12] -rw-r--r-- 1 boincer umatlas        28 Jun  5 21:33 wrapper_checkpoint.txt
[2025-06-05 21:33:12] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 21:33 boinc_mmap_file
[2025-06-05 21:33:12] -rw------- 1 boincer umatlas      4663 Jun  5 21:33 pilotlog.txt
[2025-06-05 21:33:12] -rw------- 1 boincer umatlas   1593023 Jun  5 21:33 log.44871837._092272.job.log.1
[2025-06-05 21:33:12] -rw------- 1 boincer umatlas       357 Jun  5 21:33 output.list
[2025-06-05 21:33:12] -rw-r--r-- 1 boincer umatlas       620 Jun  5 21:33 runtime_log
[2025-06-05 21:33:12] -rw------- 1 boincer umatlas   2037760 Jun  5 21:33 result.tar.gz
[2025-06-05 21:33:12] -rw-r--r-- 1 boincer umatlas      8670 Jun  5 21:33 runtime_log.err
[2025-06-05 21:33:12] -rw------- 1 boincer umatlas       664 Jun  5 21:33 2kiLDmXzfe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxMdKDma92H8n.diag
[2025-06-05 21:33:12] -rw-r--r-- 1 boincer umatlas     20910 Jun  5 21:33 stderr.txt
[2025-06-05 21:33:12] HITS file was successfully produced:
[2025-06-05 21:33:12] -rw------- 1 boincer umatlas 196524802 Jun  5 21:31 shared/HITS.pool.root.1
[2025-06-05 21:33:12]  *** Contents of shared directory: ***
[2025-06-05 21:33:12] total 412716
[2025-06-05 21:33:12] -rw-r--r-- 2 boincer umatlas 223515951 Jun  5 16:14 ATLAS.root_0
[2025-06-05 21:33:12] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 16:14 start_atlas.sh
[2025-06-05 21:33:12] -rw-r--r-- 2 boincer umatlas    508878 Jun  5 16:14 input.tar.gz
[2025-06-05 21:33:12] -rw------- 1 boincer umatlas 196524802 Jun  5 21:31 HITS.pool.root.1
[2025-06-05 21:33:12] -rw------- 1 boincer umatlas   2037760 Jun  5 21:33 result.tar.gz
21:33:13 (210318): run_atlas exited; CPU time 58112.317939
21:33:13 (210318): called boinc_finish(0)

</stderr_txt>
]]>

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