Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:17:00 (2296627): wrapper (7.7.26015): starting
17:17:00 (2296627): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 17:17:00] Arguments: --nthreads 12
[2025-06-05 17:17:00] Threads: 12
[2025-06-05 17:17:00] Checking for CVMFS
[2025-06-05 17:17:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 17:17:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 17:17:01] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 17:17:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 17:17:01] 2.12.6.0 5554 2789 158676 146833 2 70 30961883 32935937 11343 16776704 0 8628495 99.645 6146537 31396 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 17:17:01] CVMFS is ok
[2025-06-05 17:17:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 17:17:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 17:17:01] Further information can be found at the LHC@home message board.
[2025-06-05 17:17:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 17:17:01] Checking for apptainer binary...
[2025-06-05 17:17:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 17:17:01] Running /usr/bin/apptainer --version
[2025-06-05 17:17:01] apptainer version 1.4.1-1.el9
[2025-06-05 17:17:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 17:17:02] c6-1-26-2.aglt2.org
[2025-06-05 17:17:02] apptainer works
[2025-06-05 17:17:02] Set ATHENA_PROC_NUMBER=12
[2025-06-05 17:17:02] Set ATHENA_CORE_NUMBER=12
[2025-06-05 17:17:02] Starting ATLAS job with PandaID=6668992947
[2025-06-05 17:17:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 19:54:54]  *** The last 200 lines of the pilot log: ***
[2025-06-05 19:54:54] 2025-06-05 23:54:33,360 | INFO     | executing command: lscpu
[2025-06-05 19:54:54] 2025-06-05 23:54:33,432 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 19:54:54] 2025-06-05 23:54:33,578 | INFO     | monitor loop #630: job 0:6668992947 is in state 'finished'
[2025-06-05 19:54:54] 2025-06-05 23:54:33,578 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 19:54:54] 2025-06-05 23:54:36,083 | INFO     | monitor loop #631: job 0:6668992947 is in state 'finished'
[2025-06-05 19:54:54] 2025-06-05 23:54:36,094 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 19:54:54] 2025-06-05 23:54:38,599 | INFO     | monitor loop #632: job 0:6668992947 is in state 'finished'
[2025-06-05 19:54:54] 2025-06-05 23:54:38,599 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 19:54:54] 2025-06-05 23:54:40,676 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 19:54:54] 2025-06-05 23:54:40,676 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668992947/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 19:54:54] 2025-06-05 23:54:40,677 | INFO     | extracted standard info from prmon json
[2025-06-05 19:54:54] 2025-06-05 23:54:40,677 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 19:54:54] 2025-06-05 23:54:40,677 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 19:54:54] 2025-06-05 23:54:40,678 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 19:54:54] 2025-06-05 23:54:40,678 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 19:54:54] 2025-06-05 23:54:40,681 | INFO     | fitting pss+swap vs Time
[2025-06-05 19:54:54] 2025-06-05 23:54:40,682 | INFO     | sum of square deviations: 1132536010.2597442
[2025-06-05 19:54:54] 2025-06-05 23:54:40,683 | INFO     | sum of deviations: -26344748781.64936
[2025-06-05 19:54:54] 2025-06-05 23:54:40,683 | INFO     | mean x: 1749162959.8441558
[2025-06-05 19:54:54] 2025-06-05 23:54:40,683 | INFO     | mean y: 2451422.3896103897
[2025-06-05 19:54:54] 2025-06-05 23:54:40,683 | INFO     | -- intersect: 40691010848.14412
[2025-06-05 19:54:54] 2025-06-05 23:54:40,683 | INFO     | intersect: 40691010848.14412
[2025-06-05 19:54:54] 2025-06-05 23:54:40,683 | INFO     | chi2: 2.1111560275318446
[2025-06-05 19:54:54] 2025-06-05 23:54:40,684 | INFO     | sum of square deviations: 1025778231.8523498
[2025-06-05 19:54:54] 2025-06-05 23:54:40,684 | INFO     | sum of deviations: -21681056781.791946
[2025-06-05 19:54:54] 2025-06-05 23:54:40,685 | INFO     | mean x: 1749162807.3489933
[2025-06-05 19:54:54] 2025-06-05 23:54:40,685 | INFO     | mean y: 2458040.053691275
[2025-06-05 19:54:54] 2025-06-05 23:54:40,685 | INFO     | -- intersect: 36973117944.046326
[2025-06-05 19:54:54] 2025-06-05 23:54:40,685 | INFO     | intersect: 36973117944.046326
[2025-06-05 19:54:54] 2025-06-05 23:54:40,685 | INFO     | chi2: 2.099941570619834
[2025-06-05 19:54:54] 2025-06-05 23:54:40,685 | INFO     | current chi2=2.099941570619834 (change=0.5311998149715901 %)
[2025-06-05 19:54:54] 2025-06-05 23:54:40,685 | INFO     | right removable region: 148
[2025-06-05 19:54:54] 2025-06-05 23:54:40,686 | INFO     | sum of square deviations: 1025755052.1476489
[2025-06-05 19:54:54] 2025-06-05 23:54:40,686 | INFO     | sum of deviations: -52478596517.201355
[2025-06-05 19:54:54] 2025-06-05 23:54:40,686 | INFO     | mean x: 1749163112.3557048
[2025-06-05 19:54:54] 2025-06-05 23:54:40,686 | INFO     | mean y: 2488322.0604026844
[2025-06-05 19:54:54] 2025-06-05 23:54:40,687 | INFO     | -- intersect: 89491323910.92401
[2025-06-05 19:54:54] 2025-06-05 23:54:40,687 | INFO     | intersect: 89491323910.92401
[2025-06-05 19:54:54] 2025-06-05 23:54:40,687 | INFO     | chi2: 0.37998775873247576
[2025-06-05 19:54:54] 2025-06-05 23:54:40,687 | INFO     | current chi2=0.37998775873247576 (change=82.00096280061688 %)
[2025-06-05 19:54:54] 2025-06-05 23:54:40,687 | INFO     | sum of square deviations: 925904456.493055
[2025-06-05 19:54:54] 2025-06-05 23:54:40,688 | INFO     | sum of deviations: -51067604472.326416
[2025-06-05 19:54:54] 2025-06-05 23:54:40,688 | INFO     | mean x: 1749163264.8680556
[2025-06-05 19:54:54] 2025-06-05 23:54:40,688 | INFO     | mean y: 2486079.298611111
[2025-06-05 19:54:54] 2025-06-05 23:54:40,688 | INFO     | -- intersect: 96476347006.73546
[2025-06-05 19:54:54] 2025-06-05 23:54:40,688 | INFO     | intersect: 96476347006.73546
[2025-06-05 19:54:54] 2025-06-05 23:54:40,688 | INFO     | chi2: 0.3398153313462065
[2025-06-05 19:54:54] 2025-06-05 23:54:40,689 | INFO     | current chi2=0.3398153313462065 (change=10.572031983417656 %)
[2025-06-05 19:54:54] 2025-06-05 23:54:40,689 | INFO     | left removable region: 20
[2025-06-05 19:54:54] 2025-06-05 23:54:40,689 | INFO     | sum of square deviations: 650276502.875
[2025-06-05 19:54:54] 2025-06-05 23:54:40,689 | INFO     | sum of deviations: -35228903413.25
[2025-06-05 19:54:54] 2025-06-05 23:54:40,690 | INFO     | mean x: 1749163386.90625
[2025-06-05 19:54:54] 2025-06-05 23:54:40,690 | INFO     | mean y: 2475764.5625
[2025-06-05 19:54:54] 2025-06-05 23:54:40,690 | INFO     | -- intersect: 94763869939.0014
[2025-06-05 19:54:54] 2025-06-05 23:54:40,690 | INFO     | intersect: 94763869939.0014
[2025-06-05 19:54:54] 2025-06-05 23:54:40,690 | INFO     | chi2: 0.31763312255263404
[2025-06-05 19:54:54] 2025-06-05 23:54:40,690 | INFO     | -- intersect: 94763869939.0014
[2025-06-05 19:54:54] 2025-06-05 23:54:40,690 | INFO     | current memory leak: -54.18 B/s (using 128 data points, chi2=0.32)
[2025-06-05 19:54:54] 2025-06-05 23:54:40,691 | INFO     | ..............................
[2025-06-05 19:54:54] 2025-06-05 23:54:40,691 | INFO     | . Timing measurements:
[2025-06-05 19:54:54] 2025-06-05 23:54:40,691 | INFO     | . get job = 0 s
[2025-06-05 19:54:54] 2025-06-05 23:54:40,691 | INFO     | . initial setup = 3 s
[2025-06-05 19:54:54] 2025-06-05 23:54:40,691 | INFO     | . payload setup = 12 s
[2025-06-05 19:54:54] 2025-06-05 23:54:40,691 | INFO     | . stage-in = 0 s
[2025-06-05 19:54:54] 2025-06-05 23:54:40,691 | INFO     | . payload execution = 9380 s
[2025-06-05 19:54:54] 2025-06-05 23:54:40,691 | INFO     | . stage-out = 0 s
[2025-06-05 19:54:54] 2025-06-05 23:54:40,691 | INFO     | . log creation = 0 s
[2025-06-05 19:54:54] 2025-06-05 23:54:40,692 | INFO     | ..............................
[2025-06-05 19:54:54] 2025-06-05 23:54:40,829 | INFO     | 
[2025-06-05 19:54:54] 2025-06-05 23:54:40,829 | INFO     | job summary report
[2025-06-05 19:54:54] 2025-06-05 23:54:40,829 | INFO     | --------------------------------------------------
[2025-06-05 19:54:54] 2025-06-05 23:54:40,829 | INFO     | PanDA job id: 6668992947
[2025-06-05 19:54:54] 2025-06-05 23:54:40,830 | INFO     | task id: 44871837
[2025-06-05 19:54:54] 2025-06-05 23:54:40,830 | INFO     | errors: (none)
[2025-06-05 19:54:54] 2025-06-05 23:54:40,830 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 19:54:54] 2025-06-05 23:54:40,830 | INFO     | pilot state: finished 
[2025-06-05 19:54:54] 2025-06-05 23:54:40,830 | INFO     | transexitcode: 0
[2025-06-05 19:54:54] 2025-06-05 23:54:40,830 | INFO     | exeerrorcode: 0
[2025-06-05 19:54:54] 2025-06-05 23:54:40,830 | INFO     | exeerrordiag: 
[2025-06-05 19:54:54] 2025-06-05 23:54:40,830 | INFO     | exitcode: 0
[2025-06-05 19:54:54] 2025-06-05 23:54:40,830 | INFO     | exitmsg: OK
[2025-06-05 19:54:54] 2025-06-05 23:54:40,830 | INFO     | cpuconsumptiontime: 48579 s
[2025-06-05 19:54:54] 2025-06-05 23:54:40,831 | INFO     | nevents: 400
[2025-06-05 19:54:54] 2025-06-05 23:54:40,831 | INFO     | neventsw: 0
[2025-06-05 19:54:54] 2025-06-05 23:54:40,831 | INFO     | pid: 2308228
[2025-06-05 19:54:54] 2025-06-05 23:54:40,831 | INFO     | pgrp: 2308228
[2025-06-05 19:54:54] 2025-06-05 23:54:40,831 | INFO     | corecount: 12
[2025-06-05 19:54:54] 2025-06-05 23:54:40,831 | INFO     | event service: False
[2025-06-05 19:54:54] 2025-06-05 23:54:40,831 | INFO     | sizes: {0: 2397221, 1: 2397420, 11: 2397626, 12: 2397654, 9397: 2426082, 9398: 2435207, 9409: 2435321}
[2025-06-05 19:54:54] 2025-06-05 23:54:40,831 | INFO     | --------------------------------------------------
[2025-06-05 19:54:54] 2025-06-05 23:54:40,831 | INFO     | 
[2025-06-05 19:54:54] 2025-06-05 23:54:40,831 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 19:54:54] 2025-06-05 23:54:40,855 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 19:54:54] 2025-06-05 23:54:40,856 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 19:54:54] 2025-06-05 23:54:40,856 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 19:54:54] 2025-06-05 23:54:40,856 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 19:54:54] 2025-06-05 23:54:40,856 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 19:54:54] 2025-06-05 23:54:40,856 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 19:54:54] 2025-06-05 23:54:40,856 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 19:54:54] 2025-06-05 23:54:40,857 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 19:54:54] 2025-06-05 23:54:40,857 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 19:54:54] 2025-06-05 23:54:40,857 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 19:54:54] 2025-06-05 23:54:40,857 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 19:54:54] 2025-06-05 23:54:40,857 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 19:54:54] 2025-06-05 23:54:40,857 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 19:54:54] 2025-06-05 23:54:40,857 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 19:54:54] 2025-06-05 23:54:40,857 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 19:54:54] 2025-06-05 23:54:40,857 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 19:54:54] 2025-06-05 23:54:40,857 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 19:54:54] 2025-06-05 23:54:40,858 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 19:54:54] 2025-06-05 23:54:40,858 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 19:54:54] 2025-06-05 23:54:40,858 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 19:54:54] 2025-06-05 23:54:40,858 | INFO     | job 6668992947 has completed (purged errors)
[2025-06-05 19:54:54] 2025-06-05 23:54:40,858 | INFO     | overall cleanup function is called
[2025-06-05 19:54:54] 2025-06-05 23:54:41,867 | INFO     | --- collectZombieJob: --- 10, [2308228]
[2025-06-05 19:54:54] 2025-06-05 23:54:41,867 | INFO     | zombie collector waiting for pid 2308228
[2025-06-05 19:54:54] 2025-06-05 23:54:41,867 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 19:54:54] 2025-06-05 23:54:41,867 | INFO     | collected zombie processes
[2025-06-05 19:54:54] 2025-06-05 23:54:41,867 | INFO     | will attempt to kill all subprocesses of pid=2308228
[2025-06-05 19:54:54] 2025-06-05 23:54:42,203 | INFO     | process IDs to be killed: [2308228] (in reverse order)
[2025-06-05 19:54:54] 2025-06-05 23:54:42,352 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 19:54:54] 2025-06-05 23:54:42,353 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 19:54:54] 2025-06-05 23:54:42,371 | INFO     | did not find any defunct processes belonging to 2308228
[2025-06-05 19:54:54] 2025-06-05 23:54:42,388 | INFO     | did not find any defunct processes belonging to 2308228
[2025-06-05 19:54:54] 2025-06-05 23:54:42,392 | INFO     | ready for new job
[2025-06-05 19:54:54] 2025-06-05 23:54:42,392 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 19:54:54] 2025-06-05 23:54:42,394 | INFO     | **************************************
[2025-06-05 19:54:54] 2025-06-05 23:54:42,394 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 19:54:54] 2025-06-05 23:54:42,394 | INFO     | **************************************
[2025-06-05 19:54:54] 2025-06-05 23:54:42,394 | INFO     | 
[2025-06-05 19:54:54] 2025-06-05 23:54:42,411 | INFO     | architecture information:
[2025-06-05 19:54:54] 2025-06-05 23:54:42,411 | INFO     | executing command: cat /etc/os-release
[2025-06-05 19:54:54] 2025-06-05 23:54:42,428 | INFO     | cat /etc/os-release:
[2025-06-05 19:54:54] NAME="CentOS Linux"
[2025-06-05 19:54:54] VERSION="7 (Core)"
[2025-06-05 19:54:54] ID="centos"
[2025-06-05 19:54:54] ID_LIKE="rhel fedora"
[2025-06-05 19:54:54] VERSION_ID="7"
[2025-06-05 19:54:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 19:54:54] ANSI_COLOR="0;31"
[2025-06-05 19:54:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 19:54:54] HOME_URL="https://www.centos.org/"
[2025-06-05 19:54:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 19:54:54] 
[2025-06-05 19:54:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 19:54:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 19:54:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 19:54:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 19:54:54] 
[2025-06-05 19:54:54] 2025-06-05 23:54:42,428 | INFO     | **************************************
[2025-06-05 19:54:54] 2025-06-05 23:54:42,931 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 19:54:54] 2025-06-05 23:54:42,960 | INFO     | sufficient remaining disk space (76481036288 B)
[2025-06-05 19:54:54] 2025-06-05 23:54:42,960 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 19:54:54] 2025-06-05 23:54:42,960 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 19:54:54] 2025-06-05 23:54:42,960 | INFO     | update_server=False
[2025-06-05 19:54:54] 2025-06-05 23:54:42,960 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 19:54:54] 2025-06-05 23:54:42,960 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 19:54:54] 2025-06-05 23:54:42,961 | INFO     | aborting loop
[2025-06-05 19:54:54] 2025-06-05 23:54:42,961 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 19:54:54] 2025-06-05 23:54:43,131 | INFO     | all job control threads have been joined
[2025-06-05 19:54:54] 2025-06-05 23:54:43,533 | INFO     | all payload control threads have been joined
[2025-06-05 19:54:54] 2025-06-05 23:54:43,547 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 19:54:54] 2025-06-05 23:54:43,547 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 19:54:54] 2025-06-05 23:54:43,547 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 19:54:54] 2025-06-05 23:54:43,664 | INFO     | all data control threads have been joined
[2025-06-05 19:54:54] 2025-06-05 23:54:43,966 | INFO     | [job] retrieve thread has finished
[2025-06-05 19:54:54] 2025-06-05 23:54:43,966 | INFO     | [job] job monitor thread has finished
[2025-06-05 19:54:54] 2025-06-05 23:54:44,137 | INFO     | [job] control thread has finished
[2025-06-05 19:54:54] 2025-06-05 23:54:44,176 | INFO     | [payload] failed_post thread has finished
[2025-06-05 19:54:54] 2025-06-05 23:54:44,230 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 19:54:54] 2025-06-05 23:54:44,262 | INFO     | [payload] validate_post thread has finished
[2025-06-05 19:54:54] 2025-06-05 23:54:44,539 | INFO     | [payload] control thread has finished
[2025-06-05 19:54:54] 2025-06-05 23:54:44,619 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 19:54:54] 2025-06-05 23:54:44,670 | INFO     | [data] control thread has finished
[2025-06-05 19:54:54] 2025-06-05 23:54:44,679 | INFO     | [data] copytool_in thread has finished
[2025-06-05 19:54:54] 2025-06-05 23:54:44,786 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 19:54:54] 2025-06-05 23:54:44,948 | INFO     | [job] validate thread has finished
[2025-06-05 19:54:54] 2025-06-05 23:54:44,968 | INFO     | [data] copytool_out thread has finished
[2025-06-05 19:54:54] 2025-06-05 23:54:45,179 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 19:54:54] 2025-06-05 23:54:45,424 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 19:54:54] 2025-06-05 23:54:45,804 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 19:54:54] 2025-06-05 23:54:46,810 | INFO     | [job] queue monitor thread has finished
[2025-06-05 19:54:54] 2025-06-05 23:54:49,432 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 19:54:54] 2025-06-05 23:54:49,564 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140371873265472)>', '<ExcThread(monitor, started 140371073955584)>']
[2025-06-05 19:54:54] 2025-06-05 23:54:49,583 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 19:54:54] 2025-06-05 23:54:49,583 | INFO     | [monitor] control thread has ended
[2025-06-05 19:54:54] 2025-06-05 23:54:54,590 | INFO     | all workflow threads have been joined
[2025-06-05 19:54:54] 2025-06-05 23:54:54,590 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 19:54:54] 2025-06-05 23:54:54,591 | INFO     | traces error code: 0
[2025-06-05 19:54:54] 2025-06-05 23:54:54,591 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 19:54:54] 2025-06-05 23:54:54,758 [wrapper] ==== pilot stdout END ====
[2025-06-05 19:54:54] 2025-06-05 23:54:54,760 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 19:54:54] 2025-06-05 23:54:54,763 [wrapper] pilotpid: 2300899
[2025-06-05 19:54:54] 2025-06-05 23:54:54,765 [wrapper] Pilot exit status: 0
[2025-06-05 19:54:54] 2025-06-05 23:54:54,778 [wrapper] pandaids: 6668992947
[2025-06-05 19:54:54] 2025-06-05 23:54:54,833 [wrapper] cleanup supervisor_pilot 2532915 2300900
[2025-06-05 19:54:54] 2025-06-05 23:54:54,837 [wrapper] Test setup, not cleaning
[2025-06-05 19:54:54] 2025-06-05 23:54:54,853 [wrapper] apfmon messages muted
[2025-06-05 19:54:54] 2025-06-05 23:54:54,873 [wrapper] ==== wrapper stdout END ====
[2025-06-05 19:54:54] 2025-06-05 23:54:54,877 [wrapper] ==== wrapper stderr END ====
[2025-06-05 19:54:54]  *** Error codes and diagnostics ***
[2025-06-05 19:54:54]     "exeErrorCode": 0,
[2025-06-05 19:54:54]     "exeErrorDiag": "",
[2025-06-05 19:54:54]     "pilotErrorCode": 0,
[2025-06-05 19:54:54]     "pilotErrorDiag": "",
[2025-06-05 19:54:54]  *** Listing of results directory ***
[2025-06-05 19:54:54] total 415752
[2025-06-05 19:54:54] -rw-r--r--. 1 boincer umatlas    495897 May 28 20:19 pilot3.tar.gz
[2025-06-05 19:54:54] -rwx------. 1 boincer umatlas     37140 May 28 20:22 runpilot2-wrapper.sh
[2025-06-05 19:54:54] -rw-r--r--. 1 boincer umatlas      5111 May 28 20:22 queuedata.json
[2025-06-05 19:54:54] -rw-r--r--. 1 boincer umatlas       100 Jun  5 17:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 19:54:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 17:17 run_atlas
[2025-06-05 19:54:54] -rw-r--r--. 1 boincer umatlas       105 Jun  5 17:17 job.xml
[2025-06-05 19:54:54] -rw-r--r--. 2 boincer umatlas 223752332 Jun  5 17:17 EVNT.44871834._003597.pool.root.1
[2025-06-05 19:54:54] -rw-r--r--. 2 boincer umatlas    508877 Jun  5 17:17 input.tar.gz
[2025-06-05 19:54:54] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 17:17 start_atlas.sh
[2025-06-05 19:54:54] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 17:17 shared
[2025-06-05 19:54:54] -rw-r--r--. 1 boincer umatlas         0 Jun  5 17:17 boinc_lockfile
[2025-06-05 19:54:54] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 17:17 pandaJob.out
[2025-06-05 19:54:54] -rw-------. 1 boincer umatlas    987599 Jun  5 17:17 agis_schedconf.cvmfs.json
[2025-06-05 19:54:54] -rw-------. 1 boincer umatlas   1598969 Jun  5 17:17 agis_ddmendpoints.agis.ALL.json
[2025-06-05 19:54:54] drwx------. 4 boincer umatlas      4096 Jun  5 17:17 pilot3
[2025-06-05 19:54:54] -rw-r--r--. 1 boincer umatlas      6842 Jun  5 19:48 init_data.xml
[2025-06-05 19:54:54] -rw-------. 1 boincer umatlas 195654358 Jun  5 19:53 HITS.44871837._092474.pool.root.1
[2025-06-05 19:54:54] -rw-r--r--. 1 boincer umatlas       529 Jun  5 19:53 boinc_task_state.xml
[2025-06-05 19:54:54] -rw-------. 1 boincer umatlas      1040 Jun  5 19:54 memory_monitor_summary.json
[2025-06-05 19:54:54] -rw-------. 1 boincer umatlas    404366 Jun  5 19:54 log.44871837._092474.job.log.tgz.1
[2025-06-05 19:54:54] -rw-------. 1 boincer umatlas        95 Jun  5 19:54 pilot_heartbeat.json
[2025-06-05 19:54:54] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 19:54 boinc_mmap_file
[2025-06-05 19:54:54] -rw-r--r--. 1 boincer umatlas        27 Jun  5 19:54 wrapper_checkpoint.txt
[2025-06-05 19:54:54] -rw-------. 1 boincer umatlas      7718 Jun  5 19:54 heartbeat.json
[2025-06-05 19:54:54] -rw-------. 1 boincer umatlas      4353 Jun  5 19:54 pilotlog.txt
[2025-06-05 19:54:54] -rw-------. 1 boincer umatlas    840763 Jun  5 19:54 log.44871837._092474.job.log.1
[2025-06-05 19:54:54] -rw-------. 1 boincer umatlas       357 Jun  5 19:54 output.list
[2025-06-05 19:54:54] -rw-r--r--. 1 boincer umatlas       620 Jun  5 19:54 runtime_log
[2025-06-05 19:54:54] -rw-------. 1 boincer umatlas   1259520 Jun  5 19:54 result.tar.gz
[2025-06-05 19:54:54] -rw-r--r--. 1 boincer umatlas      8666 Jun  5 19:54 runtime_log.err
[2025-06-05 19:54:54] -rw-------. 1 boincer umatlas       654 Jun  5 19:54 bQoMDm6Dge7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKPdKDmhpgCTo.diag
[2025-06-05 19:54:54] -rw-r--r--. 1 boincer umatlas     21188 Jun  5 19:54 stderr.txt
[2025-06-05 19:54:55] HITS file was successfully produced:
[2025-06-05 19:54:55] -rw-------. 1 boincer umatlas 195654358 Jun  5 19:53 shared/HITS.pool.root.1
[2025-06-05 19:54:55]  *** Contents of shared directory: ***
[2025-06-05 19:54:55] total 411336
[2025-06-05 19:54:55] -rw-r--r--. 2 boincer umatlas 223752332 Jun  5 17:17 ATLAS.root_0
[2025-06-05 19:54:55] -rw-r--r--. 2 boincer umatlas    508877 Jun  5 17:17 input.tar.gz
[2025-06-05 19:54:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 17:17 start_atlas.sh
[2025-06-05 19:54:55] -rw-------. 1 boincer umatlas 195654358 Jun  5 19:53 HITS.pool.root.1
[2025-06-05 19:54:55] -rw-------. 1 boincer umatlas   1259520 Jun  5 19:54 result.tar.gz
19:54:56 (2296627): run_atlas exited; CPU time 48771.612389
19:54:56 (2296627): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN