Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:02:07 (29533): wrapper (7.7.26015): starting
16:02:07 (29533): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 16:02:07] Arguments: --nthreads 12
[2025-06-05 16:02:07] Threads: 12
[2025-06-05 16:02:07] Checking for CVMFS
[2025-06-05 16:02:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 16:02:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 16:02:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 16:02:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 16:02:08] 2.11.2.0 2924 37529 93520 146830 0 1 20203907 20275201 1 130560 0 17104709 99.982 7342320 8707 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 16:02:08] CVMFS is ok
[2025-06-05 16:02:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 16:02:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 16:02:08] Further information can be found at the LHC@home message board.
[2025-06-05 16:02:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 16:02:08] Checking for apptainer binary...
[2025-06-05 16:02:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 16:02:08] Running /usr/bin/apptainer --version
[2025-06-05 16:02:08] apptainer version 1.3.2-1.el7
[2025-06-05 16:02:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 16:02:09] c-205-28.aglt2.org
[2025-06-05 16:02:09] apptainer works
[2025-06-05 16:02:09] Set ATHENA_PROC_NUMBER=12
[2025-06-05 16:02:09] Set ATHENA_CORE_NUMBER=12
[2025-06-05 16:02:09] Starting ATLAS job with PandaID=6668531706
[2025-06-05 16:02:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 17:31:38]  *** The last 200 lines of the pilot log: ***
[2025-06-05 17:31:38]  guid=92709916-9279-4129-b695-072e97fa118b
[2025-06-05 17:31:38]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 17:31:38]  is_altstaged=None
[2025-06-05 17:31:38]  is_tar=False
[2025-06-05 17:31:38]  lfn=log.44871837._085463.job.log.tgz.1
[2025-06-05 17:31:38]  mtime=0
[2025-06-05 17:31:38]  protocol_id=None
[2025-06-05 17:31:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 17:31:38]  replicas=None
[2025-06-05 17:31:38]  scope=mc23_13p6TeV
[2025-06-05 17:31:38]  status=None
[2025-06-05 17:31:38]  status_code=0
[2025-06-05 17:31:38]  storage_token=
[2025-06-05 17:31:38]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668531706/log.44871837._085463.job.log.tgz.1
[2025-06-05 17:31:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/00/log.44871837._085463.job.log.tgz.1
[2025-06-05 17:31:38]  workdir=None
[2025-06-05 17:31:38] ]
[2025-06-05 17:31:38] 2025-06-05 21:31:18,457 | INFO     | transferring file log.44871837._085463.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668531706/log.44871837._085463.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 17:31:38] 2025-06-05 21:31:18,457 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668531706/log.44871837._085463.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._085463.job
[2025-06-05 17:31:38] 2025-06-05 21:31:18,477 | INFO     | adding to output.list: log.44871837._085463.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/00/log.44871837._085463.job.log.tg
[2025-06-05 17:31:38] 2025-06-05 21:31:18,478 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 17:31:38] 2025-06-05 21:31:18,478 | INFO     | summary of transferred files:
[2025-06-05 17:31:38] 2025-06-05 21:31:18,478 | INFO     |  -- lfn=log.44871837._085463.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 17:31:38] 2025-06-05 21:31:18,479 | INFO     | stage-out finished correctly
[2025-06-05 17:31:38] 2025-06-05 21:31:18,944 | INFO     | monitor loop #399: job 0:6668531706 is in state 'finished'
[2025-06-05 17:31:38] 2025-06-05 21:31:18,945 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:31:38] 2025-06-05 21:31:21,448 | INFO     | monitor loop #400: job 0:6668531706 is in state 'finished'
[2025-06-05 17:31:38] 2025-06-05 21:31:21,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:31:38] 2025-06-05 21:31:21,600 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 17:31:38] 2025-06-05 21:31:21,682 | INFO     | job 6668531706 has state=finished
[2025-06-05 17:31:38] 2025-06-05 21:31:21,682 | INFO     | preparing for final server update for job 6668531706 in state='finished'
[2025-06-05 17:31:38] 2025-06-05 21:31:21,683 | INFO     | this job has now completed (state=finished)
[2025-06-05 17:31:38] 2025-06-05 21:31:21,683 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 17:31:38] 2025-06-05 21:31:21,683 | INFO     | log transfer has been attempted: DONE
[2025-06-05 17:31:38] 2025-06-05 21:31:21,683 | INFO     | job 6668531706 has finished - writing final server update
[2025-06-05 17:31:38] 2025-06-05 21:31:21,684 | INFO     | total number of processed events: 400 (read)
[2025-06-05 17:31:38] 2025-06-05 21:31:21,685 | INFO     | executing command: lscpu
[2025-06-05 17:31:38] 2025-06-05 21:31:21,713 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 17:31:38] 2025-06-05 21:31:24,047 | INFO     | monitor loop #401: job 0:6668531706 is in state 'finished'
[2025-06-05 17:31:38] 2025-06-05 21:31:24,048 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:31:38] 2025-06-05 21:31:26,343 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 17:31:38] 2025-06-05 21:31:26,344 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668531706/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 17:31:38] 2025-06-05 21:31:26,345 | INFO     | extracted standard info from prmon json
[2025-06-05 17:31:38] 2025-06-05 21:31:26,345 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 17:31:38] 2025-06-05 21:31:26,345 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 17:31:38] 2025-06-05 21:31:26,346 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 17:31:38] 2025-06-05 21:31:26,346 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 17:31:38] 2025-06-05 21:31:26,349 | INFO     | fitting pss+swap vs Time
[2025-06-05 17:31:38] 2025-06-05 21:31:26,349 | INFO     | sum of square deviations: 158737860.0
[2025-06-05 17:31:38] 2025-06-05 21:31:26,350 | INFO     | sum of deviations: -1278266590.0
[2025-06-05 17:31:38] 2025-06-05 21:31:26,350 | INFO     | mean x: 1749156489.5
[2025-06-05 17:31:38] 2025-06-05 21:31:26,350 | INFO     | mean y: 2686322.45
[2025-06-05 17:31:38] 2025-06-05 21:31:26,350 | INFO     | -- intersect: 14088099224.00692
[2025-06-05 17:31:38] 2025-06-05 21:31:26,350 | INFO     | intersect: 14088099224.00692
[2025-06-05 17:31:38] 2025-06-05 21:31:26,351 | INFO     | chi2: 0.052218969770627316
[2025-06-05 17:31:38] 2025-06-05 21:31:26,351 | INFO     | -- intersect: 14088099224.00692
[2025-06-05 17:31:38] 2025-06-05 21:31:26,351 | INFO     | current memory leak: -8.05 B/s (using 80 data points, chi2=0.05)
[2025-06-05 17:31:38] 2025-06-05 21:31:26,352 | INFO     | ..............................
[2025-06-05 17:31:38] 2025-06-05 21:31:26,352 | INFO     | . Timing measurements:
[2025-06-05 17:31:38] 2025-06-05 21:31:26,352 | INFO     | . get job = 0 s
[2025-06-05 17:31:38] 2025-06-05 21:31:26,352 | INFO     | . initial setup = 3 s
[2025-06-05 17:31:38] 2025-06-05 21:31:26,352 | INFO     | . payload setup = 10 s
[2025-06-05 17:31:38] 2025-06-05 21:31:26,353 | INFO     | . stage-in = 0 s
[2025-06-05 17:31:38] 2025-06-05 21:31:26,353 | INFO     | . payload execution = 5304 s
[2025-06-05 17:31:38] 2025-06-05 21:31:26,353 | INFO     | . stage-out = 0 s
[2025-06-05 17:31:38] 2025-06-05 21:31:26,353 | INFO     | . log creation = 0 s
[2025-06-05 17:31:38] 2025-06-05 21:31:26,353 | INFO     | ..............................
[2025-06-05 17:31:38] 2025-06-05 21:31:26,437 | INFO     | 
[2025-06-05 17:31:38] 2025-06-05 21:31:26,437 | INFO     | job summary report
[2025-06-05 17:31:38] 2025-06-05 21:31:26,438 | INFO     | --------------------------------------------------
[2025-06-05 17:31:38] 2025-06-05 21:31:26,438 | INFO     | PanDA job id: 6668531706
[2025-06-05 17:31:38] 2025-06-05 21:31:26,438 | INFO     | task id: 44871837
[2025-06-05 17:31:38] 2025-06-05 21:31:26,438 | INFO     | errors: (none)
[2025-06-05 17:31:38] 2025-06-05 21:31:26,438 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 17:31:38] 2025-06-05 21:31:26,438 | INFO     | pilot state: finished 
[2025-06-05 17:31:38] 2025-06-05 21:31:26,439 | INFO     | transexitcode: 0
[2025-06-05 17:31:38] 2025-06-05 21:31:26,439 | INFO     | exeerrorcode: 0
[2025-06-05 17:31:38] 2025-06-05 21:31:26,439 | INFO     | exeerrordiag: 
[2025-06-05 17:31:38] 2025-06-05 21:31:26,439 | INFO     | exitcode: 0
[2025-06-05 17:31:38] 2025-06-05 21:31:26,439 | INFO     | exitmsg: OK
[2025-06-05 17:31:38] 2025-06-05 21:31:26,439 | INFO     | cpuconsumptiontime: 58373 s
[2025-06-05 17:31:38] 2025-06-05 21:31:26,439 | INFO     | nevents: 400
[2025-06-05 17:31:38] 2025-06-05 21:31:26,440 | INFO     | neventsw: 0
[2025-06-05 17:31:38] 2025-06-05 21:31:26,440 | INFO     | pid: 7347
[2025-06-05 17:31:38] 2025-06-05 21:31:26,440 | INFO     | pgrp: 7347
[2025-06-05 17:31:38] 2025-06-05 21:31:26,440 | INFO     | corecount: 12
[2025-06-05 17:31:38] 2025-06-05 21:31:26,440 | INFO     | event service: False
[2025-06-05 17:31:38] 2025-06-05 21:31:26,440 | INFO     | sizes: {0: 2397221, 1: 2397420, 6: 2397626, 11: 2397654, 5318: 2424013, 5319: 2432954, 5322: 2433138, 5327: 2433308}
[2025-06-05 17:31:38] 2025-06-05 21:31:26,441 | INFO     | --------------------------------------------------
[2025-06-05 17:31:38] 2025-06-05 21:31:26,441 | INFO     | 
[2025-06-05 17:31:38] 2025-06-05 21:31:26,441 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 17:31:38] 2025-06-05 21:31:26,464 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 17:31:38] 2025-06-05 21:31:26,469 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 17:31:38] 2025-06-05 21:31:26,469 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 17:31:38] 2025-06-05 21:31:26,469 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 17:31:38] 2025-06-05 21:31:26,469 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 17:31:38] 2025-06-05 21:31:26,469 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 17:31:38] 2025-06-05 21:31:26,469 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 17:31:38] 2025-06-05 21:31:26,470 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 17:31:38] 2025-06-05 21:31:26,470 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 17:31:38] 2025-06-05 21:31:26,470 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 17:31:38] 2025-06-05 21:31:26,470 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 17:31:38] 2025-06-05 21:31:26,470 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 17:31:38] 2025-06-05 21:31:26,470 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 17:31:38] 2025-06-05 21:31:26,471 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 17:31:38] 2025-06-05 21:31:26,471 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 17:31:38] 2025-06-05 21:31:26,471 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 17:31:38] 2025-06-05 21:31:26,471 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 17:31:38] 2025-06-05 21:31:26,471 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 17:31:38] 2025-06-05 21:31:26,471 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 17:31:38] 2025-06-05 21:31:26,472 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 17:31:38] 2025-06-05 21:31:26,472 | INFO     | job 6668531706 has completed (purged errors)
[2025-06-05 17:31:38] 2025-06-05 21:31:26,472 | INFO     | overall cleanup function is called
[2025-06-05 17:31:38] 2025-06-05 21:31:27,480 | INFO     | --- collectZombieJob: --- 10, [7347]
[2025-06-05 17:31:38] 2025-06-05 21:31:27,480 | INFO     | zombie collector waiting for pid 7347
[2025-06-05 17:31:38] 2025-06-05 21:31:27,480 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 17:31:38] 2025-06-05 21:31:27,480 | INFO     | collected zombie processes
[2025-06-05 17:31:38] 2025-06-05 21:31:27,480 | INFO     | will attempt to kill all subprocesses of pid=7347
[2025-06-05 17:31:38] 2025-06-05 21:31:27,573 | INFO     | process IDs to be killed: [7347] (in reverse order)
[2025-06-05 17:31:38] 2025-06-05 21:31:27,723 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 17:31:38] 2025-06-05 21:31:27,723 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 17:31:38] 2025-06-05 21:31:27,727 | INFO     | did not find any defunct processes belonging to 7347
[2025-06-05 17:31:38] 2025-06-05 21:31:27,730 | INFO     | did not find any defunct processes belonging to 7347
[2025-06-05 17:31:38] 2025-06-05 21:31:27,731 | INFO     | ready for new job
[2025-06-05 17:31:38] 2025-06-05 21:31:27,731 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 17:31:38] 2025-06-05 21:31:27,732 | INFO     | **************************************
[2025-06-05 17:31:38] 2025-06-05 21:31:27,733 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 17:31:38] 2025-06-05 21:31:27,733 | INFO     | **************************************
[2025-06-05 17:31:38] 2025-06-05 21:31:27,733 | INFO     | 
[2025-06-05 17:31:38] 2025-06-05 21:31:27,734 | INFO     | architecture information:
[2025-06-05 17:31:38] 2025-06-05 21:31:27,734 | INFO     | executing command: cat /etc/os-release
[2025-06-05 17:31:38] 2025-06-05 21:31:27,748 | INFO     | cat /etc/os-release:
[2025-06-05 17:31:38] NAME="CentOS Linux"
[2025-06-05 17:31:38] VERSION="7 (Core)"
[2025-06-05 17:31:38] ID="centos"
[2025-06-05 17:31:38] ID_LIKE="rhel fedora"
[2025-06-05 17:31:38] VERSION_ID="7"
[2025-06-05 17:31:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 17:31:38] ANSI_COLOR="0;31"
[2025-06-05 17:31:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 17:31:38] HOME_URL="https://www.centos.org/"
[2025-06-05 17:31:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 17:31:38] 
[2025-06-05 17:31:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 17:31:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 17:31:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 17:31:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 17:31:38] 
[2025-06-05 17:31:38] 2025-06-05 21:31:27,748 | INFO     | **************************************
[2025-06-05 17:31:38] 2025-06-05 21:31:28,251 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 17:31:38] 2025-06-05 21:31:28,269 | INFO     | sufficient remaining disk space (29385293824 B)
[2025-06-05 17:31:38] 2025-06-05 21:31:28,269 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 17:31:38] 2025-06-05 21:31:28,269 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 17:31:38] 2025-06-05 21:31:28,270 | INFO     | update_server=False
[2025-06-05 17:31:38] 2025-06-05 21:31:28,270 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 17:31:38] 2025-06-05 21:31:28,270 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:31:38] 2025-06-05 21:31:28,270 | INFO     | aborting loop
[2025-06-05 17:31:38] 2025-06-05 21:31:28,271 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:31:38] 2025-06-05 21:31:28,271 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 17:31:38] 2025-06-05 21:31:28,271 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 17:31:38] 2025-06-05 21:31:28,272 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 17:31:38] 2025-06-05 21:31:28,272 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 17:31:38] 2025-06-05 21:31:28,272 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 17:31:38] 2025-06-05 21:31:28,475 | INFO     | all data control threads have been joined
[2025-06-05 17:31:38] 2025-06-05 21:31:29,074 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 17:31:38] 2025-06-05 21:31:29,275 | INFO     | [job] retrieve thread has finished
[2025-06-05 17:31:38] 2025-06-05 21:31:29,276 | INFO     | [job] queue monitor thread has finished
[2025-06-05 17:31:38] 2025-06-05 21:31:29,277 | INFO     | [job] job monitor thread has finished
[2025-06-05 17:31:38] 2025-06-05 21:31:29,476 | INFO     | [data] control thread has finished
[2025-06-05 17:31:38] 2025-06-05 21:31:29,555 | INFO     | all payload control threads have been joined
[2025-06-05 17:31:38] 2025-06-05 21:31:29,641 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 17:31:38] 2025-06-05 21:31:29,664 | INFO     | all job control threads have been joined
[2025-06-05 17:31:38] 2025-06-05 21:31:29,749 | INFO     | [job] validate thread has finished
[2025-06-05 17:31:38] 2025-06-05 21:31:29,756 | INFO     | [data] copytool_in thread has finished
[2025-06-05 17:31:38] 2025-06-05 21:31:29,929 | INFO     | [payload] validate_post thread has finished
[2025-06-05 17:31:38] 2025-06-05 21:31:30,244 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 17:31:38] 2025-06-05 21:31:30,268 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 17:31:38] 2025-06-05 21:31:30,325 | INFO     | [payload] failed_post thread has finished
[2025-06-05 17:31:38] 2025-06-05 21:31:30,561 | INFO     | [payload] control thread has finished
[2025-06-05 17:31:38] 2025-06-05 21:31:30,652 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 17:31:38] 2025-06-05 21:31:30,666 | INFO     | [job] control thread has finished
[2025-06-05 17:31:38] 2025-06-05 21:31:31,079 | INFO     | [data] copytool_out thread has finished
[2025-06-05 17:31:38] 2025-06-05 21:31:32,277 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 17:31:38] 2025-06-05 21:31:33,364 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140165629073216)>', '<ExcThread(monitor, started 140164848416512)>']
[2025-06-05 17:31:38] 2025-06-05 21:31:34,297 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 17:31:38] 2025-06-05 21:31:34,297 | INFO     | [monitor] control thread has ended
[2025-06-05 17:31:38] 2025-06-05 21:31:38,387 | INFO     | all workflow threads have been joined
[2025-06-05 17:31:38] 2025-06-05 21:31:38,387 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 17:31:38] 2025-06-05 21:31:38,387 | INFO     | traces error code: 0
[2025-06-05 17:31:38] 2025-06-05 21:31:38,388 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 17:31:38] 2025-06-05 21:31:38,472 [wrapper] ==== pilot stdout END ====
[2025-06-05 17:31:38] 2025-06-05 21:31:38,476 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 17:31:38] 2025-06-05 21:31:38,480 [wrapper] pilotpid: 753
[2025-06-05 17:31:38] 2025-06-05 21:31:38,484 [wrapper] Pilot exit status: 0
[2025-06-05 17:31:38] 2025-06-05 21:31:38,500 [wrapper] pandaids: 6668531706
[2025-06-05 17:31:38] 2025-06-05 21:31:38,537 [wrapper] cleanup supervisor_pilot 27547 754
[2025-06-05 17:31:38] 2025-06-05 21:31:38,541 [wrapper] Test setup, not cleaning
[2025-06-05 17:31:38] 2025-06-05 21:31:38,544 [wrapper] apfmon messages muted
[2025-06-05 17:31:38] 2025-06-05 21:31:38,548 [wrapper] ==== wrapper stdout END ====
[2025-06-05 17:31:38] 2025-06-05 21:31:38,551 [wrapper] ==== wrapper stderr END ====
[2025-06-05 17:31:38]  *** Error codes and diagnostics ***
[2025-06-05 17:31:38]     "exeErrorCode": 0,
[2025-06-05 17:31:38]     "exeErrorDiag": "",
[2025-06-05 17:31:38]     "pilotErrorCode": 0,
[2025-06-05 17:31:38]     "pilotErrorDiag": "",
[2025-06-05 17:31:38]  *** Listing of results directory ***
[2025-06-05 17:31:38] total 413772
[2025-06-05 17:31:38] -rw-r--r-- 1 boincer umatlas      5111 May 28 10:07 queuedata.json
[2025-06-05 17:31:38] -rw-r--r-- 1 boincer umatlas    495897 May 28 10:07 pilot3.tar.gz
[2025-06-05 17:31:38] -rwx------ 1 boincer umatlas     37140 May 28 10:07 runpilot2-wrapper.sh
[2025-06-05 17:31:38] -rw-r--r-- 1 boincer umatlas       100 Jun  5 16:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 17:31:38] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 16:02 run_atlas
[2025-06-05 17:31:38] -rw-r--r-- 1 boincer umatlas       105 Jun  5 16:02 job.xml
[2025-06-05 17:31:38] -rw-r--r-- 2 boincer umatlas 224422236 Jun  5 16:02 EVNT.44871834._003332.pool.root.1
[2025-06-05 17:31:38] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 16:02 start_atlas.sh
[2025-06-05 17:31:38] drwxrwx--x 2 boincer umatlas      4096 Jun  5 16:02 shared
[2025-06-05 17:31:38] -rw-r--r-- 2 boincer umatlas    508880 Jun  5 16:02 input.tar.gz
[2025-06-05 17:31:38] -rw-r--r-- 1 boincer umatlas         0 Jun  5 16:02 boinc_lockfile
[2025-06-05 17:31:38] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 16:02 pandaJob.out
[2025-06-05 17:31:38] -rw------- 1 boincer umatlas    987599 Jun  5 16:02 agis_schedconf.cvmfs.json
[2025-06-05 17:31:38] -rw------- 1 boincer umatlas   1598969 Jun  5 16:02 agis_ddmendpoints.agis.ALL.json
[2025-06-05 17:31:38] drwx------ 4 boincer umatlas      4096 Jun  5 16:02 pilot3
[2025-06-05 17:31:38] -rw-r--r-- 1 boincer umatlas      5867 Jun  5 17:29 init_data.xml
[2025-06-05 17:31:38] -rw------- 1 boincer umatlas        95 Jun  5 17:30 pilot_heartbeat.json
[2025-06-05 17:31:38] -rw------- 1 boincer umatlas 193677448 Jun  5 17:30 HITS.44871837._085463.pool.root.1
[2025-06-05 17:31:38] -rw-r--r-- 1 boincer umatlas       529 Jun  5 17:31 boinc_task_state.xml
[2025-06-05 17:31:38] -rw------- 1 boincer umatlas      1047 Jun  5 17:31 memory_monitor_summary.json
[2025-06-05 17:31:38] -rw------- 1 boincer umatlas    384047 Jun  5 17:31 log.44871837._085463.job.log.tgz.1
[2025-06-05 17:31:38] -rw------- 1 boincer umatlas      7749 Jun  5 17:31 heartbeat.json
[2025-06-05 17:31:38] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 17:31 boinc_mmap_file
[2025-06-05 17:31:38] -rw-r--r-- 1 boincer umatlas        27 Jun  5 17:31 wrapper_checkpoint.txt
[2025-06-05 17:31:38] -rw------- 1 boincer umatlas      4476 Jun  5 17:31 pilotlog.txt
[2025-06-05 17:31:38] -rw------- 1 boincer umatlas    500565 Jun  5 17:31 log.44871837._085463.job.log.1
[2025-06-05 17:31:38] -rw------- 1 boincer umatlas       357 Jun  5 17:31 output.list
[2025-06-05 17:31:38] -rw-r--r-- 1 boincer umatlas       620 Jun  5 17:31 runtime_log
[2025-06-05 17:31:38] -rw------- 1 boincer umatlas    901120 Jun  5 17:31 result.tar.gz
[2025-06-05 17:31:38] -rw-r--r-- 1 boincer umatlas      8661 Jun  5 17:31 runtime_log.err
[2025-06-05 17:31:38] -rw------- 1 boincer umatlas       659 Jun  5 17:31 kLMNDmccWe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsIcKDmRZn5Ln.diag
[2025-06-05 17:31:38] -rw-r--r-- 1 boincer umatlas     21291 Jun  5 17:31 stderr.txt
[2025-06-05 17:31:38] HITS file was successfully produced:
[2025-06-05 17:31:38] -rw------- 1 boincer umatlas 193677448 Jun  5 17:30 shared/HITS.pool.root.1
[2025-06-05 17:31:38]  *** Contents of shared directory: ***
[2025-06-05 17:31:38] total 409708
[2025-06-05 17:31:38] -rw-r--r-- 2 boincer umatlas 224422236 Jun  5 16:02 ATLAS.root_0
[2025-06-05 17:31:38] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 16:02 start_atlas.sh
[2025-06-05 17:31:38] -rw-r--r-- 2 boincer umatlas    508880 Jun  5 16:02 input.tar.gz
[2025-06-05 17:31:38] -rw------- 1 boincer umatlas 193677448 Jun  5 17:30 HITS.pool.root.1
[2025-06-05 17:31:38] -rw------- 1 boincer umatlas    901120 Jun  5 17:31 result.tar.gz
17:31:40 (29533): run_atlas exited; CPU time 58345.636926
17:31:40 (29533): called boinc_finish(0)

</stderr_txt>
]]>

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