Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:59:47 (4148379): wrapper (7.7.26015): starting
15:59:47 (4148379): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 15:59:47] Arguments: --nthreads 8
[2025-06-05 15:59:47] Threads: 8
[2025-06-05 15:59:47] Checking for CVMFS
[2025-06-05 15:59:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 15:59:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 15:59:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 15:59:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 15:59:48] 2.12.6.0 6829 3229 217004 146830 3 427 31820851 32935936 16975 16776704 0 25860578 99.900 5304721 35378 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 15:59:48] CVMFS is ok
[2025-06-05 15:59:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 15:59:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 15:59:48] Further information can be found at the LHC@home message board.
[2025-06-05 15:59:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 15:59:48] Checking for apptainer binary...
[2025-06-05 15:59:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 15:59:48] Running /usr/bin/apptainer --version
[2025-06-05 15:59:48] apptainer version 1.4.1-1.el9
[2025-06-05 15:59:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 15:59:48] c6-8-25-3.aglt2.org
[2025-06-05 15:59:48] apptainer works
[2025-06-05 15:59:48] Set ATHENA_PROC_NUMBER=8
[2025-06-05 15:59:48] Set ATHENA_CORE_NUMBER=8
[2025-06-05 15:59:48] Starting ATLAS job with PandaID=6677391543
[2025-06-05 15:59:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 17:29:24]  *** The last 200 lines of the pilot log: ***
[2025-06-05 17:29:24]  guid=021af99d-51dc-4249-b092-98e9f355deb1
[2025-06-05 17:29:24]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 17:29:24]  is_altstaged=None
[2025-06-05 17:29:24]  is_tar=False
[2025-06-05 17:29:24]  lfn=log.45006595._007227.job.log.tgz.1
[2025-06-05 17:29:24]  mtime=0
[2025-06-05 17:29:24]  protocol_id=None
[2025-06-05 17:29:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 17:29:24]  replicas=None
[2025-06-05 17:29:24]  scope=mc23_13p6TeV
[2025-06-05 17:29:24]  status=None
[2025-06-05 17:29:24]  status_code=0
[2025-06-05 17:29:24]  storage_token=
[2025-06-05 17:29:24]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6677391543/log.45006595._007227.job.log.tgz.1
[2025-06-05 17:29:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/1c/log.45006595._007227.job.log.tgz.1
[2025-06-05 17:29:24]  workdir=None
[2025-06-05 17:29:24] ]
[2025-06-05 17:29:24] 2025-06-05 21:28:57,744 | INFO     | transferring file log.45006595._007227.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6677391543/log.45006595._007227.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 17:29:24] 2025-06-05 21:28:57,745 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6677391543/log.45006595._007227.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._007227.job
[2025-06-05 17:29:24] 2025-06-05 21:28:57,761 | INFO     | adding to output.list: log.45006595._007227.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/1c/log.45006595._007227.job.log.tg
[2025-06-05 17:29:24] 2025-06-05 21:28:57,762 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 17:29:24] 2025-06-05 21:28:57,762 | INFO     | summary of transferred files:
[2025-06-05 17:29:24] 2025-06-05 21:28:57,762 | INFO     |  -- lfn=log.45006595._007227.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 17:29:24] 2025-06-05 21:28:57,762 | INFO     | stage-out finished correctly
[2025-06-05 17:29:24] 2025-06-05 21:28:58,191 | INFO     | monitor loop #376: job 0:6677391543 is in state 'finished'
[2025-06-05 17:29:24] 2025-06-05 21:28:58,191 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:29:24] 2025-06-05 21:29:00,222 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 17:29:24] 2025-06-05 21:29:00,317 | INFO     | job 6677391543 has state=finished
[2025-06-05 17:29:24] 2025-06-05 21:29:00,317 | INFO     | preparing for final server update for job 6677391543 in state='finished'
[2025-06-05 17:29:24] 2025-06-05 21:29:00,317 | INFO     | this job has now completed (state=finished)
[2025-06-05 17:29:24] 2025-06-05 21:29:00,318 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 17:29:24] 2025-06-05 21:29:00,318 | INFO     | log transfer has been attempted: DONE
[2025-06-05 17:29:24] 2025-06-05 21:29:00,318 | INFO     | job 6677391543 has finished - writing final server update
[2025-06-05 17:29:24] 2025-06-05 21:29:00,318 | INFO     | total number of processed events: 400 (read)
[2025-06-05 17:29:24] 2025-06-05 21:29:00,335 | INFO     | executing command: lscpu
[2025-06-05 17:29:24] 2025-06-05 21:29:00,405 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 17:29:24] 2025-06-05 21:29:00,703 | INFO     | monitor loop #377: job 0:6677391543 is in state 'finished'
[2025-06-05 17:29:24] 2025-06-05 21:29:00,703 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:29:24] 2025-06-05 21:29:03,206 | INFO     | monitor loop #378: job 0:6677391543 is in state 'finished'
[2025-06-05 17:29:24] 2025-06-05 21:29:03,207 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:29:24] 2025-06-05 21:29:03,669 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 17:29:24] 2025-06-05 21:29:03,669 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677391543/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 17:29:24] 2025-06-05 21:29:03,670 | INFO     | extracted standard info from prmon json
[2025-06-05 17:29:24] 2025-06-05 21:29:03,670 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 17:29:24] 2025-06-05 21:29:03,670 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 17:29:24] 2025-06-05 21:29:03,670 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 17:29:24] 2025-06-05 21:29:03,670 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 17:29:24] 2025-06-05 21:29:03,672 | INFO     | fitting pss+swap vs Time
[2025-06-05 17:29:24] 2025-06-05 21:29:03,673 | INFO     | sum of square deviations: 158733163.98750016
[2025-06-05 17:29:24] 2025-06-05 21:29:03,673 | INFO     | sum of deviations: -1260638146.6625006
[2025-06-05 17:29:24] 2025-06-05 21:29:03,673 | INFO     | mean x: 1749156339.5125
[2025-06-05 17:29:24] 2025-06-05 21:29:03,673 | INFO     | mean y: 2211016.1625
[2025-06-05 17:29:24] 2025-06-05 21:29:03,673 | INFO     | -- intersect: 13893783203.55772
[2025-06-05 17:29:24] 2025-06-05 21:29:03,674 | INFO     | intersect: 13893783203.55772
[2025-06-05 17:29:24] 2025-06-05 21:29:03,674 | INFO     | chi2: 0.0230390528748436
[2025-06-05 17:29:24] 2025-06-05 21:29:03,674 | INFO     | -- intersect: 13893783203.55772
[2025-06-05 17:29:24] 2025-06-05 21:29:03,674 | INFO     | current memory leak: -7.94 B/s (using 80 data points, chi2=0.02)
[2025-06-05 17:29:24] 2025-06-05 21:29:03,674 | INFO     | ..............................
[2025-06-05 17:29:24] 2025-06-05 21:29:03,674 | INFO     | . Timing measurements:
[2025-06-05 17:29:24] 2025-06-05 21:29:03,674 | INFO     | . get job = 0 s
[2025-06-05 17:29:24] 2025-06-05 21:29:03,675 | INFO     | . initial setup = 2 s
[2025-06-05 17:29:24] 2025-06-05 21:29:03,675 | INFO     | . payload setup = 6 s
[2025-06-05 17:29:24] 2025-06-05 21:29:03,675 | INFO     | . stage-in = 0 s
[2025-06-05 17:29:24] 2025-06-05 21:29:03,675 | INFO     | . payload execution = 5311 s
[2025-06-05 17:29:24] 2025-06-05 21:29:03,675 | INFO     | . stage-out = 0 s
[2025-06-05 17:29:24] 2025-06-05 21:29:03,675 | INFO     | . log creation = 0 s
[2025-06-05 17:29:24] 2025-06-05 21:29:03,675 | INFO     | ..............................
[2025-06-05 17:29:24] 2025-06-05 21:29:03,874 | INFO     | 
[2025-06-05 17:29:24] 2025-06-05 21:29:03,875 | INFO     | job summary report
[2025-06-05 17:29:24] 2025-06-05 21:29:03,875 | INFO     | --------------------------------------------------
[2025-06-05 17:29:24] 2025-06-05 21:29:03,875 | INFO     | PanDA job id: 6677391543
[2025-06-05 17:29:24] 2025-06-05 21:29:03,875 | INFO     | task id: 45006595
[2025-06-05 17:29:24] 2025-06-05 21:29:03,875 | INFO     | errors: (none)
[2025-06-05 17:29:24] 2025-06-05 21:29:03,875 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 17:29:24] 2025-06-05 21:29:03,875 | INFO     | pilot state: finished 
[2025-06-05 17:29:24] 2025-06-05 21:29:03,875 | INFO     | transexitcode: 0
[2025-06-05 17:29:24] 2025-06-05 21:29:03,875 | INFO     | exeerrorcode: 0
[2025-06-05 17:29:24] 2025-06-05 21:29:03,875 | INFO     | exeerrordiag: 
[2025-06-05 17:29:24] 2025-06-05 21:29:03,875 | INFO     | exitcode: 0
[2025-06-05 17:29:24] 2025-06-05 21:29:03,875 | INFO     | exitmsg: OK
[2025-06-05 17:29:24] 2025-06-05 21:29:03,876 | INFO     | cpuconsumptiontime: 36377 s
[2025-06-05 17:29:24] 2025-06-05 21:29:03,876 | INFO     | nevents: 400
[2025-06-05 17:29:24] 2025-06-05 21:29:03,876 | INFO     | neventsw: 0
[2025-06-05 17:29:24] 2025-06-05 21:29:03,876 | INFO     | pid: 4169459
[2025-06-05 17:29:24] 2025-06-05 21:29:03,876 | INFO     | pgrp: 4169459
[2025-06-05 17:29:24] 2025-06-05 21:29:03,876 | INFO     | corecount: 8
[2025-06-05 17:29:24] 2025-06-05 21:29:03,876 | INFO     | event service: False
[2025-06-05 17:29:24] 2025-06-05 21:29:03,876 | INFO     | sizes: {0: 2397221, 1: 2397363, 5: 2397569, 11: 2397625, 5322: 2424170, 5324: 2433111, 5326: 2433295, 5330: 2433465}
[2025-06-05 17:29:24] 2025-06-05 21:29:03,876 | INFO     | --------------------------------------------------
[2025-06-05 17:29:24] 2025-06-05 21:29:03,876 | INFO     | 
[2025-06-05 17:29:24] 2025-06-05 21:29:03,876 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-05 17:29:24] 2025-06-05 21:29:03,896 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 17:29:24] 2025-06-05 21:29:03,896 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 17:29:24] 2025-06-05 21:29:03,896 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 17:29:24] 2025-06-05 21:29:03,896 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 17:29:24] 2025-06-05 21:29:03,896 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 17:29:24] 2025-06-05 21:29:03,896 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 17:29:24] 2025-06-05 21:29:03,897 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 17:29:24] 2025-06-05 21:29:03,897 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 17:29:24] 2025-06-05 21:29:03,897 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 17:29:24] 2025-06-05 21:29:03,897 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 17:29:24] 2025-06-05 21:29:03,897 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 17:29:24] 2025-06-05 21:29:03,897 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 17:29:24] 2025-06-05 21:29:03,897 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 17:29:24] 2025-06-05 21:29:03,897 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 17:29:24] 2025-06-05 21:29:03,897 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 17:29:24] 2025-06-05 21:29:03,897 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 17:29:24] 2025-06-05 21:29:03,897 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 17:29:24] 2025-06-05 21:29:03,898 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 17:29:24] 2025-06-05 21:29:03,898 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 17:29:24] 2025-06-05 21:29:03,898 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 17:29:24] 2025-06-05 21:29:03,898 | INFO     | job 6677391543 has completed (purged errors)
[2025-06-05 17:29:24] 2025-06-05 21:29:03,898 | INFO     | overall cleanup function is called
[2025-06-05 17:29:24] 2025-06-05 21:29:04,906 | INFO     | --- collectZombieJob: --- 10, [4169459]
[2025-06-05 17:29:24] 2025-06-05 21:29:04,907 | INFO     | zombie collector waiting for pid 4169459
[2025-06-05 17:29:24] 2025-06-05 21:29:04,907 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 17:29:24] 2025-06-05 21:29:04,907 | INFO     | collected zombie processes
[2025-06-05 17:29:24] 2025-06-05 21:29:04,907 | INFO     | will attempt to kill all subprocesses of pid=4169459
[2025-06-05 17:29:24] 2025-06-05 21:29:05,273 | INFO     | process IDs to be killed: [4169459] (in reverse order)
[2025-06-05 17:29:24] 2025-06-05 21:29:05,380 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 17:29:24] 2025-06-05 21:29:05,381 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 17:29:24] 2025-06-05 21:29:05,398 | INFO     | did not find any defunct processes belonging to 4169459
[2025-06-05 17:29:24] 2025-06-05 21:29:05,417 | INFO     | did not find any defunct processes belonging to 4169459
[2025-06-05 17:29:24] 2025-06-05 21:29:05,418 | INFO     | ready for new job
[2025-06-05 17:29:24] 2025-06-05 21:29:05,418 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 17:29:24] 2025-06-05 21:29:05,420 | INFO     | **************************************
[2025-06-05 17:29:24] 2025-06-05 21:29:05,420 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 17:29:24] 2025-06-05 21:29:05,420 | INFO     | **************************************
[2025-06-05 17:29:24] 2025-06-05 21:29:05,420 | INFO     | 
[2025-06-05 17:29:24] 2025-06-05 21:29:05,425 | INFO     | architecture information:
[2025-06-05 17:29:24] 2025-06-05 21:29:05,426 | INFO     | executing command: cat /etc/os-release
[2025-06-05 17:29:24] 2025-06-05 21:29:05,443 | INFO     | cat /etc/os-release:
[2025-06-05 17:29:24] NAME="CentOS Linux"
[2025-06-05 17:29:24] VERSION="7 (Core)"
[2025-06-05 17:29:24] ID="centos"
[2025-06-05 17:29:24] ID_LIKE="rhel fedora"
[2025-06-05 17:29:24] VERSION_ID="7"
[2025-06-05 17:29:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 17:29:24] ANSI_COLOR="0;31"
[2025-06-05 17:29:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 17:29:24] HOME_URL="https://www.centos.org/"
[2025-06-05 17:29:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 17:29:24] 
[2025-06-05 17:29:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 17:29:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 17:29:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 17:29:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 17:29:24] 
[2025-06-05 17:29:24] 2025-06-05 21:29:05,443 | INFO     | **************************************
[2025-06-05 17:29:24] 2025-06-05 21:29:05,946 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-05 17:29:24] 2025-06-05 21:29:05,962 | INFO     | sufficient remaining disk space (75402051584 B)
[2025-06-05 17:29:24] 2025-06-05 21:29:05,963 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 17:29:24] 2025-06-05 21:29:05,963 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 17:29:24] 2025-06-05 21:29:05,963 | INFO     | update_server=False
[2025-06-05 17:29:24] 2025-06-05 21:29:05,963 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 17:29:24] 2025-06-05 21:29:05,964 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 17:29:24] 2025-06-05 21:29:06,136 | INFO     | all job control threads have been joined
[2025-06-05 17:29:24] 2025-06-05 21:29:06,232 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 17:29:24] 2025-06-05 21:29:06,232 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 17:29:24] 2025-06-05 21:29:06,232 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 17:29:24] 2025-06-05 21:29:06,321 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 17:29:24] 2025-06-05 21:29:06,419 | INFO     | all payload control threads have been joined
[2025-06-05 17:29:24] 2025-06-05 21:29:06,713 | INFO     | all data control threads have been joined
[2025-06-05 17:29:24] 2025-06-05 21:29:06,715 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:29:24] 2025-06-05 21:29:06,716 | INFO     | aborting loop
[2025-06-05 17:29:24] 2025-06-05 21:29:06,969 | INFO     | [job] retrieve thread has finished
[2025-06-05 17:29:24] 2025-06-05 21:29:07,142 | INFO     | [job] control thread has finished
[2025-06-05 17:29:24] 2025-06-05 21:29:07,232 | INFO     | [payload] failed_post thread has finished
[2025-06-05 17:29:24] 2025-06-05 21:29:07,425 | INFO     | [payload] control thread has finished
[2025-06-05 17:29:24] 2025-06-05 21:29:07,471 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 17:29:24] 2025-06-05 21:29:07,481 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 17:29:24] 2025-06-05 21:29:07,597 | INFO     | [job] validate thread has finished
[2025-06-05 17:29:24] 2025-06-05 21:29:07,628 | INFO     | [data] copytool_in thread has finished
[2025-06-05 17:29:24] 2025-06-05 21:29:07,718 | INFO     | [data] control thread has finished
[2025-06-05 17:29:24] 2025-06-05 21:29:07,720 | INFO     | [job] job monitor thread has finished
[2025-06-05 17:29:24] 2025-06-05 21:29:07,792 | INFO     | [payload] validate_post thread has finished
[2025-06-05 17:29:24] 2025-06-05 21:29:07,968 | INFO     | [data] copytool_out thread has finished
[2025-06-05 17:29:24] 2025-06-05 21:29:08,439 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 17:29:24] 2025-06-05 21:29:08,778 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:29:24] 2025-06-05 21:29:09,783 | INFO     | [job] queue monitor thread has finished
[2025-06-05 17:29:24] 2025-06-05 21:29:10,326 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 17:29:24] 2025-06-05 21:29:16,457 | INFO     | job.realtimelogging is not enabled
[2025-06-05 17:29:24] 2025-06-05 21:29:17,462 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 17:29:24] 2025-06-05 21:29:19,000 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140609988663104)>', '<ExcThread(monitor, started 140609327175424)>']
[2025-06-05 17:29:24] 2025-06-05 21:29:19,297 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 17:29:24] 2025-06-05 21:29:19,297 | INFO     | [monitor] control thread has ended
[2025-06-05 17:29:24] 2025-06-05 21:29:24,025 | INFO     | all workflow threads have been joined
[2025-06-05 17:29:24] 2025-06-05 21:29:24,026 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 17:29:24] 2025-06-05 21:29:24,026 | INFO     | traces error code: 0
[2025-06-05 17:29:24] 2025-06-05 21:29:24,026 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 17:29:24] 2025-06-05 21:29:24,173 [wrapper] ==== pilot stdout END ====
[2025-06-05 17:29:24] 2025-06-05 21:29:24,177 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 17:29:24] 2025-06-05 21:29:24,181 [wrapper] pilotpid: 4153386
[2025-06-05 17:29:24] 2025-06-05 21:29:24,184 [wrapper] Pilot exit status: 0
[2025-06-05 17:29:24] 2025-06-05 21:29:24,194 [wrapper] pandaids: 6677391543
[2025-06-05 17:29:24] 2025-06-05 21:29:24,257 [wrapper] cleanup supervisor_pilot  169703 4153387
[2025-06-05 17:29:24] 2025-06-05 21:29:24,260 [wrapper] Test setup, not cleaning
[2025-06-05 17:29:24] 2025-06-05 21:29:24,263 [wrapper] apfmon messages muted
[2025-06-05 17:29:24] 2025-06-05 21:29:24,265 [wrapper] ==== wrapper stdout END ====
[2025-06-05 17:29:24] 2025-06-05 21:29:24,267 [wrapper] ==== wrapper stderr END ====
[2025-06-05 17:29:24]  *** Error codes and diagnostics ***
[2025-06-05 17:29:24]     "exeErrorCode": 0,
[2025-06-05 17:29:24]     "exeErrorDiag": "",
[2025-06-05 17:29:24]     "pilotErrorCode": 0,
[2025-06-05 17:29:24]     "pilotErrorDiag": "",
[2025-06-05 17:29:24]  *** Listing of results directory ***
[2025-06-05 17:29:24] total 389536
[2025-06-05 17:29:24] -rw-r--r--. 1 boincer umatlas    495897 Jun  2 14:02 pilot3.tar.gz
[2025-06-05 17:29:24] -rw-r--r--. 1 boincer umatlas      5111 Jun  2 14:21 queuedata.json
[2025-06-05 17:29:24] -rwx------. 1 boincer umatlas     37140 Jun  2 14:22 runpilot2-wrapper.sh
[2025-06-05 17:29:24] -rw-r--r--. 1 boincer umatlas       100 Jun  5 15:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 17:29:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 15:59 run_atlas
[2025-06-05 17:29:24] -rw-r--r--. 1 boincer umatlas       105 Jun  5 15:59 job.xml
[2025-06-05 17:29:24] -rw-r--r--. 2 boincer umatlas 213898701 Jun  5 15:59 EVNT.45006593._000289.pool.root.1
[2025-06-05 17:29:24] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 15:59 start_atlas.sh
[2025-06-05 17:29:24] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 15:59 shared
[2025-06-05 17:29:24] -rw-r--r--. 2 boincer umatlas    508878 Jun  5 15:59 input.tar.gz
[2025-06-05 17:29:24] -rw-r--r--. 1 boincer umatlas         0 Jun  5 15:59 boinc_lockfile
[2025-06-05 17:29:24] -rw-r--r--. 1 boincer umatlas      2521 Jun  5 15:59 pandaJob.out
[2025-06-05 17:29:24] -rw-------. 1 boincer umatlas    987599 Jun  5 15:59 agis_schedconf.cvmfs.json
[2025-06-05 17:29:24] -rw-------. 1 boincer umatlas   1598969 Jun  5 15:59 agis_ddmendpoints.agis.ALL.json
[2025-06-05 17:29:24] drwx------. 4 boincer umatlas      4096 Jun  5 15:59 pilot3
[2025-06-05 17:29:24] -rw-r--r--. 1 boincer umatlas      6855 Jun  5 17:28 init_data.xml
[2025-06-05 17:29:24] -rw-------. 1 boincer umatlas 179467907 Jun  5 17:28 HITS.45006595._007227.pool.root.1
[2025-06-05 17:29:24] -rw-r--r--. 1 boincer umatlas       529 Jun  5 17:28 boinc_task_state.xml
[2025-06-05 17:29:24] -rw-------. 1 boincer umatlas        95 Jun  5 17:28 pilot_heartbeat.json
[2025-06-05 17:29:24] -rw-------. 1 boincer umatlas      1040 Jun  5 17:28 memory_monitor_summary.json
[2025-06-05 17:29:24] -rw-------. 1 boincer umatlas    327979 Jun  5 17:28 log.45006595._007227.job.log.tgz.1
[2025-06-05 17:29:24] -rw-------. 1 boincer umatlas      7716 Jun  5 17:29 heartbeat.json
[2025-06-05 17:29:24] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 17:29 boinc_mmap_file
[2025-06-05 17:29:24] -rw-r--r--. 1 boincer umatlas        27 Jun  5 17:29 wrapper_checkpoint.txt
[2025-06-05 17:29:24] -rw-------. 1 boincer umatlas      4425 Jun  5 17:29 pilotlog.txt
[2025-06-05 17:29:24] -rw-------. 1 boincer umatlas    509010 Jun  5 17:29 log.45006595._007227.job.log.1
[2025-06-05 17:29:24] -rw-------. 1 boincer umatlas       357 Jun  5 17:29 output.list
[2025-06-05 17:29:24] -rw-r--r--. 1 boincer umatlas       620 Jun  5 17:29 runtime_log
[2025-06-05 17:29:24] -rw-------. 1 boincer umatlas    860160 Jun  5 17:29 result.tar.gz
[2025-06-05 17:29:24] -rw-------. 1 boincer umatlas       653 Jun  5 17:29 xoXLDmcyOg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmfAWKDm0esnan.diag
[2025-06-05 17:29:24] -rw-r--r--. 1 boincer umatlas      8664 Jun  5 17:29 runtime_log.err
[2025-06-05 17:29:24] -rw-r--r--. 1 boincer umatlas     21297 Jun  5 17:29 stderr.txt
[2025-06-05 17:29:24] HITS file was successfully produced:
[2025-06-05 17:29:24] -rw-------. 1 boincer umatlas 179467907 Jun  5 17:28 shared/HITS.pool.root.1
[2025-06-05 17:29:24]  *** Contents of shared directory: ***
[2025-06-05 17:29:24] total 385516
[2025-06-05 17:29:24] -rw-r--r--. 2 boincer umatlas 213898701 Jun  5 15:59 ATLAS.root_0
[2025-06-05 17:29:24] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 15:59 start_atlas.sh
[2025-06-05 17:29:24] -rw-r--r--. 2 boincer umatlas    508878 Jun  5 15:59 input.tar.gz
[2025-06-05 17:29:24] -rw-------. 1 boincer umatlas 179467907 Jun  5 17:28 HITS.pool.root.1
[2025-06-05 17:29:24] -rw-------. 1 boincer umatlas    860160 Jun  5 17:29 result.tar.gz
17:29:26 (4148379): run_atlas exited; CPU time 36582.820467
17:29:26 (4148379): called boinc_finish(0)

</stderr_txt>
]]>

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