Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:53:51 (3550749): wrapper (7.7.26015): starting
15:53:51 (3550749): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 15:53:51] Arguments: --nthreads 8
[2025-06-05 15:53:51] Threads: 8
[2025-06-05 15:53:51] Checking for CVMFS
[2025-06-05 15:53:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 15:53:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 15:53:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 15:53:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 15:53:51] 2.12.6.0 2312179 25146 395464 146830 1 598 28182248 32935936 16067 16776704 1 126629979 99.724 89657999 21162 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 15:53:51] CVMFS is ok
[2025-06-05 15:53:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 15:53:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 15:53:51] Further information can be found at the LHC@home message board.
[2025-06-05 15:53:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 15:53:51] Checking for apptainer binary...
[2025-06-05 15:53:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 15:53:51] Running /usr/bin/apptainer --version
[2025-06-05 15:53:51] apptainer version 1.4.1-1.el9
[2025-06-05 15:53:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 15:53:51] c6-2-11-1.aglt2.org
[2025-06-05 15:53:51] apptainer works
[2025-06-05 15:53:51] Set ATHENA_PROC_NUMBER=8
[2025-06-05 15:53:51] Set ATHENA_CORE_NUMBER=8
[2025-06-05 15:53:51] Starting ATLAS job with PandaID=6668532241
[2025-06-05 15:53:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 17:42:57]  *** The last 200 lines of the pilot log: ***
[2025-06-05 17:42:57] 2025-06-05 21:42:45,752 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 17:42:57] 2025-06-05 21:42:45,752 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668532241/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 17:42:57] 2025-06-05 21:42:45,752 | INFO     | extracted standard info from prmon json
[2025-06-05 17:42:57] 2025-06-05 21:42:45,752 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 17:42:57] 2025-06-05 21:42:45,752 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 17:42:57] 2025-06-05 21:42:45,753 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 17:42:57] 2025-06-05 21:42:45,753 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 17:42:57] 2025-06-05 21:42:45,754 | INFO     | fitting pss+swap vs Time
[2025-06-05 17:42:57] 2025-06-05 21:42:45,754 | INFO     | sum of square deviations: 379832238.0
[2025-06-05 17:42:57] 2025-06-05 21:42:45,754 | INFO     | sum of deviations: -3937964068.000002
[2025-06-05 17:42:57] 2025-06-05 21:42:45,754 | INFO     | mean x: 1749156502.0
[2025-06-05 17:42:57] 2025-06-05 21:42:45,754 | INFO     | mean y: 2213073.7009345796
[2025-06-05 17:42:57] 2025-06-05 21:42:45,754 | INFO     | -- intersect: 18136838745.428604
[2025-06-05 17:42:57] 2025-06-05 21:42:45,755 | INFO     | intersect: 18136838745.428604
[2025-06-05 17:42:57] 2025-06-05 21:42:45,755 | INFO     | chi2: 2.3254884426829623
[2025-06-05 17:42:57] 2025-06-05 21:42:45,755 | INFO     | sum of square deviations: 329031285.5
[2025-06-05 17:42:57] 2025-06-05 21:42:45,755 | INFO     | sum of deviations: 3011354243.000002
[2025-06-05 17:42:57] 2025-06-05 21:42:45,755 | INFO     | mean x: 1749156349.5
[2025-06-05 17:42:57] 2025-06-05 21:42:45,755 | INFO     | mean y: 2233270.725490196
[2025-06-05 17:42:57] 2025-06-05 21:42:45,755 | INFO     | -- intersect: -16006364169.280619
[2025-06-05 17:42:57] 2025-06-05 21:42:45,755 | INFO     | intersect: -16006364169.280619
[2025-06-05 17:42:57] 2025-06-05 21:42:45,755 | INFO     | chi2: 1.6833146229897646
[2025-06-05 17:42:57] 2025-06-05 21:42:45,755 | INFO     | current chi2=1.6833146229897646 (change=27.614577991723277 %)
[2025-06-05 17:42:57] 2025-06-05 21:42:45,756 | INFO     | sum of square deviations: 282974608.0
[2025-06-05 17:42:57] 2025-06-05 21:42:45,756 | INFO     | sum of deviations: 2799604698.9999986
[2025-06-05 17:42:57] 2025-06-05 21:42:45,756 | INFO     | mean x: 1749156197.0
[2025-06-05 17:42:57] 2025-06-05 21:42:45,756 | INFO     | mean y: 2232562.93814433
[2025-06-05 17:42:57] 2025-06-05 21:42:45,756 | INFO     | -- intersect: -17303015929.20277
[2025-06-05 17:42:57] 2025-06-05 21:42:45,756 | INFO     | intersect: -17303015929.20277
[2025-06-05 17:42:57] 2025-06-05 21:42:45,756 | INFO     | chi2: 1.6848147939545541
[2025-06-05 17:42:57] 2025-06-05 21:42:45,756 | INFO     | current chi2=1.6848147939545541 (change=-0.08912005778961353 %)
[2025-06-05 17:42:57] 2025-06-05 21:42:45,756 | INFO     | right removable region: 96
[2025-06-05 17:42:57] 2025-06-05 21:42:45,756 | INFO     | sum of square deviations: 329031285.5
[2025-06-05 17:42:57] 2025-06-05 21:42:45,757 | INFO     | sum of deviations: -17687434278.999996
[2025-06-05 17:42:57] 2025-06-05 21:42:45,757 | INFO     | mean x: 1749156654.5
[2025-06-05 17:42:57] 2025-06-05 21:42:45,757 | INFO     | mean y: 2253514.2156862747
[2025-06-05 17:42:57] 2025-06-05 21:42:45,757 | INFO     | -- intersect: 94030070118.73808
[2025-06-05 17:42:57] 2025-06-05 21:42:45,757 | INFO     | intersect: 94030070118.73808
[2025-06-05 17:42:57] 2025-06-05 21:42:45,757 | INFO     | chi2: 0.9243752304423389
[2025-06-05 17:42:57] 2025-06-05 21:42:45,757 | INFO     | current chi2=0.9243752304423389 (change=60.25027630858192 %)
[2025-06-05 17:42:57] 2025-06-05 21:42:45,757 | INFO     | sum of square deviations: 282974608.0
[2025-06-05 17:42:57] 2025-06-05 21:42:45,757 | INFO     | sum of deviations: -15015254615.0
[2025-06-05 17:42:57] 2025-06-05 21:42:45,757 | INFO     | mean x: 1749156807.0
[2025-06-05 17:42:57] 2025-06-05 21:42:45,757 | INFO     | mean y: 2244428.525773196
[2025-06-05 17:42:57] 2025-06-05 21:42:45,757 | INFO     | -- intersect: 92816348861.05286
[2025-06-05 17:42:57] 2025-06-05 21:42:45,757 | INFO     | intersect: 92816348861.05286
[2025-06-05 17:42:57] 2025-06-05 21:42:45,757 | INFO     | chi2: 0.8877568729832852
[2025-06-05 17:42:57] 2025-06-05 21:42:45,758 | INFO     | current chi2=0.8877568729832852 (change=3.961416993132847 %)
[2025-06-05 17:42:57] 2025-06-05 21:42:45,758 | INFO     | left removable region: 20
[2025-06-05 17:42:57] 2025-06-05 21:42:45,758 | INFO     | sum of square deviations: 136095575.0
[2025-06-05 17:42:57] 2025-06-05 21:42:45,758 | INFO     | sum of deviations: 446061249.49999994
[2025-06-05 17:42:57] 2025-06-05 21:42:45,758 | INFO     | mean x: 1749156776.5
[2025-06-05 17:42:57] 2025-06-05 21:42:45,758 | INFO     | mean y: 2228023.8552631577
[2025-06-05 17:42:57] 2025-06-05 21:42:45,758 | INFO     | -- intersect: -5730736161.769304
[2025-06-05 17:42:57] 2025-06-05 21:42:45,758 | INFO     | intersect: -5730736161.769304
[2025-06-05 17:42:57] 2025-06-05 21:42:45,758 | INFO     | chi2: 0.04995880872072908
[2025-06-05 17:42:57] 2025-06-05 21:42:45,758 | INFO     | -- intersect: -5730736161.769304
[2025-06-05 17:42:57] 2025-06-05 21:42:45,758 | INFO     | current memory leak: 3.28 B/s (using 76 data points, chi2=0.05)
[2025-06-05 17:42:57] 2025-06-05 21:42:45,759 | INFO     | ..............................
[2025-06-05 17:42:57] 2025-06-05 21:42:45,759 | INFO     | . Timing measurements:
[2025-06-05 17:42:57] 2025-06-05 21:42:45,759 | INFO     | . get job = 0 s
[2025-06-05 17:42:57] 2025-06-05 21:42:45,759 | INFO     | . initial setup = 2 s
[2025-06-05 17:42:57] 2025-06-05 21:42:45,759 | INFO     | . payload setup = 6 s
[2025-06-05 17:42:57] 2025-06-05 21:42:45,759 | INFO     | . stage-in = 0 s
[2025-06-05 17:42:57] 2025-06-05 21:42:45,759 | INFO     | . payload execution = 6489 s
[2025-06-05 17:42:57] 2025-06-05 21:42:45,759 | INFO     | . stage-out = 0 s
[2025-06-05 17:42:57] 2025-06-05 21:42:45,759 | INFO     | . log creation = 0 s
[2025-06-05 17:42:57] 2025-06-05 21:42:45,759 | INFO     | ..............................
[2025-06-05 17:42:57] 2025-06-05 21:42:45,813 | INFO     | 
[2025-06-05 17:42:57] 2025-06-05 21:42:45,814 | INFO     | job summary report
[2025-06-05 17:42:57] 2025-06-05 21:42:45,814 | INFO     | --------------------------------------------------
[2025-06-05 17:42:57] 2025-06-05 21:42:45,814 | INFO     | PanDA job id: 6668532241
[2025-06-05 17:42:57] 2025-06-05 21:42:45,814 | INFO     | task id: 44871837
[2025-06-05 17:42:57] 2025-06-05 21:42:45,814 | INFO     | errors: (none)
[2025-06-05 17:42:57] 2025-06-05 21:42:45,814 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 17:42:57] 2025-06-05 21:42:45,814 | INFO     | pilot state: finished 
[2025-06-05 17:42:57] 2025-06-05 21:42:45,814 | INFO     | transexitcode: 0
[2025-06-05 17:42:57] 2025-06-05 21:42:45,814 | INFO     | exeerrorcode: 0
[2025-06-05 17:42:57] 2025-06-05 21:42:45,814 | INFO     | exeerrordiag: 
[2025-06-05 17:42:57] 2025-06-05 21:42:45,814 | INFO     | exitcode: 0
[2025-06-05 17:42:57] 2025-06-05 21:42:45,814 | INFO     | exitmsg: OK
[2025-06-05 17:42:57] 2025-06-05 21:42:45,815 | INFO     | cpuconsumptiontime: 47804 s
[2025-06-05 17:42:57] 2025-06-05 21:42:45,815 | INFO     | nevents: 400
[2025-06-05 17:42:57] 2025-06-05 21:42:45,815 | INFO     | neventsw: 0
[2025-06-05 17:42:57] 2025-06-05 21:42:45,815 | INFO     | pid: 3562823
[2025-06-05 17:42:57] 2025-06-05 21:42:45,815 | INFO     | pgrp: 3562823
[2025-06-05 17:42:57] 2025-06-05 21:42:45,815 | INFO     | corecount: 8
[2025-06-05 17:42:57] 2025-06-05 21:42:45,815 | INFO     | event service: False
[2025-06-05 17:42:57] 2025-06-05 21:42:45,815 | INFO     | sizes: {0: 2397391, 1: 2397391, 5: 2397625, 11: 2397681, 6500: 2424502, 6501: 2424501, 6502: 2433626, 6504: 2433682, 6508: 2433852}
[2025-06-05 17:42:57] 2025-06-05 21:42:45,815 | INFO     | --------------------------------------------------
[2025-06-05 17:42:57] 2025-06-05 21:42:45,815 | INFO     | 
[2025-06-05 17:42:57] 2025-06-05 21:42:45,815 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 17:42:57] 2025-06-05 21:42:45,829 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 17:42:57] 2025-06-05 21:42:45,829 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 17:42:57] 2025-06-05 21:42:45,829 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 17:42:57] 2025-06-05 21:42:45,829 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 17:42:57] 2025-06-05 21:42:45,829 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 17:42:57] 2025-06-05 21:42:45,829 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 17:42:57] 2025-06-05 21:42:45,829 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 17:42:57] 2025-06-05 21:42:45,829 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 17:42:57] 2025-06-05 21:42:45,829 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 17:42:57] 2025-06-05 21:42:45,829 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 17:42:57] 2025-06-05 21:42:45,829 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 17:42:57] 2025-06-05 21:42:45,829 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 17:42:57] 2025-06-05 21:42:45,830 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 17:42:57] 2025-06-05 21:42:45,830 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 17:42:57] 2025-06-05 21:42:45,830 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 17:42:57] 2025-06-05 21:42:45,830 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 17:42:57] 2025-06-05 21:42:45,830 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 17:42:57] 2025-06-05 21:42:45,830 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 17:42:57] 2025-06-05 21:42:45,830 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 17:42:57] 2025-06-05 21:42:45,830 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 17:42:57] 2025-06-05 21:42:45,830 | INFO     | job 6668532241 has completed (purged errors)
[2025-06-05 17:42:57] 2025-06-05 21:42:45,830 | INFO     | overall cleanup function is called
[2025-06-05 17:42:57] 2025-06-05 21:42:46,837 | INFO     | --- collectZombieJob: --- 10, [3562823]
[2025-06-05 17:42:57] 2025-06-05 21:42:46,838 | INFO     | zombie collector waiting for pid 3562823
[2025-06-05 17:42:57] 2025-06-05 21:42:46,838 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 17:42:57] 2025-06-05 21:42:46,838 | INFO     | collected zombie processes
[2025-06-05 17:42:57] 2025-06-05 21:42:46,838 | INFO     | will attempt to kill all subprocesses of pid=3562823
[2025-06-05 17:42:57] 2025-06-05 21:42:47,056 | INFO     | process IDs to be killed: [3562823] (in reverse order)
[2025-06-05 17:42:57] 2025-06-05 21:42:47,143 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 17:42:57] 2025-06-05 21:42:47,143 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 17:42:57] 2025-06-05 21:42:47,155 | INFO     | did not find any defunct processes belonging to 3562823
[2025-06-05 17:42:57] 2025-06-05 21:42:47,164 | INFO     | did not find any defunct processes belonging to 3562823
[2025-06-05 17:42:57] 2025-06-05 21:42:47,165 | INFO     | ready for new job
[2025-06-05 17:42:57] 2025-06-05 21:42:47,165 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 17:42:57] 2025-06-05 21:42:47,166 | INFO     | **************************************
[2025-06-05 17:42:57] 2025-06-05 21:42:47,166 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 17:42:57] 2025-06-05 21:42:47,166 | INFO     | **************************************
[2025-06-05 17:42:57] 2025-06-05 21:42:47,166 | INFO     | 
[2025-06-05 17:42:57] 2025-06-05 21:42:47,182 | INFO     | architecture information:
[2025-06-05 17:42:57] 2025-06-05 21:42:47,182 | INFO     | executing command: cat /etc/os-release
[2025-06-05 17:42:57] 2025-06-05 21:42:47,192 | INFO     | cat /etc/os-release:
[2025-06-05 17:42:57] NAME="CentOS Linux"
[2025-06-05 17:42:57] VERSION="7 (Core)"
[2025-06-05 17:42:57] ID="centos"
[2025-06-05 17:42:57] ID_LIKE="rhel fedora"
[2025-06-05 17:42:57] VERSION_ID="7"
[2025-06-05 17:42:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 17:42:57] ANSI_COLOR="0;31"
[2025-06-05 17:42:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 17:42:57] HOME_URL="https://www.centos.org/"
[2025-06-05 17:42:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 17:42:57] 
[2025-06-05 17:42:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 17:42:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 17:42:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 17:42:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 17:42:57] 
[2025-06-05 17:42:57] 2025-06-05 21:42:47,193 | INFO     | **************************************
[2025-06-05 17:42:57] 2025-06-05 21:42:47,695 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 17:42:57] 2025-06-05 21:42:47,715 | INFO     | sufficient remaining disk space (96593772544 B)
[2025-06-05 17:42:57] 2025-06-05 21:42:47,715 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 17:42:57] 2025-06-05 21:42:47,715 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 17:42:57] 2025-06-05 21:42:47,715 | INFO     | update_server=False
[2025-06-05 17:42:57] 2025-06-05 21:42:47,715 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 17:42:57] 2025-06-05 21:42:47,715 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:42:57] 2025-06-05 21:42:47,716 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 17:42:57] 2025-06-05 21:42:47,754 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 17:42:57] 2025-06-05 21:42:48,014 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 17:42:57] 2025-06-05 21:42:48,014 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 17:42:57] 2025-06-05 21:42:48,014 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 17:42:57] 2025-06-05 21:42:48,236 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:42:57] 2025-06-05 21:42:48,236 | INFO     | aborting loop
[2025-06-05 17:42:57] 2025-06-05 21:42:48,349 | INFO     | all payload control threads have been joined
[2025-06-05 17:42:57] 2025-06-05 21:42:48,721 | INFO     | [job] retrieve thread has finished
[2025-06-05 17:42:57] 2025-06-05 21:42:48,721 | INFO     | [job] queue monitor thread has finished
[2025-06-05 17:42:57] 2025-06-05 21:42:48,732 | INFO     | [payload] failed_post thread has finished
[2025-06-05 17:42:57] 2025-06-05 21:42:48,770 | INFO     | all data control threads have been joined
[2025-06-05 17:42:57] 2025-06-05 21:42:48,868 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 17:42:57] 2025-06-05 21:42:49,214 | INFO     | [payload] validate_post thread has finished
[2025-06-05 17:42:57] 2025-06-05 21:42:49,241 | INFO     | [job] job monitor thread has finished
[2025-06-05 17:42:57] 2025-06-05 21:42:49,329 | INFO     | all job control threads have been joined
[2025-06-05 17:42:57] 2025-06-05 21:42:49,355 | INFO     | [payload] control thread has finished
[2025-06-05 17:42:57] 2025-06-05 21:42:49,493 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 17:42:57] 2025-06-05 21:42:49,759 | INFO     | [data] copytool_out thread has finished
[2025-06-05 17:42:57] 2025-06-05 21:42:49,775 | INFO     | [data] control thread has finished
[2025-06-05 17:42:57] 2025-06-05 21:42:49,855 | INFO     | [data] copytool_in thread has finished
[2025-06-05 17:42:57] 2025-06-05 21:42:49,880 | INFO     | [job] validate thread has finished
[2025-06-05 17:42:57] 2025-06-05 21:42:50,001 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 17:42:57] 2025-06-05 21:42:50,055 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 17:42:57] 2025-06-05 21:42:50,335 | INFO     | [job] control thread has finished
[2025-06-05 17:42:57] 2025-06-05 21:42:51,721 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 17:42:57] 2025-06-05 21:42:52,460 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140265459582784)>', '<ExcThread(monitor, started 140264823838464)>']
[2025-06-05 17:42:57] 2025-06-05 21:42:53,040 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 17:42:57] 2025-06-05 21:42:53,040 | INFO     | [monitor] control thread has ended
[2025-06-05 17:42:57] 2025-06-05 21:42:57,485 | INFO     | all workflow threads have been joined
[2025-06-05 17:42:57] 2025-06-05 21:42:57,485 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 17:42:57] 2025-06-05 21:42:57,485 | INFO     | traces error code: 0
[2025-06-05 17:42:57] 2025-06-05 21:42:57,485 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 17:42:57] 2025-06-05 21:42:57,596 [wrapper] ==== pilot stdout END ====
[2025-06-05 17:42:57] 2025-06-05 21:42:57,599 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 17:42:57] 2025-06-05 21:42:57,602 [wrapper] pilotpid: 3554573
[2025-06-05 17:42:57] 2025-06-05 21:42:57,604 [wrapper] Pilot exit status: 0
[2025-06-05 17:42:57] 2025-06-05 21:42:57,615 [wrapper] pandaids: 6668532241
[2025-06-05 17:42:57] 2025-06-05 21:42:57,686 [wrapper] cleanup supervisor_pilot 3826341 3554574
[2025-06-05 17:42:57] 2025-06-05 21:42:57,689 [wrapper] Test setup, not cleaning
[2025-06-05 17:42:57] 2025-06-05 21:42:57,692 [wrapper] apfmon messages muted
[2025-06-05 17:42:57] 2025-06-05 21:42:57,695 [wrapper] ==== wrapper stdout END ====
[2025-06-05 17:42:57] 2025-06-05 21:42:57,698 [wrapper] ==== wrapper stderr END ====
[2025-06-05 17:42:57]  *** Error codes and diagnostics ***
[2025-06-05 17:42:57]     "exeErrorCode": 0,
[2025-06-05 17:42:57]     "exeErrorDiag": "",
[2025-06-05 17:42:57]     "pilotErrorCode": 0,
[2025-06-05 17:42:57]     "pilotErrorDiag": "",
[2025-06-05 17:42:57]  *** Listing of results directory ***
[2025-06-05 17:42:57] total 420868
[2025-06-05 17:42:57] -rw-r--r--. 1 boincer umatlas    495897 May 28 10:07 pilot3.tar.gz
[2025-06-05 17:42:57] -rwx------. 1 boincer umatlas     37140 May 28 10:12 runpilot2-wrapper.sh
[2025-06-05 17:42:57] -rw-r--r--. 1 boincer umatlas      5111 May 28 10:12 queuedata.json
[2025-06-05 17:42:57] -rw-r--r--. 1 boincer umatlas       100 Jun  5 15:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 17:42:57] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 15:53 run_atlas
[2025-06-05 17:42:57] -rw-r--r--. 1 boincer umatlas       105 Jun  5 15:53 job.xml
[2025-06-05 17:42:57] -rw-r--r--. 2 boincer umatlas 223875071 Jun  5 15:53 EVNT.44871834._003333.pool.root.1
[2025-06-05 17:42:57] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 15:53 start_atlas.sh
[2025-06-05 17:42:57] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 15:53 shared
[2025-06-05 17:42:57] -rw-r--r--. 2 boincer umatlas    508867 Jun  5 15:53 input.tar.gz
[2025-06-05 17:42:57] -rw-r--r--. 1 boincer umatlas         0 Jun  5 15:53 boinc_lockfile
[2025-06-05 17:42:57] -rw-r--r--. 1 boincer umatlas      2558 Jun  5 15:53 pandaJob.out
[2025-06-05 17:42:57] -rw-------. 1 boincer umatlas    987599 Jun  5 15:53 agis_schedconf.cvmfs.json
[2025-06-05 17:42:57] -rw-------. 1 boincer umatlas   1598969 Jun  5 15:54 agis_ddmendpoints.agis.ALL.json
[2025-06-05 17:42:57] drwx------. 4 boincer umatlas      4096 Jun  5 15:54 pilot3
[2025-06-05 17:42:57] -rw-r--r--. 1 boincer umatlas      6857 Jun  5 17:37 init_data.xml
[2025-06-05 17:42:57] -rw-------. 1 boincer umatlas 201336941 Jun  5 17:42 HITS.44871837._085486.pool.root.1
[2025-06-05 17:42:57] -rw-r--r--. 1 boincer umatlas       529 Jun  5 17:42 boinc_task_state.xml
[2025-06-05 17:42:57] -rw-------. 1 boincer umatlas        95 Jun  5 17:42 pilot_heartbeat.json
[2025-06-05 17:42:57] -rw-------. 1 boincer umatlas      1041 Jun  5 17:42 memory_monitor_summary.json
[2025-06-05 17:42:57] -rw-------. 1 boincer umatlas    337054 Jun  5 17:42 log.44871837._085486.job.log.tgz.1
[2025-06-05 17:42:57] -rw-------. 1 boincer umatlas      7721 Jun  5 17:42 heartbeat.json
[2025-06-05 17:42:57] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 17:42 boinc_mmap_file
[2025-06-05 17:42:57] -rw-r--r--. 1 boincer umatlas        27 Jun  5 17:42 wrapper_checkpoint.txt
[2025-06-05 17:42:57] -rw-------. 1 boincer umatlas      4353 Jun  5 17:42 pilotlog.txt
[2025-06-05 17:42:57] -rw-------. 1 boincer umatlas    624677 Jun  5 17:42 log.44871837._085486.job.log.1
[2025-06-05 17:42:57] -rw-------. 1 boincer umatlas       357 Jun  5 17:42 output.list
[2025-06-05 17:42:57] -rw-r--r--. 1 boincer umatlas       620 Jun  5 17:42 runtime_log
[2025-06-05 17:42:57] -rw-------. 1 boincer umatlas    983040 Jun  5 17:42 result.tar.gz
[2025-06-05 17:42:57] -rw-------. 1 boincer umatlas       654 Jun  5 17:42 wUSKDmAhWe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYdTKDme9hPOn.diag
[2025-06-05 17:42:57] -rw-r--r--. 1 boincer umatlas      8664 Jun  5 17:42 runtime_log.err
[2025-06-05 17:42:57] -rw-r--r--. 1 boincer umatlas     20837 Jun  5 17:42 stderr.txt
[2025-06-05 17:42:57] HITS file was successfully produced:
[2025-06-05 17:42:57] -rw-------. 1 boincer umatlas 201336941 Jun  5 17:42 shared/HITS.pool.root.1
[2025-06-05 17:42:57]  *** Contents of shared directory: ***
[2025-06-05 17:42:57] total 416728
[2025-06-05 17:42:57] -rw-r--r--. 2 boincer umatlas 223875071 Jun  5 15:53 ATLAS.root_0
[2025-06-05 17:42:57] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 15:53 start_atlas.sh
[2025-06-05 17:42:57] -rw-r--r--. 2 boincer umatlas    508867 Jun  5 15:53 input.tar.gz
[2025-06-05 17:42:57] -rw-------. 1 boincer umatlas 201336941 Jun  5 17:42 HITS.pool.root.1
[2025-06-05 17:42:57] -rw-------. 1 boincer umatlas    983040 Jun  5 17:42 result.tar.gz
17:42:59 (3550749): run_atlas exited; CPU time 48028.314100
17:42:59 (3550749): called boinc_finish(0)

</stderr_txt>
]]>

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