Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:43:17 (31843): wrapper (7.7.26015): starting
15:43:17 (31843): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 15:43:17] Arguments: --nthreads 4
[2025-06-05 15:43:17] Threads: 4
[2025-06-05 15:43:17] Checking for CVMFS
[2025-06-05 15:43:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 15:43:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 15:43:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 15:43:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 15:43:18] 2.11.2.0 26179 451615 88348 146830 3 1 12846943 20275201 1 130560 0 46786686 99.985 19862716 19145 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 15:43:18] CVMFS is ok
[2025-06-05 15:43:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 15:43:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 15:43:18] Further information can be found at the LHC@home message board.
[2025-06-05 15:43:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 15:43:18] Checking for apptainer binary...
[2025-06-05 15:43:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 15:43:18] Running /usr/bin/apptainer --version
[2025-06-05 15:43:18] apptainer version 1.3.2-1.el7
[2025-06-05 15:43:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 15:43:18] c-205-33.aglt2.org
[2025-06-05 15:43:18] apptainer works
[2025-06-05 15:43:18] Set ATHENA_PROC_NUMBER=4
[2025-06-05 15:43:18] Set ATHENA_CORE_NUMBER=4
[2025-06-05 15:43:18] Starting ATLAS job with PandaID=6668531489
[2025-06-05 15:43:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 17:59:20]  *** The last 200 lines of the pilot log: ***
[2025-06-05 17:59:20] 2025-06-05 21:58:58,391 | WARNING  | process 9869 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 17:59:20] 2025-06-05 21:58:58,392 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668531489/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 17:59:20] 2025-06-05 21:58:58,424 | INFO     | number of running child processes to parent process 9869: 1
[2025-06-05 17:59:20] 2025-06-05 21:58:58,424 | INFO     | maximum number of monitored processes: 6
[2025-06-05 17:59:20] 2025-06-05 21:59:00,926 | INFO     | monitor loop #609: job 0:6668531489 is in state 'finished'
[2025-06-05 17:59:20] 2025-06-05 21:59:00,926 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:59:20] 2025-06-05 21:59:01,210 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 17:59:20] 2025-06-05 21:59:01,210 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668531489/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 17:59:20] 2025-06-05 21:59:01,210 | INFO     | extracted standard info from prmon json
[2025-06-05 17:59:20] 2025-06-05 21:59:01,210 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 17:59:20] 2025-06-05 21:59:01,210 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 17:59:20] 2025-06-05 21:59:01,211 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 17:59:20] 2025-06-05 21:59:01,211 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 17:59:20] 2025-06-05 21:59:01,212 | INFO     | fitting pss+swap vs Time
[2025-06-05 17:59:20] 2025-06-05 21:59:01,212 | INFO     | sum of square deviations: 729472282.0
[2025-06-05 17:59:20] 2025-06-05 21:59:01,212 | INFO     | sum of deviations: -11293276845.999998
[2025-06-05 17:59:20] 2025-06-05 21:59:01,212 | INFO     | mean x: 1749156656.0
[2025-06-05 17:59:20] 2025-06-05 21:59:01,213 | INFO     | mean y: 2362517.082706767
[2025-06-05 17:59:20] 2025-06-05 21:59:01,213 | INFO     | -- intersect: 27081815500.645947
[2025-06-05 17:59:20] 2025-06-05 21:59:01,213 | INFO     | intersect: 27081815500.645947
[2025-06-05 17:59:20] 2025-06-05 21:59:01,213 | INFO     | chi2: 1.2351716033142572
[2025-06-05 17:59:20] 2025-06-05 21:59:01,213 | INFO     | sum of square deviations: 650252192.0
[2025-06-05 17:59:20] 2025-06-05 21:59:01,214 | INFO     | sum of deviations: -10648764906.5
[2025-06-05 17:59:20] 2025-06-05 21:59:01,214 | INFO     | mean x: 1749156503.5
[2025-06-05 17:59:20] 2025-06-05 21:59:01,214 | INFO     | mean y: 2363758.3671875
[2025-06-05 17:59:20] 2025-06-05 21:59:01,214 | INFO     | -- intersect: 28647182829.499275
[2025-06-05 17:59:20] 2025-06-05 21:59:01,214 | INFO     | intersect: 28647182829.499275
[2025-06-05 17:59:20] 2025-06-05 21:59:01,214 | INFO     | chi2: 1.2320897233957657
[2025-06-05 17:59:20] 2025-06-05 21:59:01,214 | INFO     | current chi2=1.2320897233957657 (change=0.249510263207323 %)
[2025-06-05 17:59:20] 2025-06-05 21:59:01,214 | INFO     | right removable region: 127
[2025-06-05 17:59:20] 2025-06-05 21:59:01,214 | INFO     | sum of square deviations: 650252192.0
[2025-06-05 17:59:20] 2025-06-05 21:59:01,214 | INFO     | sum of deviations: -21549120073.5
[2025-06-05 17:59:20] 2025-06-05 21:59:01,214 | INFO     | mean x: 1749156808.5
[2025-06-05 17:59:20] 2025-06-05 21:59:01,214 | INFO     | mean y: 2381615.2421875
[2025-06-05 17:59:20] 2025-06-05 21:59:01,214 | INFO     | -- intersect: 57968799195.18715
[2025-06-05 17:59:20] 2025-06-05 21:59:01,215 | INFO     | intersect: 57968799195.18715
[2025-06-05 17:59:20] 2025-06-05 21:59:01,215 | INFO     | chi2: 0.14897195163066257
[2025-06-05 17:59:20] 2025-06-05 21:59:01,215 | INFO     | current chi2=0.14897195163066257 (change=87.93916964809299 %)
[2025-06-05 17:59:20] 2025-06-05 21:59:01,215 | INFO     | sum of square deviations: 576985702.0
[2025-06-05 17:59:20] 2025-06-05 21:59:01,215 | INFO     | sum of deviations: -17664044316.999996
[2025-06-05 17:59:20] 2025-06-05 21:59:01,215 | INFO     | mean x: 1749156961.0
[2025-06-05 17:59:20] 2025-06-05 21:59:01,215 | INFO     | mean y: 2373513.2845528456
[2025-06-05 17:59:20] 2025-06-05 21:59:01,215 | INFO     | -- intersect: 53551683261.15944
[2025-06-05 17:59:20] 2025-06-05 21:59:01,215 | INFO     | intersect: 53551683261.15944
[2025-06-05 17:59:20] 2025-06-05 21:59:01,215 | INFO     | chi2: 0.14362096350675174
[2025-06-05 17:59:20] 2025-06-05 21:59:01,215 | INFO     | current chi2=0.14362096350675174 (change=3.5919433593628542 %)
[2025-06-05 17:59:20] 2025-06-05 21:59:01,215 | INFO     | left removable region: 20
[2025-06-05 17:59:20] 2025-06-05 21:59:01,216 | INFO     | sum of square deviations: 379832238.0
[2025-06-05 17:59:20] 2025-06-05 21:59:01,216 | INFO     | sum of deviations: -8520618287.0
[2025-06-05 17:59:20] 2025-06-05 21:59:01,216 | INFO     | mean x: 1749157083.0
[2025-06-05 17:59:20] 2025-06-05 21:59:01,216 | INFO     | mean y: 2354267.6074766354
[2025-06-05 17:59:20] 2025-06-05 21:59:01,216 | INFO     | -- intersect: 39240466089.60974
[2025-06-05 17:59:20] 2025-06-05 21:59:01,216 | INFO     | intersect: 39240466089.60974
[2025-06-05 17:59:20] 2025-06-05 21:59:01,217 | INFO     | chi2: 0.10548409911492622
[2025-06-05 17:59:20] 2025-06-05 21:59:01,217 | INFO     | -- intersect: 39240466089.60974
[2025-06-05 17:59:20] 2025-06-05 21:59:01,217 | INFO     | current memory leak: -22.43 B/s (using 107 data points, chi2=0.11)
[2025-06-05 17:59:20] 2025-06-05 21:59:01,217 | INFO     | ..............................
[2025-06-05 17:59:20] 2025-06-05 21:59:01,217 | INFO     | . Timing measurements:
[2025-06-05 17:59:20] 2025-06-05 21:59:01,217 | INFO     | . get job = 0 s
[2025-06-05 17:59:20] 2025-06-05 21:59:01,217 | INFO     | . initial setup = 2 s
[2025-06-05 17:59:20] 2025-06-05 21:59:01,217 | INFO     | . payload setup = 5 s
[2025-06-05 17:59:20] 2025-06-05 21:59:01,217 | INFO     | . stage-in = 0 s
[2025-06-05 17:59:20] 2025-06-05 21:59:01,217 | INFO     | . payload execution = 8105 s
[2025-06-05 17:59:20] 2025-06-05 21:59:01,217 | INFO     | . stage-out = 0 s
[2025-06-05 17:59:20] 2025-06-05 21:59:01,217 | INFO     | . log creation = 0 s
[2025-06-05 17:59:20] 2025-06-05 21:59:01,217 | INFO     | ..............................
[2025-06-05 17:59:20] 2025-06-05 21:59:01,260 | INFO     | 
[2025-06-05 17:59:20] 2025-06-05 21:59:01,260 | INFO     | job summary report
[2025-06-05 17:59:20] 2025-06-05 21:59:01,260 | INFO     | --------------------------------------------------
[2025-06-05 17:59:20] 2025-06-05 21:59:01,260 | INFO     | PanDA job id: 6668531489
[2025-06-05 17:59:20] 2025-06-05 21:59:01,260 | INFO     | task id: 44871837
[2025-06-05 17:59:20] 2025-06-05 21:59:01,260 | INFO     | errors: (none)
[2025-06-05 17:59:20] 2025-06-05 21:59:01,260 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 17:59:20] 2025-06-05 21:59:01,260 | INFO     | pilot state: finished 
[2025-06-05 17:59:20] 2025-06-05 21:59:01,260 | INFO     | transexitcode: 0
[2025-06-05 17:59:20] 2025-06-05 21:59:01,260 | INFO     | exeerrorcode: 0
[2025-06-05 17:59:20] 2025-06-05 21:59:01,261 | INFO     | exeerrordiag: 
[2025-06-05 17:59:20] 2025-06-05 21:59:01,261 | INFO     | exitcode: 0
[2025-06-05 17:59:20] 2025-06-05 21:59:01,261 | INFO     | exitmsg: OK
[2025-06-05 17:59:20] 2025-06-05 21:59:01,261 | INFO     | cpuconsumptiontime: 31475 s
[2025-06-05 17:59:20] 2025-06-05 21:59:01,261 | INFO     | nevents: 400
[2025-06-05 17:59:20] 2025-06-05 21:59:01,261 | INFO     | neventsw: 0
[2025-06-05 17:59:20] 2025-06-05 21:59:01,261 | INFO     | pid: 9869
[2025-06-05 17:59:20] 2025-06-05 21:59:01,261 | INFO     | pgrp: 9869
[2025-06-05 17:59:20] 2025-06-05 21:59:01,261 | INFO     | corecount: 4
[2025-06-05 17:59:20] 2025-06-05 21:59:01,261 | INFO     | event service: False
[2025-06-05 17:59:20] 2025-06-05 21:59:01,261 | INFO     | sizes: {0: 2397392, 3: 2397598, 11: 2397626, 8114: 2425357, 8115: 2425356, 8116: 2434353, 8117: 2434537, 8121: 2434707}
[2025-06-05 17:59:20] 2025-06-05 21:59:01,261 | INFO     | --------------------------------------------------
[2025-06-05 17:59:20] 2025-06-05 21:59:01,261 | INFO     | 
[2025-06-05 17:59:20] 2025-06-05 21:59:01,261 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 17:59:20] 2025-06-05 21:59:01,272 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 17:59:20] 2025-06-05 21:59:01,272 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 17:59:20] 2025-06-05 21:59:01,272 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 17:59:20] 2025-06-05 21:59:01,272 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 17:59:20] 2025-06-05 21:59:01,272 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 17:59:20] 2025-06-05 21:59:01,272 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 17:59:20] 2025-06-05 21:59:01,272 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 17:59:20] 2025-06-05 21:59:01,272 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 17:59:20] 2025-06-05 21:59:01,272 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 17:59:20] 2025-06-05 21:59:01,272 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 17:59:20] 2025-06-05 21:59:01,272 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 17:59:20] 2025-06-05 21:59:01,273 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 17:59:20] 2025-06-05 21:59:01,273 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 17:59:20] 2025-06-05 21:59:01,273 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 17:59:20] 2025-06-05 21:59:01,273 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 17:59:20] 2025-06-05 21:59:01,273 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 17:59:20] 2025-06-05 21:59:01,273 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 17:59:20] 2025-06-05 21:59:01,273 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 17:59:20] 2025-06-05 21:59:01,273 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 17:59:20] 2025-06-05 21:59:01,273 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 17:59:20] 2025-06-05 21:59:01,273 | INFO     | job 6668531489 has completed (purged errors)
[2025-06-05 17:59:20] 2025-06-05 21:59:01,273 | INFO     | overall cleanup function is called
[2025-06-05 17:59:20] 2025-06-05 21:59:02,278 | INFO     | --- collectZombieJob: --- 10, [9869]
[2025-06-05 17:59:20] 2025-06-05 21:59:02,278 | INFO     | zombie collector waiting for pid 9869
[2025-06-05 17:59:20] 2025-06-05 21:59:02,295 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 17:59:20] 2025-06-05 21:59:02,295 | INFO     | collected zombie processes
[2025-06-05 17:59:20] 2025-06-05 21:59:02,295 | INFO     | will attempt to kill all subprocesses of pid=9869
[2025-06-05 17:59:20] 2025-06-05 21:59:02,328 | INFO     | process IDs to be killed: [9869] (in reverse order)
[2025-06-05 17:59:20] 2025-06-05 21:59:02,350 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 17:59:20] 2025-06-05 21:59:02,350 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 17:59:20] 2025-06-05 21:59:02,351 | INFO     | did not find any defunct processes belonging to 9869
[2025-06-05 17:59:20] 2025-06-05 21:59:02,352 | INFO     | did not find any defunct processes belonging to 9869
[2025-06-05 17:59:20] 2025-06-05 21:59:02,352 | INFO     | ready for new job
[2025-06-05 17:59:20] 2025-06-05 21:59:02,352 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 17:59:20] 2025-06-05 21:59:02,353 | INFO     | **************************************
[2025-06-05 17:59:20] 2025-06-05 21:59:02,353 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 17:59:20] 2025-06-05 21:59:02,353 | INFO     | **************************************
[2025-06-05 17:59:20] 2025-06-05 21:59:02,353 | INFO     | 
[2025-06-05 17:59:20] 2025-06-05 21:59:02,353 | INFO     | architecture information:
[2025-06-05 17:59:20] 2025-06-05 21:59:02,354 | INFO     | executing command: cat /etc/os-release
[2025-06-05 17:59:20] 2025-06-05 21:59:02,362 | INFO     | cat /etc/os-release:
[2025-06-05 17:59:20] NAME="CentOS Linux"
[2025-06-05 17:59:20] VERSION="7 (Core)"
[2025-06-05 17:59:20] ID="centos"
[2025-06-05 17:59:20] ID_LIKE="rhel fedora"
[2025-06-05 17:59:20] VERSION_ID="7"
[2025-06-05 17:59:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 17:59:20] ANSI_COLOR="0;31"
[2025-06-05 17:59:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 17:59:20] HOME_URL="https://www.centos.org/"
[2025-06-05 17:59:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 17:59:20] 
[2025-06-05 17:59:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 17:59:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 17:59:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 17:59:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 17:59:20] 
[2025-06-05 17:59:20] 2025-06-05 21:59:02,362 | INFO     | **************************************
[2025-06-05 17:59:20] 2025-06-05 21:59:02,865 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 17:59:20] 2025-06-05 21:59:02,886 | INFO     | sufficient remaining disk space (18594398208 B)
[2025-06-05 17:59:20] 2025-06-05 21:59:02,886 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 17:59:20] 2025-06-05 21:59:02,887 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 17:59:20] 2025-06-05 21:59:02,887 | INFO     | update_server=False
[2025-06-05 17:59:20] 2025-06-05 21:59:02,887 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 17:59:20] 2025-06-05 21:59:02,888 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:59:20] 2025-06-05 21:59:02,888 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:59:20] 2025-06-05 21:59:02,888 | INFO     | aborting loop
[2025-06-05 17:59:20] 2025-06-05 21:59:02,959 | INFO     | all data control threads have been joined
[2025-06-05 17:59:20] 2025-06-05 21:59:03,284 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 17:59:20] 2025-06-05 21:59:03,495 | INFO     | all payload control threads have been joined
[2025-06-05 17:59:20] 2025-06-05 21:59:03,605 | INFO     | PID=3474 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-05 17:59:20] 2025-06-05 21:59:03,605 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 17:59:20] 2025-06-05 21:59:03,605 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 17:59:20] 2025-06-05 21:59:03,605 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 17:59:20] 2025-06-05 21:59:03,719 | INFO     | all job control threads have been joined
[2025-06-05 17:59:20] 2025-06-05 21:59:03,893 | INFO     | [job] retrieve thread has finished
[2025-06-05 17:59:20] 2025-06-05 21:59:03,894 | INFO     | [job] queue monitor thread has finished
[2025-06-05 17:59:20] 2025-06-05 21:59:03,894 | INFO     | [job] job monitor thread has finished
[2025-06-05 17:59:20] 2025-06-05 21:59:03,914 | INFO     | [payload] failed_post thread has finished
[2025-06-05 17:59:20] 2025-06-05 21:59:03,960 | INFO     | [data] control thread has finished
[2025-06-05 17:59:20] 2025-06-05 21:59:04,328 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 17:59:20] 2025-06-05 21:59:04,461 | INFO     | [payload] validate_post thread has finished
[2025-06-05 17:59:20] 2025-06-05 21:59:04,498 | INFO     | [payload] control thread has finished
[2025-06-05 17:59:20] 2025-06-05 21:59:04,724 | INFO     | [job] control thread has finished
[2025-06-05 17:59:20] 2025-06-05 21:59:04,833 | INFO     | [job] validate thread has finished
[2025-06-05 17:59:20] 2025-06-05 21:59:04,834 | INFO     | [data] copytool_in thread has finished
[2025-06-05 17:59:20] 2025-06-05 21:59:04,889 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 17:59:20] 2025-06-05 21:59:05,087 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 17:59:20] 2025-06-05 21:59:05,090 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 17:59:20] 2025-06-05 21:59:06,331 | INFO     | [data] copytool_out thread has finished
[2025-06-05 17:59:20] 2025-06-05 21:59:07,290 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 17:59:20] 2025-06-05 21:59:13,621 | INFO     | job.realtimelogging is not enabled
[2025-06-05 17:59:20] 2025-06-05 21:59:14,739 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 17:59:20] 2025-06-05 21:59:14,891 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139703042946880)>', '<ExcThread(monitor, started 139702816057088)>']
[2025-06-05 17:59:20] 2025-06-05 21:59:15,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 17:59:20] 2025-06-05 21:59:15,650 | INFO     | [monitor] control thread has ended
[2025-06-05 17:59:20] 2025-06-05 21:59:19,917 | INFO     | all workflow threads have been joined
[2025-06-05 17:59:20] 2025-06-05 21:59:19,917 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 17:59:20] 2025-06-05 21:59:19,917 | INFO     | traces error code: 0
[2025-06-05 17:59:20] 2025-06-05 21:59:19,917 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 17:59:20] 2025-06-05 21:59:19,979 [wrapper] ==== pilot stdout END ====
[2025-06-05 17:59:20] 2025-06-05 21:59:19,981 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 17:59:20] 2025-06-05 21:59:19,983 [wrapper] pilotpid: 3474
[2025-06-05 17:59:20] 2025-06-05 21:59:19,985 [wrapper] Pilot exit status: 0
[2025-06-05 17:59:20] 2025-06-05 21:59:19,991 [wrapper] pandaids: 6668531489
[2025-06-05 17:59:20] 2025-06-05 21:59:20,006 [wrapper] cleanup supervisor_pilot 21092 3475
[2025-06-05 17:59:20] 2025-06-05 21:59:20,008 [wrapper] Test setup, not cleaning
[2025-06-05 17:59:20] 2025-06-05 21:59:20,010 [wrapper] apfmon messages muted
[2025-06-05 17:59:20] 2025-06-05 21:59:20,011 [wrapper] ==== wrapper stdout END ====
[2025-06-05 17:59:20] 2025-06-05 21:59:20,013 [wrapper] ==== wrapper stderr END ====
[2025-06-05 17:59:20]  *** Error codes and diagnostics ***
[2025-06-05 17:59:20]     "exeErrorCode": 0,
[2025-06-05 17:59:20]     "exeErrorDiag": "",
[2025-06-05 17:59:20]     "pilotErrorCode": 0,
[2025-06-05 17:59:20]     "pilotErrorDiag": "",
[2025-06-05 17:59:20]  *** Listing of results directory ***
[2025-06-05 17:59:20] total 427044
[2025-06-05 17:59:20] -rw-r--r-- 1 boincer umatlas    495897 May 28 09:51 pilot3.tar.gz
[2025-06-05 17:59:20] -rw-r--r-- 1 boincer umatlas      5111 May 28 09:52 queuedata.json
[2025-06-05 17:59:20] -rwx------ 1 boincer umatlas     37140 May 28 09:52 runpilot2-wrapper.sh
[2025-06-05 17:59:20] -rw-r--r-- 1 boincer umatlas       100 Jun  5 15:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 17:59:20] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 15:43 run_atlas
[2025-06-05 17:59:20] -rw-r--r-- 1 boincer umatlas       105 Jun  5 15:43 job.xml
[2025-06-05 17:59:20] -rw-r--r-- 2 boincer umatlas 226349662 Jun  5 15:43 EVNT.44871834._003324.pool.root.1
[2025-06-05 17:59:20] drwxrwx--x 2 boincer umatlas      4096 Jun  5 15:43 shared
[2025-06-05 17:59:20] -rw-r--r-- 2 boincer umatlas    508877 Jun  5 15:43 input.tar.gz
[2025-06-05 17:59:20] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 15:43 start_atlas.sh
[2025-06-05 17:59:20] -rw-r--r-- 1 boincer umatlas         0 Jun  5 15:43 boinc_lockfile
[2025-06-05 17:59:20] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 15:43 pandaJob.out
[2025-06-05 17:59:20] -rw------- 1 boincer umatlas    987599 Jun  5 15:43 agis_schedconf.cvmfs.json
[2025-06-05 17:59:20] -rw------- 1 boincer umatlas   1598969 Jun  5 15:43 agis_ddmendpoints.agis.ALL.json
[2025-06-05 17:59:20] drwx------ 4 boincer umatlas      4096 Jun  5 15:43 pilot3
[2025-06-05 17:59:20] -rw-r--r-- 1 boincer umatlas      6153 Jun  5 17:55 init_data.xml
[2025-06-05 17:59:20] -rw------- 1 boincer umatlas        95 Jun  5 17:58 pilot_heartbeat.json
[2025-06-05 17:59:20] -rw------- 1 boincer umatlas 205076958 Jun  5 17:58 HITS.44871837._085246.pool.root.1
[2025-06-05 17:59:20] -rw-r--r-- 1 boincer umatlas       529 Jun  5 17:58 boinc_task_state.xml
[2025-06-05 17:59:20] -rw------- 1 boincer umatlas      1042 Jun  5 17:58 memory_monitor_summary.json
[2025-06-05 17:59:20] -rw------- 1 boincer umatlas    268848 Jun  5 17:58 log.44871837._085246.job.log.tgz.1
[2025-06-05 17:59:20] -rw------- 1 boincer umatlas      7737 Jun  5 17:59 heartbeat.json
[2025-06-05 17:59:20] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 17:59 boinc_mmap_file
[2025-06-05 17:59:20] -rw-r--r-- 1 boincer umatlas        27 Jun  5 17:59 wrapper_checkpoint.txt
[2025-06-05 17:59:20] -rw------- 1 boincer umatlas      4741 Jun  5 17:59 pilotlog.txt
[2025-06-05 17:59:20] -rw------- 1 boincer umatlas    746823 Jun  5 17:59 log.44871837._085246.job.log.1
[2025-06-05 17:59:20] -rw------- 1 boincer umatlas       357 Jun  5 17:59 output.list
[2025-06-05 17:59:20] -rw-r--r-- 1 boincer umatlas       620 Jun  5 17:59 runtime_log
[2025-06-05 17:59:20] -rw------- 1 boincer umatlas   1034240 Jun  5 17:59 result.tar.gz
[2025-06-05 17:59:20] -rw------- 1 boincer umatlas       656 Jun  5 17:59 S8EODm5NWe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5HcKDmeulQ0m.diag
[2025-06-05 17:59:20] -rw-r--r-- 1 boincer umatlas      8659 Jun  5 17:59 runtime_log.err
[2025-06-05 17:59:20] -rw-r--r-- 1 boincer umatlas     21110 Jun  5 17:59 stderr.txt
[2025-06-05 17:59:20] HITS file was successfully produced:
[2025-06-05 17:59:20] -rw------- 1 boincer umatlas 205076958 Jun  5 17:58 shared/HITS.pool.root.1
[2025-06-05 17:59:20]  *** Contents of shared directory: ***
[2025-06-05 17:59:20] total 422852
[2025-06-05 17:59:20] -rw-r--r-- 2 boincer umatlas 226349662 Jun  5 15:43 ATLAS.root_0
[2025-06-05 17:59:20] -rw-r--r-- 2 boincer umatlas    508877 Jun  5 15:43 input.tar.gz
[2025-06-05 17:59:20] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 15:43 start_atlas.sh
[2025-06-05 17:59:20] -rw------- 1 boincer umatlas 205076958 Jun  5 17:58 HITS.pool.root.1
[2025-06-05 17:59:20] -rw------- 1 boincer umatlas   1034240 Jun  5 17:59 result.tar.gz
17:59:21 (31843): run_atlas exited; CPU time 31496.415422
17:59:21 (31843): called boinc_finish(0)

</stderr_txt>
]]>

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