Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:12:10 (6792): wrapper (7.7.26015): starting
22:12:10 (6792): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 22:12:10] Arguments: --nthreads 8
[2025-06-05 22:12:10] Threads: 8
[2025-06-05 22:12:10] Checking for CVMFS
[2025-06-05 22:12:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 22:12:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 22:12:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 22:12:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 22:12:12] 2.11.2.0 14372 35100 99280 146830 0 16 14816642 25165824 2362 130560 0 17834514 99.828 20069280 2213 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 22:12:12] CVMFS is ok
[2025-06-05 22:12:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 22:12:12] Checking for apptainer binary...
[2025-06-05 22:12:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 22:12:12] Running /usr/bin/apptainer --version
[2025-06-05 22:12:12] apptainer version 1.3.2-1.el7
[2025-06-05 22:12:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 22:12:34] cg-vwn440.simple-grid.lan
[2025-06-05 22:12:34] apptainer works
[2025-06-05 22:12:34] Set ATHENA_PROC_NUMBER=8
[2025-06-05 22:12:34] Set ATHENA_CORE_NUMBER=8
[2025-06-05 22:12:34] Starting ATLAS job with PandaID=6668327229
[2025-06-05 22:12:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/31 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 03:39:53]  *** The last 200 lines of the pilot log: ***
[2025-06-06 03:39:53] 2025-06-06 01:36:01,949 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 03:39:53] 2025-06-06 01:36:01,949 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 03:39:53] 2025-06-06 01:36:01,955 | INFO     | fitting pss+swap vs Time
[2025-06-06 03:39:53] 2025-06-06 01:36:01,956 | INFO     | sum of square deviations: 8797783560.0
[2025-06-06 03:39:53] 2025-06-06 01:36:01,959 | INFO     | sum of deviations: 93625542377.0
[2025-06-06 03:39:53] 2025-06-06 01:36:01,959 | INFO     | mean x: 1749164330.0
[2025-06-06 03:39:53] 2025-06-06 01:36:01,960 | INFO     | mean y: 2466716.5081967213
[2025-06-06 03:39:53] 2025-06-06 01:36:01,960 | INFO     | -- intersect: -18612046585.1525
[2025-06-06 03:39:53] 2025-06-06 01:36:01,960 | INFO     | intersect: -18612046585.1525
[2025-06-06 03:39:53] 2025-06-06 01:36:01,960 | INFO     | chi2: 8.166303182996081
[2025-06-06 03:39:53] 2025-06-06 01:36:01,961 | INFO     | sum of square deviations: 8372156975.0
[2025-06-06 03:39:53] 2025-06-06 01:36:01,964 | INFO     | sum of deviations: 113190459361.0
[2025-06-06 03:39:53] 2025-06-06 01:36:01,964 | INFO     | mean x: 1749164177.5
[2025-06-06 03:39:53] 2025-06-06 01:36:01,964 | INFO     | mean y: 2473624.76
[2025-06-06 03:39:53] 2025-06-06 01:36:01,964 | INFO     | -- intersect: -23645995621.605362
[2025-06-06 03:39:53] 2025-06-06 01:36:01,964 | INFO     | intersect: -23645995621.605362
[2025-06-06 03:39:53] 2025-06-06 01:36:01,965 | INFO     | chi2: 7.378687346095115
[2025-06-06 03:39:53] 2025-06-06 01:36:01,965 | INFO     | current chi2=7.378687346095115 (change=9.64470482238456 %)
[2025-06-06 03:39:53] 2025-06-06 01:36:01,965 | INFO     | right removable region: 299
[2025-06-06 03:39:53] 2025-06-06 01:36:01,966 | INFO     | sum of square deviations: 8372156975.0
[2025-06-06 03:39:53] 2025-06-06 01:36:01,968 | INFO     | sum of deviations: -14817757812.499989
[2025-06-06 03:39:53] 2025-06-06 01:36:01,969 | INFO     | mean x: 1749164482.5
[2025-06-06 03:39:53] 2025-06-06 01:36:01,969 | INFO     | mean y: 2505553.0433333335
[2025-06-06 03:39:53] 2025-06-06 01:36:01,969 | INFO     | -- intersect: 3098326110.792954
[2025-06-06 03:39:53] 2025-06-06 01:36:01,969 | INFO     | intersect: 3098326110.792954
[2025-06-06 03:39:53] 2025-06-06 01:36:01,969 | INFO     | chi2: 3.1797415650268617
[2025-06-06 03:39:53] 2025-06-06 01:36:01,969 | INFO     | current chi2=3.1797415650268617 (change=61.06265596839784 %)
[2025-06-06 03:39:53] 2025-06-06 01:36:01,970 | INFO     | sum of square deviations: 7960484140.0
[2025-06-06 03:39:53] 2025-06-06 01:36:01,973 | INFO     | sum of deviations: -81645340505.0
[2025-06-06 03:39:53] 2025-06-06 01:36:01,973 | INFO     | mean x: 1749164635.0
[2025-06-06 03:39:53] 2025-06-06 01:36:01,973 | INFO     | mean y: 2530228.5559322033
[2025-06-06 03:39:53] 2025-06-06 01:36:01,973 | INFO     | -- intersect: 17942537357.805614
[2025-06-06 03:39:53] 2025-06-06 01:36:01,973 | INFO     | intersect: 17942537357.805614
[2025-06-06 03:39:53] 2025-06-06 01:36:01,974 | INFO     | chi2: 1.1510458398630956
[2025-06-06 03:39:53] 2025-06-06 01:36:01,974 | INFO     | current chi2=1.1510458398630956 (change=63.80064806136622 %)
[2025-06-06 03:39:53] 2025-06-06 01:36:01,974 | INFO     | sum of square deviations: 7562532492.5
[2025-06-06 03:39:53] 2025-06-06 01:36:01,977 | INFO     | sum of deviations: -84901745137.5
[2025-06-06 03:39:53] 2025-06-06 01:36:01,977 | INFO     | mean x: 1749164787.5
[2025-06-06 03:39:53] 2025-06-06 01:36:01,977 | INFO     | mean y: 2531447.955172414
[2025-06-06 03:39:53] 2025-06-06 01:36:01,977 | INFO     | -- intersect: 19639755240.261986
[2025-06-06 03:39:53] 2025-06-06 01:36:01,977 | INFO     | intersect: 19639755240.261986
[2025-06-06 03:39:53] 2025-06-06 01:36:01,978 | INFO     | chi2: 1.110777419690144
[2025-06-06 03:39:53] 2025-06-06 01:36:01,978 | INFO     | current chi2=1.110777419690144 (change=3.498420199993165 %)
[2025-06-06 03:39:53] 2025-06-06 01:36:01,978 | INFO     | left removable region: 30
[2025-06-06 03:39:53] 2025-06-06 01:36:01,979 | INFO     | sum of square deviations: 6035722470.0
[2025-06-06 03:39:53] 2025-06-06 01:36:01,981 | INFO     | sum of deviations: -37318908790.0
[2025-06-06 03:39:53] 2025-06-06 01:36:01,981 | INFO     | mean x: 1749165062.0
[2025-06-06 03:39:53] 2025-06-06 01:36:01,981 | INFO     | mean y: 2528764.133828996
[2025-06-06 03:39:53] 2025-06-06 01:36:01,981 | INFO     | -- intersect: 10817626995.022615
[2025-06-06 03:39:53] 2025-06-06 01:36:01,981 | INFO     | intersect: 10817626995.022615
[2025-06-06 03:39:53] 2025-06-06 01:36:01,982 | INFO     | chi2: 0.1938678230091486
[2025-06-06 03:39:53] 2025-06-06 01:36:01,982 | INFO     | -- intersect: 10817626995.022615
[2025-06-06 03:39:53] 2025-06-06 01:36:01,982 | INFO     | current memory leak: -6.18 B/s (using 269 data points, chi2=0.19)
[2025-06-06 03:39:53] 2025-06-06 01:36:01,983 | INFO     | ..............................
[2025-06-06 03:39:53] 2025-06-06 01:36:01,983 | INFO     | . Timing measurements:
[2025-06-06 03:39:53] 2025-06-06 01:36:01,983 | INFO     | . get job = 0 s
[2025-06-06 03:39:53] 2025-06-06 01:36:01,984 | INFO     | . initial setup = 11 s
[2025-06-06 03:39:53] 2025-06-06 01:36:01,984 | INFO     | . payload setup = 173 s
[2025-06-06 03:39:53] 2025-06-06 01:36:01,984 | INFO     | . stage-in = 0 s
[2025-06-06 03:39:53] 2025-06-06 01:36:01,984 | INFO     | . payload execution = 18748 s
[2025-06-06 03:39:53] 2025-06-06 01:36:01,984 | INFO     | . stage-out = 4 s
[2025-06-06 03:39:53] 2025-06-06 01:36:01,984 | INFO     | . log creation = 1 s
[2025-06-06 03:39:53] 2025-06-06 01:36:01,984 | INFO     | ..............................
[2025-06-06 03:39:53] 2025-06-06 01:36:02,126 | INFO     | 
[2025-06-06 03:39:53] 2025-06-06 01:36:02,127 | INFO     | job summary report
[2025-06-06 03:39:53] 2025-06-06 01:36:02,127 | INFO     | --------------------------------------------------
[2025-06-06 03:39:53] 2025-06-06 01:36:02,127 | INFO     | PanDA job id: 6668327229
[2025-06-06 03:39:53] 2025-06-06 01:36:02,127 | INFO     | task id: 44871837
[2025-06-06 03:39:53] 2025-06-06 01:36:02,127 | INFO     | errors: (none)
[2025-06-06 03:39:53] 2025-06-06 01:36:02,127 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 03:39:53] 2025-06-06 01:36:02,127 | INFO     | pilot state: finished 
[2025-06-06 03:39:53] 2025-06-06 01:36:02,127 | INFO     | transexitcode: 0
[2025-06-06 03:39:53] 2025-06-06 01:36:02,127 | INFO     | exeerrorcode: 0
[2025-06-06 03:39:53] 2025-06-06 01:36:02,127 | INFO     | exeerrordiag: 
[2025-06-06 03:39:53] 2025-06-06 01:36:02,128 | INFO     | exitcode: 0
[2025-06-06 03:39:53] 2025-06-06 01:36:02,128 | INFO     | exitmsg: OK
[2025-06-06 03:39:53] 2025-06-06 01:36:02,128 | INFO     | cpuconsumptiontime: 70917 s
[2025-06-06 03:39:53] 2025-06-06 01:36:02,128 | INFO     | nevents: 400
[2025-06-06 03:39:53] 2025-06-06 01:36:02,128 | INFO     | neventsw: 0
[2025-06-06 03:39:53] 2025-06-06 01:36:02,128 | INFO     | pid: 21005
[2025-06-06 03:39:53] 2025-06-06 01:36:02,128 | INFO     | pgrp: 21005
[2025-06-06 03:39:53] 2025-06-06 01:36:02,128 | INFO     | corecount: 8
[2025-06-06 03:39:53] 2025-06-06 01:36:02,128 | INFO     | event service: False
[2025-06-06 03:39:53] 2025-06-06 01:36:02,128 | INFO     | sizes: {0: 2397166, 1: 2397421, 12: 2397421, 23: 2397449, 34: 2397477, 44: 2397505, 55: 2397661, 66: 2397689, 77: 2397717, 87: 2397773, 95: 2398007, 98: 2398315, 1
[2025-06-06 03:39:53] 2025-06-06 01:36:02,128 | INFO     | --------------------------------------------------
[2025-06-06 03:39:53] 2025-06-06 01:36:02,128 | INFO     | 
[2025-06-06 03:39:53] 2025-06-06 01:36:02,129 | INFO     | executing command: ls -lF /var/lib/boinc/slots/31
[2025-06-06 03:39:53] 2025-06-06 01:36:02,440 | INFO     | PID=14399 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-06 03:39:53] 2025-06-06 01:36:02,441 | INFO     | .. there are 9 such processes running
[2025-06-06 03:39:53] 2025-06-06 01:36:02,825 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 03:39:53] 2025-06-06 01:36:02,825 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 03:39:53] 2025-06-06 01:36:02,825 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 03:39:53] 2025-06-06 01:36:02,825 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 03:39:53] 2025-06-06 01:36:02,825 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 03:39:53] 2025-06-06 01:36:02,825 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 03:39:53] 2025-06-06 01:36:02,825 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 03:39:53] 2025-06-06 01:36:02,826 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 03:39:53] 2025-06-06 01:36:02,826 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 03:39:53] 2025-06-06 01:36:02,826 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 03:39:53] 2025-06-06 01:36:02,826 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 03:39:53] 2025-06-06 01:36:02,826 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 03:39:53] 2025-06-06 01:36:02,826 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 03:39:53] 2025-06-06 01:36:02,826 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 03:39:53] 2025-06-06 01:36:02,826 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 03:39:53] 2025-06-06 01:36:02,826 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 03:39:53] 2025-06-06 01:36:02,826 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 03:39:53] 2025-06-06 01:36:02,826 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 03:39:53] 2025-06-06 01:36:02,827 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 03:39:53] 2025-06-06 01:36:02,827 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 03:39:53] 2025-06-06 01:36:02,827 | INFO     | job 6668327229 has completed (purged errors)
[2025-06-06 03:39:53] 2025-06-06 01:36:02,827 | INFO     | overall cleanup function is called
[2025-06-06 03:39:53] 2025-06-06 01:36:03,441 | INFO     | 19226s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-06 03:39:53] 2025-06-06 01:36:03,836 | INFO     | --- collectZombieJob: --- 10, [21005]
[2025-06-06 03:39:53] 2025-06-06 01:36:03,837 | INFO     | zombie collector waiting for pid 21005
[2025-06-06 03:39:53] 2025-06-06 01:36:03,837 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 03:39:53] 2025-06-06 01:36:03,837 | INFO     | collected zombie processes
[2025-06-06 03:39:53] 2025-06-06 01:36:03,837 | INFO     | will attempt to kill all subprocesses of pid=21005
[2025-06-06 03:39:53] 2025-06-06 01:36:03,942 | INFO     | process IDs to be killed: [21005] (in reverse order)
[2025-06-06 03:39:53] 2025-06-06 01:36:04,298 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 03:39:53] 2025-06-06 01:36:04,298 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 03:39:53] 2025-06-06 01:36:04,302 | INFO     | did not find any defunct processes belonging to 21005
[2025-06-06 03:39:53] 2025-06-06 01:36:04,306 | INFO     | did not find any defunct processes belonging to 21005
[2025-06-06 03:39:53] 2025-06-06 01:36:04,306 | INFO     | ready for new job
[2025-06-06 03:39:53] 2025-06-06 01:36:04,307 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 03:39:53] 2025-06-06 01:36:04,309 | INFO     | **************************************
[2025-06-06 03:39:53] 2025-06-06 01:36:04,309 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 03:39:53] 2025-06-06 01:36:04,310 | INFO     | **************************************
[2025-06-06 03:39:53] 2025-06-06 01:36:04,310 | INFO     | 
[2025-06-06 03:39:53] 2025-06-06 01:36:04,310 | INFO     | pilot is running in a VM
[2025-06-06 03:39:53] 2025-06-06 01:36:04,310 | INFO     | architecture information:
[2025-06-06 03:39:53] 2025-06-06 01:36:04,320 | INFO     | executing command: cat /etc/os-release
[2025-06-06 03:39:53] 2025-06-06 01:36:04,504 | INFO     | cat /etc/os-release:
[2025-06-06 03:39:53] NAME="CentOS Linux"
[2025-06-06 03:39:53] VERSION="7 (Core)"
[2025-06-06 03:39:53] ID="centos"
[2025-06-06 03:39:53] ID_LIKE="rhel fedora"
[2025-06-06 03:39:53] VERSION_ID="7"
[2025-06-06 03:39:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 03:39:53] ANSI_COLOR="0;31"
[2025-06-06 03:39:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 03:39:53] HOME_URL="https://www.centos.org/"
[2025-06-06 03:39:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 03:39:53] 
[2025-06-06 03:39:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 03:39:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 03:39:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 03:39:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 03:39:53] 
[2025-06-06 03:39:53] 2025-06-06 01:36:04,504 | INFO     | **************************************
[2025-06-06 03:39:53] 2025-06-06 01:36:05,007 | INFO     | executing command: df -mP /var/lib/boinc/slots/31
[2025-06-06 03:39:53] 2025-06-06 01:36:05,281 | INFO     | sufficient remaining disk space (497004052480 B)
[2025-06-06 03:39:53] 2025-06-06 01:36:05,282 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 03:39:53] 2025-06-06 01:36:05,282 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 03:39:53] 2025-06-06 01:36:05,282 | INFO     | update_server=False
[2025-06-06 03:39:53] 2025-06-06 01:36:05,282 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 03:39:53] 2025-06-06 01:36:05,287 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 03:39:53] 2025-06-06 01:36:05,288 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 03:39:53] 2025-06-06 01:36:05,288 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 03:39:53] 2025-06-06 01:36:05,288 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 03:39:53] 2025-06-06 01:36:05,309 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 03:39:53] 2025-06-06 01:36:05,424 | INFO     | all data control threads have been joined
[2025-06-06 03:39:53] 2025-06-06 01:36:06,037 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:39:53] 2025-06-06 01:36:06,038 | INFO     | aborting loop
[2025-06-06 03:39:53] 2025-06-06 01:36:06,156 | INFO     | all job control threads have been joined
[2025-06-06 03:39:53] 2025-06-06 01:36:06,288 | INFO     | [job] retrieve thread has finished
[2025-06-06 03:39:53] 2025-06-06 01:36:06,431 | INFO     | [data] control thread has finished
[2025-06-06 03:39:53] 2025-06-06 01:36:06,512 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 03:39:53] 2025-06-06 01:36:06,528 | INFO     | [payload] failed_post thread has finished
[2025-06-06 03:39:53] 2025-06-06 01:36:06,566 | INFO     | all payload control threads have been joined
[2025-06-06 03:39:53] 2025-06-06 01:36:06,588 | INFO     | [job] validate thread has finished
[2025-06-06 03:39:53] 2025-06-06 01:36:07,042 | INFO     | [job] job monitor thread has finished
[2025-06-06 03:39:53] 2025-06-06 01:36:07,141 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:39:53] 2025-06-06 01:36:07,162 | INFO     | [job] control thread has finished
[2025-06-06 03:39:53] 2025-06-06 01:36:07,195 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 03:39:53] 2025-06-06 01:36:07,241 | INFO     | [data] copytool_in thread has finished
[2025-06-06 03:39:53] 2025-06-06 01:36:07,300 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 03:39:53] 2025-06-06 01:36:07,316 | INFO     | [data] copytool_out thread has finished
[2025-06-06 03:39:53] 2025-06-06 01:36:07,572 | INFO     | [payload] control thread has finished
[2025-06-06 03:39:53] 2025-06-06 01:36:07,662 | INFO     | [payload] validate_post thread has finished
[2025-06-06 03:39:53] 2025-06-06 01:36:07,698 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 03:39:53] 2025-06-06 01:36:08,147 | INFO     | [job] queue monitor thread has finished
[2025-06-06 03:39:53] 2025-06-06 01:36:08,398 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 03:39:53] 2025-06-06 01:36:12,408 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 03:39:53] 2025-06-06 01:36:12,506 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140411716409152)>', '<ExcThread(monitor, started 140410978551552)>']
[2025-06-06 03:39:53] 2025-06-06 01:36:13,339 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 03:39:53] 2025-06-06 01:36:13,340 | INFO     | [monitor] control thread has ended
[2025-06-06 03:39:53] 2025-06-06 01:36:17,532 | INFO     | all workflow threads have been joined
[2025-06-06 03:39:53] 2025-06-06 01:36:17,533 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 03:39:53] 2025-06-06 01:36:17,533 | INFO     | traces error code: 0
[2025-06-06 03:39:53] 2025-06-06 01:36:17,533 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 03:39:53] 2025-06-06 01:36:17,858 [wrapper] ==== pilot stdout END ====
[2025-06-06 03:39:53] 2025-06-06 01:36:17,966 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 03:39:53] 2025-06-06 01:36:18,079 [wrapper] pilotpid: 14399
[2025-06-06 03:39:53] 2025-06-06 01:36:18,214 [wrapper] Pilot exit status: 0
[2025-06-06 03:39:53] 2025-06-06 01:36:18,591 [wrapper] pandaids: 6668327229
[2025-06-06 03:39:53] 2025-06-06 01:36:18,960 [wrapper] cleanup supervisor_pilot 24895 14400
[2025-06-06 03:39:53] 2025-06-06 01:36:19,002 [wrapper] Test setup, not cleaning
[2025-06-06 03:39:53] 2025-06-06 01:36:19,049 [wrapper] apfmon messages muted
[2025-06-06 03:39:53] 2025-06-06 01:36:19,111 [wrapper] ==== wrapper stdout END ====
[2025-06-06 03:39:53] 2025-06-06 01:36:19,205 [wrapper] ==== wrapper stderr END ====
[2025-06-06 03:39:53]  *** Error codes and diagnostics ***
[2025-06-06 03:39:53]     "exeErrorCode": 0,
[2025-06-06 03:39:53]     "exeErrorDiag": "",
[2025-06-06 03:39:53]     "pilotErrorCode": 0,
[2025-06-06 03:39:53]     "pilotErrorDiag": "",
[2025-06-06 03:39:53]  *** Listing of results directory ***
[2025-06-06 03:39:53] total 425560
[2025-06-06 03:39:53] -rw-r--r--. 1 boinc boinc    495897 May 28 12:54 pilot3.tar.gz
[2025-06-06 03:39:53] -rwx------. 1 boinc boinc     37140 May 28 13:01 runpilot2-wrapper.sh
[2025-06-06 03:39:53] -rw-r--r--. 1 boinc boinc      5111 May 28 13:01 queuedata.json
[2025-06-06 03:39:53] -rw-r--r--. 1 boinc boinc       100 Jun  5 22:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 03:39:53] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 22:12 run_atlas
[2025-06-06 03:39:53] -rw-r--r--. 1 boinc boinc       105 Jun  5 22:12 job.xml
[2025-06-06 03:39:53] -rw-r--r--. 2 boinc boinc 225922919 Jun  5 22:12 EVNT.44871834._003252.pool.root.1
[2025-06-06 03:39:53] -rw-r--r--. 1 boinc boinc      6393 Jun  5 22:12 init_data.xml
[2025-06-06 03:39:53] -rw-r--r--. 2 boinc boinc     15093 Jun  5 22:12 start_atlas.sh
[2025-06-06 03:39:53] drwxrwx--x. 2 boinc boinc        68 Jun  5 22:12 shared
[2025-06-06 03:39:53] -rw-r--r--. 2 boinc boinc    508871 Jun  5 22:12 input.tar.gz
[2025-06-06 03:39:53] -rw-r--r--. 1 boinc boinc         0 Jun  5 22:12 boinc_lockfile
[2025-06-06 03:39:53] -rw-r--r--. 1 boinc boinc      2559 Jun  5 22:12 pandaJob.out
[2025-06-06 03:39:53] -rw-------. 1 boinc boinc    987599 Jun  5 22:15 agis_schedconf.cvmfs.json
[2025-06-06 03:39:53] drwx------. 4 boinc boinc      4096 Jun  5 22:15 pilot3
[2025-06-06 03:39:53] -rw-------. 1 boinc boinc 201904689 Jun  6 03:33 HITS.44871837._083317.pool.root.1
[2025-06-06 03:39:53] -rw-r--r--. 1 boinc boinc       531 Jun  6 03:33 boinc_task_state.xml
[2025-06-06 03:39:53] -rw-------. 1 boinc boinc      1014 Jun  6 03:34 memory_monitor_summary.json
[2025-06-06 03:39:53] -rw-------. 1 boinc boinc   1598969 Jun  6 03:34 agis_ddmendpoints.agis.ALL.json
[2025-06-06 03:39:53] -rw-------. 1 boinc boinc    433387 Jun  6 03:34 log.44871837._083317.job.log.tgz.1
[2025-06-06 03:39:53] -rw-------. 1 boinc boinc        95 Jun  6 03:35 pilot_heartbeat.json
[2025-06-06 03:39:53] -rw-------. 1 boinc boinc      7687 Jun  6 03:36 heartbeat.json
[2025-06-06 03:39:53] -rw-------. 1 boinc boinc      4540 Jun  6 03:36 pilotlog.txt
[2025-06-06 03:39:53] -rw-------. 1 boinc boinc   1629297 Jun  6 03:36 log.44871837._083317.job.log.1
[2025-06-06 03:39:53] -rw-------. 1 boinc boinc       357 Jun  6 03:36 output.list
[2025-06-06 03:39:53] -rw-r--r--. 1 boinc boinc       620 Jun  6 03:36 runtime_log
[2025-06-06 03:39:53] -rw-------. 1 boinc boinc   2078720 Jun  6 03:36 result.tar.gz
[2025-06-06 03:39:53] -rw-------. 1 boinc boinc       657 Jun  6 03:36 y61KDm8hTe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmizbKDmtMh5pm.diag
[2025-06-06 03:39:53] -rw-r--r--. 1 boinc boinc      8673 Jun  6 03:36 runtime_log.err
[2025-06-06 03:39:53] -rw-r--r--. 1 boinc boinc      8192 Jun  6 03:39 boinc_mmap_file
[2025-06-06 03:39:53] -rw-r--r--. 1 boinc boinc        28 Jun  6 03:39 wrapper_checkpoint.txt
[2025-06-06 03:39:53] -rw-r--r--. 1 boinc boinc     20644 Jun  6 03:39 stderr.txt
[2025-06-06 03:39:53] HITS file was successfully produced:
[2025-06-06 03:39:53] -rw-------. 1 boinc boinc 201904689 Jun  6 03:33 shared/HITS.pool.root.1
[2025-06-06 03:39:53]  *** Contents of shared directory: ***
[2025-06-06 03:39:53] total 420352
[2025-06-06 03:39:53] -rw-r--r--. 2 boinc boinc 225922919 Jun  5 22:12 ATLAS.root_0
[2025-06-06 03:39:53] -rw-r--r--. 2 boinc boinc     15093 Jun  5 22:12 start_atlas.sh
[2025-06-06 03:39:53] -rw-r--r--. 2 boinc boinc    508871 Jun  5 22:12 input.tar.gz
[2025-06-06 03:39:53] -rw-------. 1 boinc boinc 201904689 Jun  6 03:33 HITS.pool.root.1
[2025-06-06 03:39:53] -rw-------. 1 boinc boinc   2078720 Jun  6 03:36 result.tar.gz
03:39:55 (6792): run_atlas exited; CPU time 71157.565062
03:39:55 (6792): called boinc_finish(0)

</stderr_txt>
]]>

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