Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:40:33 (29772): wrapper (7.7.26015): starting
21:40:33 (29772): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 21:40:33] Arguments: --nthreads 8
[2025-06-05 21:40:33] Threads: 8
[2025-06-05 21:40:33] Checking for CVMFS
[2025-06-05 21:40:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 21:40:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 21:40:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 21:40:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 21:40:35] 2.11.2.0 361 35105 93008 146830 2 16 20629067 25165824 3907 130560 0 17499453 99.800 20678983 2383 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 21:40:35] CVMFS is ok
[2025-06-05 21:40:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 21:40:35] Checking for apptainer binary...
[2025-06-05 21:40:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 21:40:35] Running /usr/bin/apptainer --version
[2025-06-05 21:40:35] apptainer version 1.3.2-1.el7
[2025-06-05 21:40:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 21:40:46] cg-vwn321.simple-grid.lan
[2025-06-05 21:40:46] apptainer works
[2025-06-05 21:40:46] Set ATHENA_PROC_NUMBER=8
[2025-06-05 21:40:46] Set ATHENA_CORE_NUMBER=8
[2025-06-05 21:40:46] Starting ATLAS job with PandaID=6668533016
[2025-06-05 21:40:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 03:19:59]  *** The last 200 lines of the pilot log: ***
[2025-06-06 03:19:59] 2025-06-06 00:50:40,771 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 03:19:59] 2025-06-06 00:50:40,771 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 03:19:59] 2025-06-06 00:50:40,771 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 03:19:59] 2025-06-06 00:50:40,778 | INFO     | fitting pss+swap vs Time
[2025-06-06 03:19:59] 2025-06-06 00:50:40,779 | INFO     | sum of square deviations: 7720081493.0
[2025-06-06 03:19:59] 2025-06-06 00:50:40,782 | INFO     | sum of deviations: 113527443582.5
[2025-06-06 03:19:59] 2025-06-06 00:50:40,783 | INFO     | mean x: 1749162027.5
[2025-06-06 03:19:59] 2025-06-06 00:50:40,783 | INFO     | mean y: 2449064.229452055
[2025-06-06 03:19:59] 2025-06-06 00:50:40,783 | INFO     | -- intersect: -25719804460.388565
[2025-06-06 03:19:59] 2025-06-06 00:50:40,783 | INFO     | intersect: -25719804460.388565
[2025-06-06 03:19:59] 2025-06-06 00:50:40,784 | INFO     | chi2: 6.361278117996916
[2025-06-06 03:19:59] 2025-06-06 00:50:40,784 | INFO     | sum of square deviations: 7330250928.0
[2025-06-06 03:19:59] 2025-06-06 00:50:40,787 | INFO     | sum of deviations: 130670626254.00003
[2025-06-06 03:19:59] 2025-06-06 00:50:40,788 | INFO     | mean x: 1749161875.0
[2025-06-06 03:19:59] 2025-06-06 00:50:40,788 | INFO     | mean y: 2455665.275261324
[2025-06-06 03:19:59] 2025-06-06 00:50:40,788 | INFO     | -- intersect: -31178479321.93026
[2025-06-06 03:19:59] 2025-06-06 00:50:40,788 | INFO     | intersect: -31178479321.93026
[2025-06-06 03:19:59] 2025-06-06 00:50:40,788 | INFO     | chi2: 5.632470178186698
[2025-06-06 03:19:59] 2025-06-06 00:50:40,788 | INFO     | current chi2=5.632470178186698 (change=11.456941927257065 %)
[2025-06-06 03:19:59] 2025-06-06 00:50:40,789 | INFO     | right removable region: 286
[2025-06-06 03:19:59] 2025-06-06 00:50:40,789 | INFO     | sum of square deviations: 7330250928.0
[2025-06-06 03:19:59] 2025-06-06 00:50:40,795 | INFO     | sum of deviations: 12032680355.000004
[2025-06-06 03:19:59] 2025-06-06 00:50:40,796 | INFO     | mean x: 1749162180.0
[2025-06-06 03:19:59] 2025-06-06 00:50:40,796 | INFO     | mean y: 2488741.487804878
[2025-06-06 03:19:59] 2025-06-06 00:50:40,796 | INFO     | -- intersect: -2868778505.3944945
[2025-06-06 03:19:59] 2025-06-06 00:50:40,796 | INFO     | intersect: -2868778505.3944945
[2025-06-06 03:19:59] 2025-06-06 00:50:40,797 | INFO     | chi2: 1.6840601969618145
[2025-06-06 03:19:59] 2025-06-06 00:50:40,797 | INFO     | current chi2=1.6840601969618145 (change=73.52638627452272 %)
[2025-06-06 03:19:59] 2025-06-06 00:50:40,797 | INFO     | sum of square deviations: 6953769450.5
[2025-06-06 03:19:59] 2025-06-06 00:50:40,800 | INFO     | sum of deviations: -23407497303.999996
[2025-06-06 03:19:59] 2025-06-06 00:50:40,801 | INFO     | mean x: 1749162332.5
[2025-06-06 03:19:59] 2025-06-06 00:50:40,801 | INFO     | mean y: 2503003.744680851
[2025-06-06 03:19:59] 2025-06-06 00:50:40,801 | INFO     | -- intersect: 5890462458.498837
[2025-06-06 03:19:59] 2025-06-06 00:50:40,801 | INFO     | intersect: 5890462458.498837
[2025-06-06 03:19:59] 2025-06-06 00:50:40,801 | INFO     | chi2: 0.8850592895199874
[2025-06-06 03:19:59] 2025-06-06 00:50:40,802 | INFO     | current chi2=0.8850592895199874 (change=47.44491372002567 %)
[2025-06-06 03:19:59] 2025-06-06 00:50:40,802 | INFO     | sum of square deviations: 6590404498.0
[2025-06-06 03:19:59] 2025-06-06 00:50:40,805 | INFO     | sum of deviations: -17326099071.0
[2025-06-06 03:19:59] 2025-06-06 00:50:40,805 | INFO     | mean x: 1749162485.0
[2025-06-06 03:19:59] 2025-06-06 00:50:40,805 | INFO     | mean y: 2500434.119133574
[2025-06-06 03:19:59] 2025-06-06 00:50:40,805 | INFO     | -- intersect: 4601028872.788355
[2025-06-06 03:19:59] 2025-06-06 00:50:40,806 | INFO     | intersect: 4601028872.788355
[2025-06-06 03:19:59] 2025-06-06 00:50:40,806 | INFO     | chi2: 0.8613397136786944
[2025-06-06 03:19:59] 2025-06-06 00:50:40,806 | INFO     | current chi2=0.8613397136786944 (change=2.679998517857176 %)
[2025-06-06 03:19:59] 2025-06-06 00:50:40,806 | INFO     | left removable region: 30
[2025-06-06 03:19:59] 2025-06-06 00:50:40,807 | INFO     | sum of square deviations: 5202255680.0
[2025-06-06 03:19:59] 2025-06-06 00:50:40,809 | INFO     | sum of deviations: 12769590580.5
[2025-06-06 03:19:59] 2025-06-06 00:50:40,810 | INFO     | mean x: 1749162759.5
[2025-06-06 03:19:59] 2025-06-06 00:50:40,810 | INFO     | mean y: 2503017.21484375
[2025-06-06 03:19:59] 2025-06-06 00:50:40,810 | INFO     | -- intersect: -4291036876.132457
[2025-06-06 03:19:59] 2025-06-06 00:50:40,810 | INFO     | intersect: -4291036876.132457
[2025-06-06 03:19:59] 2025-06-06 00:50:40,810 | INFO     | chi2: 0.0008120254663096088
[2025-06-06 03:19:59] 2025-06-06 00:50:40,811 | INFO     | -- intersect: -4291036876.132457
[2025-06-06 03:19:59] 2025-06-06 00:50:40,811 | INFO     | current memory leak: 2.45 B/s (using 256 data points, chi2=0.00)
[2025-06-06 03:19:59] 2025-06-06 00:50:40,812 | INFO     | ..............................
[2025-06-06 03:19:59] 2025-06-06 00:50:40,812 | INFO     | . Timing measurements:
[2025-06-06 03:19:59] 2025-06-06 00:50:40,812 | INFO     | . get job = 0 s
[2025-06-06 03:19:59] 2025-06-06 00:50:40,812 | INFO     | . initial setup = 7 s
[2025-06-06 03:19:59] 2025-06-06 00:50:40,813 | INFO     | . payload setup = 184 s
[2025-06-06 03:19:59] 2025-06-06 00:50:40,813 | INFO     | . stage-in = 0 s
[2025-06-06 03:19:59] 2025-06-06 00:50:40,813 | INFO     | . payload execution = 17952 s
[2025-06-06 03:19:59] 2025-06-06 00:50:40,813 | INFO     | . stage-out = 3 s
[2025-06-06 03:19:59] 2025-06-06 00:50:40,813 | INFO     | . log creation = 1 s
[2025-06-06 03:19:59] 2025-06-06 00:50:40,813 | INFO     | ..............................
[2025-06-06 03:19:59] 2025-06-06 00:50:40,955 | INFO     | 
[2025-06-06 03:19:59] 2025-06-06 00:50:40,955 | INFO     | job summary report
[2025-06-06 03:19:59] 2025-06-06 00:50:40,955 | INFO     | --------------------------------------------------
[2025-06-06 03:19:59] 2025-06-06 00:50:40,955 | INFO     | PanDA job id: 6668533016
[2025-06-06 03:19:59] 2025-06-06 00:50:40,955 | INFO     | task id: 44871837
[2025-06-06 03:19:59] 2025-06-06 00:50:40,956 | INFO     | errors: (none)
[2025-06-06 03:19:59] 2025-06-06 00:50:40,956 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 03:19:59] 2025-06-06 00:50:40,956 | INFO     | pilot state: finished 
[2025-06-06 03:19:59] 2025-06-06 00:50:40,956 | INFO     | transexitcode: 0
[2025-06-06 03:19:59] 2025-06-06 00:50:40,956 | INFO     | exeerrorcode: 0
[2025-06-06 03:19:59] 2025-06-06 00:50:40,956 | INFO     | exeerrordiag: 
[2025-06-06 03:19:59] 2025-06-06 00:50:40,956 | INFO     | exitcode: 0
[2025-06-06 03:19:59] 2025-06-06 00:50:40,956 | INFO     | exitmsg: OK
[2025-06-06 03:19:59] 2025-06-06 00:50:40,956 | INFO     | cpuconsumptiontime: 67787 s
[2025-06-06 03:19:59] 2025-06-06 00:50:40,956 | INFO     | nevents: 400
[2025-06-06 03:19:59] 2025-06-06 00:50:40,956 | INFO     | neventsw: 0
[2025-06-06 03:19:59] 2025-06-06 00:50:40,957 | INFO     | pid: 12678
[2025-06-06 03:19:59] 2025-06-06 00:50:40,957 | INFO     | pgrp: 12678
[2025-06-06 03:19:59] 2025-06-06 00:50:40,957 | INFO     | corecount: 8
[2025-06-06 03:19:59] 2025-06-06 00:50:40,957 | INFO     | event service: False
[2025-06-06 03:19:59] 2025-06-06 00:50:40,957 | INFO     | sizes: {0: 2396564, 1: 2397249, 2: 2397448, 13: 2397448, 23: 2397504, 34: 2397532, 45: 2397688, 56: 2397716, 66: 2397744, 77: 2397772, 83: 2398034, 88: 2398370, 18
[2025-06-06 03:19:59] 2025-06-06 00:50:40,957 | INFO     | --------------------------------------------------
[2025-06-06 03:19:59] 2025-06-06 00:50:40,957 | INFO     | 
[2025-06-06 03:19:59] 2025-06-06 00:50:40,957 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-06 03:19:59] 2025-06-06 00:50:41,409 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 03:19:59] 2025-06-06 00:50:41,410 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 03:19:59] 2025-06-06 00:50:41,410 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 03:19:59] 2025-06-06 00:50:41,410 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 03:19:59] 2025-06-06 00:50:41,410 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 03:19:59] 2025-06-06 00:50:41,410 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 03:19:59] 2025-06-06 00:50:41,410 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 03:19:59] 2025-06-06 00:50:41,410 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 03:19:59] 2025-06-06 00:50:41,410 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 03:19:59] 2025-06-06 00:50:41,411 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 03:19:59] 2025-06-06 00:50:41,411 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 03:19:59] 2025-06-06 00:50:41,411 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 03:19:59] 2025-06-06 00:50:41,411 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 03:19:59] 2025-06-06 00:50:41,411 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 03:19:59] 2025-06-06 00:50:41,411 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 03:19:59] 2025-06-06 00:50:41,411 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 03:19:59] 2025-06-06 00:50:41,411 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 03:19:59] 2025-06-06 00:50:41,411 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 03:19:59] 2025-06-06 00:50:41,411 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 03:19:59] 2025-06-06 00:50:41,412 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 03:19:59] 2025-06-06 00:50:41,412 | INFO     | job 6668533016 has completed (purged errors)
[2025-06-06 03:19:59] 2025-06-06 00:50:41,412 | INFO     | overall cleanup function is called
[2025-06-06 03:19:59] 2025-06-06 00:50:42,421 | INFO     | --- collectZombieJob: --- 10, [12678]
[2025-06-06 03:19:59] 2025-06-06 00:50:42,421 | INFO     | zombie collector waiting for pid 12678
[2025-06-06 03:19:59] 2025-06-06 00:50:42,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 03:19:59] 2025-06-06 00:50:42,422 | INFO     | collected zombie processes
[2025-06-06 03:19:59] 2025-06-06 00:50:42,422 | INFO     | will attempt to kill all subprocesses of pid=12678
[2025-06-06 03:19:59] 2025-06-06 00:50:42,568 | INFO     | process IDs to be killed: [12678] (in reverse order)
[2025-06-06 03:19:59] 2025-06-06 00:50:43,431 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 03:19:59] 2025-06-06 00:50:43,431 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 03:19:59] 2025-06-06 00:50:43,435 | INFO     | did not find any defunct processes belonging to 12678
[2025-06-06 03:19:59] 2025-06-06 00:50:43,438 | INFO     | did not find any defunct processes belonging to 12678
[2025-06-06 03:19:59] 2025-06-06 00:50:43,439 | INFO     | ready for new job
[2025-06-06 03:19:59] 2025-06-06 00:50:43,439 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 03:19:59] 2025-06-06 00:50:43,442 | INFO     | **************************************
[2025-06-06 03:19:59] 2025-06-06 00:50:43,442 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 03:19:59] 2025-06-06 00:50:43,442 | INFO     | **************************************
[2025-06-06 03:19:59] 2025-06-06 00:50:43,442 | INFO     | 
[2025-06-06 03:19:59] 2025-06-06 00:50:43,443 | INFO     | pilot is running in a VM
[2025-06-06 03:19:59] 2025-06-06 00:50:43,443 | INFO     | architecture information:
[2025-06-06 03:19:59] 2025-06-06 00:50:43,450 | INFO     | executing command: cat /etc/os-release
[2025-06-06 03:19:59] 2025-06-06 00:50:43,679 | INFO     | cat /etc/os-release:
[2025-06-06 03:19:59] NAME="CentOS Linux"
[2025-06-06 03:19:59] VERSION="7 (Core)"
[2025-06-06 03:19:59] ID="centos"
[2025-06-06 03:19:59] ID_LIKE="rhel fedora"
[2025-06-06 03:19:59] VERSION_ID="7"
[2025-06-06 03:19:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 03:19:59] ANSI_COLOR="0;31"
[2025-06-06 03:19:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 03:19:59] HOME_URL="https://www.centos.org/"
[2025-06-06 03:19:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 03:19:59] 
[2025-06-06 03:19:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 03:19:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 03:19:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 03:19:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 03:19:59] 
[2025-06-06 03:19:59] 2025-06-06 00:50:43,679 | INFO     | **************************************
[2025-06-06 03:19:59] 2025-06-06 00:50:44,183 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-06 03:19:59] 2025-06-06 00:50:44,411 | INFO     | sufficient remaining disk space (496698916864 B)
[2025-06-06 03:19:59] 2025-06-06 00:50:44,411 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 03:19:59] 2025-06-06 00:50:44,411 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 03:19:59] 2025-06-06 00:50:44,411 | INFO     | update_server=False
[2025-06-06 03:19:59] 2025-06-06 00:50:44,411 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 03:19:59] 2025-06-06 00:50:44,414 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 03:19:59] 2025-06-06 00:50:44,414 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 03:19:59] 2025-06-06 00:50:44,414 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 03:19:59] 2025-06-06 00:50:44,415 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 03:19:59] 2025-06-06 00:50:44,694 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 03:19:59] 2025-06-06 00:50:44,840 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 03:19:59] 2025-06-06 00:50:44,840 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 03:19:59] 2025-06-06 00:50:44,840 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:19:59] 2025-06-06 00:50:44,841 | INFO     | will abort loop
[2025-06-06 03:19:59] 2025-06-06 00:50:45,417 | INFO     | [job] retrieve thread has finished
[2025-06-06 03:19:59] 2025-06-06 00:50:45,436 | INFO     | all data control threads have been joined
[2025-06-06 03:19:59] 2025-06-06 00:50:45,463 | INFO     | all payload control threads have been joined
[2025-06-06 03:19:59] 2025-06-06 00:50:45,498 | INFO     | all job control threads have been joined
[2025-06-06 03:19:59] 2025-06-06 00:50:45,842 | INFO     | [payload] failed_post thread has finished
[2025-06-06 03:19:59] 2025-06-06 00:50:45,847 | INFO     | [job] job monitor thread has finished
[2025-06-06 03:19:59] 2025-06-06 00:50:45,970 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:19:59] 2025-06-06 00:50:46,085 | INFO     | [job] validate thread has finished
[2025-06-06 03:19:59] 2025-06-06 00:50:46,276 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 03:19:59] 2025-06-06 00:50:46,442 | INFO     | [data] control thread has finished
[2025-06-06 03:19:59] 2025-06-06 00:50:46,469 | INFO     | [payload] control thread has finished
[2025-06-06 03:19:59] 2025-06-06 00:50:46,494 | INFO     | [payload] validate_post thread has finished
[2025-06-06 03:19:59] 2025-06-06 00:50:46,504 | INFO     | [job] control thread has finished
[2025-06-06 03:19:59] 2025-06-06 00:50:46,548 | INFO     | [data] copytool_in thread has finished
[2025-06-06 03:19:59] 2025-06-06 00:50:46,701 | INFO     | [data] copytool_out thread has finished
[2025-06-06 03:19:59] 2025-06-06 00:50:46,733 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 03:19:59] 2025-06-06 00:50:46,772 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 03:19:59] 2025-06-06 00:50:46,789 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 03:19:59] 2025-06-06 00:50:46,976 | INFO     | [job] queue monitor thread has finished
[2025-06-06 03:19:59] 2025-06-06 00:50:47,833 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 03:19:59] 2025-06-06 00:50:51,842 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 03:19:59] 2025-06-06 00:50:53,889 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140672274839360)>', '<ExcThread(monitor, started 140671822313216)>']
[2025-06-06 03:19:59] 2025-06-06 00:50:54,473 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 03:19:59] 2025-06-06 00:50:54,473 | INFO     | [monitor] control thread has ended
[2025-06-06 03:19:59] 2025-06-06 00:50:58,915 | INFO     | all workflow threads have been joined
[2025-06-06 03:19:59] 2025-06-06 00:50:58,915 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 03:19:59] 2025-06-06 00:50:58,915 | INFO     | traces error code: 0
[2025-06-06 03:19:59] 2025-06-06 00:50:58,916 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 03:19:59] 2025-06-06 00:50:59,354 [wrapper] ==== pilot stdout END ====
[2025-06-06 03:19:59] 2025-06-06 00:50:59,474 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 03:19:59] 2025-06-06 00:50:59,567 [wrapper] pilotpid: 4060
[2025-06-06 03:19:59] 2025-06-06 00:50:59,641 [wrapper] Pilot exit status: 0
[2025-06-06 03:19:59] 2025-06-06 00:50:59,976 [wrapper] pandaids: 6668533016
[2025-06-06 03:19:59] 2025-06-06 00:51:00,860 [wrapper] cleanup supervisor_pilot  4660 4061
[2025-06-06 03:19:59] 2025-06-06 00:51:00,967 [wrapper] Test setup, not cleaning
[2025-06-06 03:19:59] 2025-06-06 00:51:01,059 [wrapper] apfmon messages muted
[2025-06-06 03:19:59] 2025-06-06 00:51:01,159 [wrapper] ==== wrapper stdout END ====
[2025-06-06 03:19:59] 2025-06-06 00:51:01,255 [wrapper] ==== wrapper stderr END ====
[2025-06-06 03:19:59]  *** Error codes and diagnostics ***
[2025-06-06 03:19:59]     "exeErrorCode": 0,
[2025-06-06 03:19:59]     "exeErrorDiag": "",
[2025-06-06 03:19:59]     "pilotErrorCode": 0,
[2025-06-06 03:19:59]     "pilotErrorDiag": "",
[2025-06-06 03:19:59]  *** Listing of results directory ***
[2025-06-06 03:19:59] total 415828
[2025-06-06 03:19:59] -rw-r--r--. 1 boinc boinc    495897 May 28 16:07 pilot3.tar.gz
[2025-06-06 03:19:59] -rw-r--r--. 1 boinc boinc      5111 May 28 16:45 queuedata.json
[2025-06-06 03:19:59] -rwx------. 1 boinc boinc     37140 May 28 16:45 runpilot2-wrapper.sh
[2025-06-06 03:19:59] -rw-r--r--. 1 boinc boinc       100 Jun  5 21:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 03:19:59] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 21:40 run_atlas
[2025-06-06 03:19:59] -rw-r--r--. 1 boinc boinc       105 Jun  5 21:40 job.xml
[2025-06-06 03:19:59] -rw-r--r--. 1 boinc boinc      6391 Jun  5 21:40 init_data.xml
[2025-06-06 03:19:59] -rw-r--r--. 2 boinc boinc 225412336 Jun  5 21:40 EVNT.44871834._003350.pool.root.1
[2025-06-06 03:19:59] -rw-r--r--. 2 boinc boinc     15093 Jun  5 21:40 start_atlas.sh
[2025-06-06 03:19:59] drwxrwx--x. 2 boinc boinc        68 Jun  5 21:40 shared
[2025-06-06 03:19:59] -rw-r--r--. 2 boinc boinc    508884 Jun  5 21:40 input.tar.gz
[2025-06-06 03:19:59] -rw-r--r--. 1 boinc boinc         0 Jun  5 21:40 boinc_lockfile
[2025-06-06 03:19:59] -rw-r--r--. 1 boinc boinc      2559 Jun  5 21:40 pandaJob.out
[2025-06-06 03:19:59] -rw-------. 1 boinc boinc    987599 Jun  5 21:43 agis_schedconf.cvmfs.json
[2025-06-06 03:19:59] drwx------. 4 boinc boinc      4096 Jun  5 21:43 pilot3
[2025-06-06 03:19:59] -rw-------. 1 boinc boinc 192599026 Jun  6 02:47 HITS.44871837._085908.pool.root.1
[2025-06-06 03:19:59] -rw-r--r--. 1 boinc boinc       531 Jun  6 02:47 boinc_task_state.xml
[2025-06-06 03:19:59] -rw-------. 1 boinc boinc      1027 Jun  6 02:49 memory_monitor_summary.json
[2025-06-06 03:19:59] -rw-------. 1 boinc boinc   1598969 Jun  6 02:49 agis_ddmendpoints.agis.ALL.json
[2025-06-06 03:19:59] -rw-------. 1 boinc boinc    429747 Jun  6 02:49 log.44871837._085908.job.log.tgz.1
[2025-06-06 03:19:59] -rw-------. 1 boinc boinc        95 Jun  6 02:50 pilot_heartbeat.json
[2025-06-06 03:19:59] -rw-------. 1 boinc boinc      7685 Jun  6 02:50 heartbeat.json
[2025-06-06 03:19:59] -rw-------. 1 boinc boinc      4725 Jun  6 02:50 pilotlog.txt
[2025-06-06 03:19:59] -rw-------. 1 boinc boinc   1555280 Jun  6 02:51 log.44871837._085908.job.log.1
[2025-06-06 03:19:59] -rw-------. 1 boinc boinc       357 Jun  6 02:51 output.list
[2025-06-06 03:19:59] -rw-r--r--. 1 boinc boinc       620 Jun  6 02:51 runtime_log
[2025-06-06 03:19:59] -rw-------. 1 boinc boinc   2007040 Jun  6 02:51 result.tar.gz
[2025-06-06 03:19:59] -rw-------. 1 boinc boinc       657 Jun  6 02:51 VGMMDmJDXe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmzfTKDmfqoudm.diag
[2025-06-06 03:19:59] -rw-r--r--. 1 boinc boinc      8659 Jun  6 02:51 runtime_log.err
[2025-06-06 03:19:59] -rw-r--r--. 1 boinc boinc      8192 Jun  6 03:19 boinc_mmap_file
[2025-06-06 03:19:59] -rw-r--r--. 1 boinc boinc        28 Jun  6 03:19 wrapper_checkpoint.txt
[2025-06-06 03:19:59] -rw-r--r--. 1 boinc boinc     20528 Jun  6 03:19 stderr.txt
[2025-06-06 03:19:59] HITS file was successfully produced:
[2025-06-06 03:19:59] -rw-------. 1 boinc boinc 192599026 Jun  6 02:47 shared/HITS.pool.root.1
[2025-06-06 03:19:59]  *** Contents of shared directory: ***
[2025-06-06 03:19:59] total 410696
[2025-06-06 03:19:59] -rw-r--r--. 2 boinc boinc 225412336 Jun  5 21:40 ATLAS.root_0
[2025-06-06 03:19:59] -rw-r--r--. 2 boinc boinc     15093 Jun  5 21:40 start_atlas.sh
[2025-06-06 03:19:59] -rw-r--r--. 2 boinc boinc    508884 Jun  5 21:40 input.tar.gz
[2025-06-06 03:19:59] -rw-------. 1 boinc boinc 192599026 Jun  6 02:47 HITS.pool.root.1
[2025-06-06 03:19:59] -rw-------. 1 boinc boinc   2007040 Jun  6 02:51 result.tar.gz
03:20:01 (29772): run_atlas exited; CPU time 68025.798275
03:20:01 (29772): called boinc_finish(0)

</stderr_txt>
]]>

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