Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:16:07 (2137697): wrapper (7.7.26015): starting
15:16:07 (2137697): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 15:16:07] Arguments: --nthreads 8
[2025-06-05 15:16:07] Threads: 8
[2025-06-05 15:16:07] Checking for CVMFS
[2025-06-05 15:16:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 15:16:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 15:16:07] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 15:16:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 15:16:08] 2.12.6.0 5779 33254 477156 146768 -2293 1133 29681678 32935936 17377 16776704 3 93633592 99.647 90408564 10251 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 15:16:08] CVMFS is ok
[2025-06-05 15:16:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 15:16:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 15:16:08] Further information can be found at the LHC@home message board.
[2025-06-05 15:16:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 15:16:08] Checking for apptainer binary...
[2025-06-05 15:16:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 15:16:08] Running /usr/bin/apptainer --version
[2025-06-05 15:16:08] apptainer version 1.4.1-1.el9
[2025-06-05 15:16:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 15:16:08] c6-12-25-2.aglt2.org
[2025-06-05 15:16:08] apptainer works
[2025-06-05 15:16:08] Set ATHENA_PROC_NUMBER=8
[2025-06-05 15:16:08] Set ATHENA_CORE_NUMBER=8
[2025-06-05 15:16:08] Starting ATLAS job with PandaID=6668531210
[2025-06-05 15:16:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
15:49:28 (2262505): wrapper (7.7.26015): starting
15:49:28 (2262505): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 15:49:28] Arguments: --nthreads 8
[2025-06-05 15:49:28] Threads: 8
[2025-06-05 15:49:28] This job has been restarted, cleaning up previous attempt
[2025-06-05 15:49:28] Checking for CVMFS
[2025-06-05 15:49:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 15:49:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 15:49:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 15:49:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 15:49:29] 2.12.6.0 5779 33287 478000 146768 -2327 1133 29817919 32935936 15710 16776704 3 93805162 99.648 90439589 10251 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 15:49:29] CVMFS is ok
[2025-06-05 15:49:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 15:49:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 15:49:29] Further information can be found at the LHC@home message board.
[2025-06-05 15:49:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 15:49:29] Checking for apptainer binary...
[2025-06-05 15:49:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 15:49:29] Running /usr/bin/apptainer --version
[2025-06-05 15:49:29] apptainer version 1.4.1-1.el9
[2025-06-05 15:49:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 15:49:29] c6-12-25-2.aglt2.org
[2025-06-05 15:49:29] apptainer works
[2025-06-05 15:49:29] Set ATHENA_PROC_NUMBER=8
[2025-06-05 15:49:29] Set ATHENA_CORE_NUMBER=8
[2025-06-05 15:49:29] Starting ATLAS job with PandaID=6668531210
[2025-06-05 15:49:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 19:52:58]  *** The last 200 lines of the pilot log: ***
[2025-06-05 19:52:58] 2025-06-05 23:52:43,347 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 19:52:58] 2025-06-05 23:52:43,348 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668531210/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 19:52:58] 2025-06-05 23:52:43,350 | INFO     | extracted standard info from prmon json
[2025-06-05 19:52:58] 2025-06-05 23:52:43,350 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 19:52:58] 2025-06-05 23:52:43,350 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 19:52:58] 2025-06-05 23:52:43,351 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 19:52:58] 2025-06-05 23:52:43,352 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 19:52:58] 2025-06-05 23:52:43,364 | INFO     | fitting pss+swap vs Time
[2025-06-05 19:52:58] 2025-06-05 23:52:43,365 | INFO     | sum of square deviations: 4180243959.5
[2025-06-05 19:52:58] 2025-06-05 23:52:43,370 | INFO     | sum of deviations: 62833977718.49995
[2025-06-05 19:52:58] 2025-06-05 23:52:43,370 | INFO     | mean x: 1749160257.5
[2025-06-05 19:52:58] 2025-06-05 23:52:43,370 | INFO     | mean y: 2387447.399159664
[2025-06-05 19:52:58] 2025-06-05 23:52:43,371 | INFO     | -- intersect: -26289546159.984512
[2025-06-05 19:52:58] 2025-06-05 23:52:43,371 | INFO     | intersect: -26289546159.984512
[2025-06-05 19:52:58] 2025-06-05 23:52:43,372 | INFO     | chi2: 3.323137036290836
[2025-06-05 19:52:58] 2025-06-05 23:52:43,373 | INFO     | sum of square deviations: 3922276332.0
[2025-06-05 19:52:58] 2025-06-05 23:52:43,377 | INFO     | sum of deviations: 78603396164.99997
[2025-06-05 19:52:58] 2025-06-05 23:52:43,377 | INFO     | mean x: 1749160105.0
[2025-06-05 19:52:58] 2025-06-05 23:52:43,378 | INFO     | mean y: 2396612.6137339054
[2025-06-05 19:52:58] 2025-06-05 23:52:43,378 | INFO     | -- intersect: -35051208246.282265
[2025-06-05 19:52:58] 2025-06-05 23:52:43,378 | INFO     | intersect: -35051208246.282265
[2025-06-05 19:52:58] 2025-06-05 23:52:43,379 | INFO     | chi2: 2.532131257513588
[2025-06-05 19:52:58] 2025-06-05 23:52:43,379 | INFO     | current chi2=2.532131257513588 (change=23.802984052085314 %)
[2025-06-05 19:52:58] 2025-06-05 23:52:43,379 | INFO     | right removable region: 232
[2025-06-05 19:52:58] 2025-06-05 23:52:43,380 | INFO     | sum of square deviations: 3922276332.0
[2025-06-05 19:52:58] 2025-06-05 23:52:43,384 | INFO     | sum of deviations: 12122996406.0
[2025-06-05 19:52:58] 2025-06-05 23:52:43,385 | INFO     | mean x: 1749160410.0
[2025-06-05 19:52:58] 2025-06-05 23:52:43,385 | INFO     | mean y: 2417293.836909871
[2025-06-05 19:52:58] 2025-06-05 23:52:43,385 | INFO     | -- intersect: -5403898724.987509
[2025-06-05 19:52:58] 2025-06-05 23:52:43,385 | INFO     | intersect: -5403898724.987509
[2025-06-05 19:52:58] 2025-06-05 23:52:43,386 | INFO     | chi2: 1.3065756273019722
[2025-06-05 19:52:58] 2025-06-05 23:52:43,387 | INFO     | current chi2=1.3065756273019722 (change=60.68246319566995 %)
[2025-06-05 19:52:58] 2025-06-05 23:52:43,388 | INFO     | sum of square deviations: 3675146117.0
[2025-06-05 19:52:58] 2025-06-05 23:52:43,391 | INFO     | sum of deviations: -9459948411.500004
[2025-06-05 19:52:58] 2025-06-05 23:52:43,392 | INFO     | mean x: 1749160562.5
[2025-06-05 19:52:58] 2025-06-05 23:52:43,392 | INFO     | mean y: 2430572.8903508773
[2025-06-05 19:52:58] 2025-06-05 23:52:43,392 | INFO     | -- intersect: 4504828071.629128
[2025-06-05 19:52:58] 2025-06-05 23:52:43,392 | INFO     | intersect: 4504828071.629128
[2025-06-05 19:52:58] 2025-06-05 23:52:43,393 | INFO     | chi2: 0.9701036796495377
[2025-06-05 19:52:58] 2025-06-05 23:52:43,394 | INFO     | current chi2=0.9701036796495377 (change=25.752198389559428 %)
[2025-06-05 19:52:58] 2025-06-05 23:52:43,394 | INFO     | sum of square deviations: 3438620752.0
[2025-06-05 19:52:58] 2025-06-05 23:52:43,398 | INFO     | sum of deviations: -16211059819.0
[2025-06-05 19:52:58] 2025-06-05 23:52:43,398 | INFO     | mean x: 1749160715.0
[2025-06-05 19:52:58] 2025-06-05 23:52:43,399 | INFO     | mean y: 2434887.0582959643
[2025-06-05 19:52:58] 2025-06-05 23:52:43,399 | INFO     | -- intersect: 8248691461.708844
[2025-06-05 19:52:58] 2025-06-05 23:52:43,399 | INFO     | intersect: 8248691461.708844
[2025-06-05 19:52:58] 2025-06-05 23:52:43,400 | INFO     | chi2: 0.914848207051226
[2025-06-05 19:52:58] 2025-06-05 23:52:43,400 | INFO     | current chi2=0.914848207051226 (change=5.695831668041234 %)
[2025-06-05 19:52:58] 2025-06-05 23:52:43,400 | INFO     | left removable region: 30
[2025-06-05 19:52:58] 2025-06-05 23:52:43,401 | INFO     | sum of square deviations: 2555770710.5
[2025-06-05 19:52:58] 2025-06-05 23:52:43,405 | INFO     | sum of deviations: -2193986298.5
[2025-06-05 19:52:58] 2025-06-05 23:52:43,405 | INFO     | mean x: 1749160989.5
[2025-06-05 19:52:58] 2025-06-05 23:52:43,405 | INFO     | mean y: 2448349.579207921
[2025-06-05 19:52:58] 2025-06-05 23:52:43,405 | INFO     | -- intersect: 1504005288.5750868
[2025-06-05 19:52:58] 2025-06-05 23:52:43,406 | INFO     | intersect: 1504005288.5750868
[2025-06-05 19:52:58] 2025-06-05 23:52:43,406 | INFO     | chi2: 0.10627983446752687
[2025-06-05 19:52:58] 2025-06-05 23:52:43,407 | INFO     | -- intersect: 1504005288.5750868
[2025-06-05 19:52:58] 2025-06-05 23:52:43,407 | INFO     | current memory leak: -0.86 B/s (using 202 data points, chi2=0.11)
[2025-06-05 19:52:58] 2025-06-05 23:52:43,408 | INFO     | ..............................
[2025-06-05 19:52:58] 2025-06-05 23:52:43,409 | INFO     | . Timing measurements:
[2025-06-05 19:52:58] 2025-06-05 23:52:43,409 | INFO     | . get job = 0 s
[2025-06-05 19:52:58] 2025-06-05 23:52:43,409 | INFO     | . initial setup = 2 s
[2025-06-05 19:52:58] 2025-06-05 23:52:43,409 | INFO     | . payload setup = 13 s
[2025-06-05 19:52:58] 2025-06-05 23:52:43,409 | INFO     | . stage-in = 0 s
[2025-06-05 19:52:58] 2025-06-05 23:52:43,410 | INFO     | . payload execution = 14523 s
[2025-06-05 19:52:58] 2025-06-05 23:52:43,410 | INFO     | . stage-out = 3 s
[2025-06-05 19:52:58] 2025-06-05 23:52:43,410 | INFO     | . log creation = 0 s
[2025-06-05 19:52:58] 2025-06-05 23:52:43,410 | INFO     | ..............................
[2025-06-05 19:52:58] 2025-06-05 23:52:43,678 | INFO     | 
[2025-06-05 19:52:58] 2025-06-05 23:52:43,679 | INFO     | job summary report
[2025-06-05 19:52:58] 2025-06-05 23:52:43,679 | INFO     | --------------------------------------------------
[2025-06-05 19:52:58] 2025-06-05 23:52:43,679 | INFO     | PanDA job id: 6668531210
[2025-06-05 19:52:58] 2025-06-05 23:52:43,680 | INFO     | task id: 44871837
[2025-06-05 19:52:58] 2025-06-05 23:52:43,680 | INFO     | errors: (none)
[2025-06-05 19:52:58] 2025-06-05 23:52:43,680 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 19:52:58] 2025-06-05 23:52:43,680 | INFO     | pilot state: finished 
[2025-06-05 19:52:58] 2025-06-05 23:52:43,680 | INFO     | transexitcode: 0
[2025-06-05 19:52:58] 2025-06-05 23:52:43,681 | INFO     | exeerrorcode: 0
[2025-06-05 19:52:58] 2025-06-05 23:52:43,681 | INFO     | exeerrordiag: 
[2025-06-05 19:52:58] 2025-06-05 23:52:43,681 | INFO     | exitcode: 0
[2025-06-05 19:52:58] 2025-06-05 23:52:43,681 | INFO     | exitmsg: OK
[2025-06-05 19:52:58] 2025-06-05 23:52:43,681 | INFO     | cpuconsumptiontime: 108531 s
[2025-06-05 19:52:58] 2025-06-05 23:52:43,682 | INFO     | nevents: 400
[2025-06-05 19:52:58] 2025-06-05 23:52:43,682 | INFO     | neventsw: 0
[2025-06-05 19:52:58] 2025-06-05 23:52:43,682 | INFO     | pid: 2278489
[2025-06-05 19:52:58] 2025-06-05 23:52:43,682 | INFO     | pgrp: 2278489
[2025-06-05 19:52:58] 2025-06-05 23:52:43,682 | INFO     | corecount: 8
[2025-06-05 19:52:58] 2025-06-05 23:52:43,683 | INFO     | event service: False
[2025-06-05 19:52:58] 2025-06-05 23:52:43,683 | INFO     | sizes: {0: 2397221, 1: 2397306, 2: 2397420, 10: 2397654, 13: 2397682, 14541: 2428831, 14545: 2437772, 14546: 2437828, 14556: 2437998}
[2025-06-05 19:52:58] 2025-06-05 23:52:43,683 | INFO     | --------------------------------------------------
[2025-06-05 19:52:58] 2025-06-05 23:52:43,683 | INFO     | 
[2025-06-05 19:52:58] 2025-06-05 23:52:43,684 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 19:52:58] 2025-06-05 23:52:43,723 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 19:52:58] 2025-06-05 23:52:43,724 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 19:52:58] 2025-06-05 23:52:43,724 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 19:52:58] 2025-06-05 23:52:43,725 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 19:52:58] 2025-06-05 23:52:43,725 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 19:52:58] 2025-06-05 23:52:43,725 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 19:52:58] 2025-06-05 23:52:43,725 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 19:52:58] 2025-06-05 23:52:43,725 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 19:52:58] 2025-06-05 23:52:43,726 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 19:52:58] 2025-06-05 23:52:43,726 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 19:52:58] 2025-06-05 23:52:43,726 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 19:52:58] 2025-06-05 23:52:43,726 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 19:52:58] 2025-06-05 23:52:43,727 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 19:52:58] 2025-06-05 23:52:43,727 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 19:52:58] 2025-06-05 23:52:43,727 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 19:52:58] 2025-06-05 23:52:43,727 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 19:52:58] 2025-06-05 23:52:43,727 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 19:52:58] 2025-06-05 23:52:43,728 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 19:52:58] 2025-06-05 23:52:43,728 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 19:52:58] 2025-06-05 23:52:43,728 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 19:52:58] 2025-06-05 23:52:43,728 | INFO     | job 6668531210 has completed (purged errors)
[2025-06-05 19:52:58] 2025-06-05 23:52:43,729 | INFO     | overall cleanup function is called
[2025-06-05 19:52:58] 2025-06-05 23:52:44,741 | INFO     | --- collectZombieJob: --- 10, [2278489]
[2025-06-05 19:52:58] 2025-06-05 23:52:44,742 | INFO     | zombie collector waiting for pid 2278489
[2025-06-05 19:52:58] 2025-06-05 23:52:44,742 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 19:52:58] 2025-06-05 23:52:44,742 | INFO     | collected zombie processes
[2025-06-05 19:52:58] 2025-06-05 23:52:44,742 | INFO     | will attempt to kill all subprocesses of pid=2278489
[2025-06-05 19:52:58] 2025-06-05 23:52:45,696 | INFO     | process IDs to be killed: [2278489] (in reverse order)
[2025-06-05 19:52:58] 2025-06-05 23:52:45,949 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 19:52:58] 2025-06-05 23:52:45,950 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 19:52:58] 2025-06-05 23:52:45,982 | INFO     | did not find any defunct processes belonging to 2278489
[2025-06-05 19:52:58] 2025-06-05 23:52:46,013 | INFO     | did not find any defunct processes belonging to 2278489
[2025-06-05 19:52:58] 2025-06-05 23:52:46,014 | INFO     | ready for new job
[2025-06-05 19:52:58] 2025-06-05 23:52:46,014 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 19:52:58] 2025-06-05 23:52:46,019 | INFO     | **************************************
[2025-06-05 19:52:58] 2025-06-05 23:52:46,019 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 19:52:58] 2025-06-05 23:52:46,019 | INFO     | **************************************
[2025-06-05 19:52:58] 2025-06-05 23:52:46,019 | INFO     | 
[2025-06-05 19:52:58] 2025-06-05 23:52:46,046 | INFO     | architecture information:
[2025-06-05 19:52:58] 2025-06-05 23:52:46,047 | INFO     | executing command: cat /etc/os-release
[2025-06-05 19:52:58] 2025-06-05 23:52:46,076 | INFO     | cat /etc/os-release:
[2025-06-05 19:52:58] NAME="CentOS Linux"
[2025-06-05 19:52:58] VERSION="7 (Core)"
[2025-06-05 19:52:58] ID="centos"
[2025-06-05 19:52:58] ID_LIKE="rhel fedora"
[2025-06-05 19:52:58] VERSION_ID="7"
[2025-06-05 19:52:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 19:52:58] ANSI_COLOR="0;31"
[2025-06-05 19:52:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 19:52:58] HOME_URL="https://www.centos.org/"
[2025-06-05 19:52:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 19:52:58] 
[2025-06-05 19:52:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 19:52:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 19:52:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 19:52:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 19:52:58] 
[2025-06-05 19:52:58] 2025-06-05 23:52:46,077 | INFO     | **************************************
[2025-06-05 19:52:58] 2025-06-05 23:52:46,580 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 19:52:58] 2025-06-05 23:52:46,613 | INFO     | sufficient remaining disk space (96106184704 B)
[2025-06-05 19:52:58] 2025-06-05 23:52:46,614 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 19:52:58] 2025-06-05 23:52:46,614 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 19:52:58] 2025-06-05 23:52:46,615 | INFO     | update_server=False
[2025-06-05 19:52:58] 2025-06-05 23:52:46,615 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 19:52:58] 2025-06-05 23:52:46,615 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 19:52:58] 2025-06-05 23:52:46,616 | INFO     | aborting loop
[2025-06-05 19:52:58] 2025-06-05 23:52:46,828 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 19:52:58] 2025-06-05 23:52:46,829 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 19:52:58] 2025-06-05 23:52:46,829 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 19:52:58] 2025-06-05 23:52:47,267 | INFO     | all data control threads have been joined
[2025-06-05 19:52:58] 2025-06-05 23:52:47,538 | INFO     | all payload control threads have been joined
[2025-06-05 19:52:58] 2025-06-05 23:52:47,621 | INFO     | [job] retrieve thread has finished
[2025-06-05 19:52:58] 2025-06-05 23:52:47,622 | INFO     | [job] job monitor thread has finished
[2025-06-05 19:52:58] 2025-06-05 23:52:47,655 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 19:52:58] 2025-06-05 23:52:47,798 | INFO     | [payload] failed_post thread has finished
[2025-06-05 19:52:58] 2025-06-05 23:52:47,839 | INFO     | all job control threads have been joined
[2025-06-05 19:52:58] 2025-06-05 23:52:47,927 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 19:52:58] 2025-06-05 23:52:47,929 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 19:52:58] 2025-06-05 23:52:48,215 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 19:52:58] 2025-06-05 23:52:48,273 | INFO     | [data] control thread has finished
[2025-06-05 19:52:58] 2025-06-05 23:52:48,483 | INFO     | [job] validate thread has finished
[2025-06-05 19:52:58] 2025-06-05 23:52:48,543 | INFO     | [payload] control thread has finished
[2025-06-05 19:52:58] 2025-06-05 23:52:48,631 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 19:52:58] 2025-06-05 23:52:48,689 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 19:52:58] 2025-06-05 23:52:48,690 | INFO     | [data] copytool_in thread has finished
[2025-06-05 19:52:58] 2025-06-05 23:52:48,690 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 19:52:58] 2025-06-05 23:52:48,792 | INFO     | [payload] validate_post thread has finished
[2025-06-05 19:52:58] 2025-06-05 23:52:48,844 | INFO     | [job] control thread has finished
[2025-06-05 19:52:58] 2025-06-05 23:52:49,661 | INFO     | [data] copytool_out thread has finished
[2025-06-05 19:52:58] 2025-06-05 23:52:49,696 | INFO     | [job] queue monitor thread has finished
[2025-06-05 19:52:58] 2025-06-05 23:52:52,222 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 19:52:58] 2025-06-05 23:52:53,088 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140409972074304)>', '<ExcThread(monitor, started 140409619588864)>']
[2025-06-05 19:52:58] 2025-06-05 23:52:53,864 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 19:52:58] 2025-06-05 23:52:53,864 | INFO     | [monitor] control thread has ended
[2025-06-05 19:52:58] 2025-06-05 23:52:58,114 | INFO     | all workflow threads have been joined
[2025-06-05 19:52:58] 2025-06-05 23:52:58,115 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 19:52:58] 2025-06-05 23:52:58,115 | INFO     | traces error code: 0
[2025-06-05 19:52:58] 2025-06-05 23:52:58,116 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 19:52:58] 2025-06-05 23:52:58,409 [wrapper] ==== pilot stdout END ====
[2025-06-05 19:52:58] 2025-06-05 23:52:58,415 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 19:52:58] 2025-06-05 23:52:58,420 [wrapper] pilotpid: 2268490
[2025-06-05 19:52:58] 2025-06-05 23:52:58,426 [wrapper] Pilot exit status: 0
[2025-06-05 19:52:58] 2025-06-05 23:52:58,448 [wrapper] pandaids: 6668531210 6668531210
[2025-06-05 19:52:58] 2025-06-05 23:52:58,620 [wrapper] cleanup supervisor_pilot 2844231 2268491
[2025-06-05 19:52:58] 2025-06-05 23:52:58,626 [wrapper] Test setup, not cleaning
[2025-06-05 19:52:58] 2025-06-05 23:52:58,631 [wrapper] apfmon messages muted
[2025-06-05 19:52:58] 2025-06-05 23:52:58,637 [wrapper] ==== wrapper stdout END ====
[2025-06-05 19:52:58] 2025-06-05 23:52:58,642 [wrapper] ==== wrapper stderr END ====
[2025-06-05 19:52:58]  *** Error codes and diagnostics ***
[2025-06-05 19:52:58]     "exeErrorCode": 0,
[2025-06-05 19:52:58]     "exeErrorDiag": "",
[2025-06-05 19:52:58]     "pilotErrorCode": 0,
[2025-06-05 19:52:58]     "pilotErrorDiag": "",
[2025-06-05 19:52:58]  *** Listing of results directory ***
[2025-06-05 19:52:58] total 636200
[2025-06-05 19:52:58] drwx------. 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-06-05 19:52:58] -rw-r--r--. 1 boincer umatlas    495897 May 28 09:15 pilot3.tar.gz
[2025-06-05 19:52:58] -rwx------. 1 boincer umatlas     37140 May 28 09:43 runpilot2-wrapper.sh
[2025-06-05 19:52:58] -rw-r--r--. 1 boincer umatlas      5111 May 28 09:43 queuedata.json
[2025-06-05 19:52:58] -rw-r--r--. 1 boincer umatlas       100 Jun  5 15:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 19:52:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 15:16 run_atlas
[2025-06-05 19:52:58] -rw-r--r--. 1 boincer umatlas       105 Jun  5 15:16 job.xml
[2025-06-05 19:52:58] -rw-r--r--. 3 boincer umatlas 224047817 Jun  5 15:16 EVNT.44871834._003315.pool.root.1
[2025-06-05 19:52:58] -rw-r--r--. 3 boincer umatlas 224047817 Jun  5 15:16 ATLAS.root_0
[2025-06-05 19:52:58] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 15:16 start_atlas.sh
[2025-06-05 19:52:58] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 15:16 shared
[2025-06-05 19:52:58] -rw-r--r--. 2 boincer umatlas    508879 Jun  5 15:16 input.tar.gz
[2025-06-05 19:52:58] -rw-r--r--. 1 boincer umatlas         0 Jun  5 15:16 boinc_lockfile
[2025-06-05 19:52:58] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 15:49 pandaJob.out
[2025-06-05 19:52:58] -rw-------. 1 boincer umatlas    986745 Jun  5 15:49 agis_schedconf.cvmfs.json
[2025-06-05 19:52:58] -rw-r--r--. 1 boincer umatlas      6860 Jun  5 19:50 init_data.xml
[2025-06-05 19:52:58] -rw-------. 1 boincer umatlas 196131013 Jun  5 19:51 HITS.44871837._085036.pool.root.1
[2025-06-05 19:52:58] -rw-r--r--. 1 boincer umatlas       531 Jun  5 19:51 boinc_task_state.xml
[2025-06-05 19:52:58] -rw-------. 1 boincer umatlas        96 Jun  5 19:52 pilot_heartbeat.json
[2025-06-05 19:52:58] -rw-------. 1 boincer umatlas      1045 Jun  5 19:52 memory_monitor_summary.json
[2025-06-05 19:52:58] -rw-------. 1 boincer umatlas   1598969 Jun  5 19:52 agis_ddmendpoints.agis.ALL.json
[2025-06-05 19:52:58] -rw-------. 1 boincer umatlas    415361 Jun  5 19:52 log.44871837._085036.job.log.tgz.1
[2025-06-05 19:52:58] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 19:52 boinc_mmap_file
[2025-06-05 19:52:58] -rw-r--r--. 1 boincer umatlas        29 Jun  5 19:52 wrapper_checkpoint.txt
[2025-06-05 19:52:58] -rw-------. 1 boincer umatlas      7732 Jun  5 19:52 heartbeat.json
[2025-06-05 19:52:58] -rw-------. 1 boincer umatlas      4353 Jun  5 19:52 pilotlog.txt
[2025-06-05 19:52:58] -rw-------. 1 boincer umatlas   1284441 Jun  5 19:52 log.44871837._085036.job.log.1
[2025-06-05 19:52:58] -rw-------. 1 boincer umatlas       357 Jun  5 19:52 output.list
[2025-06-05 19:52:58] -rw-r--r--. 1 boincer umatlas       620 Jun  5 19:52 runtime_log
[2025-06-05 19:52:58] -rw-------. 1 boincer umatlas   1720320 Jun  5 19:52 result.tar.gz
[2025-06-05 19:52:58] -rw-------. 1 boincer umatlas       781 Jun  5 19:52 UQ6KDmmEWe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7FcKDm4US6ln.diag
[2025-06-05 19:52:58] -rw-r--r--. 1 boincer umatlas      8755 Jun  5 19:52 runtime_log.err
[2025-06-05 19:52:58] -rw-r--r--. 1 boincer umatlas     23008 Jun  5 19:52 stderr.txt
[2025-06-05 19:52:58] HITS file was successfully produced:
[2025-06-05 19:52:58] -rw-------. 1 boincer umatlas 196131013 Jun  5 19:51 shared/HITS.pool.root.1
[2025-06-05 19:52:58]  *** Contents of shared directory: ***
[2025-06-05 19:52:58] total 412540
[2025-06-05 19:52:58] -rw-r--r--. 3 boincer umatlas 224047817 Jun  5 15:16 ATLAS.root_0
[2025-06-05 19:52:58] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 15:16 start_atlas.sh
[2025-06-05 19:52:58] -rw-r--r--. 2 boincer umatlas    508879 Jun  5 15:16 input.tar.gz
[2025-06-05 19:52:58] -rw-------. 1 boincer umatlas 196131013 Jun  5 19:51 HITS.pool.root.1
[2025-06-05 19:52:58] -rw-------. 1 boincer umatlas   1720320 Jun  5 19:52 result.tar.gz
19:53:00 (2262505): run_atlas exited; CPU time 110068.836777
19:53:00 (2262505): called boinc_finish(0)

</stderr_txt>
]]>

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