Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:14:26 (3781021): wrapper (7.7.26015): starting
15:14:26 (3781021): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 15:14:26] Arguments: --nthreads 8
[2025-06-05 15:14:26] Threads: 8
[2025-06-05 15:14:26] Checking for CVMFS
[2025-06-05 15:14:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 15:14:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 15:14:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 15:14:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 15:14:27] 2.12.6.0 861369 34645 575064 146829 1 940 34861307 40960000 13414 16776704 0 161078486 99.659 148628772 26184 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 15:14:27] CVMFS is ok
[2025-06-05 15:14:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 15:14:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 15:14:27] Further information can be found at the LHC@home message board.
[2025-06-05 15:14:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 15:14:27] Checking for apptainer binary...
[2025-06-05 15:14:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 15:14:27] Running /usr/bin/apptainer --version
[2025-06-05 15:14:27] apptainer version 1.4.1-1.el9
[2025-06-05 15:14:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 15:14:27] c7-13-33.aglt2.org
[2025-06-05 15:14:27] apptainer works
[2025-06-05 15:14:27] Set ATHENA_PROC_NUMBER=8
[2025-06-05 15:14:27] Set ATHENA_CORE_NUMBER=8
[2025-06-05 15:14:27] Starting ATLAS job with PandaID=6667925098
[2025-06-05 15:14:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 16:59:15]  *** The last 200 lines of the pilot log: ***
[2025-06-05 16:59:15] 2025-06-05 20:58:51,783 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 16:59:15] 2025-06-05 20:58:52,061 | INFO     | number of running child processes to parent process 3805618: 1
[2025-06-05 16:59:15] 2025-06-05 20:58:52,061 | INFO     | maximum number of monitored processes: 6
[2025-06-05 16:59:15] 2025-06-05 20:58:54,565 | INFO     | monitor loop #455: job 0:6667925098 is in state 'finished'
[2025-06-05 16:59:15] 2025-06-05 20:58:54,566 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 16:59:15] 2025-06-05 20:58:56,085 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 16:59:15] 2025-06-05 20:58:56,085 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667925098/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 16:59:15] 2025-06-05 20:58:56,086 | INFO     | extracted standard info from prmon json
[2025-06-05 16:59:15] 2025-06-05 20:58:56,086 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 16:59:15] 2025-06-05 20:58:56,086 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 16:59:15] 2025-06-05 20:58:56,086 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 16:59:15] 2025-06-05 20:58:56,086 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 16:59:15] 2025-06-05 20:58:56,088 | INFO     | fitting pss+swap vs Time
[2025-06-05 16:59:15] 2025-06-05 20:58:56,088 | INFO     | sum of square deviations: 329031285.5
[2025-06-05 16:59:15] 2025-06-05 20:58:56,088 | INFO     | sum of deviations: 5613781810.000002
[2025-06-05 16:59:15] 2025-06-05 20:58:56,089 | INFO     | mean x: 1749153984.5
[2025-06-05 16:59:15] 2025-06-05 20:58:56,089 | INFO     | mean y: 2205385.6666666665
[2025-06-05 16:59:15] 2025-06-05 20:58:56,089 | INFO     | -- intersect: -29841062576.38591
[2025-06-05 16:59:15] 2025-06-05 20:58:56,089 | INFO     | intersect: -29841062576.38591
[2025-06-05 16:59:15] 2025-06-05 20:58:56,089 | INFO     | chi2: 1.4937703321279339
[2025-06-05 16:59:15] 2025-06-05 20:58:56,089 | INFO     | sum of square deviations: 282974608.0
[2025-06-05 16:59:15] 2025-06-05 20:58:56,089 | INFO     | sum of deviations: 5955273047.000007
[2025-06-05 16:59:15] 2025-06-05 20:58:56,090 | INFO     | mean x: 1749153832.0
[2025-06-05 16:59:15] 2025-06-05 20:58:56,090 | INFO     | mean y: 2206504.5154639175
[2025-06-05 16:59:15] 2025-06-05 20:58:56,090 | INFO     | -- intersect: -36809183550.54693
[2025-06-05 16:59:15] 2025-06-05 20:58:56,090 | INFO     | intersect: -36809183550.54693
[2025-06-05 16:59:15] 2025-06-05 20:58:56,090 | INFO     | chi2: 1.4953328309576903
[2025-06-05 16:59:15] 2025-06-05 20:58:56,090 | INFO     | current chi2=1.4953328309576903 (change=-0.10460100834447643 %)
[2025-06-05 16:59:15] 2025-06-05 20:58:56,090 | INFO     | right removable region: 96
[2025-06-05 16:59:15] 2025-06-05 20:58:56,090 | INFO     | sum of square deviations: 282974608.0
[2025-06-05 16:59:15] 2025-06-05 20:58:56,091 | INFO     | sum of deviations: -7940051152.999999
[2025-06-05 16:59:15] 2025-06-05 20:58:56,091 | INFO     | mean x: 1749154137.0
[2025-06-05 16:59:15] 2025-06-05 20:58:56,091 | INFO     | mean y: 2249342.505154639
[2025-06-05 16:59:15] 2025-06-05 20:58:56,091 | INFO     | -- intersect: 49082177115.606155
[2025-06-05 16:59:15] 2025-06-05 20:58:56,091 | INFO     | intersect: 49082177115.606155
[2025-06-05 16:59:15] 2025-06-05 20:58:56,091 | INFO     | chi2: 0.049289872687312324
[2025-06-05 16:59:15] 2025-06-05 20:58:56,091 | INFO     | current chi2=0.049289872687312324 (change=96.70030448274488 %)
[2025-06-05 16:59:15] 2025-06-05 20:58:56,091 | INFO     | sum of square deviations: 241429643.0
[2025-06-05 16:59:15] 2025-06-05 20:58:56,092 | INFO     | sum of deviations: -7860174611.5
[2025-06-05 16:59:15] 2025-06-05 20:58:56,092 | INFO     | mean x: 1749154289.5
[2025-06-05 16:59:15] 2025-06-05 20:58:56,092 | INFO     | mean y: 2249077.967391304
[2025-06-05 16:59:15] 2025-06-05 20:58:56,092 | INFO     | -- intersect: 56949101034.85084
[2025-06-05 16:59:15] 2025-06-05 20:58:56,092 | INFO     | intersect: 56949101034.85084
[2025-06-05 16:59:15] 2025-06-05 20:58:56,092 | INFO     | chi2: 0.04128431009637491
[2025-06-05 16:59:15] 2025-06-05 20:58:56,092 | INFO     | current chi2=0.04128431009637491 (change=16.24180009902545 %)
[2025-06-05 16:59:15] 2025-06-05 20:58:56,092 | INFO     | left removable region: 20
[2025-06-05 16:59:15] 2025-06-05 20:58:56,092 | INFO     | sum of square deviations: 136095575.0
[2025-06-05 16:59:15] 2025-06-05 20:58:56,093 | INFO     | sum of deviations: -6228031740.999999
[2025-06-05 16:59:15] 2025-06-05 20:58:56,093 | INFO     | mean x: 1749154411.5
[2025-06-05 16:59:15] 2025-06-05 20:58:56,093 | INFO     | mean y: 2250520.263157895
[2025-06-05 16:59:15] 2025-06-05 20:58:56,093 | INFO     | -- intersect: 80047389348.12125
[2025-06-05 16:59:15] 2025-06-05 20:58:56,093 | INFO     | intersect: 80047389348.12125
[2025-06-05 16:59:15] 2025-06-05 20:58:56,093 | INFO     | chi2: 0.028066223941466687
[2025-06-05 16:59:15] 2025-06-05 20:58:56,093 | INFO     | -- intersect: 80047389348.12125
[2025-06-05 16:59:15] 2025-06-05 20:58:56,093 | INFO     | current memory leak: -45.76 B/s (using 76 data points, chi2=0.03)
[2025-06-05 16:59:15] 2025-06-05 20:58:56,094 | INFO     | ..............................
[2025-06-05 16:59:15] 2025-06-05 20:58:56,094 | INFO     | . Timing measurements:
[2025-06-05 16:59:15] 2025-06-05 20:58:56,094 | INFO     | . get job = 0 s
[2025-06-05 16:59:15] 2025-06-05 20:58:56,094 | INFO     | . initial setup = 2 s
[2025-06-05 16:59:15] 2025-06-05 20:58:56,094 | INFO     | . payload setup = 6 s
[2025-06-05 16:59:15] 2025-06-05 20:58:56,094 | INFO     | . stage-in = 0 s
[2025-06-05 16:59:15] 2025-06-05 20:58:56,094 | INFO     | . payload execution = 6225 s
[2025-06-05 16:59:15] 2025-06-05 20:58:56,094 | INFO     | . stage-out = 0 s
[2025-06-05 16:59:15] 2025-06-05 20:58:56,094 | INFO     | . log creation = 0 s
[2025-06-05 16:59:15] 2025-06-05 20:58:56,094 | INFO     | ..............................
[2025-06-05 16:59:15] 2025-06-05 20:58:56,168 | INFO     | 
[2025-06-05 16:59:15] 2025-06-05 20:58:56,168 | INFO     | job summary report
[2025-06-05 16:59:15] 2025-06-05 20:58:56,168 | INFO     | --------------------------------------------------
[2025-06-05 16:59:15] 2025-06-05 20:58:56,168 | INFO     | PanDA job id: 6667925098
[2025-06-05 16:59:15] 2025-06-05 20:58:56,168 | INFO     | task id: 44871837
[2025-06-05 16:59:15] 2025-06-05 20:58:56,168 | INFO     | errors: (none)
[2025-06-05 16:59:15] 2025-06-05 20:58:56,168 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 16:59:15] 2025-06-05 20:58:56,168 | INFO     | pilot state: finished 
[2025-06-05 16:59:15] 2025-06-05 20:58:56,168 | INFO     | transexitcode: 0
[2025-06-05 16:59:15] 2025-06-05 20:58:56,168 | INFO     | exeerrorcode: 0
[2025-06-05 16:59:15] 2025-06-05 20:58:56,169 | INFO     | exeerrordiag: 
[2025-06-05 16:59:15] 2025-06-05 20:58:56,169 | INFO     | exitcode: 0
[2025-06-05 16:59:15] 2025-06-05 20:58:56,169 | INFO     | exitmsg: OK
[2025-06-05 16:59:15] 2025-06-05 20:58:56,169 | INFO     | cpuconsumptiontime: 40049 s
[2025-06-05 16:59:15] 2025-06-05 20:58:56,169 | INFO     | nevents: 400
[2025-06-05 16:59:15] 2025-06-05 20:58:56,169 | INFO     | neventsw: 0
[2025-06-05 16:59:15] 2025-06-05 20:58:56,169 | INFO     | pid: 3805618
[2025-06-05 16:59:15] 2025-06-05 20:58:56,169 | INFO     | pgrp: 3805618
[2025-06-05 16:59:15] 2025-06-05 20:58:56,169 | INFO     | corecount: 8
[2025-06-05 16:59:15] 2025-06-05 20:58:56,169 | INFO     | event service: False
[2025-06-05 16:59:15] 2025-06-05 20:58:56,169 | INFO     | sizes: {0: 2396564, 1: 2397420, 5: 2397626, 12: 2397682, 6235: 2424492, 6237: 2433617, 6243: 2433731}
[2025-06-05 16:59:15] 2025-06-05 20:58:56,169 | INFO     | --------------------------------------------------
[2025-06-05 16:59:15] 2025-06-05 20:58:56,169 | INFO     | 
[2025-06-05 16:59:15] 2025-06-05 20:58:56,169 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 16:59:15] 2025-06-05 20:58:56,195 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 16:59:15] 2025-06-05 20:58:56,196 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 16:59:15] 2025-06-05 20:58:56,196 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 16:59:15] 2025-06-05 20:58:56,196 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 16:59:15] 2025-06-05 20:58:56,196 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 16:59:15] 2025-06-05 20:58:56,196 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 16:59:15] 2025-06-05 20:58:56,196 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 16:59:15] 2025-06-05 20:58:56,196 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 16:59:15] 2025-06-05 20:58:56,196 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 16:59:15] 2025-06-05 20:58:56,196 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 16:59:15] 2025-06-05 20:58:56,196 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 16:59:15] 2025-06-05 20:58:56,196 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 16:59:15] 2025-06-05 20:58:56,196 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 16:59:15] 2025-06-05 20:58:56,196 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 16:59:15] 2025-06-05 20:58:56,196 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 16:59:15] 2025-06-05 20:58:56,197 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 16:59:15] 2025-06-05 20:58:56,197 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 16:59:15] 2025-06-05 20:58:56,197 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 16:59:15] 2025-06-05 20:58:56,197 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 16:59:15] 2025-06-05 20:58:56,197 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 16:59:15] 2025-06-05 20:58:56,197 | INFO     | job 6667925098 has completed (purged errors)
[2025-06-05 16:59:15] 2025-06-05 20:58:56,197 | INFO     | overall cleanup function is called
[2025-06-05 16:59:15] 2025-06-05 20:58:57,206 | INFO     | --- collectZombieJob: --- 10, [3805618]
[2025-06-05 16:59:15] 2025-06-05 20:58:57,207 | INFO     | zombie collector waiting for pid 3805618
[2025-06-05 16:59:15] 2025-06-05 20:58:57,207 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 16:59:15] 2025-06-05 20:58:57,207 | INFO     | collected zombie processes
[2025-06-05 16:59:15] 2025-06-05 20:58:57,207 | INFO     | will attempt to kill all subprocesses of pid=3805618
[2025-06-05 16:59:15] 2025-06-05 20:58:57,521 | INFO     | process IDs to be killed: [3805618] (in reverse order)
[2025-06-05 16:59:15] 2025-06-05 20:58:57,640 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 16:59:15] 2025-06-05 20:58:57,640 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 16:59:15] 2025-06-05 20:58:57,655 | INFO     | did not find any defunct processes belonging to 3805618
[2025-06-05 16:59:15] 2025-06-05 20:58:57,667 | INFO     | did not find any defunct processes belonging to 3805618
[2025-06-05 16:59:15] 2025-06-05 20:58:57,668 | INFO     | ready for new job
[2025-06-05 16:59:15] 2025-06-05 20:58:57,668 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 16:59:15] 2025-06-05 20:58:57,669 | INFO     | **************************************
[2025-06-05 16:59:15] 2025-06-05 20:58:57,669 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 16:59:15] 2025-06-05 20:58:57,669 | INFO     | **************************************
[2025-06-05 16:59:15] 2025-06-05 20:58:57,669 | INFO     | 
[2025-06-05 16:59:15] 2025-06-05 20:58:57,685 | INFO     | architecture information:
[2025-06-05 16:59:15] 2025-06-05 20:58:57,685 | INFO     | executing command: cat /etc/os-release
[2025-06-05 16:59:15] 2025-06-05 20:58:57,705 | INFO     | cat /etc/os-release:
[2025-06-05 16:59:15] NAME="CentOS Linux"
[2025-06-05 16:59:15] VERSION="7 (Core)"
[2025-06-05 16:59:15] ID="centos"
[2025-06-05 16:59:15] ID_LIKE="rhel fedora"
[2025-06-05 16:59:15] VERSION_ID="7"
[2025-06-05 16:59:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 16:59:15] ANSI_COLOR="0;31"
[2025-06-05 16:59:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 16:59:15] HOME_URL="https://www.centos.org/"
[2025-06-05 16:59:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 16:59:15] 
[2025-06-05 16:59:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 16:59:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 16:59:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 16:59:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 16:59:15] 
[2025-06-05 16:59:15] 2025-06-05 20:58:57,706 | INFO     | **************************************
[2025-06-05 16:59:15] 2025-06-05 20:58:58,209 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 16:59:15] 2025-06-05 20:58:58,233 | INFO     | sufficient remaining disk space (86499131392 B)
[2025-06-05 16:59:15] 2025-06-05 20:58:58,233 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 16:59:15] 2025-06-05 20:58:58,234 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 16:59:15] 2025-06-05 20:58:58,234 | INFO     | update_server=False
[2025-06-05 16:59:15] 2025-06-05 20:58:58,234 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 16:59:15] 2025-06-05 20:58:58,234 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 16:59:15] 2025-06-05 20:58:58,235 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:59:15] 2025-06-05 20:58:58,242 | INFO     | aborting loop
[2025-06-05 16:59:15] 2025-06-05 20:58:58,251 | INFO     | PID=3787911 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 16:59:15] 2025-06-05 20:58:58,251 | INFO     | .. there are 16 such processes running
[2025-06-05 16:59:15] 2025-06-05 20:58:58,251 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 16:59:15] 2025-06-05 20:58:58,251 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 16:59:15] 2025-06-05 20:58:58,252 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 16:59:15] 2025-06-05 20:58:58,828 | INFO     | all job control threads have been joined
[2025-06-05 16:59:15] 2025-06-05 20:58:58,992 | INFO     | all data control threads have been joined
[2025-06-05 16:59:15] 2025-06-05 20:58:59,239 | INFO     | [job] retrieve thread has finished
[2025-06-05 16:59:15] 2025-06-05 20:58:59,246 | INFO     | [job] job monitor thread has finished
[2025-06-05 16:59:15] 2025-06-05 20:58:59,374 | INFO     | [payload] failed_post thread has finished
[2025-06-05 16:59:15] 2025-06-05 20:58:59,450 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 16:59:15] 2025-06-05 20:58:59,591 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 16:59:15] 2025-06-05 20:58:59,713 | INFO     | all payload control threads have been joined
[2025-06-05 16:59:15] 2025-06-05 20:58:59,834 | INFO     | [job] control thread has finished
[2025-06-05 16:59:15] 2025-06-05 20:58:59,998 | INFO     | [data] control thread has finished
[2025-06-05 16:59:15] 2025-06-05 20:59:00,021 | INFO     | [data] copytool_in thread has finished
[2025-06-05 16:59:15] 2025-06-05 20:59:00,026 | INFO     | [payload] validate_post thread has finished
[2025-06-05 16:59:15] 2025-06-05 20:59:00,136 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 16:59:15] 2025-06-05 20:59:00,246 | INFO     | [data] copytool_out thread has finished
[2025-06-05 16:59:15] 2025-06-05 20:59:00,609 | INFO     | [job] validate thread has finished
[2025-06-05 16:59:15] 2025-06-05 20:59:00,718 | INFO     | [payload] control thread has finished
[2025-06-05 16:59:15] 2025-06-05 20:59:00,740 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 16:59:15] 2025-06-05 20:59:01,187 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:59:15] 2025-06-05 20:59:02,193 | INFO     | [job] queue monitor thread has finished
[2025-06-05 16:59:15] 2025-06-05 20:59:04,137 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 16:59:15] 2025-06-05 20:59:08,929 | INFO     | job.realtimelogging is not enabled
[2025-06-05 16:59:15] 2025-06-05 20:59:09,937 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 16:59:15] 2025-06-05 20:59:10,277 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140679105058624)>', '<ExcThread(monitor, started 140678449305344)>']
[2025-06-05 16:59:15] 2025-06-05 20:59:10,306 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 16:59:15] 2025-06-05 20:59:10,306 | INFO     | [monitor] control thread has ended
[2025-06-05 16:59:15] 2025-06-05 20:59:15,292 | INFO     | all workflow threads have been joined
[2025-06-05 16:59:15] 2025-06-05 20:59:15,293 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 16:59:15] 2025-06-05 20:59:15,293 | INFO     | traces error code: 0
[2025-06-05 16:59:15] 2025-06-05 20:59:15,293 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 16:59:15] 2025-06-05 20:59:15,445 [wrapper] ==== pilot stdout END ====
[2025-06-05 16:59:15] 2025-06-05 20:59:15,448 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 16:59:15] 2025-06-05 20:59:15,450 [wrapper] pilotpid: 3787911
[2025-06-05 16:59:15] 2025-06-05 20:59:15,453 [wrapper] Pilot exit status: 0
[2025-06-05 16:59:15] 2025-06-05 20:59:15,465 [wrapper] pandaids: 6667925098
[2025-06-05 16:59:15] 2025-06-05 20:59:15,545 [wrapper] cleanup supervisor_pilot  240719 3787913
[2025-06-05 16:59:15] 2025-06-05 20:59:15,548 [wrapper] Test setup, not cleaning
[2025-06-05 16:59:15] 2025-06-05 20:59:15,551 [wrapper] apfmon messages muted
[2025-06-05 16:59:15] 2025-06-05 20:59:15,554 [wrapper] ==== wrapper stdout END ====
[2025-06-05 16:59:15] 2025-06-05 20:59:15,557 [wrapper] ==== wrapper stderr END ====
[2025-06-05 16:59:15]  *** Error codes and diagnostics ***
[2025-06-05 16:59:15]     "exeErrorCode": 0,
[2025-06-05 16:59:15]     "exeErrorDiag": "",
[2025-06-05 16:59:15]     "pilotErrorCode": 0,
[2025-06-05 16:59:15]     "pilotErrorDiag": "",
[2025-06-05 16:59:15]  *** Listing of results directory ***
[2025-06-05 16:59:15] total 412160
[2025-06-05 16:59:15] -rw-r--r--. 1 boincer umatlas    495897 May 27 23:41 pilot3.tar.gz
[2025-06-05 16:59:15] -rwx------. 1 boincer umatlas     37140 May 27 23:57 runpilot2-wrapper.sh
[2025-06-05 16:59:15] -rw-r--r--. 1 boincer umatlas      5111 May 27 23:57 queuedata.json
[2025-06-05 16:59:15] -rw-r--r--. 1 boincer umatlas       100 Jun  5 15:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 16:59:15] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 15:14 run_atlas
[2025-06-05 16:59:15] -rw-r--r--. 1 boincer umatlas       105 Jun  5 15:14 job.xml
[2025-06-05 16:59:15] -rw-r--r--. 2 boincer umatlas 221675202 Jun  5 15:14 EVNT.44871834._003060.pool.root.1
[2025-06-05 16:59:15] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 15:14 start_atlas.sh
[2025-06-05 16:59:15] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 15:14 shared
[2025-06-05 16:59:15] -rw-r--r--. 2 boincer umatlas    508879 Jun  5 15:14 input.tar.gz
[2025-06-05 16:59:15] -rw-r--r--. 1 boincer umatlas         0 Jun  5 15:14 boinc_lockfile
[2025-06-05 16:59:15] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 15:14 pandaJob.out
[2025-06-05 16:59:15] -rw-------. 1 boincer umatlas    987543 Jun  5 15:14 agis_schedconf.cvmfs.json
[2025-06-05 16:59:15] -rw-------. 1 boincer umatlas   1598969 Jun  5 15:14 agis_ddmendpoints.agis.ALL.json
[2025-06-05 16:59:15] drwx------. 4 boincer umatlas      4096 Jun  5 15:14 pilot3
[2025-06-05 16:59:15] -rw-r--r--. 1 boincer umatlas      6896 Jun  5 16:57 init_data.xml
[2025-06-05 16:59:15] -rw-------. 1 boincer umatlas 194698104 Jun  5 16:58 HITS.44871837._078282.pool.root.1
[2025-06-05 16:59:15] -rw-r--r--. 1 boincer umatlas       529 Jun  5 16:58 boinc_task_state.xml
[2025-06-05 16:59:15] -rw-------. 1 boincer umatlas      1032 Jun  5 16:58 memory_monitor_summary.json
[2025-06-05 16:59:15] -rw-------. 1 boincer umatlas        95 Jun  5 16:58 pilot_heartbeat.json
[2025-06-05 16:59:15] -rw-------. 1 boincer umatlas    326573 Jun  5 16:58 log.44871837._078282.job.log.tgz.1
[2025-06-05 16:59:15] -rw-------. 1 boincer umatlas      7690 Jun  5 16:58 heartbeat.json
[2025-06-05 16:59:15] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 16:59 boinc_mmap_file
[2025-06-05 16:59:15] -rw-r--r--. 1 boincer umatlas        27 Jun  5 16:59 wrapper_checkpoint.txt
[2025-06-05 16:59:15] -rw-------. 1 boincer umatlas      4821 Jun  5 16:59 pilotlog.txt
[2025-06-05 16:59:15] -rw-------. 1 boincer umatlas    598822 Jun  5 16:59 log.44871837._078282.job.log.1
[2025-06-05 16:59:15] -rw-------. 1 boincer umatlas       357 Jun  5 16:59 output.list
[2025-06-05 16:59:15] -rw-r--r--. 1 boincer umatlas       620 Jun  5 16:59 runtime_log
[2025-06-05 16:59:15] -rw-------. 1 boincer umatlas    942080 Jun  5 16:59 result.tar.gz
[2025-06-05 16:59:15] -rw-r--r--. 1 boincer umatlas      8659 Jun  5 16:59 runtime_log.err
[2025-06-05 16:59:15] -rw-------. 1 boincer umatlas       656 Jun  5 16:59 ibfNDmu5Me7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbCbKDmMTe93m.diag
[2025-06-05 16:59:15] -rw-r--r--. 1 boincer umatlas     21181 Jun  5 16:59 stderr.txt
[2025-06-05 16:59:15] HITS file was successfully produced:
[2025-06-05 16:59:15] -rw-------. 1 boincer umatlas 194698104 Jun  5 16:58 shared/HITS.pool.root.1
[2025-06-05 16:59:15]  *** Contents of shared directory: ***
[2025-06-05 16:59:15] total 408056
[2025-06-05 16:59:15] -rw-r--r--. 2 boincer umatlas 221675202 Jun  5 15:14 ATLAS.root_0
[2025-06-05 16:59:15] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 15:14 start_atlas.sh
[2025-06-05 16:59:15] -rw-r--r--. 2 boincer umatlas    508879 Jun  5 15:14 input.tar.gz
[2025-06-05 16:59:15] -rw-------. 1 boincer umatlas 194698104 Jun  5 16:58 HITS.pool.root.1
[2025-06-05 16:59:15] -rw-------. 1 boincer umatlas    942080 Jun  5 16:59 result.tar.gz
16:59:37 (3781021): run_atlas exited; CPU time 40075.979353
16:59:37 (3781021): called boinc_finish(0)

</stderr_txt>
]]>

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