Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:41:56 (1877356): wrapper (7.7.26015): starting
16:41:56 (1877356): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 16:41:56] Arguments: --nthreads 12
[2025-06-05 16:41:56] Threads: 12
[2025-06-05 16:41:56] Checking for CVMFS
[2025-06-05 16:41:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 16:41:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 16:41:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 16:41:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 16:41:57] 2.12.6.0 5047 33385 431328 146831 1 68 29359194 32935936 13966 16776704 1 109675492 99.634 108411480 27016 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 16:41:57] CVMFS is ok
[2025-06-05 16:41:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 16:41:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 16:41:57] Further information can be found at the LHC@home message board.
[2025-06-05 16:41:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 16:41:57] Checking for apptainer binary...
[2025-06-05 16:41:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 16:41:57] Running /usr/bin/apptainer --version
[2025-06-05 16:41:57] apptainer version 1.4.1-1.el9
[2025-06-05 16:41:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 16:42:17] c6-6-39-2.aglt2.org
[2025-06-05 16:42:17] apptainer works
[2025-06-05 16:42:17] Set ATHENA_PROC_NUMBER=12
[2025-06-05 16:42:17] Set ATHENA_CORE_NUMBER=12
[2025-06-05 16:42:17] Starting ATLAS job with PandaID=6668863501
[2025-06-05 16:42:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 19:32:49]  *** The last 200 lines of the pilot log: ***
[2025-06-05 19:32:49] 2025-06-05 23:32:27,407 | INFO     | .. there are 9 such processes running
[2025-06-05 19:32:49] 2025-06-05 23:32:27,813 | INFO     | monitor loop #684: job 0:6668863501 is in state 'finished'
[2025-06-05 19:32:49] 2025-06-05 23:32:27,813 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 19:32:49] 2025-06-05 23:32:30,317 | INFO     | monitor loop #685: job 0:6668863501 is in state 'finished'
[2025-06-05 19:32:49] 2025-06-05 23:32:30,317 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 19:32:49] 2025-06-05 23:32:32,821 | INFO     | monitor loop #686: job 0:6668863501 is in state 'finished'
[2025-06-05 19:32:49] 2025-06-05 23:32:32,822 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 19:32:49] 2025-06-05 23:32:35,269 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 19:32:49] 2025-06-05 23:32:35,269 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668863501/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 19:32:49] 2025-06-05 23:32:35,270 | INFO     | extracted standard info from prmon json
[2025-06-05 19:32:49] 2025-06-05 23:32:35,270 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 19:32:49] 2025-06-05 23:32:35,271 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 19:32:49] 2025-06-05 23:32:35,271 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 19:32:49] 2025-06-05 23:32:35,272 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 19:32:49] 2025-06-05 23:32:35,279 | INFO     | fitting pss+swap vs Time
[2025-06-05 19:32:49] 2025-06-05 23:32:35,280 | INFO     | sum of square deviations: 1418375285.4277098
[2025-06-05 19:32:49] 2025-06-05 23:32:35,281 | INFO     | sum of deviations: -5531957815.777105
[2025-06-05 19:32:49] 2025-06-05 23:32:35,281 | INFO     | mean x: 1749161247.6566265
[2025-06-05 19:32:49] 2025-06-05 23:32:35,281 | INFO     | mean y: 2362501.93373494
[2025-06-05 19:32:49] 2025-06-05 23:32:35,281 | INFO     | -- intersect: 6824454182.775898
[2025-06-05 19:32:49] 2025-06-05 23:32:35,281 | INFO     | intersect: 6824454182.775898
[2025-06-05 19:32:49] 2025-06-05 23:32:35,281 | INFO     | chi2: 1.9797722737365857
[2025-06-05 19:32:49] 2025-06-05 23:32:35,282 | INFO     | sum of square deviations: 1294036697.8012483
[2025-06-05 19:32:49] 2025-06-05 23:32:35,289 | INFO     | sum of deviations: -4854124272.049693
[2025-06-05 19:32:49] 2025-06-05 23:32:35,289 | INFO     | mean x: 1749161095.1614907
[2025-06-05 19:32:49] 2025-06-05 23:32:35,289 | INFO     | mean y: 2363323.5403726706
[2025-06-05 19:32:49] 2025-06-05 23:32:35,289 | INFO     | -- intersect: 6563726955.789152
[2025-06-05 19:32:49] 2025-06-05 23:32:35,289 | INFO     | intersect: 6563726955.789152
[2025-06-05 19:32:49] 2025-06-05 23:32:35,289 | INFO     | chi2: 1.9792183611577399
[2025-06-05 19:32:49] 2025-06-05 23:32:35,290 | INFO     | current chi2=1.9792183611577399 (change=0.027978600680188613 %)
[2025-06-05 19:32:49] 2025-06-05 23:32:35,290 | INFO     | right removable region: 160
[2025-06-05 19:32:49] 2025-06-05 23:32:35,290 | INFO     | sum of square deviations: 1294020837.8012483
[2025-06-05 19:32:49] 2025-06-05 23:32:35,291 | INFO     | sum of deviations: -32387356967.54036
[2025-06-05 19:32:49] 2025-06-05 23:32:35,291 | INFO     | mean x: 1749161400.1614907
[2025-06-05 19:32:49] 2025-06-05 23:32:35,291 | INFO     | mean y: 2395086.751552795
[2025-06-05 19:32:49] 2025-06-05 23:32:35,291 | INFO     | -- intersect: 43781222294.1493
[2025-06-05 19:32:49] 2025-06-05 23:32:35,291 | INFO     | intersect: 43781222294.1493
[2025-06-05 19:32:49] 2025-06-05 23:32:35,291 | INFO     | chi2: 0.35356286750158555
[2025-06-05 19:32:49] 2025-06-05 23:32:35,292 | INFO     | current chi2=0.35356286750158555 (change=82.14123552532243 %)
[2025-06-05 19:32:49] 2025-06-05 23:32:35,292 | INFO     | sum of square deviations: 1177154902.6666653
[2025-06-05 19:32:49] 2025-06-05 23:32:35,293 | INFO     | sum of deviations: -26977399587.33332
[2025-06-05 19:32:49] 2025-06-05 23:32:35,294 | INFO     | mean x: 1749161552.6666667
[2025-06-05 19:32:49] 2025-06-05 23:32:35,294 | INFO     | mean y: 2388014.4935897435
[2025-06-05 19:32:49] 2025-06-05 23:32:35,294 | INFO     | -- intersect: 40088726730.14792
[2025-06-05 19:32:49] 2025-06-05 23:32:35,294 | INFO     | intersect: 40088726730.14792
[2025-06-05 19:32:49] 2025-06-05 23:32:35,295 | INFO     | chi2: 0.34463123657893246
[2025-06-05 19:32:49] 2025-06-05 23:32:35,295 | INFO     | current chi2=0.34463123657893246 (change=2.526179003402566 %)
[2025-06-05 19:32:49] 2025-06-05 23:32:35,295 | INFO     | left removable region: 20
[2025-06-05 19:32:49] 2025-06-05 23:32:35,295 | INFO     | sum of square deviations: 850816858.171427
[2025-06-05 19:32:49] 2025-06-05 23:32:35,296 | INFO     | sum of deviations: -13017577398.828568
[2025-06-05 19:32:49] 2025-06-05 23:32:35,296 | INFO     | mean x: 1749161674.6857142
[2025-06-05 19:32:49] 2025-06-05 23:32:35,296 | INFO     | mean y: 2370253.935714286
[2025-06-05 19:32:49] 2025-06-05 23:32:35,296 | INFO     | -- intersect: 26764707253.4902
[2025-06-05 19:32:49] 2025-06-05 23:32:35,296 | INFO     | intersect: 26764707253.4902
[2025-06-05 19:32:49] 2025-06-05 23:32:35,296 | INFO     | chi2: 0.28080263889749396
[2025-06-05 19:32:49] 2025-06-05 23:32:35,296 | INFO     | -- intersect: 26764707253.4902
[2025-06-05 19:32:49] 2025-06-05 23:32:35,296 | INFO     | current memory leak: -15.30 B/s (using 140 data points, chi2=0.28)
[2025-06-05 19:32:49] 2025-06-05 23:32:35,297 | INFO     | ..............................
[2025-06-05 19:32:49] 2025-06-05 23:32:35,297 | INFO     | . Timing measurements:
[2025-06-05 19:32:49] 2025-06-05 23:32:35,297 | INFO     | . get job = 0 s
[2025-06-05 19:32:49] 2025-06-05 23:32:35,297 | INFO     | . initial setup = 3 s
[2025-06-05 19:32:49] 2025-06-05 23:32:35,297 | INFO     | . payload setup = 16 s
[2025-06-05 19:32:49] 2025-06-05 23:32:35,298 | INFO     | . stage-in = 0 s
[2025-06-05 19:32:49] 2025-06-05 23:32:35,298 | INFO     | . payload execution = 10133 s
[2025-06-05 19:32:49] 2025-06-05 23:32:35,298 | INFO     | . stage-out = 1 s
[2025-06-05 19:32:49] 2025-06-05 23:32:35,298 | INFO     | . log creation = 0 s
[2025-06-05 19:32:49] 2025-06-05 23:32:35,298 | INFO     | ..............................
[2025-06-05 19:32:49] 2025-06-05 23:32:35,808 | INFO     | 
[2025-06-05 19:32:49] 2025-06-05 23:32:35,809 | INFO     | job summary report
[2025-06-05 19:32:49] 2025-06-05 23:32:35,809 | INFO     | --------------------------------------------------
[2025-06-05 19:32:49] 2025-06-05 23:32:35,809 | INFO     | PanDA job id: 6668863501
[2025-06-05 19:32:49] 2025-06-05 23:32:35,809 | INFO     | task id: 44871837
[2025-06-05 19:32:49] 2025-06-05 23:32:35,809 | INFO     | errors: (none)
[2025-06-05 19:32:49] 2025-06-05 23:32:35,809 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 19:32:49] 2025-06-05 23:32:35,809 | INFO     | pilot state: finished 
[2025-06-05 19:32:49] 2025-06-05 23:32:35,809 | INFO     | transexitcode: 0
[2025-06-05 19:32:49] 2025-06-05 23:32:35,809 | INFO     | exeerrorcode: 0
[2025-06-05 19:32:49] 2025-06-05 23:32:35,809 | INFO     | exeerrordiag: 
[2025-06-05 19:32:49] 2025-06-05 23:32:35,809 | INFO     | exitcode: 0
[2025-06-05 19:32:49] 2025-06-05 23:32:35,810 | INFO     | exitmsg: OK
[2025-06-05 19:32:49] 2025-06-05 23:32:35,810 | INFO     | cpuconsumptiontime: 52662 s
[2025-06-05 19:32:49] 2025-06-05 23:32:35,810 | INFO     | nevents: 400
[2025-06-05 19:32:49] 2025-06-05 23:32:35,810 | INFO     | neventsw: 0
[2025-06-05 19:32:49] 2025-06-05 23:32:35,810 | INFO     | pid: 1889953
[2025-06-05 19:32:49] 2025-06-05 23:32:35,810 | INFO     | pgrp: 1889953
[2025-06-05 19:32:49] 2025-06-05 23:32:35,810 | INFO     | corecount: 12
[2025-06-05 19:32:49] 2025-06-05 23:32:35,810 | INFO     | event service: False
[2025-06-05 19:32:49] 2025-06-05 23:32:35,810 | INFO     | sizes: {0: 2397392, 1: 2397420, 11: 2397420, 13: 2397654, 22: 2397710, 10153: 2426506, 10154: 2435447, 10157: 2435503, 10169: 2435673}
[2025-06-05 19:32:49] 2025-06-05 23:32:35,810 | INFO     | --------------------------------------------------
[2025-06-05 19:32:49] 2025-06-05 23:32:35,810 | INFO     | 
[2025-06-05 19:32:49] 2025-06-05 23:32:35,810 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 19:32:49] 2025-06-05 23:32:35,874 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 19:32:49] 2025-06-05 23:32:35,874 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 19:32:49] 2025-06-05 23:32:35,874 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 19:32:49] 2025-06-05 23:32:35,874 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 19:32:49] 2025-06-05 23:32:35,874 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 19:32:49] 2025-06-05 23:32:35,874 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 19:32:49] 2025-06-05 23:32:35,875 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 19:32:49] 2025-06-05 23:32:35,875 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 19:32:49] 2025-06-05 23:32:35,875 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 19:32:49] 2025-06-05 23:32:35,875 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 19:32:49] 2025-06-05 23:32:35,875 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 19:32:49] 2025-06-05 23:32:35,875 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 19:32:49] 2025-06-05 23:32:35,875 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 19:32:49] 2025-06-05 23:32:35,875 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 19:32:49] 2025-06-05 23:32:35,876 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 19:32:49] 2025-06-05 23:32:35,876 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 19:32:49] 2025-06-05 23:32:35,876 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 19:32:49] 2025-06-05 23:32:35,876 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 19:32:49] 2025-06-05 23:32:35,876 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 19:32:49] 2025-06-05 23:32:35,876 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 19:32:49] 2025-06-05 23:32:35,876 | INFO     | job 6668863501 has completed (purged errors)
[2025-06-05 19:32:49] 2025-06-05 23:32:35,876 | INFO     | overall cleanup function is called
[2025-06-05 19:32:49] 2025-06-05 23:32:36,886 | INFO     | --- collectZombieJob: --- 10, [1889953]
[2025-06-05 19:32:49] 2025-06-05 23:32:36,887 | INFO     | zombie collector waiting for pid 1889953
[2025-06-05 19:32:49] 2025-06-05 23:32:36,887 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 19:32:49] 2025-06-05 23:32:36,887 | INFO     | collected zombie processes
[2025-06-05 19:32:49] 2025-06-05 23:32:36,887 | INFO     | will attempt to kill all subprocesses of pid=1889953
[2025-06-05 19:32:49] 2025-06-05 23:32:37,255 | INFO     | process IDs to be killed: [1889953] (in reverse order)
[2025-06-05 19:32:49] 2025-06-05 23:32:37,362 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 19:32:49] 2025-06-05 23:32:37,362 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 19:32:49] 2025-06-05 23:32:37,381 | INFO     | did not find any defunct processes belonging to 1889953
[2025-06-05 19:32:49] 2025-06-05 23:32:37,402 | INFO     | did not find any defunct processes belonging to 1889953
[2025-06-05 19:32:49] 2025-06-05 23:32:37,402 | INFO     | ready for new job
[2025-06-05 19:32:49] 2025-06-05 23:32:37,403 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 19:32:49] 2025-06-05 23:32:37,405 | INFO     | **************************************
[2025-06-05 19:32:49] 2025-06-05 23:32:37,405 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 19:32:49] 2025-06-05 23:32:37,405 | INFO     | **************************************
[2025-06-05 19:32:49] 2025-06-05 23:32:37,405 | INFO     | 
[2025-06-05 19:32:49] 2025-06-05 23:32:37,423 | INFO     | architecture information:
[2025-06-05 19:32:49] 2025-06-05 23:32:37,424 | INFO     | executing command: cat /etc/os-release
[2025-06-05 19:32:49] 2025-06-05 23:32:37,442 | INFO     | cat /etc/os-release:
[2025-06-05 19:32:49] NAME="CentOS Linux"
[2025-06-05 19:32:49] VERSION="7 (Core)"
[2025-06-05 19:32:49] ID="centos"
[2025-06-05 19:32:49] ID_LIKE="rhel fedora"
[2025-06-05 19:32:49] VERSION_ID="7"
[2025-06-05 19:32:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 19:32:49] ANSI_COLOR="0;31"
[2025-06-05 19:32:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 19:32:49] HOME_URL="https://www.centos.org/"
[2025-06-05 19:32:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 19:32:49] 
[2025-06-05 19:32:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 19:32:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 19:32:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 19:32:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 19:32:49] 
[2025-06-05 19:32:49] 2025-06-05 23:32:37,443 | INFO     | **************************************
[2025-06-05 19:32:49] 2025-06-05 23:32:37,947 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 19:32:49] 2025-06-05 23:32:37,970 | INFO     | sufficient remaining disk space (76548145152 B)
[2025-06-05 19:32:49] 2025-06-05 23:32:37,971 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 19:32:49] 2025-06-05 23:32:37,971 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 19:32:49] 2025-06-05 23:32:37,971 | INFO     | update_server=False
[2025-06-05 19:32:49] 2025-06-05 23:32:37,971 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 19:32:49] 2025-06-05 23:32:37,972 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 19:32:49] 2025-06-05 23:32:37,972 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 19:32:49] 2025-06-05 23:32:37,973 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 19:32:49] 2025-06-05 23:32:37,973 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 19:32:49] 2025-06-05 23:32:38,117 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 19:32:49] 2025-06-05 23:32:38,448 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 19:32:49] 2025-06-05 23:32:38,705 | INFO     | all job control threads have been joined
[2025-06-05 19:32:49] 2025-06-05 23:32:38,766 | INFO     | all data control threads have been joined
[2025-06-05 19:32:49] 2025-06-05 23:32:38,846 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 19:32:49] 2025-06-05 23:32:38,847 | INFO     | aborting loop
[2025-06-05 19:32:49] 2025-06-05 23:32:38,978 | INFO     | [job] retrieve thread has finished
[2025-06-05 19:32:49] 2025-06-05 23:32:39,102 | INFO     | all payload control threads have been joined
[2025-06-05 19:32:49] 2025-06-05 23:32:39,204 | INFO     | [payload] failed_post thread has finished
[2025-06-05 19:32:49] 2025-06-05 23:32:39,374 | INFO     | [payload] validate_post thread has finished
[2025-06-05 19:32:49] 2025-06-05 23:32:39,421 | INFO     | [data] copytool_in thread has finished
[2025-06-05 19:32:49] 2025-06-05 23:32:39,619 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 19:32:49] 2025-06-05 23:32:39,711 | INFO     | [job] control thread has finished
[2025-06-05 19:32:49] 2025-06-05 23:32:39,772 | INFO     | [data] control thread has finished
[2025-06-05 19:32:49] 2025-06-05 23:32:39,814 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 19:32:49] 2025-06-05 23:32:39,853 | INFO     | [job] job monitor thread has finished
[2025-06-05 19:32:49] 2025-06-05 23:32:39,996 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 19:32:49] 2025-06-05 23:32:40,108 | INFO     | [payload] control thread has finished
[2025-06-05 19:32:49] 2025-06-05 23:32:40,284 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 19:32:49] 2025-06-05 23:32:40,341 | INFO     | [job] validate thread has finished
[2025-06-05 19:32:49] 2025-06-05 23:32:40,413 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 19:32:49] 2025-06-05 23:32:40,455 | INFO     | [data] copytool_out thread has finished
[2025-06-05 19:32:49] 2025-06-05 23:32:41,419 | INFO     | [job] queue monitor thread has finished
[2025-06-05 19:32:49] 2025-06-05 23:32:42,126 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 19:32:49] 2025-06-05 23:32:43,772 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139641478518592)>', '<ExcThread(monitor, started 139640828835584)>']
[2025-06-05 19:32:49] 2025-06-05 23:32:44,009 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 19:32:49] 2025-06-05 23:32:44,010 | INFO     | [monitor] control thread has ended
[2025-06-05 19:32:49] 2025-06-05 23:32:48,798 | INFO     | all workflow threads have been joined
[2025-06-05 19:32:49] 2025-06-05 23:32:48,799 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 19:32:49] 2025-06-05 23:32:48,800 | INFO     | traces error code: 0
[2025-06-05 19:32:49] 2025-06-05 23:32:48,800 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 19:32:49] 2025-06-05 23:32:48,972 [wrapper] ==== pilot stdout END ====
[2025-06-05 19:32:49] 2025-06-05 23:32:48,979 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 19:32:49] 2025-06-05 23:32:48,982 [wrapper] pilotpid: 1881212
[2025-06-05 19:32:49] 2025-06-05 23:32:48,984 [wrapper] Pilot exit status: 0
[2025-06-05 19:32:49] 2025-06-05 23:32:49,001 [wrapper] pandaids: 6668863501
[2025-06-05 19:32:49] 2025-06-05 23:32:49,070 [wrapper] cleanup supervisor_pilot 2516454 1881213
[2025-06-05 19:32:49] 2025-06-05 23:32:49,093 [wrapper] Test setup, not cleaning
[2025-06-05 19:32:49] 2025-06-05 23:32:49,096 [wrapper] apfmon messages muted
[2025-06-05 19:32:49] 2025-06-05 23:32:49,103 [wrapper] ==== wrapper stdout END ====
[2025-06-05 19:32:49] 2025-06-05 23:32:49,105 [wrapper] ==== wrapper stderr END ====
[2025-06-05 19:32:49]  *** Error codes and diagnostics ***
[2025-06-05 19:32:49]     "exeErrorCode": 0,
[2025-06-05 19:32:49]     "exeErrorDiag": "",
[2025-06-05 19:32:49]     "pilotErrorCode": 0,
[2025-06-05 19:32:49]     "pilotErrorDiag": "",
[2025-06-05 19:32:49]  *** Listing of results directory ***
[2025-06-05 19:32:49] total 418852
[2025-06-05 19:32:49] -rw-r--r--. 1 boincer umatlas    495897 May 28 15:50 pilot3.tar.gz
[2025-06-05 19:32:49] -rwx------. 1 boincer umatlas     37140 May 28 16:10 runpilot2-wrapper.sh
[2025-06-05 19:32:49] -rw-r--r--. 1 boincer umatlas      5111 May 28 16:10 queuedata.json
[2025-06-05 19:32:49] -rw-r--r--. 1 boincer umatlas       100 Jun  5 16:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 19:32:49] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 16:41 run_atlas
[2025-06-05 19:32:49] -rw-r--r--. 1 boincer umatlas       105 Jun  5 16:41 job.xml
[2025-06-05 19:32:49] -rw-r--r--. 2 boincer umatlas 224143146 Jun  5 16:41 EVNT.44871834._003498.pool.root.1
[2025-06-05 19:32:49] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 16:41 start_atlas.sh
[2025-06-05 19:32:49] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 16:41 shared
[2025-06-05 19:32:49] -rw-r--r--. 2 boincer umatlas    508875 Jun  5 16:41 input.tar.gz
[2025-06-05 19:32:49] -rw-r--r--. 1 boincer umatlas         0 Jun  5 16:41 boinc_lockfile
[2025-06-05 19:32:49] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 16:42 pandaJob.out
[2025-06-05 19:32:49] -rw-------. 1 boincer umatlas    987599 Jun  5 16:42 agis_schedconf.cvmfs.json
[2025-06-05 19:32:49] -rw-------. 1 boincer umatlas   1598969 Jun  5 16:42 agis_ddmendpoints.agis.ALL.json
[2025-06-05 19:32:49] drwx------. 4 boincer umatlas      4096 Jun  5 16:42 pilot3
[2025-06-05 19:32:49] -rw-r--r--. 1 boincer umatlas      6841 Jun  5 19:27 init_data.xml
[2025-06-05 19:32:49] -rw-------. 1 boincer umatlas 198280290 Jun  5 19:31 HITS.44871837._089904.pool.root.1
[2025-06-05 19:32:49] -rw-------. 1 boincer umatlas        95 Jun  5 19:31 pilot_heartbeat.json
[2025-06-05 19:32:49] -rw-r--r--. 1 boincer umatlas       531 Jun  5 19:31 boinc_task_state.xml
[2025-06-05 19:32:49] -rw-------. 1 boincer umatlas      1043 Jun  5 19:32 memory_monitor_summary.json
[2025-06-05 19:32:49] -rw-------. 1 boincer umatlas    419472 Jun  5 19:32 log.44871837._089904.job.log.tgz.1
[2025-06-05 19:32:49] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 19:32 boinc_mmap_file
[2025-06-05 19:32:49] -rw-r--r--. 1 boincer umatlas        28 Jun  5 19:32 wrapper_checkpoint.txt
[2025-06-05 19:32:49] -rw-------. 1 boincer umatlas      7726 Jun  5 19:32 heartbeat.json
[2025-06-05 19:32:49] -rw-------. 1 boincer umatlas      4476 Jun  5 19:32 pilotlog.txt
[2025-06-05 19:32:49] -rw-------. 1 boincer umatlas    904075 Jun  5 19:32 log.44871837._089904.job.log.1
[2025-06-05 19:32:49] -rw-------. 1 boincer umatlas       357 Jun  5 19:32 output.list
[2025-06-05 19:32:49] -rw-r--r--. 1 boincer umatlas       620 Jun  5 19:32 runtime_log
[2025-06-05 19:32:49] -rw-------. 1 boincer umatlas   1341440 Jun  5 19:32 result.tar.gz
[2025-06-05 19:32:49] -rw-r--r--. 1 boincer umatlas      8667 Jun  5 19:32 runtime_log.err
[2025-06-05 19:32:49] -rw-------. 1 boincer umatlas       656 Jun  5 19:32 HW1NDmIHce7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmf1cKDmFXlLPo.diag
[2025-06-05 19:32:49] -rw-r--r--. 1 boincer umatlas     21174 Jun  5 19:32 stderr.txt
[2025-06-05 19:32:49] HITS file was successfully produced:
[2025-06-05 19:32:49] -rw-------. 1 boincer umatlas 198280290 Jun  5 19:31 shared/HITS.pool.root.1
[2025-06-05 19:32:49]  *** Contents of shared directory: ***
[2025-06-05 19:32:49] total 414360
[2025-06-05 19:32:49] -rw-r--r--. 2 boincer umatlas 224143146 Jun  5 16:41 ATLAS.root_0
[2025-06-05 19:32:49] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 16:41 start_atlas.sh
[2025-06-05 19:32:49] -rw-r--r--. 2 boincer umatlas    508875 Jun  5 16:41 input.tar.gz
[2025-06-05 19:32:49] -rw-------. 1 boincer umatlas 198280290 Jun  5 19:31 HITS.pool.root.1
[2025-06-05 19:32:49] -rw-------. 1 boincer umatlas   1341440 Jun  5 19:32 result.tar.gz
19:32:50 (1877356): run_atlas exited; CPU time 52866.988426
19:32:50 (1877356): called boinc_finish(0)

</stderr_txt>
]]>

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