Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:08:38 (3956391): wrapper (7.7.26015): starting
15:08:38 (3956391): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 15:08:38] Arguments: --nthreads 8
[2025-06-05 15:08:38] Threads: 8
[2025-06-05 15:08:38] Checking for CVMFS
[2025-06-05 15:08:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 15:08:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 15:08:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 15:08:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 15:08:39] 2.12.6.0 1685548 25135 460868 146829 2 519 17092366 32947200 19459 16776704 0 128450832 99.693 99448007 27539 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 15:08:39] CVMFS is ok
[2025-06-05 15:08:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 15:08:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 15:08:39] Further information can be found at the LHC@home message board.
[2025-06-05 15:08:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 15:08:39] Checking for apptainer binary...
[2025-06-05 15:08:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 15:08:39] Running /usr/bin/apptainer --version
[2025-06-05 15:08:40] apptainer version 1.4.1-1.el9
[2025-06-05 15:08:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 15:08:40] c6-6-8-2.aglt2.org
[2025-06-05 15:08:40] apptainer works
[2025-06-05 15:08:40] Set ATHENA_PROC_NUMBER=8
[2025-06-05 15:08:40] Set ATHENA_CORE_NUMBER=8
[2025-06-05 15:08:40] Starting ATLAS job with PandaID=6670271425
[2025-06-05 15:08:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 18:01:23]  *** The last 200 lines of the pilot log: ***
[2025-06-05 18:01:23] 2025-06-05 22:01:09,476 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6670271425/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 18:01:23] 2025-06-05 22:01:09,477 | INFO     | extracted standard info from prmon json
[2025-06-05 18:01:23] 2025-06-05 22:01:09,477 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 18:01:23] 2025-06-05 22:01:09,477 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 18:01:23] 2025-06-05 22:01:09,478 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 18:01:23] 2025-06-05 22:01:09,479 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 18:01:23] 2025-06-05 22:01:09,483 | INFO     | fitting pss+swap vs Time
[2025-06-05 18:01:23] 2025-06-05 22:01:09,484 | INFO     | sum of square deviations: 1496655252.9940875
[2025-06-05 18:01:23] 2025-06-05 22:01:09,484 | INFO     | sum of deviations: 8008087413.946739
[2025-06-05 18:01:23] 2025-06-05 22:01:09,485 | INFO     | mean x: 1749155711.005917
[2025-06-05 18:01:23] 2025-06-05 22:01:09,485 | INFO     | mean y: 2163444.053254438
[2025-06-05 18:01:23] 2025-06-05 22:01:09,487 | INFO     | -- intersect: -9356967061.330324
[2025-06-05 18:01:23] 2025-06-05 22:01:09,487 | INFO     | intersect: -9356967061.330324
[2025-06-05 18:01:23] 2025-06-05 22:01:09,488 | INFO     | chi2: 2.1179999437495125
[2025-06-05 18:01:23] 2025-06-05 22:01:09,488 | INFO     | sum of square deviations: 1367704302.9939044
[2025-06-05 18:01:23] 2025-06-05 22:01:09,489 | INFO     | sum of deviations: 16531361594.353636
[2025-06-05 18:01:23] 2025-06-05 22:01:09,489 | INFO     | mean x: 1749155558.5060976
[2025-06-05 18:01:23] 2025-06-05 22:01:09,489 | INFO     | mean y: 2173250.6463414636
[2025-06-05 18:01:23] 2025-06-05 22:01:09,489 | INFO     | -- intersect: -21139767269.05586
[2025-06-05 18:01:23] 2025-06-05 22:01:09,489 | INFO     | intersect: -21139767269.05586
[2025-06-05 18:01:23] 2025-06-05 22:01:09,489 | INFO     | chi2: 1.4506332646697104
[2025-06-05 18:01:23] 2025-06-05 22:01:09,490 | INFO     | current chi2=1.4506332646697104 (change=31.509286912366836 %)
[2025-06-05 18:01:23] 2025-06-05 22:01:09,490 | INFO     | sum of square deviations: 1246381402.9937139
[2025-06-05 18:01:23] 2025-06-05 22:01:09,491 | INFO     | sum of deviations: 15548779291.452818
[2025-06-05 18:01:23] 2025-06-05 22:01:09,491 | INFO     | mean x: 1749155406.0062892
[2025-06-05 18:01:23] 2025-06-05 22:01:09,492 | INFO     | mean y: 2172006.547169811
[2025-06-05 18:01:23] 2025-06-05 22:01:09,492 | INFO     | -- intersect: -21818782068.27908
[2025-06-05 18:01:23] 2025-06-05 22:01:09,492 | INFO     | intersect: -21818782068.27908
[2025-06-05 18:01:23] 2025-06-05 22:01:09,492 | INFO     | chi2: 1.451062803501466
[2025-06-05 18:01:23] 2025-06-05 22:01:09,492 | INFO     | current chi2=1.451062803501466 (change=-0.029610435815662313 %)
[2025-06-05 18:01:23] 2025-06-05 22:01:09,492 | INFO     | right removable region: 158
[2025-06-05 18:01:23] 2025-06-05 22:01:09,492 | INFO     | sum of square deviations: 1367703692.9939044
[2025-06-05 18:01:23] 2025-06-05 22:01:09,493 | INFO     | sum of deviations: -13271464065.969517
[2025-06-05 18:01:23] 2025-06-05 22:01:09,493 | INFO     | mean x: 1749155863.5060976
[2025-06-05 18:01:23] 2025-06-05 22:01:09,493 | INFO     | mean y: 2188254.4695121953
[2025-06-05 18:01:23] 2025-06-05 22:01:09,494 | INFO     | -- intersect: 16975059869.289753
[2025-06-05 18:01:23] 2025-06-05 22:01:09,494 | INFO     | intersect: 16975059869.289753
[2025-06-05 18:01:23] 2025-06-05 22:01:09,494 | INFO     | chi2: 0.7606003619676126
[2025-06-05 18:01:23] 2025-06-05 22:01:09,494 | INFO     | current chi2=0.7606003619676126 (change=64.08874494013841 %)
[2025-06-05 18:01:23] 2025-06-05 22:01:09,494 | INFO     | sum of square deviations: 1246380182.9937139
[2025-06-05 18:01:23] 2025-06-05 22:01:09,496 | INFO     | sum of deviations: -14667310928.257862
[2025-06-05 18:01:23] 2025-06-05 22:01:09,496 | INFO     | mean x: 1749156016.0062892
[2025-06-05 18:01:23] 2025-06-05 22:01:09,496 | INFO     | mean y: 2190020.257861635
[2025-06-05 18:01:23] 2025-06-05 22:01:09,496 | INFO     | -- intersect: 20586130216.71911
[2025-06-05 18:01:23] 2025-06-05 22:01:09,496 | INFO     | intersect: 20586130216.71911
[2025-06-05 18:01:23] 2025-06-05 22:01:09,497 | INFO     | chi2: 0.7515026685062898
[2025-06-05 18:01:23] 2025-06-05 22:01:09,497 | INFO     | current chi2=0.7515026685062898 (change=1.1961200541356334 %)
[2025-06-05 18:01:23] 2025-06-05 22:01:09,497 | INFO     | left removable region: 20
[2025-06-05 18:01:23] 2025-06-05 22:01:09,497 | INFO     | sum of square deviations: 814872618.4927523
[2025-06-05 18:01:23] 2025-06-05 22:01:09,498 | INFO     | sum of deviations: -5605234504.289856
[2025-06-05 18:01:23] 2025-06-05 22:01:09,498 | INFO     | mean x: 1749155985.5072465
[2025-06-05 18:01:23] 2025-06-05 22:01:09,498 | INFO     | mean y: 2199664.2898550723
[2025-06-05 18:01:23] 2025-06-05 22:01:09,498 | INFO     | -- intersect: 12034055025.297483
[2025-06-05 18:01:23] 2025-06-05 22:01:09,498 | INFO     | intersect: 12034055025.297483
[2025-06-05 18:01:23] 2025-06-05 22:01:09,498 | INFO     | chi2: 0.057703177684518485
[2025-06-05 18:01:23] 2025-06-05 22:01:09,498 | INFO     | -- intersect: 12034055025.297483
[2025-06-05 18:01:23] 2025-06-05 22:01:09,499 | INFO     | current memory leak: -6.88 B/s (using 138 data points, chi2=0.06)
[2025-06-05 18:01:23] 2025-06-05 22:01:09,500 | INFO     | ..............................
[2025-06-05 18:01:23] 2025-06-05 22:01:09,500 | INFO     | . Timing measurements:
[2025-06-05 18:01:23] 2025-06-05 22:01:09,500 | INFO     | . get job = 0 s
[2025-06-05 18:01:23] 2025-06-05 22:01:09,500 | INFO     | . initial setup = 3 s
[2025-06-05 18:01:23] 2025-06-05 22:01:09,500 | INFO     | . payload setup = 10 s
[2025-06-05 18:01:23] 2025-06-05 22:01:09,500 | INFO     | . stage-in = 0 s
[2025-06-05 18:01:23] 2025-06-05 22:01:09,500 | INFO     | . payload execution = 10282 s
[2025-06-05 18:01:23] 2025-06-05 22:01:09,500 | INFO     | . stage-out = 0 s
[2025-06-05 18:01:23] 2025-06-05 22:01:09,500 | INFO     | . log creation = 0 s
[2025-06-05 18:01:23] 2025-06-05 22:01:09,501 | INFO     | ..............................
[2025-06-05 18:01:23] 2025-06-05 22:01:09,642 | INFO     | 
[2025-06-05 18:01:23] 2025-06-05 22:01:09,642 | INFO     | job summary report
[2025-06-05 18:01:23] 2025-06-05 22:01:09,642 | INFO     | --------------------------------------------------
[2025-06-05 18:01:23] 2025-06-05 22:01:09,642 | INFO     | PanDA job id: 6670271425
[2025-06-05 18:01:23] 2025-06-05 22:01:09,642 | INFO     | task id: 44871837
[2025-06-05 18:01:23] 2025-06-05 22:01:09,642 | INFO     | errors: (none)
[2025-06-05 18:01:23] 2025-06-05 22:01:09,642 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 18:01:23] 2025-06-05 22:01:09,643 | INFO     | pilot state: finished 
[2025-06-05 18:01:23] 2025-06-05 22:01:09,643 | INFO     | transexitcode: 0
[2025-06-05 18:01:23] 2025-06-05 22:01:09,643 | INFO     | exeerrorcode: 0
[2025-06-05 18:01:23] 2025-06-05 22:01:09,643 | INFO     | exeerrordiag: 
[2025-06-05 18:01:23] 2025-06-05 22:01:09,643 | INFO     | exitcode: 0
[2025-06-05 18:01:23] 2025-06-05 22:01:09,643 | INFO     | exitmsg: OK
[2025-06-05 18:01:23] 2025-06-05 22:01:09,643 | INFO     | cpuconsumptiontime: 55757 s
[2025-06-05 18:01:23] 2025-06-05 22:01:09,643 | INFO     | nevents: 400
[2025-06-05 18:01:23] 2025-06-05 22:01:09,643 | INFO     | neventsw: 0
[2025-06-05 18:01:23] 2025-06-05 22:01:09,643 | INFO     | pid: 3966964
[2025-06-05 18:01:23] 2025-06-05 22:01:09,643 | INFO     | pgrp: 3966964
[2025-06-05 18:01:23] 2025-06-05 22:01:09,643 | INFO     | corecount: 8
[2025-06-05 18:01:23] 2025-06-05 22:01:09,643 | INFO     | event service: False
[2025-06-05 18:01:23] 2025-06-05 22:01:09,643 | INFO     | sizes: {0: 2397120, 1: 2397319, 7: 2397525, 12: 2397553, 10297: 2426276, 10298: 2435217, 10301: 2435401, 10306: 2435571}
[2025-06-05 18:01:23] 2025-06-05 22:01:09,643 | INFO     | --------------------------------------------------
[2025-06-05 18:01:23] 2025-06-05 22:01:09,643 | INFO     | 
[2025-06-05 18:01:23] 2025-06-05 22:01:09,644 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 18:01:23] 2025-06-05 22:01:09,674 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 18:01:23] 2025-06-05 22:01:09,674 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 18:01:23] 2025-06-05 22:01:09,674 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 18:01:23] 2025-06-05 22:01:09,674 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 18:01:23] 2025-06-05 22:01:09,674 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 18:01:23] 2025-06-05 22:01:09,675 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 18:01:23] 2025-06-05 22:01:09,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 18:01:23] 2025-06-05 22:01:09,675 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 18:01:23] 2025-06-05 22:01:09,675 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 18:01:23] 2025-06-05 22:01:09,675 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 18:01:23] 2025-06-05 22:01:09,675 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 18:01:23] 2025-06-05 22:01:09,675 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 18:01:23] 2025-06-05 22:01:09,675 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 18:01:23] 2025-06-05 22:01:09,675 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 18:01:23] 2025-06-05 22:01:09,675 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 18:01:23] 2025-06-05 22:01:09,675 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 18:01:23] 2025-06-05 22:01:09,675 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 18:01:23] 2025-06-05 22:01:09,675 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 18:01:23] 2025-06-05 22:01:09,676 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 18:01:23] 2025-06-05 22:01:09,676 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 18:01:23] 2025-06-05 22:01:09,676 | INFO     | job 6670271425 has completed (purged errors)
[2025-06-05 18:01:23] 2025-06-05 22:01:09,676 | INFO     | overall cleanup function is called
[2025-06-05 18:01:23] 2025-06-05 22:01:10,684 | INFO     | --- collectZombieJob: --- 10, [3966964]
[2025-06-05 18:01:23] 2025-06-05 22:01:10,684 | INFO     | zombie collector waiting for pid 3966964
[2025-06-05 18:01:23] 2025-06-05 22:01:10,684 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 18:01:23] 2025-06-05 22:01:10,685 | INFO     | collected zombie processes
[2025-06-05 18:01:23] 2025-06-05 22:01:10,685 | INFO     | will attempt to kill all subprocesses of pid=3966964
[2025-06-05 18:01:23] 2025-06-05 22:01:11,035 | INFO     | process IDs to be killed: [3966964] (in reverse order)
[2025-06-05 18:01:23] 2025-06-05 22:01:11,145 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 18:01:23] 2025-06-05 22:01:11,145 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 18:01:23] 2025-06-05 22:01:11,160 | INFO     | did not find any defunct processes belonging to 3966964
[2025-06-05 18:01:23] 2025-06-05 22:01:11,174 | INFO     | did not find any defunct processes belonging to 3966964
[2025-06-05 18:01:23] 2025-06-05 22:01:11,175 | INFO     | ready for new job
[2025-06-05 18:01:23] 2025-06-05 22:01:11,175 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 18:01:23] 2025-06-05 22:01:11,177 | INFO     | **************************************
[2025-06-05 18:01:23] 2025-06-05 22:01:11,177 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 18:01:23] 2025-06-05 22:01:11,177 | INFO     | **************************************
[2025-06-05 18:01:23] 2025-06-05 22:01:11,178 | INFO     | 
[2025-06-05 18:01:23] 2025-06-05 22:01:11,196 | INFO     | architecture information:
[2025-06-05 18:01:23] 2025-06-05 22:01:11,196 | INFO     | executing command: cat /etc/os-release
[2025-06-05 18:01:23] 2025-06-05 22:01:11,216 | INFO     | cat /etc/os-release:
[2025-06-05 18:01:23] NAME="CentOS Linux"
[2025-06-05 18:01:23] VERSION="7 (Core)"
[2025-06-05 18:01:23] ID="centos"
[2025-06-05 18:01:23] ID_LIKE="rhel fedora"
[2025-06-05 18:01:23] VERSION_ID="7"
[2025-06-05 18:01:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 18:01:23] ANSI_COLOR="0;31"
[2025-06-05 18:01:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 18:01:23] HOME_URL="https://www.centos.org/"
[2025-06-05 18:01:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 18:01:23] 
[2025-06-05 18:01:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 18:01:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 18:01:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 18:01:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 18:01:23] 
[2025-06-05 18:01:23] 2025-06-05 22:01:11,216 | INFO     | **************************************
[2025-06-05 18:01:23] 2025-06-05 22:01:11,718 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 18:01:23] 2025-06-05 22:01:11,742 | INFO     | sufficient remaining disk space (76119277568 B)
[2025-06-05 18:01:23] 2025-06-05 22:01:11,743 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 18:01:23] 2025-06-05 22:01:11,743 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 18:01:23] 2025-06-05 22:01:11,743 | INFO     | update_server=False
[2025-06-05 18:01:23] 2025-06-05 22:01:11,743 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 18:01:23] 2025-06-05 22:01:11,743 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 18:01:23] 2025-06-05 22:01:11,743 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 18:01:23] 2025-06-05 22:01:11,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 18:01:23] 2025-06-05 22:01:11,743 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 18:01:23] 2025-06-05 22:01:11,743 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 18:01:23] 2025-06-05 22:01:11,744 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:01:23] 2025-06-05 22:01:11,744 | INFO     | aborting loop
[2025-06-05 18:01:23] 2025-06-05 22:01:12,406 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 18:01:23] 2025-06-05 22:01:12,748 | INFO     | [job] retrieve thread has finished
[2025-06-05 18:01:23] 2025-06-05 22:01:12,749 | INFO     | [job] job monitor thread has finished
[2025-06-05 18:01:23] 2025-06-05 22:01:12,773 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 18:01:23] 2025-06-05 22:01:12,780 | INFO     | all data control threads have been joined
[2025-06-05 18:01:23] 2025-06-05 22:01:12,803 | INFO     | [job] validate thread has finished
[2025-06-05 18:01:23] 2025-06-05 22:01:12,932 | INFO     | all payload control threads have been joined
[2025-06-05 18:01:23] 2025-06-05 22:01:13,130 | INFO     | [payload] validate_post thread has finished
[2025-06-05 18:01:23] 2025-06-05 22:01:13,152 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 18:01:23] 2025-06-05 22:01:13,337 | INFO     | all job control threads have been joined
[2025-06-05 18:01:23] 2025-06-05 22:01:13,620 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 18:01:23] 2025-06-05 22:01:13,785 | INFO     | [data] control thread has finished
[2025-06-05 18:01:23] 2025-06-05 22:01:13,836 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 18:01:23] 2025-06-05 22:01:13,937 | INFO     | [payload] control thread has finished
[2025-06-05 18:01:23] 2025-06-05 22:01:13,972 | INFO     | [payload] failed_post thread has finished
[2025-06-05 18:01:23] 2025-06-05 22:01:14,216 | INFO     | [data] copytool_in thread has finished
[2025-06-05 18:01:23] 2025-06-05 22:01:14,342 | INFO     | [job] control thread has finished
[2025-06-05 18:01:23] 2025-06-05 22:01:14,411 | INFO     | [data] copytool_out thread has finished
[2025-06-05 18:01:23] 2025-06-05 22:01:14,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:01:23] 2025-06-05 22:01:15,621 | INFO     | [job] queue monitor thread has finished
[2025-06-05 18:01:23] 2025-06-05 22:01:15,750 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 18:01:23] 2025-06-05 22:01:17,709 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139691016709952)>', '<ExcThread(monitor, started 139690743142144)>']
[2025-06-05 18:01:23] 2025-06-05 22:01:17,777 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 18:01:23] 2025-06-05 22:01:17,777 | INFO     | [monitor] control thread has ended
[2025-06-05 18:01:23] 2025-06-05 22:01:22,735 | INFO     | all workflow threads have been joined
[2025-06-05 18:01:23] 2025-06-05 22:01:22,735 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 18:01:23] 2025-06-05 22:01:22,735 | INFO     | traces error code: 0
[2025-06-05 18:01:23] 2025-06-05 22:01:22,736 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 18:01:23] 2025-06-05 22:01:22,945 [wrapper] ==== pilot stdout END ====
[2025-06-05 18:01:23] 2025-06-05 22:01:22,948 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 18:01:23] 2025-06-05 22:01:22,951 [wrapper] pilotpid: 3959984
[2025-06-05 18:01:23] 2025-06-05 22:01:22,954 [wrapper] Pilot exit status: 0
[2025-06-05 18:01:23] 2025-06-05 22:01:22,976 [wrapper] pandaids: 6670271425
[2025-06-05 18:01:23] 2025-06-05 22:01:23,046 [wrapper] cleanup supervisor_pilot  105505 3959985
[2025-06-05 18:01:23] 2025-06-05 22:01:23,050 [wrapper] Test setup, not cleaning
[2025-06-05 18:01:23] 2025-06-05 22:01:23,054 [wrapper] apfmon messages muted
[2025-06-05 18:01:23] 2025-06-05 22:01:23,058 [wrapper] ==== wrapper stdout END ====
[2025-06-05 18:01:23] 2025-06-05 22:01:23,062 [wrapper] ==== wrapper stderr END ====
[2025-06-05 18:01:23]  *** Error codes and diagnostics ***
[2025-06-05 18:01:23]     "exeErrorCode": 0,
[2025-06-05 18:01:23]     "exeErrorDiag": "",
[2025-06-05 18:01:23]     "pilotErrorCode": 0,
[2025-06-05 18:01:23]     "pilotErrorDiag": "",
[2025-06-05 18:01:23]  *** Listing of results directory ***
[2025-06-05 18:01:23] total 414316
[2025-06-05 18:01:23] -rw-r--r-- 1 boincer umatlas      5111 May 29 06:07 queuedata.json
[2025-06-05 18:01:23] -rw-r--r-- 1 boincer umatlas    495897 May 29 06:07 pilot3.tar.gz
[2025-06-05 18:01:23] -rwx------ 1 boincer umatlas     37140 May 29 06:08 runpilot2-wrapper.sh
[2025-06-05 18:01:23] -rw-r--r-- 1 boincer umatlas       100 Jun  5 15:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 18:01:23] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 15:08 run_atlas
[2025-06-05 18:01:23] -rw-r--r-- 1 boincer umatlas       105 Jun  5 15:08 job.xml
[2025-06-05 18:01:23] -rw-r--r-- 2 boincer umatlas 224860721 Jun  5 15:08 EVNT.44871834._002635.pool.root.1
[2025-06-05 18:01:23] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 15:08 start_atlas.sh
[2025-06-05 18:01:23] drwxrwx--x 2 boincer umatlas      4096 Jun  5 15:08 shared
[2025-06-05 18:01:23] -rw-r--r-- 2 boincer umatlas    508884 Jun  5 15:08 input.tar.gz
[2025-06-05 18:01:23] -rw-r--r-- 1 boincer umatlas         0 Jun  5 15:08 boinc_lockfile
[2025-06-05 18:01:23] -rw-r--r-- 1 boincer umatlas      2558 Jun  5 15:08 pandaJob.out
[2025-06-05 18:01:23] -rw------- 1 boincer umatlas    987543 Jun  5 15:08 agis_schedconf.cvmfs.json
[2025-06-05 18:01:23] -rw------- 1 boincer umatlas   1598969 Jun  5 15:08 agis_ddmendpoints.agis.ALL.json
[2025-06-05 18:01:23] drwx------ 4 boincer umatlas      4096 Jun  5 15:09 pilot3
[2025-06-05 18:01:23] -rw-r--r-- 1 boincer umatlas      6857 Jun  5 17:56 init_data.xml
[2025-06-05 18:01:23] -rw------- 1 boincer umatlas 192997886 Jun  5 18:00 HITS.44871837._098542.pool.root.1
[2025-06-05 18:01:23] -rw-r--r-- 1 boincer umatlas       530 Jun  5 18:00 boinc_task_state.xml
[2025-06-05 18:01:23] -rw------- 1 boincer umatlas      1042 Jun  5 18:00 memory_monitor_summary.json
[2025-06-05 18:01:23] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 18:01 boinc_mmap_file
[2025-06-05 18:01:23] -rw-r--r-- 1 boincer umatlas        28 Jun  5 18:01 wrapper_checkpoint.txt
[2025-06-05 18:01:23] -rw------- 1 boincer umatlas    357034 Jun  5 18:01 log.44871837._098542.job.log.tgz.1
[2025-06-05 18:01:23] -rw------- 1 boincer umatlas        95 Jun  5 18:01 pilot_heartbeat.json
[2025-06-05 18:01:23] -rw------- 1 boincer umatlas      7723 Jun  5 18:01 heartbeat.json
[2025-06-05 18:01:23] -rw------- 1 boincer umatlas      4476 Jun  5 18:01 pilotlog.txt
[2025-06-05 18:01:23] -rw------- 1 boincer umatlas    922692 Jun  5 18:01 log.44871837._098542.job.log.1
[2025-06-05 18:01:23] -rw------- 1 boincer umatlas       357 Jun  5 18:01 output.list
[2025-06-05 18:01:23] -rw-r--r-- 1 boincer umatlas       620 Jun  5 18:01 runtime_log
[2025-06-05 18:01:23] -rw------- 1 boincer umatlas   1300480 Jun  5 18:01 result.tar.gz
[2025-06-05 18:01:23] -rw-r--r-- 1 boincer umatlas      8660 Jun  5 18:01 runtime_log.err
[2025-06-05 18:01:23] -rw------- 1 boincer umatlas       655 Jun  5 18:01 dBgMDmPMpe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlIeKDm2iZ6Wm.diag
[2025-06-05 18:01:23] -rw-r--r-- 1 boincer umatlas     20963 Jun  5 18:01 stderr.txt
[2025-06-05 18:01:23] HITS file was successfully produced:
[2025-06-05 18:01:23] -rw------- 1 boincer umatlas 192997886 Jun  5 18:00 shared/HITS.pool.root.1
[2025-06-05 18:01:23]  *** Contents of shared directory: ***
[2025-06-05 18:01:23] total 409864
[2025-06-05 18:01:23] -rw-r--r-- 2 boincer umatlas 224860721 Jun  5 15:08 ATLAS.root_0
[2025-06-05 18:01:23] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 15:08 start_atlas.sh
[2025-06-05 18:01:23] -rw-r--r-- 2 boincer umatlas    508884 Jun  5 15:08 input.tar.gz
[2025-06-05 18:01:23] -rw------- 1 boincer umatlas 192997886 Jun  5 18:00 HITS.pool.root.1
[2025-06-05 18:01:23] -rw------- 1 boincer umatlas   1300480 Jun  5 18:01 result.tar.gz
18:01:24 (3956391): run_atlas exited; CPU time 56106.149875
18:01:24 (3956391): called boinc_finish(0)

</stderr_txt>
]]>

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