Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:47:15 (3819131): wrapper (7.7.26015): starting
14:47:15 (3819131): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 14:47:15] Arguments: --nthreads 8
[2025-06-05 14:47:15] Threads: 8
[2025-06-05 14:47:15] Checking for CVMFS
[2025-06-05 14:47:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 14:47:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 14:47:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 14:47:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 14:47:16] 2.12.6.0 9081 33319 595652 146829 3 625 26915001 32935936 29282 16776704 0 189767464 99.653 168219526 25956 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 14:47:16] CVMFS is ok
[2025-06-05 14:47:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 14:47:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 14:47:16] Further information can be found at the LHC@home message board.
[2025-06-05 14:47:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 14:47:16] Checking for apptainer binary...
[2025-06-05 14:47:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 14:47:16] Running /usr/bin/apptainer --version
[2025-06-05 14:47:16] apptainer version 1.4.1-1.el9
[2025-06-05 14:47:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 14:47:16] c6-12-29-3.aglt2.org
[2025-06-05 14:47:16] apptainer works
[2025-06-05 14:47:16] Set ATHENA_PROC_NUMBER=8
[2025-06-05 14:47:16] Set ATHENA_CORE_NUMBER=8
[2025-06-05 14:47:16] Starting ATLAS job with PandaID=6667032799
[2025-06-05 14:47:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 17:02:20]  *** The last 200 lines of the pilot log: ***
[2025-06-05 17:02:20] 2025-06-05 21:01:47,026 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 17:02:20] 2025-06-05 21:01:47,026 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 17:02:20] 2025-06-05 21:01:47,026 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 17:02:20] 2025-06-05 21:01:47,029 | INFO     | fitting pss+swap vs Time
[2025-06-05 17:02:20] 2025-06-05 21:01:47,030 | INFO     | sum of square deviations: 713140813.0
[2025-06-05 17:02:20] 2025-06-05 21:01:47,030 | INFO     | sum of deviations: -3446226201.499997
[2025-06-05 17:02:20] 2025-06-05 21:01:47,030 | INFO     | mean x: 1749153276.5
[2025-06-05 17:02:20] 2025-06-05 21:01:47,031 | INFO     | mean y: 2192362.356060606
[2025-06-05 17:02:20] 2025-06-05 21:01:47,031 | INFO     | -- intersect: 8454909893.071652
[2025-06-05 17:02:20] 2025-06-05 21:01:47,031 | INFO     | intersect: 8454909893.071652
[2025-06-05 17:02:20] 2025-06-05 21:01:47,031 | INFO     | chi2: 2.426862987494954
[2025-06-05 17:02:20] 2025-06-05 21:01:47,031 | INFO     | sum of square deviations: 635130048.0
[2025-06-05 17:02:20] 2025-06-05 21:01:47,032 | INFO     | sum of deviations: 3772803395.9999995
[2025-06-05 17:02:20] 2025-06-05 21:01:47,032 | INFO     | mean x: 1749153124.0
[2025-06-05 17:02:20] 2025-06-05 21:01:47,032 | INFO     | mean y: 2206034.448818898
[2025-06-05 17:02:20] 2025-06-05 21:01:47,032 | INFO     | -- intersect: -10388124051.699472
[2025-06-05 17:02:20] 2025-06-05 21:01:47,032 | INFO     | intersect: -10388124051.699472
[2025-06-05 17:02:20] 2025-06-05 21:01:47,032 | INFO     | chi2: 1.7558035270287946
[2025-06-05 17:02:20] 2025-06-05 21:01:47,032 | INFO     | current chi2=1.7558035270287946 (change=27.65131216405577 %)
[2025-06-05 17:02:20] 2025-06-05 21:01:47,032 | INFO     | sum of square deviations: 563026370.5
[2025-06-05 17:02:20] 2025-06-05 21:01:47,033 | INFO     | sum of deviations: 3407435783.000002
[2025-06-05 17:02:20] 2025-06-05 21:01:47,033 | INFO     | mean x: 1749152971.5
[2025-06-05 17:02:20] 2025-06-05 21:01:47,033 | INFO     | mean y: 2205268.426229508
[2025-06-05 17:02:20] 2025-06-05 21:01:47,033 | INFO     | -- intersect: -10583669101.431341
[2025-06-05 17:02:20] 2025-06-05 21:01:47,033 | INFO     | intersect: -10583669101.431341
[2025-06-05 17:02:20] 2025-06-05 21:01:47,034 | INFO     | chi2: 1.7557728421227548
[2025-06-05 17:02:20] 2025-06-05 21:01:47,034 | INFO     | current chi2=1.7557728421227548 (change=0.0017476275430305635 %)
[2025-06-05 17:02:20] 2025-06-05 21:01:47,034 | INFO     | right removable region: 121
[2025-06-05 17:02:20] 2025-06-05 21:01:47,034 | INFO     | sum of square deviations: 635130048.0
[2025-06-05 17:02:20] 2025-06-05 21:01:47,035 | INFO     | sum of deviations: -21784738155.0
[2025-06-05 17:02:20] 2025-06-05 21:01:47,035 | INFO     | mean x: 1749153429.0
[2025-06-05 17:02:20] 2025-06-05 21:01:47,035 | INFO     | mean y: 2227684.433070866
[2025-06-05 17:02:20] 2025-06-05 21:01:47,035 | INFO     | -- intersect: 59997577555.96896
[2025-06-05 17:02:20] 2025-06-05 21:01:47,035 | INFO     | intersect: 59997577555.96896
[2025-06-05 17:02:20] 2025-06-05 21:01:47,035 | INFO     | chi2: 0.9496467956310809
[2025-06-05 17:02:20] 2025-06-05 21:01:47,035 | INFO     | current chi2=0.9496467956310809 (change=60.86936920112984 %)
[2025-06-05 17:02:20] 2025-06-05 21:01:47,036 | INFO     | sum of square deviations: 563026370.5
[2025-06-05 17:02:20] 2025-06-05 21:01:47,036 | INFO     | sum of deviations: -20434722267.0
[2025-06-05 17:02:20] 2025-06-05 21:01:47,036 | INFO     | mean x: 1749153581.5
[2025-06-05 17:02:20] 2025-06-05 21:01:47,036 | INFO     | mean y: 2224686.475409836
[2025-06-05 17:02:20] 2025-06-05 21:01:47,036 | INFO     | -- intersect: 63486760248.350746
[2025-06-05 17:02:20] 2025-06-05 21:01:47,036 | INFO     | intersect: 63486760248.350746
[2025-06-05 17:02:20] 2025-06-05 21:01:47,037 | INFO     | chi2: 0.9187257145819943
[2025-06-05 17:02:20] 2025-06-05 21:01:47,037 | INFO     | current chi2=0.9187257145819943 (change=3.2560612210077813 %)
[2025-06-05 17:02:20] 2025-06-05 21:01:47,037 | INFO     | left removable region: 20
[2025-06-05 17:02:20] 2025-06-05 21:01:47,037 | INFO     | sum of square deviations: 319447850.0
[2025-06-05 17:02:20] 2025-06-05 21:01:47,037 | INFO     | sum of deviations: -3606570893.0000005
[2025-06-05 17:02:20] 2025-06-05 21:01:47,038 | INFO     | mean x: 1749153551.0
[2025-06-05 17:02:20] 2025-06-05 21:01:47,038 | INFO     | mean y: 2214515.9306930695
[2025-06-05 17:02:20] 2025-06-05 21:01:47,038 | INFO     | -- intersect: 19750183658.38757
[2025-06-05 17:02:20] 2025-06-05 21:01:47,038 | INFO     | intersect: 19750183658.38757
[2025-06-05 17:02:20] 2025-06-05 21:01:47,038 | INFO     | chi2: 0.11248967196348332
[2025-06-05 17:02:20] 2025-06-05 21:01:47,038 | INFO     | -- intersect: 19750183658.38757
[2025-06-05 17:02:20] 2025-06-05 21:01:47,038 | INFO     | current memory leak: -11.29 B/s (using 101 data points, chi2=0.11)
[2025-06-05 17:02:20] 2025-06-05 21:01:47,039 | INFO     | could have reported an average CPU frequency of 2711 MHz (8 samples)
[2025-06-05 17:02:20] 2025-06-05 21:01:47,039 | INFO     | ..............................
[2025-06-05 17:02:20] 2025-06-05 21:01:47,039 | INFO     | . Timing measurements:
[2025-06-05 17:02:20] 2025-06-05 21:01:47,039 | INFO     | . get job = 0 s
[2025-06-05 17:02:20] 2025-06-05 21:01:47,039 | INFO     | . initial setup = 3 s
[2025-06-05 17:02:20] 2025-06-05 21:01:47,039 | INFO     | . payload setup = 8 s
[2025-06-05 17:02:20] 2025-06-05 21:01:47,039 | INFO     | . stage-in = 0 s
[2025-06-05 17:02:20] 2025-06-05 21:01:47,039 | INFO     | . payload execution = 8021 s
[2025-06-05 17:02:20] 2025-06-05 21:01:47,039 | INFO     | . stage-out = 0 s
[2025-06-05 17:02:20] 2025-06-05 21:01:47,039 | INFO     | . log creation = 0 s
[2025-06-05 17:02:20] 2025-06-05 21:01:47,039 | INFO     | ..............................
[2025-06-05 17:02:20] 2025-06-05 21:01:47,589 | INFO     | 
[2025-06-05 17:02:20] 2025-06-05 21:01:47,589 | INFO     | job summary report
[2025-06-05 17:02:20] 2025-06-05 21:01:47,589 | INFO     | --------------------------------------------------
[2025-06-05 17:02:20] 2025-06-05 21:01:47,589 | INFO     | PanDA job id: 6667032799
[2025-06-05 17:02:20] 2025-06-05 21:01:47,590 | INFO     | task id: 44871837
[2025-06-05 17:02:20] 2025-06-05 21:01:47,590 | INFO     | errors: (none)
[2025-06-05 17:02:20] 2025-06-05 21:01:47,590 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 17:02:20] 2025-06-05 21:01:47,590 | INFO     | pilot state: finished 
[2025-06-05 17:02:20] 2025-06-05 21:01:47,590 | INFO     | transexitcode: 0
[2025-06-05 17:02:20] 2025-06-05 21:01:47,590 | INFO     | exeerrorcode: 0
[2025-06-05 17:02:20] 2025-06-05 21:01:47,590 | INFO     | exeerrordiag: 
[2025-06-05 17:02:20] 2025-06-05 21:01:47,590 | INFO     | exitcode: 0
[2025-06-05 17:02:20] 2025-06-05 21:01:47,590 | INFO     | exitmsg: OK
[2025-06-05 17:02:20] 2025-06-05 21:01:47,590 | INFO     | cpuconsumptiontime: 55466 s
[2025-06-05 17:02:20] 2025-06-05 21:01:47,590 | INFO     | nevents: 400
[2025-06-05 17:02:20] 2025-06-05 21:01:47,590 | INFO     | neventsw: 0
[2025-06-05 17:02:20] 2025-06-05 21:01:47,590 | INFO     | pid: 3838397
[2025-06-05 17:02:20] 2025-06-05 21:01:47,590 | INFO     | pgrp: 3838397
[2025-06-05 17:02:20] 2025-06-05 21:01:47,591 | INFO     | corecount: 8
[2025-06-05 17:02:20] 2025-06-05 21:01:47,591 | INFO     | event service: False
[2025-06-05 17:02:20] 2025-06-05 21:01:47,591 | INFO     | sizes: {0: 2397562, 1: 2397761, 6: 2398023, 12: 2398051, 8033: 2425736, 8035: 2434677, 8036: 2434861, 8041: 2435055}
[2025-06-05 17:02:20] 2025-06-05 21:01:47,591 | INFO     | --------------------------------------------------
[2025-06-05 17:02:20] 2025-06-05 21:01:47,591 | INFO     | 
[2025-06-05 17:02:20] 2025-06-05 21:01:47,591 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 17:02:20] 2025-06-05 21:01:47,612 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 17:02:20] 2025-06-05 21:01:47,612 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 17:02:20] 2025-06-05 21:01:47,612 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 17:02:20] 2025-06-05 21:01:47,612 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 17:02:20] 2025-06-05 21:01:47,612 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 17:02:20] 2025-06-05 21:01:47,612 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 17:02:20] 2025-06-05 21:01:47,612 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 17:02:20] 2025-06-05 21:01:47,612 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 17:02:20] 2025-06-05 21:01:47,612 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 17:02:20] 2025-06-05 21:01:47,612 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 17:02:20] 2025-06-05 21:01:47,612 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 17:02:20] 2025-06-05 21:01:47,613 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 17:02:20] 2025-06-05 21:01:47,613 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 17:02:20] 2025-06-05 21:01:47,613 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 17:02:20] 2025-06-05 21:01:47,613 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 17:02:20] 2025-06-05 21:01:47,613 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 17:02:20] 2025-06-05 21:01:47,613 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 17:02:20] 2025-06-05 21:01:47,613 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 17:02:20] 2025-06-05 21:01:47,613 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 17:02:20] 2025-06-05 21:01:47,613 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 17:02:20] 2025-06-05 21:01:47,613 | INFO     | job 6667032799 has completed (purged errors)
[2025-06-05 17:02:20] 2025-06-05 21:01:47,613 | INFO     | overall cleanup function is called
[2025-06-05 17:02:20] 2025-06-05 21:01:48,622 | INFO     | --- collectZombieJob: --- 10, [3838397]
[2025-06-05 17:02:20] 2025-06-05 21:01:48,622 | INFO     | zombie collector waiting for pid 3838397
[2025-06-05 17:02:20] 2025-06-05 21:01:48,622 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 17:02:20] 2025-06-05 21:01:48,622 | INFO     | collected zombie processes
[2025-06-05 17:02:20] 2025-06-05 21:01:48,623 | INFO     | will attempt to kill all subprocesses of pid=3838397
[2025-06-05 17:02:20] 2025-06-05 21:01:48,955 | INFO     | process IDs to be killed: [3838397] (in reverse order)
[2025-06-05 17:02:20] 2025-06-05 21:01:49,076 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 17:02:20] 2025-06-05 21:01:49,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 17:02:20] 2025-06-05 21:01:49,094 | INFO     | did not find any defunct processes belonging to 3838397
[2025-06-05 17:02:20] 2025-06-05 21:01:49,110 | INFO     | did not find any defunct processes belonging to 3838397
[2025-06-05 17:02:20] 2025-06-05 21:01:49,111 | INFO     | ready for new job
[2025-06-05 17:02:20] 2025-06-05 21:01:49,111 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 17:02:20] 2025-06-05 21:01:49,112 | INFO     | ***************************************
[2025-06-05 17:02:20] 2025-06-05 21:01:49,112 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-05 17:02:20] 2025-06-05 21:01:49,113 | INFO     | ***************************************
[2025-06-05 17:02:20] 2025-06-05 21:01:49,113 | INFO     | 
[2025-06-05 17:02:20] 2025-06-05 21:01:49,129 | INFO     | architecture information:
[2025-06-05 17:02:20] 2025-06-05 21:01:49,129 | INFO     | executing command: cat /etc/os-release
[2025-06-05 17:02:20] 2025-06-05 21:01:49,146 | INFO     | cat /etc/os-release:
[2025-06-05 17:02:20] NAME="CentOS Linux"
[2025-06-05 17:02:20] VERSION="7 (Core)"
[2025-06-05 17:02:20] ID="centos"
[2025-06-05 17:02:20] ID_LIKE="rhel fedora"
[2025-06-05 17:02:20] VERSION_ID="7"
[2025-06-05 17:02:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 17:02:20] ANSI_COLOR="0;31"
[2025-06-05 17:02:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 17:02:20] HOME_URL="https://www.centos.org/"
[2025-06-05 17:02:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 17:02:20] 
[2025-06-05 17:02:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 17:02:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 17:02:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 17:02:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 17:02:20] 
[2025-06-05 17:02:20] 2025-06-05 21:01:49,147 | INFO     | ***************************************
[2025-06-05 17:02:20] 2025-06-05 21:01:49,649 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 17:02:20] 2025-06-05 21:01:49,669 | INFO     | sufficient remaining disk space (96596918272 B)
[2025-06-05 17:02:20] 2025-06-05 21:01:49,670 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 17:02:20] 2025-06-05 21:01:49,671 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 17:02:20] 2025-06-05 21:01:49,671 | INFO     | update_server=False
[2025-06-05 17:02:20] 2025-06-05 21:01:49,671 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 17:02:20] 2025-06-05 21:01:49,671 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 17:02:20] 2025-06-05 21:01:49,672 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:02:20] 2025-06-05 21:01:49,672 | INFO     | aborting loop
[2025-06-05 17:02:20] 2025-06-05 21:01:50,039 | INFO     | all data control threads have been joined
[2025-06-05 17:02:20] 2025-06-05 21:01:50,461 | INFO     | all job control threads have been joined
[2025-06-05 17:02:20] 2025-06-05 21:01:50,677 | INFO     | [job] retrieve thread has finished
[2025-06-05 17:02:20] 2025-06-05 21:01:50,677 | INFO     | [job] job monitor thread has finished
[2025-06-05 17:02:20] 2025-06-05 21:01:51,044 | INFO     | [data] control thread has finished
[2025-06-05 17:02:20] 2025-06-05 21:01:51,063 | INFO     | all payload control threads have been joined
[2025-06-05 17:02:20] 2025-06-05 21:01:51,286 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 17:02:20] 2025-06-05 21:01:51,346 | INFO     | [payload] failed_post thread has finished
[2025-06-05 17:02:20] 2025-06-05 21:01:51,451 | INFO     | [data] copytool_in thread has finished
[2025-06-05 17:02:20] 2025-06-05 21:01:51,466 | INFO     | [job] control thread has finished
[2025-06-05 17:02:20] 2025-06-05 21:01:51,607 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 17:02:20] 2025-06-05 21:01:51,677 | INFO     | [data] copytool_out thread has finished
[2025-06-05 17:02:20] 2025-06-05 21:01:51,732 | INFO     | [job] validate thread has finished
[2025-06-05 17:02:20] 2025-06-05 21:01:51,995 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 17:02:20] 2025-06-05 21:01:52,068 | INFO     | [payload] control thread has finished
[2025-06-05 17:02:20] 2025-06-05 21:01:52,077 | INFO     | [payload] validate_post thread has finished
[2025-06-05 17:02:20] 2025-06-05 21:01:52,109 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 17:02:20] 2025-06-05 21:01:52,116 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:02:20] 2025-06-05 21:01:52,981 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 17:02:20] 2025-06-05 21:01:53,121 | INFO     | [job] queue monitor thread has finished
[2025-06-05 17:02:20] 2025-06-05 21:01:56,986 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 17:02:20] 2025-06-05 21:01:57,442 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140225859749696)>', '<ExcThread(monitor, started 140225212823296)>']
[2025-06-05 17:02:20] 2025-06-05 21:02:02,467 | INFO     | all workflow threads have been joined
[2025-06-05 17:02:20] 2025-06-05 21:02:02,467 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 17:02:20] 2025-06-05 21:02:02,468 | INFO     | traces error code: 0
[2025-06-05 17:02:20] 2025-06-05 21:02:02,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 17:02:20] 2025-06-05 21:02:20,443 | INFO     | PID=3823607 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 17:02:20] 2025-06-05 21:02:20,443 | INFO     | .. there are 28 such processes running
[2025-06-05 17:02:20] 2025-06-05 21:02:20,444 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 17:02:20] 2025-06-05 21:02:20,444 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 17:02:20] 2025-06-05 21:02:20,444 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 17:02:20] 2025-06-05 21:02:20,444 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 17:02:20] 2025-06-05 21:02:20,444 | CRITICAL | thread 'MainThread' is not alive
[2025-06-05 17:02:20] 2025-06-05 21:02:20,444 | INFO     | [monitor] control thread has ended
[2025-06-05 17:02:20] 2025-06-05 21:02:20,612 [wrapper] ==== pilot stdout END ====
[2025-06-05 17:02:20] 2025-06-05 21:02:20,615 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 17:02:20] 2025-06-05 21:02:20,617 [wrapper] pilotpid: 3823607
[2025-06-05 17:02:20] 2025-06-05 21:02:20,619 [wrapper] Pilot exit status: 0
[2025-06-05 17:02:20] 2025-06-05 21:02:20,628 [wrapper] pandaids: 6667032799
[2025-06-05 17:02:20] 2025-06-05 21:02:20,687 [wrapper] cleanup supervisor_pilot  399614 3823608
[2025-06-05 17:02:20] 2025-06-05 21:02:20,689 [wrapper] Test setup, not cleaning
[2025-06-05 17:02:20] 2025-06-05 21:02:20,691 [wrapper] apfmon messages muted
[2025-06-05 17:02:20] 2025-06-05 21:02:20,693 [wrapper] ==== wrapper stdout END ====
[2025-06-05 17:02:20] 2025-06-05 21:02:20,694 [wrapper] ==== wrapper stderr END ====
[2025-06-05 17:02:20]  *** Error codes and diagnostics ***
[2025-06-05 17:02:20]     "exeErrorCode": 0,
[2025-06-05 17:02:20]     "exeErrorDiag": "",
[2025-06-05 17:02:20]     "pilotErrorCode": 0,
[2025-06-05 17:02:20]     "pilotErrorDiag": "",
[2025-06-05 17:02:20]  *** Listing of results directory ***
[2025-06-05 17:02:20] total 422600
[2025-06-05 17:02:20] -rw-r--r--. 1 boincer umatlas    529402 Jun  5 14:30 pilot3.tar.gz
[2025-06-05 17:02:20] -rwx------. 1 boincer umatlas     37140 Jun  5 14:46 runpilot2-wrapper.sh
[2025-06-05 17:02:20] -rw-r--r--. 1 boincer umatlas      5112 Jun  5 14:46 queuedata.json
[2025-06-05 17:02:20] -rw-r--r--. 1 boincer umatlas       100 Jun  5 14:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 17:02:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 14:47 run_atlas
[2025-06-05 17:02:20] -rw-r--r--. 1 boincer umatlas       105 Jun  5 14:47 job.xml
[2025-06-05 17:02:20] -rw-r--r--. 2 boincer umatlas 222127685 Jun  5 14:47 EVNT.44871834._002662.pool.root.1
[2025-06-05 17:02:20] -rw-r--r--. 2 boincer umatlas     15095 Jun  5 14:47 start_atlas.sh
[2025-06-05 17:02:20] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 14:47 shared
[2025-06-05 17:02:20] -rw-r--r--. 2 boincer umatlas    541905 Jun  5 14:47 input.tar.gz
[2025-06-05 17:02:20] -rw-r--r--. 1 boincer umatlas         0 Jun  5 14:47 boinc_lockfile
[2025-06-05 17:02:20] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 14:47 pandaJob.out
[2025-06-05 17:02:20] -rw-------. 1 boincer umatlas    987543 Jun  5 14:47 agis_schedconf.cvmfs.json
[2025-06-05 17:02:20] -rw-------. 1 boincer umatlas   1598969 Jun  5 14:47 agis_ddmendpoints.agis.ALL.json
[2025-06-05 17:02:20] drwx------. 4 boincer umatlas      4096 Jun  5 14:47 pilot3
[2025-06-05 17:02:20] -rw-r--r--. 1 boincer umatlas      6859 Jun  5 17:00 init_data.xml
[2025-06-05 17:02:20] -rw-r--r--. 1 boincer umatlas       529 Jun  5 17:01 boinc_task_state.xml
[2025-06-05 17:02:20] -rw-------. 1 boincer umatlas 204540743 Jun  5 17:01 HITS.44871837._067659.pool.root.1
[2025-06-05 17:02:20] -rw-------. 1 boincer umatlas      1044 Jun  5 17:01 memory_monitor_summary.json
[2025-06-05 17:02:20] -rw-------. 1 boincer umatlas    339251 Jun  5 17:01 log.44871837._067659.job.log.tgz.1
[2025-06-05 17:02:20] -rw-------. 1 boincer umatlas        95 Jun  5 17:01 pilot_heartbeat.json
[2025-06-05 17:02:20] -rw-------. 1 boincer umatlas      7757 Jun  5 17:01 heartbeat.json
[2025-06-05 17:02:20] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 17:02 boinc_mmap_file
[2025-06-05 17:02:20] -rw-r--r--. 1 boincer umatlas        27 Jun  5 17:02 wrapper_checkpoint.txt
[2025-06-05 17:02:20] -rw-------. 1 boincer umatlas       893 Jun  5 17:02 pilotlog.txt
[2025-06-05 17:02:20] -rw-------. 1 boincer umatlas    751628 Jun  5 17:02 log.44871837._067659.job.log.1
[2025-06-05 17:02:20] -rw-------. 1 boincer umatlas       357 Jun  5 17:02 output.list
[2025-06-05 17:02:20] -rw-r--r--. 1 boincer umatlas       620 Jun  5 17:02 runtime_log
[2025-06-05 17:02:20] -rw-------. 1 boincer umatlas   1105920 Jun  5 17:02 result.tar.gz
[2025-06-05 17:02:20] -rw-r--r--. 1 boincer umatlas      8670 Jun  5 17:02 runtime_log.err
[2025-06-05 17:02:20] -rw-------. 1 boincer umatlas       655 Jun  5 17:02 41gKDm8mUh7n9Rq4apOajLDm4fhM0noT9bVof3QYDmE5aKDm6bniRm.diag
[2025-06-05 17:02:20] -rw-r--r--. 1 boincer umatlas     20900 Jun  5 17:02 stderr.txt
[2025-06-05 17:02:20] HITS file was successfully produced:
[2025-06-05 17:02:20] -rw-------. 1 boincer umatlas 204540743 Jun  5 17:01 shared/HITS.pool.root.1
[2025-06-05 17:02:20]  *** Contents of shared directory: ***
[2025-06-05 17:02:20] total 418308
[2025-06-05 17:02:20] -rw-r--r--. 2 boincer umatlas 222127685 Jun  5 14:47 ATLAS.root_0
[2025-06-05 17:02:20] -rw-r--r--. 2 boincer umatlas     15095 Jun  5 14:47 start_atlas.sh
[2025-06-05 17:02:20] -rw-r--r--. 2 boincer umatlas    541905 Jun  5 14:47 input.tar.gz
[2025-06-05 17:02:20] -rw-------. 1 boincer umatlas 204540743 Jun  5 17:01 HITS.pool.root.1
[2025-06-05 17:02:20] -rw-------. 1 boincer umatlas   1105920 Jun  5 17:02 result.tar.gz
17:02:22 (3819131): run_atlas exited; CPU time 55780.359922
17:02:22 (3819131): called boinc_finish(0)

</stderr_txt>
]]>

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