Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:44:42 (620815): wrapper (7.7.26015): starting
14:44:42 (620815): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 14:44:42] Arguments: --nthreads 12
[2025-06-05 14:44:42] Threads: 12
[2025-06-05 14:44:42] Checking for CVMFS
[2025-06-05 14:44:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 14:44:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 14:44:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 14:44:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 14:44:43] 2.12.6.0 3367424 25104 466676 146829 0 92 22728184 32935937 9946 16776704 0 90799409 99.620 90081197 32588 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 14:44:43] CVMFS is ok
[2025-06-05 14:44:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 14:44:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 14:44:43] Further information can be found at the LHC@home message board.
[2025-06-05 14:44:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 14:44:43] Checking for apptainer binary...
[2025-06-05 14:44:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 14:44:43] Running /usr/bin/apptainer --version
[2025-06-05 14:44:43] apptainer version 1.4.1-1.el9
[2025-06-05 14:44:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 14:44:43] c6-2-29-4.aglt2.org
[2025-06-05 14:44:43] apptainer works
[2025-06-05 14:44:43] Set ATHENA_PROC_NUMBER=12
[2025-06-05 14:44:43] Set ATHENA_CORE_NUMBER=12
[2025-06-05 14:44:43] Starting ATLAS job with PandaID=6667923338
[2025-06-05 14:44:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 16:14:07]  *** The last 200 lines of the pilot log: ***
[2025-06-05 16:14:07]  guid=9392a5f4-9aa8-4c0c-a545-ff7632c8bb8f
[2025-06-05 16:14:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 16:14:07]  is_altstaged=None
[2025-06-05 16:14:07]  is_tar=False
[2025-06-05 16:14:07]  lfn=log.44871837._077890.job.log.tgz.1
[2025-06-05 16:14:07]  mtime=0
[2025-06-05 16:14:07]  protocol_id=None
[2025-06-05 16:14:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 16:14:07]  replicas=None
[2025-06-05 16:14:07]  scope=mc23_13p6TeV
[2025-06-05 16:14:07]  status=None
[2025-06-05 16:14:07]  status_code=0
[2025-06-05 16:14:07]  storage_token=
[2025-06-05 16:14:07]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667923338/log.44871837._077890.job.log.tgz.1
[2025-06-05 16:14:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/be/log.44871837._077890.job.log.tgz.1
[2025-06-05 16:14:07]  workdir=None
[2025-06-05 16:14:07] ]
[2025-06-05 16:14:07] 2025-06-05 20:13:40,065 | INFO     | transferring file log.44871837._077890.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667923338/log.44871837._077890.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 16:14:07] 2025-06-05 20:13:40,065 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667923338/log.44871837._077890.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._077890.job
[2025-06-05 16:14:07] 2025-06-05 20:13:40,076 | INFO     | adding to output.list: log.44871837._077890.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/be/log.44871837._077890.job.log.tg
[2025-06-05 16:14:07] 2025-06-05 20:13:40,077 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 16:14:07] 2025-06-05 20:13:40,077 | INFO     | summary of transferred files:
[2025-06-05 16:14:07] 2025-06-05 20:13:40,077 | INFO     |  -- lfn=log.44871837._077890.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 16:14:07] 2025-06-05 20:13:40,077 | INFO     | stage-out finished correctly
[2025-06-05 16:14:07] 2025-06-05 20:13:41,940 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 16:14:07] 2025-06-05 20:13:43,549 | INFO     | job 6667923338 has state=finished
[2025-06-05 16:14:07] 2025-06-05 20:13:43,549 | INFO     | preparing for final server update for job 6667923338 in state='finished'
[2025-06-05 16:14:07] 2025-06-05 20:13:43,550 | INFO     | this job has now completed (state=finished)
[2025-06-05 16:14:07] 2025-06-05 20:13:43,550 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 16:14:07] 2025-06-05 20:13:43,550 | INFO     | log transfer has been attempted: DONE
[2025-06-05 16:14:07] 2025-06-05 20:13:43,550 | INFO     | job 6667923338 has finished - writing final server update
[2025-06-05 16:14:07] 2025-06-05 20:13:43,550 | INFO     | total number of processed events: 400 (read)
[2025-06-05 16:14:07] 2025-06-05 20:13:43,568 | INFO     | executing command: lscpu
[2025-06-05 16:14:07] 2025-06-05 20:13:43,630 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 16:14:07] 2025-06-05 20:13:43,976 | WARNING  | process 635439 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 16:14:07] 2025-06-05 20:13:43,976 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667923338/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 16:14:07] 2025-06-05 20:13:43,977 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667923338/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 16:14:07] 2025-06-05 20:13:44,175 | INFO     | number of running child processes to parent process 635439: 1
[2025-06-05 16:14:07] 2025-06-05 20:13:44,175 | INFO     | maximum number of monitored processes: 6
[2025-06-05 16:14:07] 2025-06-05 20:13:46,570 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 16:14:07] 2025-06-05 20:13:46,571 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667923338/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 16:14:07] 2025-06-05 20:13:46,571 | INFO     | extracted standard info from prmon json
[2025-06-05 16:14:07] 2025-06-05 20:13:46,571 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 16:14:07] 2025-06-05 20:13:46,571 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 16:14:07] 2025-06-05 20:13:46,572 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 16:14:07] 2025-06-05 20:13:46,572 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 16:14:07] 2025-06-05 20:13:46,574 | INFO     | fitting pss+swap vs Time
[2025-06-05 16:14:07] 2025-06-05 20:13:46,574 | INFO     | sum of square deviations: 158727378.19999978
[2025-06-05 16:14:07] 2025-06-05 20:13:46,575 | INFO     | sum of deviations: -13485761883.249983
[2025-06-05 16:14:07] 2025-06-05 20:13:46,575 | INFO     | mean x: 1749151835.65
[2025-06-05 16:14:07] 2025-06-05 20:13:46,575 | INFO     | mean y: 2481722.5625
[2025-06-05 16:14:07] 2025-06-05 20:13:46,575 | INFO     | -- intersect: 148613549458.4847
[2025-06-05 16:14:07] 2025-06-05 20:13:46,575 | INFO     | intersect: 148613549458.4847
[2025-06-05 16:14:07] 2025-06-05 20:13:46,575 | INFO     | chi2: 0.18943212310640561
[2025-06-05 16:14:07] 2025-06-05 20:13:46,575 | INFO     | -- intersect: 148613549458.4847
[2025-06-05 16:14:07] 2025-06-05 20:13:46,575 | INFO     | current memory leak: -84.96 B/s (using 80 data points, chi2=0.19)
[2025-06-05 16:14:07] 2025-06-05 20:13:46,576 | INFO     | ..............................
[2025-06-05 16:14:07] 2025-06-05 20:13:46,576 | INFO     | . Timing measurements:
[2025-06-05 16:14:07] 2025-06-05 20:13:46,576 | INFO     | . get job = 0 s
[2025-06-05 16:14:07] 2025-06-05 20:13:46,576 | INFO     | . initial setup = 3 s
[2025-06-05 16:14:07] 2025-06-05 20:13:46,576 | INFO     | . payload setup = 6 s
[2025-06-05 16:14:07] 2025-06-05 20:13:46,576 | INFO     | . stage-in = 0 s
[2025-06-05 16:14:07] 2025-06-05 20:13:46,576 | INFO     | . payload execution = 5299 s
[2025-06-05 16:14:07] 2025-06-05 20:13:46,576 | INFO     | . stage-out = 0 s
[2025-06-05 16:14:07] 2025-06-05 20:13:46,576 | INFO     | . log creation = 0 s
[2025-06-05 16:14:07] 2025-06-05 20:13:46,576 | INFO     | ..............................
[2025-06-05 16:14:07] 2025-06-05 20:13:46,667 | INFO     | 
[2025-06-05 16:14:07] 2025-06-05 20:13:46,667 | INFO     | job summary report
[2025-06-05 16:14:07] 2025-06-05 20:13:46,667 | INFO     | --------------------------------------------------
[2025-06-05 16:14:07] 2025-06-05 20:13:46,667 | INFO     | PanDA job id: 6667923338
[2025-06-05 16:14:07] 2025-06-05 20:13:46,667 | INFO     | task id: 44871837
[2025-06-05 16:14:07] 2025-06-05 20:13:46,667 | INFO     | errors: (none)
[2025-06-05 16:14:07] 2025-06-05 20:13:46,667 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 16:14:07] 2025-06-05 20:13:46,668 | INFO     | pilot state: finished 
[2025-06-05 16:14:07] 2025-06-05 20:13:46,668 | INFO     | transexitcode: 0
[2025-06-05 16:14:07] 2025-06-05 20:13:46,668 | INFO     | exeerrorcode: 0
[2025-06-05 16:14:07] 2025-06-05 20:13:46,668 | INFO     | exeerrordiag: 
[2025-06-05 16:14:07] 2025-06-05 20:13:46,668 | INFO     | exitcode: 0
[2025-06-05 16:14:07] 2025-06-05 20:13:46,668 | INFO     | exitmsg: OK
[2025-06-05 16:14:07] 2025-06-05 20:13:46,668 | INFO     | cpuconsumptiontime: 47674 s
[2025-06-05 16:14:07] 2025-06-05 20:13:46,668 | INFO     | nevents: 400
[2025-06-05 16:14:07] 2025-06-05 20:13:46,668 | INFO     | neventsw: 0
[2025-06-05 16:14:07] 2025-06-05 20:13:46,668 | INFO     | pid: 635439
[2025-06-05 16:14:07] 2025-06-05 20:13:46,668 | INFO     | pgrp: 635439
[2025-06-05 16:14:07] 2025-06-05 20:13:46,668 | INFO     | corecount: 12
[2025-06-05 16:14:07] 2025-06-05 20:13:46,668 | INFO     | event service: False
[2025-06-05 16:14:07] 2025-06-05 20:13:46,668 | INFO     | sizes: {0: 2397159, 1: 2397414, 5: 2397620, 12: 2397676, 5310: 2423876, 5311: 2432817, 5313: 2433001, 5318: 2433171}
[2025-06-05 16:14:07] 2025-06-05 20:13:46,668 | INFO     | --------------------------------------------------
[2025-06-05 16:14:07] 2025-06-05 20:13:46,668 | INFO     | 
[2025-06-05 16:14:07] 2025-06-05 20:13:46,669 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 16:14:07] 2025-06-05 20:13:46,685 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 16:14:07] 2025-06-05 20:13:46,686 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 16:14:07] 2025-06-05 20:13:46,686 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 16:14:07] 2025-06-05 20:13:46,686 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 16:14:07] 2025-06-05 20:13:46,686 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 16:14:07] 2025-06-05 20:13:46,686 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 16:14:07] 2025-06-05 20:13:46,686 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 16:14:07] 2025-06-05 20:13:46,686 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 16:14:07] 2025-06-05 20:13:46,686 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 16:14:07] 2025-06-05 20:13:46,686 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 16:14:07] 2025-06-05 20:13:46,686 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 16:14:07] 2025-06-05 20:13:46,686 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 16:14:07] 2025-06-05 20:13:46,686 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 16:14:07] 2025-06-05 20:13:46,686 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 16:14:07] 2025-06-05 20:13:46,687 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 16:14:07] 2025-06-05 20:13:46,687 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 16:14:07] 2025-06-05 20:13:46,687 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 16:14:07] 2025-06-05 20:13:46,687 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 16:14:07] 2025-06-05 20:13:46,687 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 16:14:07] 2025-06-05 20:13:46,687 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 16:14:07] 2025-06-05 20:13:46,687 | INFO     | job 6667923338 has completed (purged errors)
[2025-06-05 16:14:07] 2025-06-05 20:13:46,687 | INFO     | overall cleanup function is called
[2025-06-05 16:14:07] 2025-06-05 20:13:47,695 | INFO     | --- collectZombieJob: --- 10, [635439]
[2025-06-05 16:14:07] 2025-06-05 20:13:47,695 | INFO     | zombie collector waiting for pid 635439
[2025-06-05 16:14:07] 2025-06-05 20:13:47,695 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 16:14:07] 2025-06-05 20:13:47,695 | INFO     | collected zombie processes
[2025-06-05 16:14:07] 2025-06-05 20:13:47,695 | INFO     | will attempt to kill all subprocesses of pid=635439
[2025-06-05 16:14:07] 2025-06-05 20:13:47,861 | INFO     | process IDs to be killed: [635439] (in reverse order)
[2025-06-05 16:14:07] 2025-06-05 20:13:47,925 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 16:14:07] 2025-06-05 20:13:47,925 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 16:14:07] 2025-06-05 20:13:47,932 | INFO     | did not find any defunct processes belonging to 635439
[2025-06-05 16:14:07] 2025-06-05 20:13:47,938 | INFO     | did not find any defunct processes belonging to 635439
[2025-06-05 16:14:07] 2025-06-05 20:13:47,938 | INFO     | ready for new job
[2025-06-05 16:14:07] 2025-06-05 20:13:47,938 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 16:14:07] 2025-06-05 20:13:47,939 | INFO     | **************************************
[2025-06-05 16:14:07] 2025-06-05 20:13:47,939 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 16:14:07] 2025-06-05 20:13:47,939 | INFO     | **************************************
[2025-06-05 16:14:07] 2025-06-05 20:13:47,939 | INFO     | 
[2025-06-05 16:14:07] 2025-06-05 20:13:47,954 | INFO     | architecture information:
[2025-06-05 16:14:07] 2025-06-05 20:13:47,954 | INFO     | executing command: cat /etc/os-release
[2025-06-05 16:14:07] 2025-06-05 20:13:47,964 | INFO     | cat /etc/os-release:
[2025-06-05 16:14:07] NAME="CentOS Linux"
[2025-06-05 16:14:07] VERSION="7 (Core)"
[2025-06-05 16:14:07] ID="centos"
[2025-06-05 16:14:07] ID_LIKE="rhel fedora"
[2025-06-05 16:14:07] VERSION_ID="7"
[2025-06-05 16:14:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 16:14:07] ANSI_COLOR="0;31"
[2025-06-05 16:14:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 16:14:07] HOME_URL="https://www.centos.org/"
[2025-06-05 16:14:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 16:14:07] 
[2025-06-05 16:14:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 16:14:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 16:14:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 16:14:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 16:14:07] 
[2025-06-05 16:14:07] 2025-06-05 20:13:47,965 | INFO     | **************************************
[2025-06-05 16:14:07] 2025-06-05 20:13:48,468 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 16:14:07] 2025-06-05 20:13:48,484 | INFO     | sufficient remaining disk space (76542902272 B)
[2025-06-05 16:14:07] 2025-06-05 20:13:48,484 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 16:14:07] 2025-06-05 20:13:48,485 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 16:14:07] 2025-06-05 20:13:48,485 | INFO     | update_server=False
[2025-06-05 16:14:07] 2025-06-05 20:13:48,485 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 16:14:07] 2025-06-05 20:13:48,485 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:14:07] 2025-06-05 20:13:48,485 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:14:07] 2025-06-05 20:13:48,485 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 16:14:07] 2025-06-05 20:13:48,486 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 16:14:07] 2025-06-05 20:13:48,486 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 16:14:07] 2025-06-05 20:13:48,486 | INFO     | aborting loop
[2025-06-05 16:14:07] 2025-06-05 20:13:48,487 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 16:14:07] 2025-06-05 20:13:48,487 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 16:14:07] 2025-06-05 20:13:48,487 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 16:14:07] 2025-06-05 20:13:48,560 | INFO     | all data control threads have been joined
[2025-06-05 16:14:07] 2025-06-05 20:13:49,463 | INFO     | all job control threads have been joined
[2025-06-05 16:14:07] 2025-06-05 20:13:49,490 | INFO     | [job] retrieve thread has finished
[2025-06-05 16:14:07] 2025-06-05 20:13:49,491 | INFO     | [job] queue monitor thread has finished
[2025-06-05 16:14:07] 2025-06-05 20:13:49,492 | INFO     | [job] job monitor thread has finished
[2025-06-05 16:14:07] 2025-06-05 20:13:49,565 | INFO     | [data] control thread has finished
[2025-06-05 16:14:07] 2025-06-05 20:13:49,839 | INFO     | [payload] failed_post thread has finished
[2025-06-05 16:14:07] 2025-06-05 20:13:49,893 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 16:14:07] 2025-06-05 20:13:49,978 | INFO     | all payload control threads have been joined
[2025-06-05 16:14:07] 2025-06-05 20:13:49,997 | INFO     | [payload] validate_post thread has finished
[2025-06-05 16:14:07] 2025-06-05 20:13:50,468 | INFO     | [job] control thread has finished
[2025-06-05 16:14:07] 2025-06-05 20:13:50,491 | INFO     | [data] copytool_out thread has finished
[2025-06-05 16:14:07] 2025-06-05 20:13:50,599 | INFO     | [job] validate thread has finished
[2025-06-05 16:14:07] 2025-06-05 20:13:50,832 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 16:14:07] 2025-06-05 20:13:50,898 | INFO     | [data] copytool_in thread has finished
[2025-06-05 16:14:07] 2025-06-05 20:13:50,903 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 16:14:07] 2025-06-05 20:13:50,983 | INFO     | [payload] control thread has finished
[2025-06-05 16:14:07] 2025-06-05 20:13:52,492 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 16:14:07] 2025-06-05 20:13:59,433 | INFO     | job.realtimelogging is not enabled
[2025-06-05 16:14:07] 2025-06-05 20:14:00,438 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 16:14:07] 2025-06-05 20:14:02,218 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140700516788032)>', '<ExcThread(monitor, started 140699898996480)>']
[2025-06-05 16:14:07] 2025-06-05 20:14:02,557 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 16:14:07] 2025-06-05 20:14:02,557 | INFO     | [monitor] control thread has ended
[2025-06-05 16:14:07] 2025-06-05 20:14:07,243 | INFO     | all workflow threads have been joined
[2025-06-05 16:14:07] 2025-06-05 20:14:07,243 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 16:14:07] 2025-06-05 20:14:07,243 | INFO     | traces error code: 0
[2025-06-05 16:14:07] 2025-06-05 20:14:07,243 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 16:14:07] 2025-06-05 20:14:07,370 [wrapper] ==== pilot stdout END ====
[2025-06-05 16:14:07] 2025-06-05 20:14:07,372 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 16:14:07] 2025-06-05 20:14:07,374 [wrapper] pilotpid: 624619
[2025-06-05 16:14:07] 2025-06-05 20:14:07,376 [wrapper] Pilot exit status: 0
[2025-06-05 16:14:07] 2025-06-05 20:14:07,384 [wrapper] pandaids: 6667923338
[2025-06-05 16:14:07] 2025-06-05 20:14:07,441 [wrapper] cleanup supervisor_pilot  758717 624620
[2025-06-05 16:14:07] 2025-06-05 20:14:07,444 [wrapper] Test setup, not cleaning
[2025-06-05 16:14:07] 2025-06-05 20:14:07,446 [wrapper] apfmon messages muted
[2025-06-05 16:14:07] 2025-06-05 20:14:07,449 [wrapper] ==== wrapper stdout END ====
[2025-06-05 16:14:07] 2025-06-05 20:14:07,451 [wrapper] ==== wrapper stderr END ====
[2025-06-05 16:14:07]  *** Error codes and diagnostics ***
[2025-06-05 16:14:07]     "exeErrorCode": 0,
[2025-06-05 16:14:07]     "exeErrorDiag": "",
[2025-06-05 16:14:07]     "pilotErrorCode": 0,
[2025-06-05 16:14:07]     "pilotErrorDiag": "",
[2025-06-05 16:14:07]  *** Listing of results directory ***
[2025-06-05 16:14:07] total 422072
[2025-06-05 16:14:07] -rw-r--r--. 1 boincer umatlas    495897 May 27 22:39 pilot3.tar.gz
[2025-06-05 16:14:07] -rw-r--r--. 1 boincer umatlas      5111 May 27 23:00 queuedata.json
[2025-06-05 16:14:07] -rwx------. 1 boincer umatlas     37140 May 27 23:02 runpilot2-wrapper.sh
[2025-06-05 16:14:07] -rw-r--r--. 1 boincer umatlas       100 Jun  5 14:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 16:14:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 14:44 run_atlas
[2025-06-05 16:14:07] -rw-r--r--. 1 boincer umatlas       105 Jun  5 14:44 job.xml
[2025-06-05 16:14:07] -rw-r--r--. 2 boincer umatlas 226035173 Jun  5 14:44 EVNT.44871834._003045.pool.root.1
[2025-06-05 16:14:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 14:44 start_atlas.sh
[2025-06-05 16:14:07] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 14:44 shared
[2025-06-05 16:14:07] -rw-r--r--. 2 boincer umatlas    508880 Jun  5 14:44 input.tar.gz
[2025-06-05 16:14:07] -rw-r--r--. 1 boincer umatlas         0 Jun  5 14:44 boinc_lockfile
[2025-06-05 16:14:07] -rw-r--r--. 1 boincer umatlas      2556 Jun  5 14:44 pandaJob.out
[2025-06-05 16:14:07] -rw-------. 1 boincer umatlas    987543 Jun  5 14:44 agis_schedconf.cvmfs.json
[2025-06-05 16:14:07] -rw-------. 1 boincer umatlas   1598969 Jun  5 14:44 agis_ddmendpoints.agis.ALL.json
[2025-06-05 16:14:07] drwx------. 4 boincer umatlas      4096 Jun  5 14:44 pilot3
[2025-06-05 16:14:07] -rw-r--r--. 1 boincer umatlas      6842 Jun  5 16:09 init_data.xml
[2025-06-05 16:14:07] -rw-------. 1 boincer umatlas 200609769 Jun  5 16:13 HITS.44871837._077890.pool.root.1
[2025-06-05 16:14:07] -rw-r--r--. 1 boincer umatlas       529 Jun  5 16:13 boinc_task_state.xml
[2025-06-05 16:14:07] -rw-------. 1 boincer umatlas        95 Jun  5 16:13 pilot_heartbeat.json
[2025-06-05 16:14:07] -rw-------. 1 boincer umatlas      1041 Jun  5 16:13 memory_monitor_summary.json
[2025-06-05 16:14:07] -rw-------. 1 boincer umatlas    357339 Jun  5 16:13 log.44871837._077890.job.log.tgz.1
[2025-06-05 16:14:07] -rw-------. 1 boincer umatlas      7718 Jun  5 16:13 heartbeat.json
[2025-06-05 16:14:07] -rw-r--r--. 1 boincer umatlas        27 Jun  5 16:13 wrapper_checkpoint.txt
[2025-06-05 16:14:07] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 16:13 boinc_mmap_file
[2025-06-05 16:14:07] -rw-------. 1 boincer umatlas      4548 Jun  5 16:14 pilotlog.txt
[2025-06-05 16:14:07] -rw-------. 1 boincer umatlas    502429 Jun  5 16:14 log.44871837._077890.job.log.1
[2025-06-05 16:14:07] -rw-------. 1 boincer umatlas       357 Jun  5 16:14 output.list
[2025-06-05 16:14:07] -rw-r--r--. 1 boincer umatlas       620 Jun  5 16:14 runtime_log
[2025-06-05 16:14:07] -rw-------. 1 boincer umatlas    880640 Jun  5 16:14 result.tar.gz
[2025-06-05 16:14:07] -rw-r--r--. 1 boincer umatlas      8666 Jun  5 16:14 runtime_log.err
[2025-06-05 16:14:07] -rw-------. 1 boincer umatlas       654 Jun  5 16:14 kWYKDmqEMe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmzpSKDmLpY6fm.diag
[2025-06-05 16:14:07] -rw-r--r--. 1 boincer umatlas     21348 Jun  5 16:14 stderr.txt
[2025-06-05 16:14:07] HITS file was successfully produced:
[2025-06-05 16:14:07] -rw-------. 1 boincer umatlas 200609769 Jun  5 16:13 shared/HITS.pool.root.1
[2025-06-05 16:14:07]  *** Contents of shared directory: ***
[2025-06-05 16:14:07] total 418032
[2025-06-05 16:14:07] -rw-r--r--. 2 boincer umatlas 226035173 Jun  5 14:44 ATLAS.root_0
[2025-06-05 16:14:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 14:44 start_atlas.sh
[2025-06-05 16:14:07] -rw-r--r--. 2 boincer umatlas    508880 Jun  5 14:44 input.tar.gz
[2025-06-05 16:14:07] -rw-------. 1 boincer umatlas 200609769 Jun  5 16:13 HITS.pool.root.1
[2025-06-05 16:14:07] -rw-------. 1 boincer umatlas    880640 Jun  5 16:14 result.tar.gz
16:14:08 (620815): run_atlas exited; CPU time 47744.896891
16:14:08 (620815): called boinc_finish(0)

</stderr_txt>
]]>

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