Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:40:24 (4099204): wrapper (7.7.26015): starting
14:40:24 (4099204): wrapper: running run_atlas (--nthreads 10)
[2025-06-05 14:40:24] Arguments: --nthreads 10
[2025-06-05 14:40:24] Threads: 10
[2025-06-05 14:40:24] Checking for CVMFS
[2025-06-05 14:40:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 14:40:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 14:40:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 14:40:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 14:40:25] 2.12.6.0 3861 1631 136280 146829 1 173 20379082 21042176 23304 16776704 0 9700240 99.814 6573930 31559 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 14:40:25] CVMFS is ok
[2025-06-05 14:40:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 14:40:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 14:40:25] Further information can be found at the LHC@home message board.
[2025-06-05 14:40:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 14:40:25] Checking for apptainer binary...
[2025-06-05 14:40:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 14:40:25] Running /usr/bin/apptainer --version
[2025-06-05 14:40:25] apptainer version 1.4.1-1.el9
[2025-06-05 14:40:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 14:40:25] c-16-12.aglt2.org
[2025-06-05 14:40:25] apptainer works
[2025-06-05 14:40:25] Set ATHENA_PROC_NUMBER=10
[2025-06-05 14:40:25] Set ATHENA_CORE_NUMBER=10
[2025-06-05 14:40:25] Starting ATLAS job with PandaID=6668442545
[2025-06-05 14:40:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 21:53:24]  *** The last 200 lines of the pilot log: ***
[2025-06-05 21:53:24] 2025-06-06 01:52:57,667 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:53:24] 2025-06-06 01:53:00,172 | INFO     | monitor loop #1607: job 0:6668442545 is in state 'finished'
[2025-06-05 21:53:24] 2025-06-06 01:53:00,176 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 21:53:24] 2025-06-06 01:53:02,136 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 21:53:24] 2025-06-06 01:53:02,137 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668442545/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 21:53:24] 2025-06-06 01:53:02,138 | INFO     | extracted standard info from prmon json
[2025-06-05 21:53:24] 2025-06-06 01:53:02,138 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 21:53:24] 2025-06-06 01:53:02,138 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 21:53:24] 2025-06-06 01:53:02,139 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 21:53:24] 2025-06-06 01:53:02,139 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 21:53:24] 2025-06-06 01:53:02,157 | INFO     | fitting pss+swap vs Time
[2025-06-05 21:53:24] 2025-06-06 01:53:02,158 | INFO     | sum of square deviations: 23803243522.621155
[2025-06-05 21:53:24] 2025-06-06 01:53:02,163 | INFO     | sum of deviations: -48102695987.54352
[2025-06-05 21:53:24] 2025-06-06 01:53:02,164 | INFO     | mean x: 1749161832.1317647
[2025-06-05 21:53:24] 2025-06-06 01:53:02,164 | INFO     | mean y: 2200683.8847058825
[2025-06-05 21:53:24] 2025-06-06 01:53:02,164 | INFO     | -- intersect: 3536987855.392989
[2025-06-05 21:53:24] 2025-06-06 01:53:02,164 | INFO     | intersect: 3536987855.392989
[2025-06-05 21:53:24] 2025-06-06 01:53:02,165 | INFO     | chi2: 3.19728516278657
[2025-06-05 21:53:24] 2025-06-06 01:53:02,166 | INFO     | sum of square deviations: 22972975267.533367
[2025-06-05 21:53:24] 2025-06-06 01:53:02,171 | INFO     | sum of deviations: -14088026621.400028
[2025-06-05 21:53:24] 2025-06-06 01:53:02,171 | INFO     | mean x: 1749161679.6333334
[2025-06-05 21:53:24] 2025-06-06 01:53:02,171 | INFO     | mean y: 2206888.9
[2025-06-05 21:53:24] 2025-06-06 01:53:02,171 | INFO     | -- intersect: 1074868832.8073227
[2025-06-05 21:53:24] 2025-06-06 01:53:02,171 | INFO     | intersect: 1074868832.8073227
[2025-06-05 21:53:24] 2025-06-06 01:53:02,172 | INFO     | chi2: 2.5015587580980596
[2025-06-05 21:53:24] 2025-06-06 01:53:02,172 | INFO     | current chi2=2.5015587580980596 (change=21.759910964030347 %)
[2025-06-05 21:53:24] 2025-06-06 01:53:02,173 | INFO     | right removable region: 419
[2025-06-05 21:53:24] 2025-06-06 01:53:02,173 | INFO     | sum of square deviations: 22972941107.533375
[2025-06-05 21:53:24] 2025-06-06 01:53:02,179 | INFO     | sum of deviations: -119169313809.36673
[2025-06-05 21:53:24] 2025-06-06 01:53:02,180 | INFO     | mean x: 1749161984.6333334
[2025-06-05 21:53:24] 2025-06-06 01:53:02,180 | INFO     | mean y: 2213690.1404761905
[2025-06-05 21:53:24] 2025-06-06 01:53:02,180 | INFO     | -- intersect: 9075776908.47084
[2025-06-05 21:53:24] 2025-06-06 01:53:02,180 | INFO     | intersect: 9075776908.47084
[2025-06-05 21:53:24] 2025-06-06 01:53:02,181 | INFO     | chi2: 1.4736348114640907
[2025-06-05 21:53:24] 2025-06-06 01:53:02,181 | INFO     | current chi2=1.4736348114640907 (change=53.90980984067886 %)
[2025-06-05 21:53:24] 2025-06-06 01:53:02,182 | INFO     | sum of square deviations: 22162173942.443455
[2025-06-05 21:53:24] 2025-06-06 01:53:02,187 | INFO     | sum of deviations: -133529733822.08923
[2025-06-05 21:53:24] 2025-06-06 01:53:02,187 | INFO     | mean x: 1749162137.1349397
[2025-06-05 21:53:24] 2025-06-06 01:53:02,187 | INFO     | mean y: 2216387.2337349397
[2025-06-05 21:53:24] 2025-06-06 01:53:02,188 | INFO     | -- intersect: 10541126296.969505
[2025-06-05 21:53:24] 2025-06-06 01:53:02,188 | INFO     | intersect: 10541126296.969505
[2025-06-05 21:53:24] 2025-06-06 01:53:02,188 | INFO     | chi2: 1.3853927813599713
[2025-06-05 21:53:24] 2025-06-06 01:53:02,189 | INFO     | current chi2=1.3853927813599713 (change=5.988052767052159 %)
[2025-06-05 21:53:24] 2025-06-06 01:53:02,189 | INFO     | left removable region: 20
[2025-06-05 21:53:24] 2025-06-06 01:53:02,189 | INFO     | sum of square deviations: 19696427425.22297
[2025-06-05 21:53:24] 2025-06-06 01:53:02,194 | INFO     | sum of deviations: -75502578544.9925
[2025-06-05 21:53:24] 2025-06-06 01:53:02,194 | INFO     | mean x: 1749162259.1303258
[2025-06-05 21:53:24] 2025-06-06 01:53:02,195 | INFO     | mean y: 2218814.172932331
[2025-06-05 21:53:24] 2025-06-06 01:53:02,195 | INFO     | -- intersect: 6707305884.369314
[2025-06-05 21:53:24] 2025-06-06 01:53:02,195 | INFO     | intersect: 6707305884.369314
[2025-06-05 21:53:24] 2025-06-06 01:53:02,196 | INFO     | chi2: 0.563754674845904
[2025-06-05 21:53:24] 2025-06-06 01:53:02,196 | INFO     | -- intersect: 6707305884.369314
[2025-06-05 21:53:24] 2025-06-06 01:53:02,196 | INFO     | current memory leak: -3.83 B/s (using 399 data points, chi2=0.56)
[2025-06-05 21:53:24] 2025-06-06 01:53:02,197 | INFO     | ..............................
[2025-06-05 21:53:24] 2025-06-06 01:53:02,197 | INFO     | . Timing measurements:
[2025-06-05 21:53:24] 2025-06-06 01:53:02,197 | INFO     | . get job = 0 s
[2025-06-05 21:53:24] 2025-06-06 01:53:02,198 | INFO     | . initial setup = 4 s
[2025-06-05 21:53:24] 2025-06-06 01:53:02,198 | INFO     | . payload setup = 16 s
[2025-06-05 21:53:24] 2025-06-06 01:53:02,198 | INFO     | . stage-in = 0 s
[2025-06-05 21:53:24] 2025-06-06 01:53:02,198 | INFO     | . payload execution = 25878 s
[2025-06-05 21:53:24] 2025-06-06 01:53:02,198 | INFO     | . stage-out = 3 s
[2025-06-05 21:53:24] 2025-06-06 01:53:02,198 | INFO     | . log creation = 0 s
[2025-06-05 21:53:24] 2025-06-06 01:53:02,198 | INFO     | ..............................
[2025-06-05 21:53:24] 2025-06-06 01:53:02,339 | INFO     | 
[2025-06-05 21:53:24] 2025-06-06 01:53:02,340 | INFO     | job summary report
[2025-06-05 21:53:24] 2025-06-06 01:53:02,340 | INFO     | --------------------------------------------------
[2025-06-05 21:53:24] 2025-06-06 01:53:02,340 | INFO     | PanDA job id: 6668442545
[2025-06-05 21:53:24] 2025-06-06 01:53:02,340 | INFO     | task id: 44871837
[2025-06-05 21:53:24] 2025-06-06 01:53:02,340 | INFO     | errors: (none)
[2025-06-05 21:53:24] 2025-06-06 01:53:02,341 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 21:53:24] 2025-06-06 01:53:02,341 | INFO     | pilot state: finished 
[2025-06-05 21:53:24] 2025-06-06 01:53:02,341 | INFO     | transexitcode: 0
[2025-06-05 21:53:24] 2025-06-06 01:53:02,341 | INFO     | exeerrorcode: 0
[2025-06-05 21:53:24] 2025-06-06 01:53:02,341 | INFO     | exeerrordiag: 
[2025-06-05 21:53:24] 2025-06-06 01:53:02,341 | INFO     | exitcode: 0
[2025-06-05 21:53:24] 2025-06-06 01:53:02,341 | INFO     | exitmsg: OK
[2025-06-05 21:53:24] 2025-06-06 01:53:02,342 | INFO     | cpuconsumptiontime: 96285 s
[2025-06-05 21:53:24] 2025-06-06 01:53:02,342 | INFO     | nevents: 400
[2025-06-05 21:53:24] 2025-06-06 01:53:02,342 | INFO     | neventsw: 0
[2025-06-05 21:53:24] 2025-06-06 01:53:02,342 | INFO     | pid: 4118868
[2025-06-05 21:53:24] 2025-06-06 01:53:02,342 | INFO     | pgrp: 4118868
[2025-06-05 21:53:24] 2025-06-06 01:53:02,342 | INFO     | corecount: 10
[2025-06-05 21:53:24] 2025-06-06 01:53:02,342 | INFO     | event service: False
[2025-06-05 21:53:24] 2025-06-06 01:53:02,343 | INFO     | sizes: {0: 2397219, 1: 2397418, 8: 2397624, 12: 2397652, 25898: 2433328, 25899: 2433327, 25903: 2442508, 25911: 2442622}
[2025-06-05 21:53:24] 2025-06-06 01:53:02,343 | INFO     | --------------------------------------------------
[2025-06-05 21:53:24] 2025-06-06 01:53:02,343 | INFO     | 
[2025-06-05 21:53:24] 2025-06-06 01:53:02,343 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 21:53:24] 2025-06-06 01:53:02,368 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 21:53:24] 2025-06-06 01:53:02,369 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 21:53:24] 2025-06-06 01:53:02,369 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 21:53:24] 2025-06-06 01:53:02,369 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 21:53:24] 2025-06-06 01:53:02,370 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 21:53:24] 2025-06-06 01:53:02,370 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 21:53:24] 2025-06-06 01:53:02,370 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 21:53:24] 2025-06-06 01:53:02,370 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 21:53:24] 2025-06-06 01:53:02,370 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 21:53:24] 2025-06-06 01:53:02,370 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 21:53:24] 2025-06-06 01:53:02,371 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 21:53:24] 2025-06-06 01:53:02,371 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 21:53:24] 2025-06-06 01:53:02,371 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 21:53:24] 2025-06-06 01:53:02,371 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 21:53:24] 2025-06-06 01:53:02,371 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 21:53:24] 2025-06-06 01:53:02,372 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 21:53:24] 2025-06-06 01:53:02,372 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 21:53:24] 2025-06-06 01:53:02,372 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 21:53:24] 2025-06-06 01:53:02,372 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 21:53:24] 2025-06-06 01:53:02,372 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 21:53:24] 2025-06-06 01:53:02,372 | INFO     | job 6668442545 has completed (purged errors)
[2025-06-05 21:53:24] 2025-06-06 01:53:02,373 | INFO     | overall cleanup function is called
[2025-06-05 21:53:24] 2025-06-06 01:53:03,383 | INFO     | --- collectZombieJob: --- 10, [4118868]
[2025-06-05 21:53:24] 2025-06-06 01:53:03,383 | INFO     | zombie collector waiting for pid 4118868
[2025-06-05 21:53:24] 2025-06-06 01:53:03,384 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 21:53:24] 2025-06-06 01:53:03,384 | INFO     | collected zombie processes
[2025-06-05 21:53:24] 2025-06-06 01:53:03,384 | INFO     | will attempt to kill all subprocesses of pid=4118868
[2025-06-05 21:53:24] 2025-06-06 01:53:04,002 | INFO     | process IDs to be killed: [4118868] (in reverse order)
[2025-06-05 21:53:24] 2025-06-06 01:53:04,136 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 21:53:24] 2025-06-06 01:53:04,137 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 21:53:24] 2025-06-06 01:53:04,163 | INFO     | did not find any defunct processes belonging to 4118868
[2025-06-05 21:53:24] 2025-06-06 01:53:04,183 | INFO     | did not find any defunct processes belonging to 4118868
[2025-06-05 21:53:24] 2025-06-06 01:53:04,183 | INFO     | ready for new job
[2025-06-05 21:53:24] 2025-06-06 01:53:04,183 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 21:53:24] 2025-06-06 01:53:04,187 | INFO     | **************************************
[2025-06-05 21:53:24] 2025-06-06 01:53:04,187 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 21:53:24] 2025-06-06 01:53:04,188 | INFO     | **************************************
[2025-06-05 21:53:24] 2025-06-06 01:53:04,188 | INFO     | 
[2025-06-05 21:53:24] 2025-06-06 01:53:04,204 | INFO     | architecture information:
[2025-06-05 21:53:24] 2025-06-06 01:53:04,205 | INFO     | executing command: cat /etc/os-release
[2025-06-05 21:53:24] 2025-06-06 01:53:04,223 | INFO     | cat /etc/os-release:
[2025-06-05 21:53:24] NAME="CentOS Linux"
[2025-06-05 21:53:24] VERSION="7 (Core)"
[2025-06-05 21:53:24] ID="centos"
[2025-06-05 21:53:24] ID_LIKE="rhel fedora"
[2025-06-05 21:53:24] VERSION_ID="7"
[2025-06-05 21:53:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 21:53:24] ANSI_COLOR="0;31"
[2025-06-05 21:53:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 21:53:24] HOME_URL="https://www.centos.org/"
[2025-06-05 21:53:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 21:53:24] 
[2025-06-05 21:53:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 21:53:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 21:53:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 21:53:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 21:53:24] 
[2025-06-05 21:53:24] 2025-06-06 01:53:04,224 | INFO     | **************************************
[2025-06-05 21:53:24] 2025-06-06 01:53:04,736 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 21:53:24] 2025-06-06 01:53:04,778 | INFO     | sufficient remaining disk space (53854863360 B)
[2025-06-05 21:53:24] 2025-06-06 01:53:04,780 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 21:53:24] 2025-06-06 01:53:04,780 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 21:53:24] 2025-06-06 01:53:04,781 | INFO     | update_server=False
[2025-06-05 21:53:24] 2025-06-06 01:53:04,781 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 21:53:24] 2025-06-06 01:53:04,806 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 21:53:24] 2025-06-06 01:53:05,189 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 21:53:24] 2025-06-06 01:53:05,232 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 21:53:24] 2025-06-06 01:53:05,233 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 21:53:24] 2025-06-06 01:53:05,233 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:53:24] 2025-06-06 01:53:05,233 | INFO     | will abort loop
[2025-06-05 21:53:24] 2025-06-06 01:53:05,267 | INFO     | PID=4103863 has CPU usage=17.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 21:53:24] 2025-06-06 01:53:05,268 | INFO     | .. there are 22 such processes running
[2025-06-05 21:53:24] 2025-06-06 01:53:05,268 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 21:53:24] 2025-06-06 01:53:05,269 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 21:53:24] 2025-06-06 01:53:05,269 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 21:53:24] 2025-06-06 01:53:05,364 | INFO     | all job control threads have been joined
[2025-06-05 21:53:24] 2025-06-06 01:53:05,622 | INFO     | all data control threads have been joined
[2025-06-05 21:53:24] 2025-06-06 01:53:05,787 | INFO     | [job] retrieve thread has finished
[2025-06-05 21:53:24] 2025-06-06 01:53:06,130 | INFO     | all payload control threads have been joined
[2025-06-05 21:53:24] 2025-06-06 01:53:06,243 | INFO     | [job] job monitor thread has finished
[2025-06-05 21:53:24] 2025-06-06 01:53:06,370 | INFO     | [job] control thread has finished
[2025-06-05 21:53:24] 2025-06-06 01:53:06,385 | INFO     | [data] copytool_in thread has finished
[2025-06-05 21:53:24] 2025-06-06 01:53:06,529 | INFO     | [payload] failed_post thread has finished
[2025-06-05 21:53:24] 2025-06-06 01:53:06,630 | INFO     | [data] control thread has finished
[2025-06-05 21:53:24] 2025-06-06 01:53:06,675 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 21:53:24] 2025-06-06 01:53:06,814 | INFO     | [data] copytool_out thread has finished
[2025-06-05 21:53:24] 2025-06-06 01:53:06,863 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 21:53:24] 2025-06-06 01:53:06,883 | INFO     | [job] validate thread has finished
[2025-06-05 21:53:24] 2025-06-06 01:53:07,034 | INFO     | [payload] validate_post thread has finished
[2025-06-05 21:53:24] 2025-06-06 01:53:07,135 | INFO     | [payload] control thread has finished
[2025-06-05 21:53:24] 2025-06-06 01:53:07,178 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 21:53:24] 2025-06-06 01:53:07,352 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:53:24] 2025-06-06 01:53:08,357 | INFO     | [job] queue monitor thread has finished
[2025-06-05 21:53:24] 2025-06-06 01:53:09,212 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 21:53:24] 2025-06-06 01:53:15,458 | INFO     | job.realtimelogging is not enabled
[2025-06-05 21:53:24] 2025-06-06 01:53:16,463 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 21:53:24] 2025-06-06 01:53:18,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140072740042560)>', '<ExcThread(monitor, started 140072011679488)>']
[2025-06-05 21:53:24] 2025-06-06 01:53:18,340 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 21:53:24] 2025-06-06 01:53:18,340 | INFO     | [monitor] control thread has ended
[2025-06-05 21:53:24] 2025-06-06 01:53:23,271 | INFO     | all workflow threads have been joined
[2025-06-05 21:53:24] 2025-06-06 01:53:23,272 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 21:53:24] 2025-06-06 01:53:23,276 | INFO     | traces error code: 0
[2025-06-05 21:53:24] 2025-06-06 01:53:23,276 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 21:53:24] 2025-06-06 01:53:23,543 [wrapper] ==== pilot stdout END ====
[2025-06-05 21:53:24] 2025-06-06 01:53:23,548 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 21:53:24] 2025-06-06 01:53:23,552 [wrapper] pilotpid: 4103863
[2025-06-05 21:53:24] 2025-06-06 01:53:23,560 [wrapper] Pilot exit status: 0
[2025-06-05 21:53:24] 2025-06-06 01:53:23,661 [wrapper] pandaids: 6668442545
[2025-06-05 21:53:24] 2025-06-06 01:53:23,873 [wrapper] cleanup supervisor_pilot 1681598 4103864
[2025-06-05 21:53:24] 2025-06-06 01:53:23,876 [wrapper] Test setup, not cleaning
[2025-06-05 21:53:24] 2025-06-06 01:53:23,880 [wrapper] apfmon messages muted
[2025-06-05 21:53:24] 2025-06-06 01:53:23,883 [wrapper] ==== wrapper stdout END ====
[2025-06-05 21:53:24] 2025-06-06 01:53:23,892 [wrapper] ==== wrapper stderr END ====
[2025-06-05 21:53:24]  *** Error codes and diagnostics ***
[2025-06-05 21:53:24]     "exeErrorCode": 0,
[2025-06-05 21:53:24]     "exeErrorDiag": "",
[2025-06-05 21:53:24]     "pilotErrorCode": 0,
[2025-06-05 21:53:24]     "pilotErrorDiag": "",
[2025-06-05 21:53:24]  *** Listing of results directory ***
[2025-06-05 21:53:24] total 410912
[2025-06-05 21:53:24] -rw-r--r--. 1 boincer umatlas    495897 May 28 07:45 pilot3.tar.gz
[2025-06-05 21:53:24] -rwx------. 1 boincer umatlas     37140 May 28 08:39 runpilot2-wrapper.sh
[2025-06-05 21:53:24] -rw-r--r--. 1 boincer umatlas      5111 May 28 08:39 queuedata.json
[2025-06-05 21:53:24] -rw-r--r--. 1 boincer umatlas       100 Jun  5 14:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 21:53:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 14:40 run_atlas
[2025-06-05 21:53:24] -rw-r--r--. 1 boincer umatlas       105 Jun  5 14:40 job.xml
[2025-06-05 21:53:24] -rw-r--r--. 2 boincer umatlas 224002457 Jun  5 14:40 EVNT.44871834._003296.pool.root.1
[2025-06-05 21:53:24] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 14:40 start_atlas.sh
[2025-06-05 21:53:24] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 14:40 shared
[2025-06-05 21:53:24] -rw-r--r--. 2 boincer umatlas    508872 Jun  5 14:40 input.tar.gz
[2025-06-05 21:53:24] -rw-r--r--. 1 boincer umatlas         0 Jun  5 14:40 boinc_lockfile
[2025-06-05 21:53:24] -rw-r--r--. 1 boincer umatlas      2558 Jun  5 14:40 pandaJob.out
[2025-06-05 21:53:24] -rw-------. 1 boincer umatlas    987543 Jun  5 14:40 agis_schedconf.cvmfs.json
[2025-06-05 21:53:24] drwx------. 4 boincer umatlas      4096 Jun  5 14:40 pilot3
[2025-06-05 21:53:24] -rw-r--r--. 1 boincer umatlas      6522 Jun  5 21:48 init_data.xml
[2025-06-05 21:53:24] -rw-------. 1 boincer umatlas 187664968 Jun  5 21:52 HITS.44871837._084468.pool.root.1
[2025-06-05 21:53:24] -rw-r--r--. 1 boincer umatlas       531 Jun  5 21:52 boinc_task_state.xml
[2025-06-05 21:53:24] -rw-------. 1 boincer umatlas        95 Jun  5 21:52 pilot_heartbeat.json
[2025-06-05 21:53:24] -rw-------. 1 boincer umatlas      1039 Jun  5 21:52 memory_monitor_summary.json
[2025-06-05 21:53:24] -rw-------. 1 boincer umatlas   1598969 Jun  5 21:52 agis_ddmendpoints.agis.ALL.json
[2025-06-05 21:53:24] -rw-------. 1 boincer umatlas    514266 Jun  5 21:52 log.44871837._084468.job.log.tgz.1
[2025-06-05 21:53:24] -rw-------. 1 boincer umatlas      7717 Jun  5 21:53 heartbeat.json
[2025-06-05 21:53:24] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 21:53 boinc_mmap_file
[2025-06-05 21:53:24] -rw-r--r--. 1 boincer umatlas        28 Jun  5 21:53 wrapper_checkpoint.txt
[2025-06-05 21:53:24] -rw-------. 1 boincer umatlas      5007 Jun  5 21:53 pilotlog.txt
[2025-06-05 21:53:24] -rw-------. 1 boincer umatlas   2123430 Jun  5 21:53 log.44871837._084468.job.log.1
[2025-06-05 21:53:24] -rw-------. 1 boincer umatlas       357 Jun  5 21:53 output.list
[2025-06-05 21:53:24] -rw-r--r--. 1 boincer umatlas       620 Jun  5 21:53 runtime_log
[2025-06-05 21:53:24] -rw-------. 1 boincer umatlas   2652160 Jun  5 21:53 result.tar.gz
[2025-06-05 21:53:24] -rw-------. 1 boincer umatlas       657 Jun  5 21:53 vRwKDmWFVe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWAcKDmWPAcWn.diag
[2025-06-05 21:53:24] -rw-r--r--. 1 boincer umatlas      8657 Jun  5 21:53 runtime_log.err
[2025-06-05 21:53:24] -rw-r--r--. 1 boincer umatlas     21175 Jun  5 21:53 stderr.txt
[2025-06-05 21:53:24] HITS file was successfully produced:
[2025-06-05 21:53:24] -rw-------. 1 boincer umatlas 187664968 Jun  5 21:52 shared/HITS.pool.root.1
[2025-06-05 21:53:24]  *** Contents of shared directory: ***
[2025-06-05 21:53:24] total 405136
[2025-06-05 21:53:24] -rw-r--r--. 2 boincer umatlas 224002457 Jun  5 14:40 ATLAS.root_0
[2025-06-05 21:53:24] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 14:40 start_atlas.sh
[2025-06-05 21:53:24] -rw-r--r--. 2 boincer umatlas    508872 Jun  5 14:40 input.tar.gz
[2025-06-05 21:53:24] -rw-------. 1 boincer umatlas 187664968 Jun  5 21:52 HITS.pool.root.1
[2025-06-05 21:53:24] -rw-------. 1 boincer umatlas   2652160 Jun  5 21:53 result.tar.gz
21:53:25 (4099204): run_atlas exited; CPU time 97610.473339
21:53:25 (4099204): called boinc_finish(0)

</stderr_txt>
]]>

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