Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:29:58 (2377295): wrapper (7.7.26015): starting
14:29:58 (2377295): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 14:29:58] Arguments: --nthreads 8
[2025-06-05 14:29:58] Threads: 8
[2025-06-05 14:29:58] Checking for CVMFS
[2025-06-05 14:29:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 14:29:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 14:29:58] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 14:29:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 14:29:59] 2.12.6.0 1636016 25290 452272 146829 0 344 27995945 32935937 22568 16776704 1 137460005 99.627 123804357 26671 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 14:29:59] CVMFS is ok
[2025-06-05 14:29:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 14:29:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 14:29:59] Further information can be found at the LHC@home message board.
[2025-06-05 14:29:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 14:29:59] Checking for apptainer binary...
[2025-06-05 14:29:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 14:29:59] Running /usr/bin/apptainer --version
[2025-06-05 14:29:59] apptainer version 1.4.1-1.el9
[2025-06-05 14:29:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 14:29:59] c6-2-11-4.aglt2.org
[2025-06-05 14:29:59] apptainer works
[2025-06-05 14:29:59] Set ATHENA_PROC_NUMBER=8
[2025-06-05 14:29:59] Set ATHENA_CORE_NUMBER=8
[2025-06-05 14:29:59] Starting ATLAS job with PandaID=6668440884
[2025-06-05 14:29:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 16:58:26]  *** The last 200 lines of the pilot log: ***
[2025-06-05 16:58:26] 2025-06-05 20:57:59,998 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 16:58:26] 2025-06-05 20:58:01,154 | INFO     | monitor loop #610: job 0:6668440884 is in state 'finished'
[2025-06-05 16:58:26] 2025-06-05 20:58:01,154 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 16:58:26] 2025-06-05 20:58:03,663 | INFO     | monitor loop #611: job 0:6668440884 is in state 'finished'
[2025-06-05 16:58:26] 2025-06-05 20:58:03,663 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 16:58:26] 2025-06-05 20:58:06,082 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 16:58:26] 2025-06-05 20:58:06,082 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668440884/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 16:58:26] 2025-06-05 20:58:06,083 | INFO     | extracted standard info from prmon json
[2025-06-05 16:58:26] 2025-06-05 20:58:06,083 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 16:58:26] 2025-06-05 20:58:06,083 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 16:58:26] 2025-06-05 20:58:06,084 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 16:58:26] 2025-06-05 20:58:06,084 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 16:58:26] 2025-06-05 20:58:06,090 | INFO     | fitting pss+swap vs Time
[2025-06-05 16:58:26] 2025-06-05 20:58:06,090 | INFO     | sum of square deviations: 925853059.9930569
[2025-06-05 16:58:26] 2025-06-05 20:58:06,091 | INFO     | sum of deviations: -15019217967.180557
[2025-06-05 16:58:26] 2025-06-05 20:58:06,091 | INFO     | mean x: 1749152655.5069444
[2025-06-05 16:58:26] 2025-06-05 20:58:06,091 | INFO     | mean y: 2264100.1805555555
[2025-06-05 16:58:26] 2025-06-05 20:58:06,091 | INFO     | -- intersect: 28377074451.974922
[2025-06-05 16:58:26] 2025-06-05 20:58:06,092 | INFO     | intersect: 28377074451.974922
[2025-06-05 16:58:26] 2025-06-05 20:58:06,092 | INFO     | chi2: 1.9406608523636155
[2025-06-05 16:58:26] 2025-06-05 20:58:06,092 | INFO     | sum of square deviations: 832716734.9928035
[2025-06-05 16:58:26] 2025-06-05 20:58:06,102 | INFO     | sum of deviations: -13216363633.640291
[2025-06-05 16:58:26] 2025-06-05 20:58:06,102 | INFO     | mean x: 1749152503.0071943
[2025-06-05 16:58:26] 2025-06-05 20:58:06,102 | INFO     | mean y: 2267023.64028777
[2025-06-05 16:58:26] 2025-06-05 20:58:06,102 | INFO     | -- intersect: 27763730867.206444
[2025-06-05 16:58:26] 2025-06-05 20:58:06,102 | INFO     | intersect: 27763730867.206444
[2025-06-05 16:58:26] 2025-06-05 20:58:06,103 | INFO     | chi2: 1.9387079998695262
[2025-06-05 16:58:26] 2025-06-05 20:58:06,103 | INFO     | current chi2=1.9387079998695262 (change=0.1006282211397633 %)
[2025-06-05 16:58:26] 2025-06-05 20:58:06,103 | INFO     | right removable region: 138
[2025-06-05 16:58:26] 2025-06-05 20:58:06,103 | INFO     | sum of square deviations: 832716124.9928035
[2025-06-05 16:58:26] 2025-06-05 20:58:06,104 | INFO     | sum of deviations: -35376181244.06475
[2025-06-05 16:58:26] 2025-06-05 20:58:06,104 | INFO     | mean x: 1749152808.0071943
[2025-06-05 16:58:26] 2025-06-05 20:58:06,104 | INFO     | mean y: 2296946.0647482015
[2025-06-05 16:58:26] 2025-06-05 20:58:06,104 | INFO     | -- intersect: 74311350058.4469
[2025-06-05 16:58:26] 2025-06-05 20:58:06,104 | INFO     | intersect: 74311350058.4469
[2025-06-05 16:58:26] 2025-06-05 20:58:06,105 | INFO     | chi2: 0.37497701902150576
[2025-06-05 16:58:26] 2025-06-05 20:58:06,105 | INFO     | current chi2=0.37497701902150576 (change=80.67786967698117 %)
[2025-06-05 16:58:26] 2025-06-05 20:58:06,105 | INFO     | sum of square deviations: 746044427.4925351
[2025-06-05 16:58:26] 2025-06-05 20:58:06,106 | INFO     | sum of deviations: -34375257007.253746
[2025-06-05 16:58:26] 2025-06-05 20:58:06,106 | INFO     | mean x: 1749152960.5074627
[2025-06-05 16:58:26] 2025-06-05 20:58:06,107 | INFO     | mean y: 2295082.7537313434
[2025-06-05 16:58:26] 2025-06-05 20:58:06,108 | INFO     | -- intersect: 80597471920.32141
[2025-06-05 16:58:26] 2025-06-05 20:58:06,108 | INFO     | intersect: 80597471920.32141
[2025-06-05 16:58:26] 2025-06-05 20:58:06,108 | INFO     | chi2: 0.33811498686400143
[2025-06-05 16:58:26] 2025-06-05 20:58:06,108 | INFO     | current chi2=0.33811498686400143 (change=9.830477679324186 %)
[2025-06-05 16:58:26] 2025-06-05 20:58:06,108 | INFO     | left removable region: 20
[2025-06-05 16:58:26] 2025-06-05 20:58:06,108 | INFO     | sum of square deviations: 509433235.49152595
[2025-06-05 16:58:26] 2025-06-05 20:58:06,109 | INFO     | sum of deviations: -24171770333.949142
[2025-06-05 16:58:26] 2025-06-05 20:58:06,109 | INFO     | mean x: 1749153082.5084746
[2025-06-05 16:58:26] 2025-06-05 20:58:06,109 | INFO     | mean y: 2282801.4491525423
[2025-06-05 16:58:26] 2025-06-05 20:58:06,109 | INFO     | -- intersect: 82996723767.8304
[2025-06-05 16:58:26] 2025-06-05 20:58:06,109 | INFO     | intersect: 82996723767.8304
[2025-06-05 16:58:26] 2025-06-05 20:58:06,110 | INFO     | chi2: 0.3166615192541099
[2025-06-05 16:58:26] 2025-06-05 20:58:06,110 | INFO     | -- intersect: 82996723767.8304
[2025-06-05 16:58:26] 2025-06-05 20:58:06,110 | INFO     | current memory leak: -47.45 B/s (using 118 data points, chi2=0.32)
[2025-06-05 16:58:26] 2025-06-05 20:58:06,111 | INFO     | ..............................
[2025-06-05 16:58:26] 2025-06-05 20:58:06,111 | INFO     | . Timing measurements:
[2025-06-05 16:58:26] 2025-06-05 20:58:06,111 | INFO     | . get job = 0 s
[2025-06-05 16:58:26] 2025-06-05 20:58:06,111 | INFO     | . initial setup = 3 s
[2025-06-05 16:58:26] 2025-06-05 20:58:06,111 | INFO     | . payload setup = 19 s
[2025-06-05 16:58:26] 2025-06-05 20:58:06,111 | INFO     | . stage-in = 0 s
[2025-06-05 16:58:26] 2025-06-05 20:58:06,111 | INFO     | . payload execution = 8790 s
[2025-06-05 16:58:26] 2025-06-05 20:58:06,111 | INFO     | . stage-out = 1 s
[2025-06-05 16:58:26] 2025-06-05 20:58:06,111 | INFO     | . log creation = 0 s
[2025-06-05 16:58:26] 2025-06-05 20:58:06,111 | INFO     | ..............................
[2025-06-05 16:58:26] 2025-06-05 20:58:06,227 | INFO     | 
[2025-06-05 16:58:26] 2025-06-05 20:58:06,228 | INFO     | job summary report
[2025-06-05 16:58:26] 2025-06-05 20:58:06,228 | INFO     | --------------------------------------------------
[2025-06-05 16:58:26] 2025-06-05 20:58:06,228 | INFO     | PanDA job id: 6668440884
[2025-06-05 16:58:26] 2025-06-05 20:58:06,228 | INFO     | task id: 44871837
[2025-06-05 16:58:26] 2025-06-05 20:58:06,228 | INFO     | errors: (none)
[2025-06-05 16:58:26] 2025-06-05 20:58:06,228 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 16:58:26] 2025-06-05 20:58:06,228 | INFO     | pilot state: finished 
[2025-06-05 16:58:26] 2025-06-05 20:58:06,228 | INFO     | transexitcode: 0
[2025-06-05 16:58:26] 2025-06-05 20:58:06,228 | INFO     | exeerrorcode: 0
[2025-06-05 16:58:26] 2025-06-05 20:58:06,228 | INFO     | exeerrordiag: 
[2025-06-05 16:58:26] 2025-06-05 20:58:06,228 | INFO     | exitcode: 0
[2025-06-05 16:58:26] 2025-06-05 20:58:06,228 | INFO     | exitmsg: OK
[2025-06-05 16:58:26] 2025-06-05 20:58:06,228 | INFO     | cpuconsumptiontime: 54833 s
[2025-06-05 16:58:26] 2025-06-05 20:58:06,228 | INFO     | nevents: 400
[2025-06-05 16:58:26] 2025-06-05 20:58:06,229 | INFO     | neventsw: 0
[2025-06-05 16:58:26] 2025-06-05 20:58:06,229 | INFO     | pid: 2389135
[2025-06-05 16:58:26] 2025-06-05 20:58:06,229 | INFO     | pgrp: 2389135
[2025-06-05 16:58:26] 2025-06-05 20:58:06,229 | INFO     | corecount: 8
[2025-06-05 16:58:26] 2025-06-05 20:58:06,229 | INFO     | event service: False
[2025-06-05 16:58:26] 2025-06-05 20:58:06,229 | INFO     | sizes: {0: 2397221, 1: 2397420, 12: 2397420, 13: 2397654, 23: 2397710, 8813: 2425715, 8814: 2425842, 8815: 2434839, 8817: 2434895, 8825: 2435065}
[2025-06-05 16:58:26] 2025-06-05 20:58:06,229 | INFO     | --------------------------------------------------
[2025-06-05 16:58:26] 2025-06-05 20:58:06,229 | INFO     | 
[2025-06-05 16:58:26] 2025-06-05 20:58:06,229 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 16:58:26] 2025-06-05 20:58:06,251 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 16:58:26] 2025-06-05 20:58:06,251 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 16:58:26] 2025-06-05 20:58:06,251 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 16:58:26] 2025-06-05 20:58:06,252 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 16:58:26] 2025-06-05 20:58:06,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 16:58:26] 2025-06-05 20:58:06,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 16:58:26] 2025-06-05 20:58:06,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 16:58:26] 2025-06-05 20:58:06,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 16:58:26] 2025-06-05 20:58:06,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 16:58:26] 2025-06-05 20:58:06,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 16:58:26] 2025-06-05 20:58:06,252 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 16:58:26] 2025-06-05 20:58:06,252 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 16:58:26] 2025-06-05 20:58:06,252 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 16:58:26] 2025-06-05 20:58:06,252 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 16:58:26] 2025-06-05 20:58:06,252 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 16:58:26] 2025-06-05 20:58:06,253 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 16:58:26] 2025-06-05 20:58:06,253 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 16:58:26] 2025-06-05 20:58:06,253 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 16:58:26] 2025-06-05 20:58:06,253 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 16:58:26] 2025-06-05 20:58:06,253 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 16:58:26] 2025-06-05 20:58:06,253 | INFO     | job 6668440884 has completed (purged errors)
[2025-06-05 16:58:26] 2025-06-05 20:58:06,253 | INFO     | overall cleanup function is called
[2025-06-05 16:58:26] 2025-06-05 20:58:07,262 | INFO     | --- collectZombieJob: --- 10, [2389135]
[2025-06-05 16:58:26] 2025-06-05 20:58:07,262 | INFO     | zombie collector waiting for pid 2389135
[2025-06-05 16:58:26] 2025-06-05 20:58:07,262 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 16:58:26] 2025-06-05 20:58:07,262 | INFO     | collected zombie processes
[2025-06-05 16:58:26] 2025-06-05 20:58:07,262 | INFO     | will attempt to kill all subprocesses of pid=2389135
[2025-06-05 16:58:26] 2025-06-05 20:58:07,714 | INFO     | process IDs to be killed: [2389135] (in reverse order)
[2025-06-05 16:58:26] 2025-06-05 20:58:07,841 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 16:58:26] 2025-06-05 20:58:07,841 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 16:58:26] 2025-06-05 20:58:07,857 | INFO     | did not find any defunct processes belonging to 2389135
[2025-06-05 16:58:26] 2025-06-05 20:58:07,873 | INFO     | did not find any defunct processes belonging to 2389135
[2025-06-05 16:58:26] 2025-06-05 20:58:07,873 | INFO     | ready for new job
[2025-06-05 16:58:26] 2025-06-05 20:58:07,873 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 16:58:26] 2025-06-05 20:58:07,874 | INFO     | **************************************
[2025-06-05 16:58:26] 2025-06-05 20:58:07,875 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 16:58:26] 2025-06-05 20:58:07,875 | INFO     | **************************************
[2025-06-05 16:58:26] 2025-06-05 20:58:07,875 | INFO     | 
[2025-06-05 16:58:26] 2025-06-05 20:58:07,880 | INFO     | architecture information:
[2025-06-05 16:58:26] 2025-06-05 20:58:07,880 | INFO     | executing command: cat /etc/os-release
[2025-06-05 16:58:26] 2025-06-05 20:58:07,901 | INFO     | cat /etc/os-release:
[2025-06-05 16:58:26] NAME="CentOS Linux"
[2025-06-05 16:58:26] VERSION="7 (Core)"
[2025-06-05 16:58:26] ID="centos"
[2025-06-05 16:58:26] ID_LIKE="rhel fedora"
[2025-06-05 16:58:26] VERSION_ID="7"
[2025-06-05 16:58:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 16:58:26] ANSI_COLOR="0;31"
[2025-06-05 16:58:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 16:58:26] HOME_URL="https://www.centos.org/"
[2025-06-05 16:58:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 16:58:26] 
[2025-06-05 16:58:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 16:58:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 16:58:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 16:58:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 16:58:26] 
[2025-06-05 16:58:26] 2025-06-05 20:58:07,901 | INFO     | **************************************
[2025-06-05 16:58:26] 2025-06-05 20:58:08,405 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 16:58:26] 2025-06-05 20:58:08,432 | INFO     | sufficient remaining disk space (96595869696 B)
[2025-06-05 16:58:26] 2025-06-05 20:58:08,432 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 16:58:26] 2025-06-05 20:58:08,432 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 16:58:26] 2025-06-05 20:58:08,433 | INFO     | update_server=False
[2025-06-05 16:58:26] 2025-06-05 20:58:08,433 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 16:58:26] 2025-06-05 20:58:08,434 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 16:58:26] 2025-06-05 20:58:08,679 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 16:58:26] 2025-06-05 20:58:08,679 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 16:58:26] 2025-06-05 20:58:08,679 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:58:26] 2025-06-05 20:58:08,679 | INFO     | will abort loop
[2025-06-05 16:58:26] 2025-06-05 20:58:08,689 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 16:58:26] 2025-06-05 20:58:08,689 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 16:58:26] 2025-06-05 20:58:08,689 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 16:58:26] 2025-06-05 20:58:08,706 | INFO     | all job control threads have been joined
[2025-06-05 16:58:26] 2025-06-05 20:58:08,719 | INFO     | all data control threads have been joined
[2025-06-05 16:58:26] 2025-06-05 20:58:08,862 | INFO     | all payload control threads have been joined
[2025-06-05 16:58:26] 2025-06-05 20:58:09,327 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 16:58:26] 2025-06-05 20:58:09,439 | INFO     | [job] retrieve thread has finished
[2025-06-05 16:58:26] 2025-06-05 20:58:09,643 | INFO     | [job] validate thread has finished
[2025-06-05 16:58:26] 2025-06-05 20:58:09,685 | INFO     | [job] job monitor thread has finished
[2025-06-05 16:58:26] 2025-06-05 20:58:09,712 | INFO     | [job] control thread has finished
[2025-06-05 16:58:26] 2025-06-05 20:58:09,725 | INFO     | [data] control thread has finished
[2025-06-05 16:58:26] 2025-06-05 20:58:09,868 | INFO     | [payload] control thread has finished
[2025-06-05 16:58:26] 2025-06-05 20:58:10,001 | INFO     | [payload] failed_post thread has finished
[2025-06-05 16:58:26] 2025-06-05 20:58:10,192 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 16:58:26] 2025-06-05 20:58:10,230 | INFO     | [payload] validate_post thread has finished
[2025-06-05 16:58:26] 2025-06-05 20:58:10,690 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 16:58:26] 2025-06-05 20:58:10,809 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 16:58:26] 2025-06-05 20:58:10,837 | INFO     | [data] copytool_in thread has finished
[2025-06-05 16:58:26] 2025-06-05 20:58:11,242 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:58:26] 2025-06-05 20:58:11,334 | INFO     | [data] copytool_out thread has finished
[2025-06-05 16:58:26] 2025-06-05 20:58:12,248 | INFO     | [job] queue monitor thread has finished
[2025-06-05 16:58:26] 2025-06-05 20:58:12,443 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 16:58:26] 2025-06-05 20:58:19,293 | INFO     | job.realtimelogging is not enabled
[2025-06-05 16:58:26] 2025-06-05 20:58:20,299 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 16:58:26] 2025-06-05 20:58:21,402 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140594249008960)>', '<ExcThread(monitor, started 140593892136704)>']
[2025-06-05 16:58:26] 2025-06-05 20:58:21,767 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 16:58:26] 2025-06-05 20:58:21,767 | INFO     | [monitor] control thread has ended
[2025-06-05 16:58:26] 2025-06-05 20:58:26,427 | INFO     | all workflow threads have been joined
[2025-06-05 16:58:26] 2025-06-05 20:58:26,427 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 16:58:26] 2025-06-05 20:58:26,427 | INFO     | traces error code: 0
[2025-06-05 16:58:26] 2025-06-05 20:58:26,427 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 16:58:26] 2025-06-05 20:58:26,594 [wrapper] ==== pilot stdout END ====
[2025-06-05 16:58:26] 2025-06-05 20:58:26,598 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 16:58:26] 2025-06-05 20:58:26,601 [wrapper] pilotpid: 2381263
[2025-06-05 16:58:26] 2025-06-05 20:58:26,603 [wrapper] Pilot exit status: 0
[2025-06-05 16:58:26] 2025-06-05 20:58:26,675 [wrapper] pandaids: 6668440884
[2025-06-05 16:58:26] 2025-06-05 20:58:26,752 [wrapper] cleanup supervisor_pilot 2737745 2381264
[2025-06-05 16:58:26] 2025-06-05 20:58:26,755 [wrapper] Test setup, not cleaning
[2025-06-05 16:58:26] 2025-06-05 20:58:26,757 [wrapper] apfmon messages muted
[2025-06-05 16:58:26] 2025-06-05 20:58:26,759 [wrapper] ==== wrapper stdout END ====
[2025-06-05 16:58:26] 2025-06-05 20:58:26,762 [wrapper] ==== wrapper stderr END ====
[2025-06-05 16:58:26]  *** Error codes and diagnostics ***
[2025-06-05 16:58:26]     "exeErrorCode": 0,
[2025-06-05 16:58:26]     "exeErrorDiag": "",
[2025-06-05 16:58:26]     "pilotErrorCode": 0,
[2025-06-05 16:58:26]     "pilotErrorDiag": "",
[2025-06-05 16:58:26]  *** Listing of results directory ***
[2025-06-05 16:58:26] total 424524
[2025-06-05 16:58:26] -rw-r--r--. 1 boincer umatlas    495897 May 28 07:45 pilot3.tar.gz
[2025-06-05 16:58:26] -rwx------. 1 boincer umatlas     37140 May 28 08:28 runpilot2-wrapper.sh
[2025-06-05 16:58:26] -rw-r--r--. 1 boincer umatlas      5111 May 28 08:28 queuedata.json
[2025-06-05 16:58:26] -rw-r--r--. 1 boincer umatlas       100 Jun  5 14:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 16:58:26] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 14:29 run_atlas
[2025-06-05 16:58:26] -rw-r--r--. 1 boincer umatlas       105 Jun  5 14:29 job.xml
[2025-06-05 16:58:26] -rw-r--r--. 2 boincer umatlas 225991758 Jun  5 14:29 EVNT.44871834._003285.pool.root.1
[2025-06-05 16:58:26] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 14:29 start_atlas.sh
[2025-06-05 16:58:26] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 14:29 shared
[2025-06-05 16:58:26] -rw-r--r--. 2 boincer umatlas    508876 Jun  5 14:29 input.tar.gz
[2025-06-05 16:58:26] -rw-r--r--. 1 boincer umatlas         0 Jun  5 14:29 boinc_lockfile
[2025-06-05 16:58:26] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 14:29 pandaJob.out
[2025-06-05 16:58:26] -rw-------. 1 boincer umatlas    987543 Jun  5 14:30 agis_schedconf.cvmfs.json
[2025-06-05 16:58:26] -rw-------. 1 boincer umatlas   1598969 Jun  5 14:30 agis_ddmendpoints.agis.ALL.json
[2025-06-05 16:58:26] drwx------. 4 boincer umatlas      4096 Jun  5 14:30 pilot3
[2025-06-05 16:58:26] -rw-r--r--. 1 boincer umatlas      6856 Jun  5 16:45 init_data.xml
[2025-06-05 16:58:26] -rw-------. 1 boincer umatlas 202573696 Jun  5 16:57 HITS.44871837._084213.pool.root.1
[2025-06-05 16:58:26] -rw-r--r--. 1 boincer umatlas       530 Jun  5 16:57 boinc_task_state.xml
[2025-06-05 16:58:26] -rw-------. 1 boincer umatlas      1040 Jun  5 16:57 memory_monitor_summary.json
[2025-06-05 16:58:26] -rw-------. 1 boincer umatlas    359052 Jun  5 16:57 log.44871837._084213.job.log.tgz.1
[2025-06-05 16:58:26] -rw-------. 1 boincer umatlas        95 Jun  5 16:58 pilot_heartbeat.json
[2025-06-05 16:58:26] -rw-------. 1 boincer umatlas      7729 Jun  5 16:58 heartbeat.json
[2025-06-05 16:58:26] -rw-r--r--. 1 boincer umatlas        27 Jun  5 16:58 wrapper_checkpoint.txt
[2025-06-05 16:58:26] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 16:58 boinc_mmap_file
[2025-06-05 16:58:26] -rw-------. 1 boincer umatlas      4611 Jun  5 16:58 pilotlog.txt
[2025-06-05 16:58:26] -rw-------. 1 boincer umatlas    797615 Jun  5 16:58 log.44871837._084213.job.log.1
[2025-06-05 16:58:26] -rw-------. 1 boincer umatlas       357 Jun  5 16:58 output.list
[2025-06-05 16:58:26] -rw-r--r--. 1 boincer umatlas       620 Jun  5 16:58 runtime_log
[2025-06-05 16:58:26] -rw-------. 1 boincer umatlas   1177600 Jun  5 16:58 result.tar.gz
[2025-06-05 16:58:26] -rw-r--r--. 1 boincer umatlas      8664 Jun  5 16:58 runtime_log.err
[2025-06-05 16:58:26] -rw-------. 1 boincer umatlas       654 Jun  5 16:58 iikNDm04Ue7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJ8bKDmBXMTRm.diag
[2025-06-05 16:58:26] -rw-r--r--. 1 boincer umatlas     21234 Jun  5 16:58 stderr.txt
[2025-06-05 16:58:27] HITS file was successfully produced:
[2025-06-05 16:58:27] -rw-------. 1 boincer umatlas 202573696 Jun  5 16:57 shared/HITS.pool.root.1
[2025-06-05 16:58:27]  *** Contents of shared directory: ***
[2025-06-05 16:58:27] total 420196
[2025-06-05 16:58:27] -rw-r--r--. 2 boincer umatlas 225991758 Jun  5 14:29 ATLAS.root_0
[2025-06-05 16:58:27] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 14:29 start_atlas.sh
[2025-06-05 16:58:27] -rw-r--r--. 2 boincer umatlas    508876 Jun  5 14:29 input.tar.gz
[2025-06-05 16:58:27] -rw-------. 1 boincer umatlas 202573696 Jun  5 16:57 HITS.pool.root.1
[2025-06-05 16:58:27] -rw-------. 1 boincer umatlas   1177600 Jun  5 16:58 result.tar.gz
16:58:28 (2377295): run_atlas exited; CPU time 55165.260422
16:58:28 (2377295): called boinc_finish(0)

</stderr_txt>
]]>

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