Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:42:17 (2048652): wrapper (7.7.26015): starting
14:42:17 (2048652): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 14:42:17] Arguments: --nthreads 12
[2025-06-05 14:42:17] Threads: 12
[2025-06-05 14:42:17] Checking for CVMFS
[2025-06-05 14:42:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 14:42:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 14:42:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 14:42:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 14:42:18] 2.12.6.0 5554 2635 157756 146829 0 435 30809328 32935936 10958 16776704 0 8407369 99.635 6073593 33358 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 14:42:18] CVMFS is ok
[2025-06-05 14:42:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 14:42:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 14:42:18] Further information can be found at the LHC@home message board.
[2025-06-05 14:42:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 14:42:18] Checking for apptainer binary...
[2025-06-05 14:42:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 14:42:18] Running /usr/bin/apptainer --version
[2025-06-05 14:42:18] apptainer version 1.4.1-1.el9
[2025-06-05 14:42:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 14:42:18] c6-1-26-2.aglt2.org
[2025-06-05 14:42:18] apptainer works
[2025-06-05 14:42:18] Set ATHENA_PROC_NUMBER=12
[2025-06-05 14:42:18] Set ATHENA_CORE_NUMBER=12
[2025-06-05 14:42:18] Starting ATLAS job with PandaID=6668440950
[2025-06-05 14:42:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 17:16:38]  *** The last 200 lines of the pilot log: ***
[2025-06-05 17:16:38] 2025-06-05 21:16:16,035 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668440950/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 17:16:38] 2025-06-05 21:16:16,036 | INFO     | extracted standard info from prmon json
[2025-06-05 17:16:38] 2025-06-05 21:16:16,036 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 17:16:38] 2025-06-05 21:16:16,036 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 17:16:38] 2025-06-05 21:16:16,040 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 17:16:38] 2025-06-05 21:16:16,040 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 17:16:38] 2025-06-05 21:16:16,045 | INFO     | fitting pss+swap vs Time
[2025-06-05 17:16:38] 2025-06-05 21:16:16,046 | INFO     | sum of square deviations: 1067546884.5430487
[2025-06-05 17:16:38] 2025-06-05 21:16:16,046 | INFO     | sum of deviations: -14945410556.668882
[2025-06-05 17:16:38] 2025-06-05 21:16:16,046 | INFO     | mean x: 1749153550.4105961
[2025-06-05 17:16:38] 2025-06-05 21:16:16,047 | INFO     | mean y: 2391285.5430463576
[2025-06-05 17:16:38] 2025-06-05 21:16:16,047 | INFO     | -- intersect: 24490138208.930943
[2025-06-05 17:16:38] 2025-06-05 21:16:16,047 | INFO     | intersect: 24490138208.930943
[2025-06-05 17:16:38] 2025-06-05 21:16:16,047 | INFO     | chi2: 2.7241582621109055
[2025-06-05 17:16:38] 2025-06-05 21:16:16,047 | INFO     | sum of square deviations: 964969069.8424653
[2025-06-05 17:16:38] 2025-06-05 21:16:16,057 | INFO     | sum of deviations: -4049422920.1712255
[2025-06-05 17:16:38] 2025-06-05 21:16:16,057 | INFO     | mean x: 1749153397.910959
[2025-06-05 17:16:38] 2025-06-05 21:16:16,058 | INFO     | mean y: 2407068.294520548
[2025-06-05 17:16:38] 2025-06-05 21:16:16,058 | INFO     | -- intersect: 7342602813.171972
[2025-06-05 17:16:38] 2025-06-05 21:16:16,058 | INFO     | intersect: 7342602813.171972
[2025-06-05 17:16:38] 2025-06-05 21:16:16,058 | INFO     | chi2: 1.8480530691572379
[2025-06-05 17:16:38] 2025-06-05 21:16:16,058 | INFO     | current chi2=1.8480530691572379 (change=32.16058351451241 %)
[2025-06-05 17:16:38] 2025-06-05 21:16:16,059 | INFO     | sum of square deviations: 869173173.9574465
[2025-06-05 17:16:38] 2025-06-05 21:16:16,059 | INFO     | sum of deviations: -4246420248.8085256
[2025-06-05 17:16:38] 2025-06-05 21:16:16,059 | INFO     | mean x: 1749153245.4042554
[2025-06-05 17:16:38] 2025-06-05 21:16:16,059 | INFO     | mean y: 2406768.3475177307
[2025-06-05 17:16:38] 2025-06-05 21:16:16,060 | INFO     | -- intersect: 8548045292.52662
[2025-06-05 17:16:38] 2025-06-05 21:16:16,060 | INFO     | intersect: 8548045292.52662
[2025-06-05 17:16:38] 2025-06-05 21:16:16,060 | INFO     | chi2: 1.8442830888792032
[2025-06-05 17:16:38] 2025-06-05 21:16:16,060 | INFO     | current chi2=1.8442830888792032 (change=0.20399740358938231 %)
[2025-06-05 17:16:38] 2025-06-05 21:16:16,060 | INFO     | right removable region: 140
[2025-06-05 17:16:38] 2025-06-05 21:16:16,060 | INFO     | sum of square deviations: 964949306.1712364
[2025-06-05 17:16:38] 2025-06-05 21:16:16,061 | INFO     | sum of deviations: -37517418992.05479
[2025-06-05 17:16:38] 2025-06-05 21:16:16,061 | INFO     | mean x: 1749153702.9246576
[2025-06-05 17:16:38] 2025-06-05 21:16:16,061 | INFO     | mean y: 2424396.904109589
[2025-06-05 17:16:38] 2025-06-05 21:16:16,061 | INFO     | -- intersect: 68009864719.87083
[2025-06-05 17:16:38] 2025-06-05 21:16:16,061 | INFO     | intersect: 68009864719.87083
[2025-06-05 17:16:38] 2025-06-05 21:16:16,062 | INFO     | chi2: 1.2512764956490883
[2025-06-05 17:16:38] 2025-06-05 21:16:16,062 | INFO     | current chi2=1.2512764956490883 (change=54.06740815860329 %)
[2025-06-05 17:16:38] 2025-06-05 21:16:16,062 | INFO     | sum of square deviations: 869151336.6099266
[2025-06-05 17:16:38] 2025-06-05 21:16:16,063 | INFO     | sum of deviations: -38015680896.18442
[2025-06-05 17:16:38] 2025-06-05 21:16:16,063 | INFO     | mean x: 1749153855.432624
[2025-06-05 17:16:38] 2025-06-05 21:16:16,063 | INFO     | mean y: 2425036.8226950355
[2025-06-05 17:16:38] 2025-06-05 21:16:16,063 | INFO     | -- intersect: 76508405072.26534
[2025-06-05 17:16:38] 2025-06-05 21:16:16,063 | INFO     | intersect: 76508405072.26534
[2025-06-05 17:16:38] 2025-06-05 21:16:16,063 | INFO     | chi2: 1.1807701720338
[2025-06-05 17:16:38] 2025-06-05 21:16:16,063 | INFO     | current chi2=1.1807701720338 (change=5.6347517003996614 %)
[2025-06-05 17:16:38] 2025-06-05 21:16:16,072 | INFO     | left removable region: 20
[2025-06-05 17:16:38] 2025-06-05 21:16:16,073 | INFO     | sum of square deviations: 535738568.5916666
[2025-06-05 17:16:38] 2025-06-05 21:16:16,073 | INFO     | sum of deviations: -16030053550.333338
[2025-06-05 17:16:38] 2025-06-05 21:16:16,073 | INFO     | mean x: 1749153824.9416666
[2025-06-05 17:16:38] 2025-06-05 21:16:16,074 | INFO     | mean y: 2422960.6666666665
[2025-06-05 17:16:38] 2025-06-05 21:16:16,074 | INFO     | -- intersect: 52339572319.34258
[2025-06-05 17:16:38] 2025-06-05 21:16:16,074 | INFO     | intersect: 52339572319.34258
[2025-06-05 17:16:38] 2025-06-05 21:16:16,074 | INFO     | chi2: 0.21364217757447626
[2025-06-05 17:16:38] 2025-06-05 21:16:16,074 | INFO     | -- intersect: 52339572319.34258
[2025-06-05 17:16:38] 2025-06-05 21:16:16,074 | INFO     | current memory leak: -29.92 B/s (using 120 data points, chi2=0.21)
[2025-06-05 17:16:38] 2025-06-05 21:16:16,075 | INFO     | ..............................
[2025-06-05 17:16:38] 2025-06-05 21:16:16,075 | INFO     | . Timing measurements:
[2025-06-05 17:16:38] 2025-06-05 21:16:16,075 | INFO     | . get job = 0 s
[2025-06-05 17:16:38] 2025-06-05 21:16:16,075 | INFO     | . initial setup = 3 s
[2025-06-05 17:16:38] 2025-06-05 21:16:16,075 | INFO     | . payload setup = 6 s
[2025-06-05 17:16:38] 2025-06-05 21:16:16,075 | INFO     | . stage-in = 0 s
[2025-06-05 17:16:38] 2025-06-05 21:16:16,075 | INFO     | . payload execution = 9183 s
[2025-06-05 17:16:38] 2025-06-05 21:16:16,075 | INFO     | . stage-out = 1 s
[2025-06-05 17:16:38] 2025-06-05 21:16:16,076 | INFO     | . log creation = 0 s
[2025-06-05 17:16:38] 2025-06-05 21:16:16,076 | INFO     | ..............................
[2025-06-05 17:16:38] 2025-06-05 21:16:16,156 | INFO     | 
[2025-06-05 17:16:38] 2025-06-05 21:16:16,157 | INFO     | job summary report
[2025-06-05 17:16:38] 2025-06-05 21:16:16,157 | INFO     | --------------------------------------------------
[2025-06-05 17:16:38] 2025-06-05 21:16:16,157 | INFO     | PanDA job id: 6668440950
[2025-06-05 17:16:38] 2025-06-05 21:16:16,157 | INFO     | task id: 44871837
[2025-06-05 17:16:38] 2025-06-05 21:16:16,157 | INFO     | errors: (none)
[2025-06-05 17:16:38] 2025-06-05 21:16:16,157 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 17:16:38] 2025-06-05 21:16:16,157 | INFO     | pilot state: finished 
[2025-06-05 17:16:38] 2025-06-05 21:16:16,157 | INFO     | transexitcode: 0
[2025-06-05 17:16:38] 2025-06-05 21:16:16,157 | INFO     | exeerrorcode: 0
[2025-06-05 17:16:38] 2025-06-05 21:16:16,157 | INFO     | exeerrordiag: 
[2025-06-05 17:16:38] 2025-06-05 21:16:16,157 | INFO     | exitcode: 0
[2025-06-05 17:16:38] 2025-06-05 21:16:16,157 | INFO     | exitmsg: OK
[2025-06-05 17:16:38] 2025-06-05 21:16:16,157 | INFO     | cpuconsumptiontime: 48539 s
[2025-06-05 17:16:38] 2025-06-05 21:16:16,157 | INFO     | nevents: 400
[2025-06-05 17:16:38] 2025-06-05 21:16:16,158 | INFO     | neventsw: 0
[2025-06-05 17:16:38] 2025-06-05 21:16:16,158 | INFO     | pid: 2058719
[2025-06-05 17:16:38] 2025-06-05 21:16:16,158 | INFO     | pgrp: 2058719
[2025-06-05 17:16:38] 2025-06-05 21:16:16,158 | INFO     | corecount: 12
[2025-06-05 17:16:38] 2025-06-05 21:16:16,158 | INFO     | event service: False
[2025-06-05 17:16:38] 2025-06-05 21:16:16,158 | INFO     | sizes: {0: 2397221, 1: 2397420, 5: 2397626, 11: 2397682, 9194: 2425830, 9196: 2434799, 9198: 2434983, 9212: 2435153}
[2025-06-05 17:16:38] 2025-06-05 21:16:16,158 | INFO     | --------------------------------------------------
[2025-06-05 17:16:38] 2025-06-05 21:16:16,158 | INFO     | 
[2025-06-05 17:16:38] 2025-06-05 21:16:16,158 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 17:16:38] 2025-06-05 21:16:16,181 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 17:16:38] 2025-06-05 21:16:16,181 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 17:16:38] 2025-06-05 21:16:16,181 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 17:16:38] 2025-06-05 21:16:16,182 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 17:16:38] 2025-06-05 21:16:16,182 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 17:16:38] 2025-06-05 21:16:16,182 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 17:16:38] 2025-06-05 21:16:16,182 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 17:16:38] 2025-06-05 21:16:16,182 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 17:16:38] 2025-06-05 21:16:16,182 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 17:16:38] 2025-06-05 21:16:16,182 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 17:16:38] 2025-06-05 21:16:16,182 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 17:16:38] 2025-06-05 21:16:16,182 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 17:16:38] 2025-06-05 21:16:16,182 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 17:16:38] 2025-06-05 21:16:16,182 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 17:16:38] 2025-06-05 21:16:16,182 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 17:16:38] 2025-06-05 21:16:16,182 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 17:16:38] 2025-06-05 21:16:16,182 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 17:16:38] 2025-06-05 21:16:16,182 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 17:16:38] 2025-06-05 21:16:16,182 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 17:16:38] 2025-06-05 21:16:16,183 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 17:16:38] 2025-06-05 21:16:16,183 | INFO     | job 6668440950 has completed (purged errors)
[2025-06-05 17:16:38] 2025-06-05 21:16:16,183 | INFO     | overall cleanup function is called
[2025-06-05 17:16:38] 2025-06-05 21:16:17,192 | INFO     | --- collectZombieJob: --- 10, [2058719]
[2025-06-05 17:16:38] 2025-06-05 21:16:17,192 | INFO     | zombie collector waiting for pid 2058719
[2025-06-05 17:16:38] 2025-06-05 21:16:17,192 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 17:16:38] 2025-06-05 21:16:17,192 | INFO     | collected zombie processes
[2025-06-05 17:16:38] 2025-06-05 21:16:17,192 | INFO     | will attempt to kill all subprocesses of pid=2058719
[2025-06-05 17:16:38] 2025-06-05 21:16:17,494 | INFO     | process IDs to be killed: [2058719] (in reverse order)
[2025-06-05 17:16:38] 2025-06-05 21:16:17,681 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 17:16:38] 2025-06-05 21:16:17,682 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 17:16:38] 2025-06-05 21:16:17,692 | INFO     | did not find any defunct processes belonging to 2058719
[2025-06-05 17:16:38] 2025-06-05 21:16:17,703 | INFO     | did not find any defunct processes belonging to 2058719
[2025-06-05 17:16:38] 2025-06-05 21:16:17,704 | INFO     | ready for new job
[2025-06-05 17:16:38] 2025-06-05 21:16:17,704 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 17:16:38] 2025-06-05 21:16:17,707 | INFO     | **************************************
[2025-06-05 17:16:38] 2025-06-05 21:16:17,707 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 17:16:38] 2025-06-05 21:16:17,707 | INFO     | **************************************
[2025-06-05 17:16:38] 2025-06-05 21:16:17,707 | INFO     | 
[2025-06-05 17:16:38] 2025-06-05 21:16:17,723 | INFO     | architecture information:
[2025-06-05 17:16:38] 2025-06-05 21:16:17,723 | INFO     | executing command: cat /etc/os-release
[2025-06-05 17:16:38] 2025-06-05 21:16:17,741 | INFO     | cat /etc/os-release:
[2025-06-05 17:16:38] NAME="CentOS Linux"
[2025-06-05 17:16:38] VERSION="7 (Core)"
[2025-06-05 17:16:38] ID="centos"
[2025-06-05 17:16:38] ID_LIKE="rhel fedora"
[2025-06-05 17:16:38] VERSION_ID="7"
[2025-06-05 17:16:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 17:16:38] ANSI_COLOR="0;31"
[2025-06-05 17:16:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 17:16:38] HOME_URL="https://www.centos.org/"
[2025-06-05 17:16:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 17:16:38] 
[2025-06-05 17:16:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 17:16:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 17:16:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 17:16:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 17:16:38] 
[2025-06-05 17:16:38] 2025-06-05 21:16:17,742 | INFO     | **************************************
[2025-06-05 17:16:38] 2025-06-05 21:16:18,245 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 17:16:38] 2025-06-05 21:16:18,296 | INFO     | sufficient remaining disk space (76255592448 B)
[2025-06-05 17:16:38] 2025-06-05 21:16:18,296 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 17:16:38] 2025-06-05 21:16:18,296 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 17:16:38] 2025-06-05 21:16:18,296 | INFO     | update_server=False
[2025-06-05 17:16:38] 2025-06-05 21:16:18,297 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 17:16:38] 2025-06-05 21:16:18,298 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:16:38] 2025-06-05 21:16:18,299 | INFO     | aborting loop
[2025-06-05 17:16:38] 2025-06-05 21:16:18,302 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 17:16:38] 2025-06-05 21:16:19,218 | INFO     | all job control threads have been joined
[2025-06-05 17:16:38] 2025-06-05 21:16:19,225 | INFO     | all data control threads have been joined
[2025-06-05 17:16:38] 2025-06-05 21:16:19,272 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 17:16:38] 2025-06-05 21:16:19,272 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 17:16:38] 2025-06-05 21:16:19,272 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 17:16:38] 2025-06-05 21:16:19,305 | INFO     | [job] job monitor thread has finished
[2025-06-05 17:16:38] 2025-06-05 21:16:19,307 | INFO     | [job] retrieve thread has finished
[2025-06-05 17:16:38] 2025-06-05 21:16:19,313 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 17:16:38] 2025-06-05 21:16:19,336 | INFO     | [payload] failed_post thread has finished
[2025-06-05 17:16:38] 2025-06-05 21:16:19,363 | INFO     | [data] copytool_in thread has finished
[2025-06-05 17:16:38] 2025-06-05 21:16:19,587 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 17:16:38] 2025-06-05 21:16:19,607 | INFO     | all payload control threads have been joined
[2025-06-05 17:16:38] 2025-06-05 21:16:19,637 | INFO     | [payload] validate_post thread has finished
[2025-06-05 17:16:38] 2025-06-05 21:16:20,225 | INFO     | [job] control thread has finished
[2025-06-05 17:16:38] 2025-06-05 21:16:20,233 | INFO     | [data] control thread has finished
[2025-06-05 17:16:38] 2025-06-05 21:16:20,295 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 17:16:38] 2025-06-05 21:16:20,309 | INFO     | [data] copytool_out thread has finished
[2025-06-05 17:16:38] 2025-06-05 21:16:20,616 | INFO     | [payload] control thread has finished
[2025-06-05 17:16:38] 2025-06-05 21:16:20,737 | INFO     | [job] validate thread has finished
[2025-06-05 17:16:38] 2025-06-05 21:16:21,170 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:16:38] 2025-06-05 21:16:21,308 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 17:16:38] 2025-06-05 21:16:22,176 | INFO     | [job] queue monitor thread has finished
[2025-06-05 17:16:38] 2025-06-05 21:16:25,316 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 17:16:38] 2025-06-05 21:16:29,011 | INFO     | job.realtimelogging is not enabled
[2025-06-05 17:16:38] 2025-06-05 21:16:30,017 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 17:16:38] 2025-06-05 21:16:32,000 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140691393398592)>', '<ExcThread(monitor, started 140690889623296)>']
[2025-06-05 17:16:38] 2025-06-05 21:16:32,346 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 17:16:38] 2025-06-05 21:16:32,347 | INFO     | [monitor] control thread has ended
[2025-06-05 17:16:38] 2025-06-05 21:16:37,026 | INFO     | all workflow threads have been joined
[2025-06-05 17:16:38] 2025-06-05 21:16:37,026 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 17:16:38] 2025-06-05 21:16:37,026 | INFO     | traces error code: 0
[2025-06-05 17:16:38] 2025-06-05 21:16:37,027 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 17:16:38] 2025-06-05 21:16:37,302 [wrapper] ==== pilot stdout END ====
[2025-06-05 17:16:38] 2025-06-05 21:16:37,345 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 17:16:38] 2025-06-05 21:16:37,369 [wrapper] pilotpid: 2052220
[2025-06-05 17:16:38] 2025-06-05 21:16:37,375 [wrapper] Pilot exit status: 0
[2025-06-05 17:16:38] 2025-06-05 21:16:37,556 [wrapper] pandaids: 6668440950
[2025-06-05 17:16:38] 2025-06-05 21:16:37,890 [wrapper] cleanup supervisor_pilot 2288495 2052221
[2025-06-05 17:16:38] 2025-06-05 21:16:37,925 [wrapper] Test setup, not cleaning
[2025-06-05 17:16:38] 2025-06-05 21:16:37,948 [wrapper] apfmon messages muted
[2025-06-05 17:16:38] 2025-06-05 21:16:37,956 [wrapper] ==== wrapper stdout END ====
[2025-06-05 17:16:38] 2025-06-05 21:16:37,959 [wrapper] ==== wrapper stderr END ====
[2025-06-05 17:16:38]  *** Error codes and diagnostics ***
[2025-06-05 17:16:38]     "exeErrorCode": 0,
[2025-06-05 17:16:38]     "exeErrorDiag": "",
[2025-06-05 17:16:38]     "pilotErrorCode": 0,
[2025-06-05 17:16:38]     "pilotErrorDiag": "",
[2025-06-05 17:16:38]  *** Listing of results directory ***
[2025-06-05 17:16:38] total 415400
[2025-06-05 17:16:38] -rw-r--r--. 1 boincer umatlas    495897 May 28 07:45 pilot3.tar.gz
[2025-06-05 17:16:38] -rw-r--r--. 1 boincer umatlas      5111 May 28 08:31 queuedata.json
[2025-06-05 17:16:38] -rwx------. 1 boincer umatlas     37140 May 28 08:33 runpilot2-wrapper.sh
[2025-06-05 17:16:38] -rw-r--r--. 1 boincer umatlas       100 Jun  5 14:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 17:16:38] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 14:42 run_atlas
[2025-06-05 17:16:38] -rw-r--r--. 1 boincer umatlas       105 Jun  5 14:42 job.xml
[2025-06-05 17:16:38] -rw-r--r--. 2 boincer umatlas 225093079 Jun  5 14:42 EVNT.44871834._003288.pool.root.1
[2025-06-05 17:16:38] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 14:42 start_atlas.sh
[2025-06-05 17:16:38] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 14:42 shared
[2025-06-05 17:16:38] -rw-r--r--. 2 boincer umatlas    508881 Jun  5 14:42 input.tar.gz
[2025-06-05 17:16:38] -rw-r--r--. 1 boincer umatlas         0 Jun  5 14:42 boinc_lockfile
[2025-06-05 17:16:38] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 14:42 pandaJob.out
[2025-06-05 17:16:38] -rw-------. 1 boincer umatlas    987543 Jun  5 14:42 agis_schedconf.cvmfs.json
[2025-06-05 17:16:38] -rw-------. 1 boincer umatlas   1598969 Jun  5 14:42 agis_ddmendpoints.agis.ALL.json
[2025-06-05 17:16:38] drwx------. 4 boincer umatlas      4096 Jun  5 14:42 pilot3
[2025-06-05 17:16:38] -rw-r--r--. 1 boincer umatlas      6842 Jun  5 17:12 init_data.xml
[2025-06-05 17:16:38] -rw-------. 1 boincer umatlas 194024372 Jun  5 17:15 HITS.44871837._084279.pool.root.1
[2025-06-05 17:16:38] -rw-------. 1 boincer umatlas        95 Jun  5 17:15 pilot_heartbeat.json
[2025-06-05 17:16:38] -rw-r--r--. 1 boincer umatlas       530 Jun  5 17:15 boinc_task_state.xml
[2025-06-05 17:16:38] -rw-------. 1 boincer umatlas      1036 Jun  5 17:15 memory_monitor_summary.json
[2025-06-05 17:16:38] -rw-------. 1 boincer umatlas    407722 Jun  5 17:15 log.44871837._084279.job.log.tgz.1
[2025-06-05 17:16:38] -rw-------. 1 boincer umatlas      7716 Jun  5 17:16 heartbeat.json
[2025-06-05 17:16:38] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 17:16 boinc_mmap_file
[2025-06-05 17:16:38] -rw-r--r--. 1 boincer umatlas        27 Jun  5 17:16 wrapper_checkpoint.txt
[2025-06-05 17:16:38] -rw-------. 1 boincer umatlas      4425 Jun  5 17:16 pilotlog.txt
[2025-06-05 17:16:38] -rw-------. 1 boincer umatlas    798930 Jun  5 17:16 log.44871837._084279.job.log.1
[2025-06-05 17:16:38] -rw-------. 1 boincer umatlas       357 Jun  5 17:16 output.list
[2025-06-05 17:16:38] -rw-r--r--. 1 boincer umatlas       620 Jun  5 17:16 runtime_log
[2025-06-05 17:16:38] -rw-------. 1 boincer umatlas   1228800 Jun  5 17:16 result.tar.gz
[2025-06-05 17:16:38] -rw-r--r--. 1 boincer umatlas      8666 Jun  5 17:16 runtime_log.err
[2025-06-05 17:16:38] -rw-------. 1 boincer umatlas       654 Jun  5 17:16 ey0KDmU9Ue7n9Rq4apOajLDm4fhM0noT9bVof3QYDmJUTKDmftow8m.diag
[2025-06-05 17:16:38] -rw-r--r--. 1 boincer umatlas     20887 Jun  5 17:16 stderr.txt
[2025-06-05 17:16:38] HITS file was successfully produced:
[2025-06-05 17:16:38] -rw-------. 1 boincer umatlas 194024372 Jun  5 17:15 shared/HITS.pool.root.1
[2025-06-05 17:16:38]  *** Contents of shared directory: ***
[2025-06-05 17:16:38] total 411020
[2025-06-05 17:16:38] -rw-r--r--. 2 boincer umatlas 225093079 Jun  5 14:42 ATLAS.root_0
[2025-06-05 17:16:38] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 14:42 start_atlas.sh
[2025-06-05 17:16:38] -rw-r--r--. 2 boincer umatlas    508881 Jun  5 14:42 input.tar.gz
[2025-06-05 17:16:38] -rw-------. 1 boincer umatlas 194024372 Jun  5 17:15 HITS.pool.root.1
[2025-06-05 17:16:38] -rw-------. 1 boincer umatlas   1228800 Jun  5 17:16 result.tar.gz
17:16:39 (2048652): run_atlas exited; CPU time 48676.262900
17:16:39 (2048652): called boinc_finish(0)

</stderr_txt>
]]>

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