Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:59:09 (16842): wrapper (7.7.26015): starting
13:59:09 (16842): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 13:59:09] Arguments: --nthreads 8
[2025-06-05 13:59:09] Threads: 8
[2025-06-05 13:59:09] Checking for CVMFS
[2025-06-05 13:59:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 13:59:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 13:59:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 13:59:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 13:59:09] 2.11.2.0 2791 8612 75748 146827 0 56 14148540 20275201 1 130560 0 2996548 99.985 1424290 45637 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 13:59:09] CVMFS is ok
[2025-06-05 13:59:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 13:59:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 13:59:09] Further information can be found at the LHC@home message board.
[2025-06-05 13:59:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 13:59:09] Checking for apptainer binary...
[2025-06-05 13:59:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 13:59:09] Running /usr/bin/apptainer --version
[2025-06-05 13:59:09] apptainer version 1.3.2-1.el7
[2025-06-05 13:59:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:59:11] c-204-3.aglt2.org
[2025-06-05 13:59:11] apptainer works
[2025-06-05 13:59:11] Set ATHENA_PROC_NUMBER=8
[2025-06-05 13:59:11] Set ATHENA_CORE_NUMBER=8
[2025-06-05 13:59:11] Starting ATLAS job with PandaID=6669090461
[2025-06-05 13:59:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
15:29:25 (28220): wrapper (7.7.26015): starting
15:29:25 (28220): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 15:29:25] Arguments: --nthreads 8
[2025-06-05 15:29:25] Threads: 8
[2025-06-05 15:29:25] This job has been restarted, cleaning up previous attempt
[2025-06-05 15:29:25] Checking for CVMFS
[2025-06-05 15:29:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 15:29:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 15:29:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 15:29:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 15:29:25] 2.11.2.0 2791 8702 77524 146830 2 8 14157448 20275201 1 130560 0 3070408 99.985 1428178 45601 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 15:29:25] CVMFS is ok
[2025-06-05 15:29:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 15:29:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 15:29:25] Further information can be found at the LHC@home message board.
[2025-06-05 15:29:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 15:29:25] Checking for apptainer binary...
[2025-06-05 15:29:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 15:29:25] Running /usr/bin/apptainer --version
[2025-06-05 15:29:25] apptainer version 1.3.2-1.el7
[2025-06-05 15:29:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 15:29:27] c-204-3.aglt2.org
[2025-06-05 15:29:27] apptainer works
[2025-06-05 15:29:27] Set ATHENA_PROC_NUMBER=8
[2025-06-05 15:29:27] Set ATHENA_CORE_NUMBER=8
[2025-06-05 15:29:27] Starting ATLAS job with PandaID=6669090461
[2025-06-05 15:29:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 18:19:27]  *** The last 200 lines of the pilot log: ***
[2025-06-05 18:19:27] 2025-06-05 22:19:08,929 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 18:19:27] 2025-06-05 22:19:09,645 | INFO     | monitor loop #746: job 0:6669090461 is in state 'finished'
[2025-06-05 18:19:27] 2025-06-05 22:19:09,653 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 18:19:27] 2025-06-05 22:19:12,155 | INFO     | monitor loop #747: job 0:6669090461 is in state 'finished'
[2025-06-05 18:19:27] 2025-06-05 22:19:12,155 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 18:19:27] 2025-06-05 22:19:14,658 | INFO     | monitor loop #748: job 0:6669090461 is in state 'finished'
[2025-06-05 18:19:27] 2025-06-05 22:19:14,658 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 18:19:27] 2025-06-05 22:19:14,697 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 18:19:27] 2025-06-05 22:19:14,697 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669090461/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 18:19:27] 2025-06-05 22:19:14,698 | INFO     | extracted standard info from prmon json
[2025-06-05 18:19:27] 2025-06-05 22:19:14,699 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 18:19:27] 2025-06-05 22:19:14,699 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 18:19:27] 2025-06-05 22:19:14,699 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 18:19:27] 2025-06-05 22:19:14,700 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 18:19:27] 2025-06-05 22:19:14,704 | INFO     | fitting pss+swap vs Time
[2025-06-05 18:19:27] 2025-06-05 22:19:14,705 | INFO     | sum of square deviations: 1418361477.5
[2025-06-05 18:19:27] 2025-06-05 22:19:14,706 | INFO     | sum of deviations: -7620961403.5
[2025-06-05 18:19:27] 2025-06-05 22:19:14,706 | INFO     | mean x: 1749156848.5
[2025-06-05 18:19:27] 2025-06-05 22:19:14,706 | INFO     | mean y: 2544440.0542168673
[2025-06-05 18:19:27] 2025-06-05 22:19:14,706 | INFO     | -- intersect: 9400893903.536592
[2025-06-05 18:19:27] 2025-06-05 22:19:14,706 | INFO     | intersect: 9400893903.536592
[2025-06-05 18:19:27] 2025-06-05 22:19:14,706 | INFO     | chi2: 1.723950628595826
[2025-06-05 18:19:27] 2025-06-05 22:19:14,707 | INFO     | sum of square deviations: 1294014960.0
[2025-06-05 18:19:27] 2025-06-05 22:19:14,708 | INFO     | sum of deviations: -7020704780.999989
[2025-06-05 18:19:27] 2025-06-05 22:19:14,708 | INFO     | mean x: 1749156696.0
[2025-06-05 18:19:27] 2025-06-05 22:19:14,708 | INFO     | mean y: 2545174.5776397516
[2025-06-05 18:19:27] 2025-06-05 22:19:14,708 | INFO     | -- intersect: 9492630805.678337
[2025-06-05 18:19:27] 2025-06-05 22:19:14,708 | INFO     | intersect: 9492630805.678337
[2025-06-05 18:19:27] 2025-06-05 22:19:14,708 | INFO     | chi2: 1.7237243307949117
[2025-06-05 18:19:27] 2025-06-05 22:19:14,708 | INFO     | current chi2=1.7237243307949117 (change=0.01312669847735326 %)
[2025-06-05 18:19:27] 2025-06-05 22:19:14,709 | INFO     | right removable region: 160
[2025-06-05 18:19:27] 2025-06-05 22:19:14,709 | INFO     | sum of square deviations: 1294014960.0
[2025-06-05 18:19:27] 2025-06-05 22:19:14,710 | INFO     | sum of deviations: -33666561422.999996
[2025-06-05 18:19:27] 2025-06-05 22:19:14,710 | INFO     | mean x: 1749157001.0
[2025-06-05 18:19:27] 2025-06-05 22:19:14,710 | INFO     | mean y: 2575947.347826087
[2025-06-05 18:19:27] 2025-06-05 22:19:14,710 | INFO     | -- intersect: 45510629125.216
[2025-06-05 18:19:27] 2025-06-05 22:19:14,710 | INFO     | intersect: 45510629125.216
[2025-06-05 18:19:27] 2025-06-05 22:19:14,711 | INFO     | chi2: 0.18490226938863394
[2025-06-05 18:19:27] 2025-06-05 22:19:14,711 | INFO     | current chi2=0.18490226938863394 (change=89.27450320667022 %)
[2025-06-05 18:19:27] 2025-06-05 22:19:14,711 | INFO     | sum of square deviations: 1177156955.0
[2025-06-05 18:19:27] 2025-06-05 22:19:14,712 | INFO     | sum of deviations: -33056121399.5
[2025-06-05 18:19:27] 2025-06-05 22:19:14,712 | INFO     | mean x: 1749157153.5
[2025-06-05 18:19:27] 2025-06-05 22:19:14,712 | INFO     | mean y: 2575076.0576923075
[2025-06-05 18:19:27] 2025-06-05 22:19:14,712 | INFO     | -- intersect: 49121217214.055214
[2025-06-05 18:19:27] 2025-06-05 22:19:14,712 | INFO     | intersect: 49121217214.055214
[2025-06-05 18:19:27] 2025-06-05 22:19:14,713 | INFO     | chi2: 0.16244062064873674
[2025-06-05 18:19:27] 2025-06-05 22:19:14,713 | INFO     | current chi2=0.16244062064873674 (change=12.147849138988411 %)
[2025-06-05 18:19:27] 2025-06-05 22:19:14,713 | INFO     | left removable region: 20
[2025-06-05 18:19:27] 2025-06-05 22:19:14,713 | INFO     | sum of square deviations: 850825255.0
[2025-06-05 18:19:27] 2025-06-05 22:19:14,714 | INFO     | sum of deviations: -22851539003.5
[2025-06-05 18:19:27] 2025-06-05 22:19:14,714 | INFO     | mean x: 1749157275.5
[2025-06-05 18:19:27] 2025-06-05 22:19:14,714 | INFO     | mean y: 2563665.5785714285
[2025-06-05 18:19:27] 2025-06-05 22:19:14,714 | INFO     | -- intersect: 46981582529.26292
[2025-06-05 18:19:27] 2025-06-05 22:19:14,714 | INFO     | intersect: 46981582529.26292
[2025-06-05 18:19:27] 2025-06-05 22:19:14,715 | INFO     | chi2: 0.14965956378929776
[2025-06-05 18:19:27] 2025-06-05 22:19:14,715 | INFO     | -- intersect: 46981582529.26292
[2025-06-05 18:19:27] 2025-06-05 22:19:14,715 | INFO     | current memory leak: -26.86 B/s (using 140 data points, chi2=0.15)
[2025-06-05 18:19:27] 2025-06-05 22:19:14,715 | INFO     | ..............................
[2025-06-05 18:19:27] 2025-06-05 22:19:14,716 | INFO     | . Timing measurements:
[2025-06-05 18:19:27] 2025-06-05 22:19:14,716 | INFO     | . get job = 0 s
[2025-06-05 18:19:27] 2025-06-05 22:19:14,716 | INFO     | . initial setup = 1 s
[2025-06-05 18:19:27] 2025-06-05 22:19:14,716 | INFO     | . payload setup = 12 s
[2025-06-05 18:19:27] 2025-06-05 22:19:14,716 | INFO     | . stage-in = 0 s
[2025-06-05 18:19:27] 2025-06-05 22:19:14,716 | INFO     | . payload execution = 10125 s
[2025-06-05 18:19:27] 2025-06-05 22:19:14,716 | INFO     | . stage-out = 2 s
[2025-06-05 18:19:27] 2025-06-05 22:19:14,716 | INFO     | . log creation = 0 s
[2025-06-05 18:19:27] 2025-06-05 22:19:14,716 | INFO     | ..............................
[2025-06-05 18:19:27] 2025-06-05 22:19:14,811 | INFO     | 
[2025-06-05 18:19:27] 2025-06-05 22:19:14,811 | INFO     | job summary report
[2025-06-05 18:19:27] 2025-06-05 22:19:14,812 | INFO     | --------------------------------------------------
[2025-06-05 18:19:27] 2025-06-05 22:19:14,812 | INFO     | PanDA job id: 6669090461
[2025-06-05 18:19:27] 2025-06-05 22:19:14,812 | INFO     | task id: 44871837
[2025-06-05 18:19:27] 2025-06-05 22:19:14,812 | INFO     | errors: (none)
[2025-06-05 18:19:27] 2025-06-05 22:19:14,812 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 18:19:27] 2025-06-05 22:19:14,812 | INFO     | pilot state: finished 
[2025-06-05 18:19:27] 2025-06-05 22:19:14,813 | INFO     | transexitcode: 0
[2025-06-05 18:19:27] 2025-06-05 22:19:14,813 | INFO     | exeerrorcode: 0
[2025-06-05 18:19:27] 2025-06-05 22:19:14,813 | INFO     | exeerrordiag: 
[2025-06-05 18:19:27] 2025-06-05 22:19:14,813 | INFO     | exitcode: 0
[2025-06-05 18:19:27] 2025-06-05 22:19:14,813 | INFO     | exitmsg: OK
[2025-06-05 18:19:27] 2025-06-05 22:19:14,813 | INFO     | cpuconsumptiontime: 74497 s
[2025-06-05 18:19:27] 2025-06-05 22:19:14,813 | INFO     | nevents: 400
[2025-06-05 18:19:27] 2025-06-05 22:19:14,814 | INFO     | neventsw: 0
[2025-06-05 18:19:27] 2025-06-05 22:19:14,814 | INFO     | pid: 6307
[2025-06-05 18:19:27] 2025-06-05 22:19:14,814 | INFO     | pgrp: 6307
[2025-06-05 18:19:27] 2025-06-05 22:19:14,814 | INFO     | corecount: 8
[2025-06-05 18:19:27] 2025-06-05 22:19:14,814 | INFO     | event service: False
[2025-06-05 18:19:27] 2025-06-05 22:19:14,814 | INFO     | sizes: {0: 2397221, 1: 2397420, 7: 2397626, 11: 2397654, 10141: 2426117, 10144: 2435058, 10147: 2435242, 10156: 2435412}
[2025-06-05 18:19:27] 2025-06-05 22:19:14,814 | INFO     | --------------------------------------------------
[2025-06-05 18:19:27] 2025-06-05 22:19:14,814 | INFO     | 
[2025-06-05 18:19:27] 2025-06-05 22:19:14,815 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 18:19:27] 2025-06-05 22:19:14,841 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 18:19:27] 2025-06-05 22:19:14,842 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 18:19:27] 2025-06-05 22:19:14,842 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 18:19:27] 2025-06-05 22:19:14,842 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 18:19:27] 2025-06-05 22:19:14,842 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 18:19:27] 2025-06-05 22:19:14,843 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 18:19:27] 2025-06-05 22:19:14,843 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 18:19:27] 2025-06-05 22:19:14,843 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 18:19:27] 2025-06-05 22:19:14,843 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 18:19:27] 2025-06-05 22:19:14,843 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 18:19:27] 2025-06-05 22:19:14,843 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 18:19:27] 2025-06-05 22:19:14,844 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 18:19:27] 2025-06-05 22:19:14,844 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 18:19:27] 2025-06-05 22:19:14,844 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 18:19:27] 2025-06-05 22:19:14,844 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 18:19:27] 2025-06-05 22:19:14,844 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 18:19:27] 2025-06-05 22:19:14,845 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 18:19:27] 2025-06-05 22:19:14,845 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 18:19:27] 2025-06-05 22:19:14,845 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 18:19:27] 2025-06-05 22:19:14,845 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 18:19:27] 2025-06-05 22:19:14,845 | INFO     | job 6669090461 has completed (purged errors)
[2025-06-05 18:19:27] 2025-06-05 22:19:14,845 | INFO     | overall cleanup function is called
[2025-06-05 18:19:27] 2025-06-05 22:19:15,853 | INFO     | --- collectZombieJob: --- 10, [6307]
[2025-06-05 18:19:27] 2025-06-05 22:19:15,854 | INFO     | zombie collector waiting for pid 6307
[2025-06-05 18:19:27] 2025-06-05 22:19:15,854 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 18:19:27] 2025-06-05 22:19:15,854 | INFO     | collected zombie processes
[2025-06-05 18:19:27] 2025-06-05 22:19:15,854 | INFO     | will attempt to kill all subprocesses of pid=6307
[2025-06-05 18:19:27] 2025-06-05 22:19:15,947 | INFO     | process IDs to be killed: [6307] (in reverse order)
[2025-06-05 18:19:27] 2025-06-05 22:19:16,006 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 18:19:27] 2025-06-05 22:19:16,007 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 18:19:27] 2025-06-05 22:19:16,011 | INFO     | did not find any defunct processes belonging to 6307
[2025-06-05 18:19:27] 2025-06-05 22:19:16,015 | INFO     | did not find any defunct processes belonging to 6307
[2025-06-05 18:19:27] 2025-06-05 22:19:16,015 | INFO     | ready for new job
[2025-06-05 18:19:27] 2025-06-05 22:19:16,015 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 18:19:27] 2025-06-05 22:19:16,017 | INFO     | **************************************
[2025-06-05 18:19:27] 2025-06-05 22:19:16,017 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 18:19:27] 2025-06-05 22:19:16,017 | INFO     | **************************************
[2025-06-05 18:19:27] 2025-06-05 22:19:16,017 | INFO     | 
[2025-06-05 18:19:27] 2025-06-05 22:19:16,018 | INFO     | architecture information:
[2025-06-05 18:19:27] 2025-06-05 22:19:16,018 | INFO     | executing command: cat /etc/os-release
[2025-06-05 18:19:27] 2025-06-05 22:19:16,036 | INFO     | cat /etc/os-release:
[2025-06-05 18:19:27] NAME="CentOS Linux"
[2025-06-05 18:19:27] VERSION="7 (Core)"
[2025-06-05 18:19:27] ID="centos"
[2025-06-05 18:19:27] ID_LIKE="rhel fedora"
[2025-06-05 18:19:27] VERSION_ID="7"
[2025-06-05 18:19:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 18:19:27] ANSI_COLOR="0;31"
[2025-06-05 18:19:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 18:19:27] HOME_URL="https://www.centos.org/"
[2025-06-05 18:19:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 18:19:27] 
[2025-06-05 18:19:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 18:19:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 18:19:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 18:19:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 18:19:27] 
[2025-06-05 18:19:27] 2025-06-05 22:19:16,037 | INFO     | **************************************
[2025-06-05 18:19:27] 2025-06-05 22:19:16,539 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 18:19:27] 2025-06-05 22:19:16,560 | INFO     | sufficient remaining disk space (18602786816 B)
[2025-06-05 18:19:27] 2025-06-05 22:19:16,561 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 18:19:27] 2025-06-05 22:19:16,561 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 18:19:27] 2025-06-05 22:19:16,561 | INFO     | update_server=False
[2025-06-05 18:19:27] 2025-06-05 22:19:16,562 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 18:19:27] 2025-06-05 22:19:16,562 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:19:27] 2025-06-05 22:19:16,562 | INFO     | aborting loop
[2025-06-05 18:19:27] 2025-06-05 22:19:16,563 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:19:27] 2025-06-05 22:19:16,563 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 18:19:27] 2025-06-05 22:19:16,582 | INFO     | all data control threads have been joined
[2025-06-05 18:19:27] 2025-06-05 22:19:16,715 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 18:19:27] 2025-06-05 22:19:17,108 | INFO     | all payload control threads have been joined
[2025-06-05 18:19:27] 2025-06-05 22:19:17,407 | INFO     | all job control threads have been joined
[2025-06-05 18:19:27] 2025-06-05 22:19:17,545 | INFO     | PID=31816 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 18:19:27] 2025-06-05 22:19:17,546 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 18:19:27] 2025-06-05 22:19:17,546 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 18:19:27] 2025-06-05 22:19:17,546 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 18:19:27] 2025-06-05 22:19:17,564 | INFO     | [job] retrieve thread has finished
[2025-06-05 18:19:27] 2025-06-05 22:19:17,568 | INFO     | [job] job monitor thread has finished
[2025-06-05 18:19:27] 2025-06-05 22:19:17,569 | INFO     | [job] queue monitor thread has finished
[2025-06-05 18:19:27] 2025-06-05 22:19:17,582 | INFO     | [payload] failed_post thread has finished
[2025-06-05 18:19:27] 2025-06-05 22:19:17,583 | INFO     | [data] control thread has finished
[2025-06-05 18:19:27] 2025-06-05 22:19:17,829 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 18:19:27] 2025-06-05 22:19:18,113 | INFO     | [payload] control thread has finished
[2025-06-05 18:19:27] 2025-06-05 22:19:18,398 | INFO     | [job] validate thread has finished
[2025-06-05 18:19:27] 2025-06-05 22:19:18,408 | INFO     | [job] control thread has finished
[2025-06-05 18:19:27] 2025-06-05 22:19:18,409 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 18:19:27] 2025-06-05 22:19:18,529 | INFO     | [payload] validate_post thread has finished
[2025-06-05 18:19:27] 2025-06-05 22:19:18,568 | INFO     | [data] copytool_out thread has finished
[2025-06-05 18:19:27] 2025-06-05 22:19:18,718 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 18:19:27] 2025-06-05 22:19:18,815 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 18:19:27] 2025-06-05 22:19:19,042 | INFO     | [data] copytool_in thread has finished
[2025-06-05 18:19:27] 2025-06-05 22:19:20,720 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 18:19:27] 2025-06-05 22:19:21,923 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139740053038912)>', '<ExcThread(monitor, started 139739076212480)>']
[2025-06-05 18:19:27] 2025-06-05 22:19:22,561 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 18:19:27] 2025-06-05 22:19:22,561 | INFO     | [monitor] control thread has ended
[2025-06-05 18:19:27] 2025-06-05 22:19:26,940 | INFO     | all workflow threads have been joined
[2025-06-05 18:19:27] 2025-06-05 22:19:26,940 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 18:19:27] 2025-06-05 22:19:26,941 | INFO     | traces error code: 0
[2025-06-05 18:19:27] 2025-06-05 22:19:26,941 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 18:19:27] 2025-06-05 22:19:27,055 [wrapper] ==== pilot stdout END ====
[2025-06-05 18:19:27] 2025-06-05 22:19:27,060 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 18:19:27] 2025-06-05 22:19:27,065 [wrapper] pilotpid: 31816
[2025-06-05 18:19:27] 2025-06-05 22:19:27,069 [wrapper] Pilot exit status: 0
[2025-06-05 18:19:27] 2025-06-05 22:19:27,088 [wrapper] pandaids: 6669090461 6669090461
[2025-06-05 18:19:27] 2025-06-05 22:19:27,134 [wrapper] cleanup supervisor_pilot 18532 31817
[2025-06-05 18:19:27] 2025-06-05 22:19:27,139 [wrapper] Test setup, not cleaning
[2025-06-05 18:19:27] 2025-06-05 22:19:27,144 [wrapper] apfmon messages muted
[2025-06-05 18:19:27] 2025-06-05 22:19:27,148 [wrapper] ==== wrapper stdout END ====
[2025-06-05 18:19:27] 2025-06-05 22:19:27,153 [wrapper] ==== wrapper stderr END ====
[2025-06-05 18:19:27]  *** Error codes and diagnostics ***
[2025-06-05 18:19:27]     "exeErrorCode": 0,
[2025-06-05 18:19:27]     "exeErrorDiag": "",
[2025-06-05 18:19:27]     "pilotErrorCode": 0,
[2025-06-05 18:19:27]     "pilotErrorDiag": "",
[2025-06-05 18:19:27]  *** Listing of results directory ***
[2025-06-05 18:19:27] total 640812
[2025-06-05 18:19:27] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-06-05 18:19:27] -rw-r--r-- 1 boincer umatlas      5111 May 28 21:51 queuedata.json
[2025-06-05 18:19:27] -rw-r--r-- 1 boincer umatlas    495897 May 28 21:51 pilot3.tar.gz
[2025-06-05 18:19:27] -rwx------ 1 boincer umatlas     37140 May 28 21:53 runpilot2-wrapper.sh
[2025-06-05 18:19:27] -rw-r--r-- 1 boincer umatlas       100 Jun  5 13:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 18:19:27] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 13:59 run_atlas
[2025-06-05 18:19:27] -rw-r--r-- 1 boincer umatlas       105 Jun  5 13:59 job.xml
[2025-06-05 18:19:27] -rw-r--r-- 3 boincer umatlas 225502183 Jun  5 13:59 EVNT.44871834._003632.pool.root.1
[2025-06-05 18:19:27] -rw-r--r-- 3 boincer umatlas 225502183 Jun  5 13:59 ATLAS.root_0
[2025-06-05 18:19:27] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 13:59 start_atlas.sh
[2025-06-05 18:19:27] drwxrwx--x 2 boincer umatlas      4096 Jun  5 13:59 shared
[2025-06-05 18:19:27] -rw-r--r-- 2 boincer umatlas    508875 Jun  5 13:59 input.tar.gz
[2025-06-05 18:19:27] -rw-r--r-- 1 boincer umatlas         0 Jun  5 13:59 boinc_lockfile
[2025-06-05 18:19:27] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 15:29 pandaJob.out
[2025-06-05 18:19:27] -rw------- 1 boincer umatlas    987599 Jun  5 15:29 agis_schedconf.cvmfs.json
[2025-06-05 18:19:27] -rw-r--r-- 1 boincer umatlas      5826 Jun  5 18:09 init_data.xml
[2025-06-05 18:19:27] -rw-r--r-- 1 boincer umatlas       531 Jun  5 18:18 boinc_task_state.xml
[2025-06-05 18:19:27] -rw------- 1 boincer umatlas 198830593 Jun  5 18:18 HITS.44871837._093405.pool.root.1
[2025-06-05 18:19:27] -rw------- 1 boincer umatlas      1050 Jun  5 18:18 memory_monitor_summary.json
[2025-06-05 18:19:27] -rw-r--r-- 1 boincer umatlas        29 Jun  5 18:18 wrapper_checkpoint.txt
[2025-06-05 18:19:27] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 18:18 boinc_mmap_file
[2025-06-05 18:19:27] -rw------- 1 boincer umatlas   1598969 Jun  5 18:19 agis_ddmendpoints.agis.ALL.json
[2025-06-05 18:19:27] -rw------- 1 boincer umatlas    351776 Jun  5 18:19 log.44871837._093405.job.log.tgz.1
[2025-06-05 18:19:27] -rw------- 1 boincer umatlas        96 Jun  5 18:19 pilot_heartbeat.json
[2025-06-05 18:19:27] -rw------- 1 boincer umatlas      7755 Jun  5 18:19 heartbeat.json
[2025-06-05 18:19:27] -rw------- 1 boincer umatlas      4670 Jun  5 18:19 pilotlog.txt
[2025-06-05 18:19:27] -rw------- 1 boincer umatlas    907890 Jun  5 18:19 log.44871837._093405.job.log.1
[2025-06-05 18:19:27] -rw------- 1 boincer umatlas       357 Jun  5 18:19 output.list
[2025-06-05 18:19:27] -rw-r--r-- 1 boincer umatlas       620 Jun  5 18:19 runtime_log
[2025-06-05 18:19:27] -rw------- 1 boincer umatlas   1280000 Jun  5 18:19 result.tar.gz
[2025-06-05 18:19:27] -rw-r--r-- 1 boincer umatlas      8740 Jun  5 18:19 runtime_log.err
[2025-06-05 18:19:27] -rw------- 1 boincer umatlas       787 Jun  5 18:19 Fl7LDmNdhe7n9Rq4apOajLDm4fhM0noT9bVof3QYDm6QUKDmSM8aCn.diag
[2025-06-05 18:19:27] -rw-r--r-- 1 boincer umatlas     23390 Jun  5 18:19 stderr.txt
[2025-06-05 18:19:27] HITS file was successfully produced:
[2025-06-05 18:19:27] -rw------- 1 boincer umatlas 198830593 Jun  5 18:18 shared/HITS.pool.root.1
[2025-06-05 18:19:27]  *** Contents of shared directory: ***
[2025-06-05 18:19:27] total 416164
[2025-06-05 18:19:27] -rw-r--r-- 3 boincer umatlas 225502183 Jun  5 13:59 ATLAS.root_0
[2025-06-05 18:19:27] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 13:59 start_atlas.sh
[2025-06-05 18:19:27] -rw-r--r-- 2 boincer umatlas    508875 Jun  5 13:59 input.tar.gz
[2025-06-05 18:19:27] -rw------- 1 boincer umatlas 198830593 Jun  5 18:18 HITS.pool.root.1
[2025-06-05 18:19:27] -rw------- 1 boincer umatlas   1280000 Jun  5 18:19 result.tar.gz
18:19:28 (28220): run_atlas exited; CPU time 74464.883659
18:19:28 (28220): called boinc_finish(0)

</stderr_txt>
]]>

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