Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:32:06 (25479): wrapper (7.7.26015): starting
13:32:06 (25479): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 13:32:06] Arguments: --nthreads 8
[2025-06-05 13:32:06] Threads: 8
[2025-06-05 13:32:06] Checking for CVMFS
[2025-06-05 13:32:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 13:32:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 13:32:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 13:32:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 13:32:09] 2.11.2.0 74184 14438 321576 146827 3 210 15598073 18432000 22469 130560 0 83687467 99.621 62468549 44819 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 13:32:09] CVMFS is ok
[2025-06-05 13:32:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 13:32:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 13:32:09] Further information can be found at the LHC@home message board.
[2025-06-05 13:32:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 13:32:09] Checking for apptainer binary...
[2025-06-05 13:32:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 13:32:09] Running /usr/bin/apptainer --version
[2025-06-05 13:32:09] apptainer version 1.3.2-1.el7
[2025-06-05 13:32:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:32:32] c-212-13.aglt2.org
[2025-06-05 13:32:32] apptainer works
[2025-06-05 13:32:32] Set ATHENA_PROC_NUMBER=8
[2025-06-05 13:32:32] Set ATHENA_CORE_NUMBER=8
[2025-06-05 13:32:32] Starting ATLAS job with PandaID=6670834830
[2025-06-05 13:32:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 17:01:17]  *** The last 200 lines of the pilot log: ***
[2025-06-05 17:01:17] 2025-06-05 21:00:56,847 | INFO     | mean x: 1749151203.0050762
[2025-06-05 17:01:17] 2025-06-05 21:00:56,848 | INFO     | mean y: 2394584.4670050764
[2025-06-05 17:01:17] 2025-06-05 21:00:56,848 | INFO     | -- intersect: -81722811509.2431
[2025-06-05 17:01:17] 2025-06-05 21:00:56,848 | INFO     | intersect: -81722811509.2431
[2025-06-05 17:01:17] 2025-06-05 21:00:56,848 | INFO     | chi2: 6.062253351954827
[2025-06-05 17:01:17] 2025-06-05 21:00:56,848 | INFO     | sum of square deviations: 2194684291.9948006
[2025-06-05 17:01:17] 2025-06-05 21:00:56,849 | INFO     | sum of deviations: 107259047736.16663
[2025-06-05 17:01:17] 2025-06-05 21:00:56,849 | INFO     | mean x: 1749151050.5052083
[2025-06-05 17:01:17] 2025-06-05 21:00:56,849 | INFO     | mean y: 2391546.8333333335
[2025-06-05 17:01:17] 2025-06-05 21:00:56,849 | INFO     | -- intersect: -85482466894.18594
[2025-06-05 17:01:17] 2025-06-05 21:00:56,849 | INFO     | intersect: -85482466894.18594
[2025-06-05 17:01:17] 2025-06-05 21:00:56,850 | INFO     | chi2: 6.071900169148901
[2025-06-05 17:01:17] 2025-06-05 21:00:56,850 | INFO     | current chi2=6.071900169148901 (change=-0.15912923188806566 %)
[2025-06-05 17:01:17] 2025-06-05 21:00:56,850 | INFO     | right removable region: 191
[2025-06-05 17:01:17] 2025-06-05 21:00:56,850 | INFO     | sum of square deviations: 2194683681.9948006
[2025-06-05 17:01:17] 2025-06-05 21:00:56,851 | INFO     | sum of deviations: 44143536382.567726
[2025-06-05 17:01:17] 2025-06-05 21:00:56,851 | INFO     | mean x: 1749151355.5052083
[2025-06-05 17:01:17] 2025-06-05 21:00:56,851 | INFO     | mean y: 2452271.9322916665
[2025-06-05 17:01:17] 2025-06-05 21:00:56,851 | INFO     | -- intersect: -35179714130.37148
[2025-06-05 17:01:17] 2025-06-05 21:00:56,851 | INFO     | intersect: -35179714130.37148
[2025-06-05 17:01:17] 2025-06-05 21:00:56,852 | INFO     | chi2: 1.2585908084568715
[2025-06-05 17:01:17] 2025-06-05 21:00:56,852 | INFO     | current chi2=1.2585908084568715 (change=79.23889459270079 %)
[2025-06-05 17:01:17] 2025-06-05 21:00:56,852 | INFO     | sum of square deviations: 2027647686.994655
[2025-06-05 17:01:17] 2025-06-05 21:00:56,853 | INFO     | sum of deviations: 11723710717.048113
[2025-06-05 17:01:17] 2025-06-05 21:00:56,853 | INFO     | mean x: 1749151508.0053475
[2025-06-05 17:01:17] 2025-06-05 21:00:56,853 | INFO     | mean y: 2481697.9518716577
[2025-06-05 17:01:17] 2025-06-05 21:00:56,853 | INFO     | -- intersect: -10110984468.617537
[2025-06-05 17:01:17] 2025-06-05 21:00:56,853 | INFO     | intersect: -10110984468.617537
[2025-06-05 17:01:17] 2025-06-05 21:00:56,854 | INFO     | chi2: 0.0665282267381214
[2025-06-05 17:01:17] 2025-06-05 21:00:56,854 | INFO     | current chi2=0.0665282267381214 (change=94.714070189366 %)
[2025-06-05 17:01:17] 2025-06-05 21:00:56,854 | INFO     | sum of square deviations: 1869309529.4945054
[2025-06-05 17:01:17] 2025-06-05 21:00:56,855 | INFO     | sum of deviations: 4894480378.989011
[2025-06-05 17:01:17] 2025-06-05 21:00:56,855 | INFO     | mean x: 1749151660.5054946
[2025-06-05 17:01:17] 2025-06-05 21:00:56,855 | INFO     | mean y: 2488207.010989011
[2025-06-05 17:01:17] 2025-06-05 21:00:56,855 | INFO     | -- intersect: -4577378501.5994835
[2025-06-05 17:01:17] 2025-06-05 21:00:56,855 | INFO     | intersect: -4577378501.5994835
[2025-06-05 17:01:17] 2025-06-05 21:00:56,855 | INFO     | chi2: 0.0017386573281019443
[2025-06-05 17:01:17] 2025-06-05 21:00:56,855 | INFO     | current chi2=0.0017386573281019443 (change=97.3865869972066 %)
[2025-06-05 17:01:17] 2025-06-05 21:00:56,855 | INFO     | sum of square deviations: 1719436646.9943547
[2025-06-05 17:01:17] 2025-06-05 21:00:56,856 | INFO     | sum of deviations: 4753686932.497177
[2025-06-05 17:01:17] 2025-06-05 21:00:56,856 | INFO     | mean x: 1749151813.0056498
[2025-06-05 17:01:17] 2025-06-05 21:00:56,856 | INFO     | mean y: 2488346.5028248588
[2025-06-05 17:01:17] 2025-06-05 21:00:56,857 | INFO     | -- intersect: -4833351421.698883
[2025-06-05 17:01:17] 2025-06-05 21:00:56,857 | INFO     | intersect: -4833351421.698883
[2025-06-05 17:01:17] 2025-06-05 21:00:56,857 | INFO     | chi2: 0.0015979017463282753
[2025-06-05 17:01:17] 2025-06-05 21:00:56,857 | INFO     | current chi2=0.0015979017463282753 (change=8.095648262520417 %)
[2025-06-05 17:01:17] 2025-06-05 21:00:56,857 | INFO     | left removable region: 40
[2025-06-05 17:01:17] 2025-06-05 21:00:56,857 | INFO     | sum of square deviations: 1067561244.993379
[2025-06-05 17:01:17] 2025-06-05 21:00:56,858 | INFO     | sum of deviations: 2259687346.688741
[2025-06-05 17:01:17] 2025-06-05 21:00:56,858 | INFO     | mean x: 1749152240.0066226
[2025-06-05 17:01:17] 2025-06-05 21:00:56,858 | INFO     | mean y: 2489817.3112582783
[2025-06-05 17:01:17] 2025-06-05 21:00:56,858 | INFO     | -- intersect: -3699908712.7138243
[2025-06-05 17:01:17] 2025-06-05 21:00:56,858 | INFO     | intersect: -3699908712.7138243
[2025-06-05 17:01:17] 2025-06-05 21:00:56,858 | INFO     | chi2: 0.00033557061118976594
[2025-06-05 17:01:17] 2025-06-05 21:00:56,858 | INFO     | -- intersect: -3699908712.7138243
[2025-06-05 17:01:17] 2025-06-05 21:00:56,858 | INFO     | current memory leak: 2.12 B/s (using 151 data points, chi2=0.00)
[2025-06-05 17:01:17] 2025-06-05 21:00:56,859 | INFO     | ..............................
[2025-06-05 17:01:17] 2025-06-05 21:00:56,859 | INFO     | . Timing measurements:
[2025-06-05 17:01:17] 2025-06-05 21:00:56,859 | INFO     | . get job = 0 s
[2025-06-05 17:01:17] 2025-06-05 21:00:56,859 | INFO     | . initial setup = 11 s
[2025-06-05 17:01:17] 2025-06-05 21:00:56,859 | INFO     | . payload setup = 100 s
[2025-06-05 17:01:17] 2025-06-05 21:00:56,859 | INFO     | . stage-in = 0 s
[2025-06-05 17:01:17] 2025-06-05 21:00:56,859 | INFO     | . payload execution = 12095 s
[2025-06-05 17:01:17] 2025-06-05 21:00:56,859 | INFO     | . stage-out = 2 s
[2025-06-05 17:01:17] 2025-06-05 21:00:56,859 | INFO     | . log creation = 0 s
[2025-06-05 17:01:17] 2025-06-05 21:00:56,859 | INFO     | ..............................
[2025-06-05 17:01:17] 2025-06-05 21:00:56,935 | INFO     | 
[2025-06-05 17:01:17] 2025-06-05 21:00:56,936 | INFO     | job summary report
[2025-06-05 17:01:17] 2025-06-05 21:00:56,936 | INFO     | --------------------------------------------------
[2025-06-05 17:01:17] 2025-06-05 21:00:56,936 | INFO     | PanDA job id: 6670834830
[2025-06-05 17:01:17] 2025-06-05 21:00:56,936 | INFO     | task id: 44871837
[2025-06-05 17:01:17] 2025-06-05 21:00:56,936 | INFO     | errors: (none)
[2025-06-05 17:01:17] 2025-06-05 21:00:56,936 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 17:01:17] 2025-06-05 21:00:56,936 | INFO     | pilot state: finished 
[2025-06-05 17:01:17] 2025-06-05 21:00:56,936 | INFO     | transexitcode: 0
[2025-06-05 17:01:17] 2025-06-05 21:00:56,936 | INFO     | exeerrorcode: 0
[2025-06-05 17:01:17] 2025-06-05 21:00:56,936 | INFO     | exeerrordiag: 
[2025-06-05 17:01:17] 2025-06-05 21:00:56,936 | INFO     | exitcode: 0
[2025-06-05 17:01:17] 2025-06-05 21:00:56,936 | INFO     | exitmsg: OK
[2025-06-05 17:01:17] 2025-06-05 21:00:56,936 | INFO     | cpuconsumptiontime: 44545 s
[2025-06-05 17:01:17] 2025-06-05 21:00:56,937 | INFO     | nevents: 400
[2025-06-05 17:01:17] 2025-06-05 21:00:56,937 | INFO     | neventsw: 0
[2025-06-05 17:01:17] 2025-06-05 21:00:56,937 | INFO     | pid: 43703
[2025-06-05 17:01:17] 2025-06-05 21:00:56,937 | INFO     | pgrp: 43703
[2025-06-05 17:01:17] 2025-06-05 21:00:56,937 | INFO     | corecount: 8
[2025-06-05 17:01:17] 2025-06-05 21:00:56,937 | INFO     | event service: False
[2025-06-05 17:01:17] 2025-06-05 21:00:56,937 | INFO     | sizes: {0: 2397169, 1: 2397368, 12: 2397368, 23: 2397396, 33: 2397424, 44: 2397480, 55: 2397636, 66: 2397664, 67: 2397898, 76: 2397926, 12200: 2427800, 12202: 2436
[2025-06-05 17:01:17] 2025-06-05 21:00:56,937 | INFO     | --------------------------------------------------
[2025-06-05 17:01:17] 2025-06-05 21:00:56,937 | INFO     | 
[2025-06-05 17:01:17] 2025-06-05 21:00:56,937 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-06-05 17:01:17] 2025-06-05 21:00:56,954 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 17:01:17] 2025-06-05 21:00:56,954 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 17:01:17] 2025-06-05 21:00:56,955 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 17:01:17] 2025-06-05 21:00:56,955 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 17:01:17] 2025-06-05 21:00:56,955 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 17:01:17] 2025-06-05 21:00:56,955 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 17:01:17] 2025-06-05 21:00:56,955 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 17:01:17] 2025-06-05 21:00:56,955 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 17:01:17] 2025-06-05 21:00:56,955 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 17:01:17] 2025-06-05 21:00:56,955 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 17:01:17] 2025-06-05 21:00:56,955 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 17:01:17] 2025-06-05 21:00:56,955 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 17:01:17] 2025-06-05 21:00:56,955 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 17:01:17] 2025-06-05 21:00:56,955 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 17:01:17] 2025-06-05 21:00:56,955 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 17:01:17] 2025-06-05 21:00:56,955 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 17:01:17] 2025-06-05 21:00:56,955 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 17:01:17] 2025-06-05 21:00:56,955 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 17:01:17] 2025-06-05 21:00:56,956 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 17:01:17] 2025-06-05 21:00:56,956 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 17:01:17] 2025-06-05 21:00:56,956 | INFO     | job 6670834830 has completed (purged errors)
[2025-06-05 17:01:17] 2025-06-05 21:00:56,956 | INFO     | overall cleanup function is called
[2025-06-05 17:01:17] 2025-06-05 21:00:57,963 | INFO     | --- collectZombieJob: --- 10, [43703]
[2025-06-05 17:01:17] 2025-06-05 21:00:57,964 | INFO     | zombie collector waiting for pid 43703
[2025-06-05 17:01:17] 2025-06-05 21:00:57,964 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 17:01:17] 2025-06-05 21:00:57,964 | INFO     | collected zombie processes
[2025-06-05 17:01:17] 2025-06-05 21:00:57,964 | INFO     | will attempt to kill all subprocesses of pid=43703
[2025-06-05 17:01:17] 2025-06-05 21:00:58,160 | INFO     | process IDs to be killed: [43703] (in reverse order)
[2025-06-05 17:01:17] 2025-06-05 21:00:58,243 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 17:01:17] 2025-06-05 21:00:58,244 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 17:01:17] 2025-06-05 21:00:58,271 | INFO     | did not find any defunct processes belonging to 43703
[2025-06-05 17:01:17] 2025-06-05 21:00:58,317 | INFO     | did not find any defunct processes belonging to 43703
[2025-06-05 17:01:17] 2025-06-05 21:00:58,317 | INFO     | ready for new job
[2025-06-05 17:01:17] 2025-06-05 21:00:58,317 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 17:01:17] 2025-06-05 21:00:58,319 | INFO     | **************************************
[2025-06-05 17:01:17] 2025-06-05 21:00:58,319 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 17:01:17] 2025-06-05 21:00:58,319 | INFO     | **************************************
[2025-06-05 17:01:17] 2025-06-05 21:00:58,319 | INFO     | 
[2025-06-05 17:01:17] 2025-06-05 21:00:58,324 | INFO     | architecture information:
[2025-06-05 17:01:17] 2025-06-05 21:00:58,324 | INFO     | executing command: cat /etc/os-release
[2025-06-05 17:01:17] 2025-06-05 21:00:58,340 | INFO     | cat /etc/os-release:
[2025-06-05 17:01:17] NAME="CentOS Linux"
[2025-06-05 17:01:17] VERSION="7 (Core)"
[2025-06-05 17:01:17] ID="centos"
[2025-06-05 17:01:17] ID_LIKE="rhel fedora"
[2025-06-05 17:01:17] VERSION_ID="7"
[2025-06-05 17:01:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 17:01:17] ANSI_COLOR="0;31"
[2025-06-05 17:01:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 17:01:17] HOME_URL="https://www.centos.org/"
[2025-06-05 17:01:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 17:01:17] 
[2025-06-05 17:01:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 17:01:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 17:01:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 17:01:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 17:01:17] 
[2025-06-05 17:01:17] 2025-06-05 21:00:58,340 | INFO     | **************************************
[2025-06-05 17:01:17] 2025-06-05 21:00:58,843 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-06-05 17:01:17] 2025-06-05 21:00:58,897 | INFO     | sufficient remaining disk space (106241720320 B)
[2025-06-05 17:01:17] 2025-06-05 21:00:58,897 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 17:01:17] 2025-06-05 21:00:58,897 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 17:01:17] 2025-06-05 21:00:58,897 | INFO     | update_server=False
[2025-06-05 17:01:17] 2025-06-05 21:00:58,897 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 17:01:17] 2025-06-05 21:00:58,898 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 17:01:17] 2025-06-05 21:00:58,898 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:01:17] 2025-06-05 21:00:58,902 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 17:01:17] 2025-06-05 21:00:58,902 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 17:01:17] 2025-06-05 21:00:58,903 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 17:01:17] 2025-06-05 21:00:58,903 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 17:01:17] 2025-06-05 21:00:59,162 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:01:17] 2025-06-05 21:00:59,163 | INFO     | aborting loop
[2025-06-05 17:01:17] 2025-06-05 21:00:59,605 | INFO     | all data control threads have been joined
[2025-06-05 17:01:17] 2025-06-05 21:00:59,863 | INFO     | all payload control threads have been joined
[2025-06-05 17:01:17] 2025-06-05 21:00:59,903 | INFO     | [job] retrieve thread has finished
[2025-06-05 17:01:17] 2025-06-05 21:00:59,904 | INFO     | [job] queue monitor thread has finished
[2025-06-05 17:01:17] 2025-06-05 21:01:00,158 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 17:01:17] 2025-06-05 21:01:00,168 | INFO     | [job] job monitor thread has finished
[2025-06-05 17:01:17] 2025-06-05 21:01:00,171 | INFO     | [payload] failed_post thread has finished
[2025-06-05 17:01:17] 2025-06-05 21:01:00,607 | INFO     | all job control threads have been joined
[2025-06-05 17:01:17] 2025-06-05 21:01:00,610 | INFO     | [data] control thread has finished
[2025-06-05 17:01:17] 2025-06-05 21:01:00,633 | INFO     | [job] validate thread has finished
[2025-06-05 17:01:17] 2025-06-05 21:01:00,647 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 17:01:17] 2025-06-05 21:01:00,719 | INFO     | [data] copytool_in thread has finished
[2025-06-05 17:01:17] 2025-06-05 21:01:00,737 | INFO     | [payload] validate_post thread has finished
[2025-06-05 17:01:17] 2025-06-05 21:01:00,869 | INFO     | [payload] control thread has finished
[2025-06-05 17:01:17] 2025-06-05 21:01:00,904 | INFO     | [data] copytool_out thread has finished
[2025-06-05 17:01:17] 2025-06-05 21:01:01,043 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 17:01:17] 2025-06-05 21:01:01,058 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 17:01:17] 2025-06-05 21:01:01,613 | INFO     | [job] control thread has finished
[2025-06-05 17:01:17] 2025-06-05 21:01:05,066 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 17:01:17] 2025-06-05 21:01:09,586 | INFO     | job.realtimelogging is not enabled
[2025-06-05 17:01:17] 2025-06-05 21:01:10,591 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 17:01:17] 2025-06-05 21:01:10,971 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140332340201280)>', '<ExcThread(monitor, started 140331530049280)>']
[2025-06-05 17:01:17] 2025-06-05 21:01:11,974 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 17:01:17] 2025-06-05 21:01:11,974 | INFO     | [monitor] control thread has ended
[2025-06-05 17:01:17] 2025-06-05 21:01:15,996 | INFO     | all workflow threads have been joined
[2025-06-05 17:01:17] 2025-06-05 21:01:15,996 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 17:01:17] 2025-06-05 21:01:15,997 | INFO     | traces error code: 0
[2025-06-05 17:01:17] 2025-06-05 21:01:15,997 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 17:01:17] 2025-06-05 21:01:16,104 [wrapper] ==== pilot stdout END ====
[2025-06-05 17:01:17] 2025-06-05 21:01:16,107 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 17:01:17] 2025-06-05 21:01:16,110 [wrapper] pilotpid: 33664
[2025-06-05 17:01:17] 2025-06-05 21:01:16,114 [wrapper] Pilot exit status: 0
[2025-06-05 17:01:17] 2025-06-05 21:01:16,253 [wrapper] pandaids: 6670834830
[2025-06-05 17:01:17] 2025-06-05 21:01:16,315 [wrapper] cleanup supervisor_pilot 41133 33665
[2025-06-05 17:01:17] 2025-06-05 21:01:16,318 [wrapper] Test setup, not cleaning
[2025-06-05 17:01:17] 2025-06-05 21:01:16,336 [wrapper] apfmon messages muted
[2025-06-05 17:01:17] 2025-06-05 21:01:16,359 [wrapper] ==== wrapper stdout END ====
[2025-06-05 17:01:17] 2025-06-05 21:01:16,362 [wrapper] ==== wrapper stderr END ====
[2025-06-05 17:01:17]  *** Error codes and diagnostics ***
[2025-06-05 17:01:17]     "exeErrorCode": 0,
[2025-06-05 17:01:17]     "exeErrorDiag": "",
[2025-06-05 17:01:17]     "pilotErrorCode": 0,
[2025-06-05 17:01:17]     "pilotErrorDiag": "",
[2025-06-05 17:01:17]  *** Listing of results directory ***
[2025-06-05 17:01:17] total 417080
[2025-06-05 17:01:17] -rw-r--r-- 1 boincer umatlas      5111 May 29 06:48 queuedata.json
[2025-06-05 17:01:17] -rwx------ 1 boincer umatlas     37140 May 29 06:51 runpilot2-wrapper.sh
[2025-06-05 17:01:17] -rw-r--r-- 1 boincer umatlas    495897 May 29 06:51 pilot3.tar.gz
[2025-06-05 17:01:17] -rw-r--r-- 1 boincer umatlas       100 Jun  5 13:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 17:01:17] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 13:32 run_atlas
[2025-06-05 17:01:17] -rw-r--r-- 1 boincer umatlas       105 Jun  5 13:32 job.xml
[2025-06-05 17:01:17] -rw-r--r-- 2 boincer umatlas 223967259 Jun  5 13:32 EVNT.44871834._000524.pool.root.1
[2025-06-05 17:01:17] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 13:32 start_atlas.sh
[2025-06-05 17:01:17] drwxrwx--x 2 boincer umatlas      4096 Jun  5 13:32 shared
[2025-06-05 17:01:17] -rw-r--r-- 2 boincer umatlas    508876 Jun  5 13:32 input.tar.gz
[2025-06-05 17:01:17] -rw-r--r-- 1 boincer umatlas         0 Jun  5 13:32 boinc_lockfile
[2025-06-05 17:01:17] -rw-r--r-- 1 boincer umatlas      2558 Jun  5 13:32 pandaJob.out
[2025-06-05 17:01:17] -rw------- 1 boincer umatlas    983229 Jun  5 13:34 agis_schedconf.cvmfs.json
[2025-06-05 17:01:17] drwx------ 4 boincer umatlas      4096 Jun  5 13:35 pilot3
[2025-06-05 17:01:17] -rw-r--r-- 1 boincer umatlas      6388 Jun  5 16:55 init_data.xml
[2025-06-05 17:01:17] -rw------- 1 boincer umatlas 196354207 Jun  5 17:00 HITS.44871837._099026.pool.root.1
[2025-06-05 17:01:17] -rw-r--r-- 1 boincer umatlas       531 Jun  5 17:00 boinc_task_state.xml
[2025-06-05 17:01:17] -rw------- 1 boincer umatlas        95 Jun  5 17:00 pilot_heartbeat.json
[2025-06-05 17:01:17] -rw------- 1 boincer umatlas      1080 Jun  5 17:00 memory_monitor_summary.json
[2025-06-05 17:01:17] -rw------- 1 boincer umatlas   1598969 Jun  5 17:00 agis_ddmendpoints.agis.ALL.json
[2025-06-05 17:01:17] -rw------- 1 boincer umatlas    376865 Jun  5 17:00 log.44871837._099026.job.log.tgz.1
[2025-06-05 17:01:17] -rw------- 1 boincer umatlas      7752 Jun  5 17:00 heartbeat.json
[2025-06-05 17:01:17] -rw-r--r-- 1 boincer umatlas        28 Jun  5 17:01 wrapper_checkpoint.txt
[2025-06-05 17:01:17] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 17:01 boinc_mmap_file
[2025-06-05 17:01:17] -rw------- 1 boincer umatlas      4549 Jun  5 17:01 pilotlog.txt
[2025-06-05 17:01:17] -rw------- 1 boincer umatlas   1090585 Jun  5 17:01 log.44871837._099026.job.log.1
[2025-06-05 17:01:17] -rw------- 1 boincer umatlas       357 Jun  5 17:01 output.list
[2025-06-05 17:01:17] -rw-r--r-- 1 boincer umatlas       620 Jun  5 17:01 runtime_log
[2025-06-05 17:01:17] -rw------- 1 boincer umatlas   1484800 Jun  5 17:01 result.tar.gz
[2025-06-05 17:01:17] -rw-r--r-- 1 boincer umatlas      8660 Jun  5 17:01 runtime_log.err
[2025-06-05 17:01:17] -rw------- 1 boincer umatlas       662 Jun  5 17:01 a6rKDmC2pe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgMeKDmNymlRo.diag
[2025-06-05 17:01:17] -rw-r--r-- 1 boincer umatlas     20886 Jun  5 17:01 stderr.txt
[2025-06-05 17:01:17] HITS file was successfully produced:
[2025-06-05 17:01:17] -rw------- 1 boincer umatlas 196354207 Jun  5 17:00 shared/HITS.pool.root.1
[2025-06-05 17:01:17]  *** Contents of shared directory: ***
[2025-06-05 17:01:17] total 412448
[2025-06-05 17:01:17] -rw-r--r-- 2 boincer umatlas 223967259 Jun  5 13:32 ATLAS.root_0
[2025-06-05 17:01:17] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 13:32 start_atlas.sh
[2025-06-05 17:01:17] -rw-r--r-- 2 boincer umatlas    508876 Jun  5 13:32 input.tar.gz
[2025-06-05 17:01:17] -rw------- 1 boincer umatlas 196354207 Jun  5 17:00 HITS.pool.root.1
[2025-06-05 17:01:17] -rw------- 1 boincer umatlas   1484800 Jun  5 17:01 result.tar.gz
17:01:18 (25479): run_atlas exited; CPU time 44188.237494
17:01:18 (25479): called boinc_finish(0)

</stderr_txt>
]]>

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