Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:27:32 (18625): wrapper (7.7.26015): starting
13:27:32 (18625): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 13:27:32] Arguments: --nthreads 8
[2025-06-05 13:27:32] Threads: 8
[2025-06-05 13:27:32] Checking for CVMFS
[2025-06-05 13:27:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 13:27:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 13:27:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 13:27:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 13:27:33] 2.11.2.0 2692 24700 94352 146827 3 1 19035708 20275200 1 130560 0 9058237 99.957 4733169 6068 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 13:27:33] CVMFS is ok
[2025-06-05 13:27:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 13:27:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 13:27:33] Further information can be found at the LHC@home message board.
[2025-06-05 13:27:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 13:27:33] Checking for apptainer binary...
[2025-06-05 13:27:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 13:27:33] Running /usr/bin/apptainer --version
[2025-06-05 13:27:33] apptainer version 1.3.2-1.el7
[2025-06-05 13:27:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:27:34] c-204-1.aglt2.org
[2025-06-05 13:27:34] apptainer works
[2025-06-05 13:27:34] Set ATHENA_PROC_NUMBER=8
[2025-06-05 13:27:34] Set ATHENA_CORE_NUMBER=8
[2025-06-05 13:27:34] Starting ATLAS job with PandaID=6681044163
[2025-06-05 13:27:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 15:24:54]  *** The last 200 lines of the pilot log: ***
[2025-06-05 15:24:54] 2025-06-05 19:24:18,282 | INFO     | monitor loop #526: job 0:6681044163 is in state 'finished'
[2025-06-05 15:24:54] 2025-06-05 19:24:18,283 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 15:24:54] 2025-06-05 19:24:20,786 | INFO     | monitor loop #527: job 0:6681044163 is in state 'finished'
[2025-06-05 15:24:54] 2025-06-05 19:24:20,786 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 15:24:54] 2025-06-05 19:24:22,431 | INFO     | PID=22589 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 15:24:54] 2025-06-05 19:24:23,076 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 15:24:54] 2025-06-05 19:24:23,080 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-06-05 15:24:54] 2025-06-05 19:24:23,082 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6681044163/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 15:24:54] 2025-06-05 19:24:23,083 | INFO     | extracted standard info from prmon json
[2025-06-05 15:24:54] 2025-06-05 19:24:23,083 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 15:24:54] 2025-06-05 19:24:23,083 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 15:24:54] 2025-06-05 19:24:23,084 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 15:24:54] 2025-06-05 19:24:23,084 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 15:24:54] 2025-06-05 19:24:23,087 | INFO     | fitting pss+swap vs Time
[2025-06-05 15:24:54] 2025-06-05 19:24:23,087 | INFO     | sum of square deviations: 459366752.5
[2025-06-05 15:24:54] 2025-06-05 19:24:23,088 | INFO     | sum of deviations: 82514089.99999589
[2025-06-05 15:24:54] 2025-06-05 19:24:23,088 | INFO     | mean x: 1749147952.5
[2025-06-05 15:24:54] 2025-06-05 19:24:23,088 | INFO     | mean y: 2529464.5263157897
[2025-06-05 15:24:54] 2025-06-05 19:24:23,088 | INFO     | -- intersect: -311662519.96192497
[2025-06-05 15:24:54] 2025-06-05 19:24:23,088 | INFO     | intersect: -311662519.96192497
[2025-06-05 15:24:54] 2025-06-05 19:24:23,088 | INFO     | chi2: 1.7027133064460906
[2025-06-05 15:24:54] 2025-06-05 19:24:23,089 | INFO     | sum of square deviations: 401533110.0
[2025-06-05 15:24:54] 2025-06-05 19:24:23,089 | INFO     | sum of deviations: 517448665.00000304
[2025-06-05 15:24:54] 2025-06-05 19:24:23,089 | INFO     | mean x: 1749147800.0
[2025-06-05 15:24:54] 2025-06-05 19:24:23,089 | INFO     | mean y: 2530612.2660550456
[2025-06-05 15:24:54] 2025-06-05 19:24:23,090 | INFO     | -- intersect: -2251565429.7706585
[2025-06-05 15:24:54] 2025-06-05 19:24:23,090 | INFO     | intersect: -2251565429.7706585
[2025-06-05 15:24:54] 2025-06-05 19:24:23,090 | INFO     | chi2: 1.7050096418035374
[2025-06-05 15:24:54] 2025-06-05 19:24:23,090 | INFO     | current chi2=1.7050096418035374 (change=-0.13486330016646764 %)
[2025-06-05 15:24:54] 2025-06-05 19:24:23,090 | INFO     | right removable region: 108
[2025-06-05 15:24:54] 2025-06-05 19:24:23,090 | INFO     | sum of square deviations: 401533110.0
[2025-06-05 15:24:54] 2025-06-05 19:24:23,091 | INFO     | sum of deviations: -17722689106.999996
[2025-06-05 15:24:54] 2025-06-05 19:24:23,091 | INFO     | mean x: 1749148105.0
[2025-06-05 15:24:54] 2025-06-05 19:24:23,091 | INFO     | mean y: 2575489.119266055
[2025-06-05 15:24:54] 2025-06-05 19:24:23,091 | INFO     | -- intersect: 77205693476.10963
[2025-06-05 15:24:54] 2025-06-05 19:24:23,091 | INFO     | intersect: 77205693476.10963
[2025-06-05 15:24:54] 2025-06-05 19:24:23,092 | INFO     | chi2: 0.1284539172155839
[2025-06-05 15:24:54] 2025-06-05 19:24:23,092 | INFO     | current chi2=0.1284539172155839 (change=92.45592803384538 %)
[2025-06-05 15:24:54] 2025-06-05 19:24:23,092 | INFO     | sum of square deviations: 348769330.0
[2025-06-05 15:24:54] 2025-06-05 19:24:23,093 | INFO     | sum of deviations: -17517454851.0
[2025-06-05 15:24:54] 2025-06-05 19:24:23,093 | INFO     | mean x: 1749148257.5
[2025-06-05 15:24:54] 2025-06-05 19:24:23,093 | INFO     | mean y: 2574739.230769231
[2025-06-05 15:24:54] 2025-06-05 19:24:23,093 | INFO     | -- intersect: 87856130063.20828
[2025-06-05 15:24:54] 2025-06-05 19:24:23,093 | INFO     | intersect: 87856130063.20828
[2025-06-05 15:24:54] 2025-06-05 19:24:23,093 | INFO     | chi2: 0.10191451562541061
[2025-06-05 15:24:54] 2025-06-05 19:24:23,093 | INFO     | current chi2=0.10191451562541061 (change=20.660640146638958 %)
[2025-06-05 15:24:54] 2025-06-05 19:24:23,094 | INFO     | left removable region: 20
[2025-06-05 15:24:54] 2025-06-05 19:24:23,094 | INFO     | sum of square deviations: 211285822.0
[2025-06-05 15:24:54] 2025-06-05 19:24:23,094 | INFO     | sum of deviations: -10613963827.000002
[2025-06-05 15:24:54] 2025-06-05 19:24:23,094 | INFO     | mean x: 1749148379.5
[2025-06-05 15:24:54] 2025-06-05 19:24:23,094 | INFO     | mean y: 2557816.8863636362
[2025-06-05 15:24:54] 2025-06-05 19:24:23,095 | INFO     | -- intersect: 87871196859.16281
[2025-06-05 15:24:54] 2025-06-05 19:24:23,095 | INFO     | intersect: 87871196859.16281
[2025-06-05 15:24:54] 2025-06-05 19:24:23,095 | INFO     | chi2: 0.09088460997836104
[2025-06-05 15:24:54] 2025-06-05 19:24:23,095 | INFO     | -- intersect: 87871196859.16281
[2025-06-05 15:24:54] 2025-06-05 19:24:23,095 | INFO     | current memory leak: -50.24 B/s (using 88 data points, chi2=0.09)
[2025-06-05 15:24:54] 2025-06-05 19:24:23,096 | INFO     | could have reported an average CPU frequency of 1945 MHz (7 samples)
[2025-06-05 15:24:54] 2025-06-05 19:24:23,096 | INFO     | ..............................
[2025-06-05 15:24:54] 2025-06-05 19:24:23,096 | INFO     | . Timing measurements:
[2025-06-05 15:24:54] 2025-06-05 19:24:23,096 | INFO     | . get job = 0 s
[2025-06-05 15:24:54] 2025-06-05 19:24:23,096 | INFO     | . initial setup = 2 s
[2025-06-05 15:24:54] 2025-06-05 19:24:23,096 | INFO     | . payload setup = 11 s
[2025-06-05 15:24:54] 2025-06-05 19:24:23,096 | INFO     | . stage-in = 0 s
[2025-06-05 15:24:54] 2025-06-05 19:24:23,096 | INFO     | . payload execution = 6948 s
[2025-06-05 15:24:54] 2025-06-05 19:24:23,097 | INFO     | . stage-out = 0 s
[2025-06-05 15:24:54] 2025-06-05 19:24:23,097 | INFO     | . log creation = 0 s
[2025-06-05 15:24:54] 2025-06-05 19:24:23,097 | INFO     | ..............................
[2025-06-05 15:24:54] 2025-06-05 19:24:23,367 | INFO     | 
[2025-06-05 15:24:54] 2025-06-05 19:24:23,368 | INFO     | job summary report
[2025-06-05 15:24:54] 2025-06-05 19:24:23,368 | INFO     | --------------------------------------------------
[2025-06-05 15:24:54] 2025-06-05 19:24:23,368 | INFO     | PanDA job id: 6681044163
[2025-06-05 15:24:54] 2025-06-05 19:24:23,368 | INFO     | task id: 45006595
[2025-06-05 15:24:54] 2025-06-05 19:24:23,368 | INFO     | errors: (none)
[2025-06-05 15:24:54] 2025-06-05 19:24:23,368 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 15:24:54] 2025-06-05 19:24:23,369 | INFO     | pilot state: finished 
[2025-06-05 15:24:54] 2025-06-05 19:24:23,369 | INFO     | transexitcode: 0
[2025-06-05 15:24:54] 2025-06-05 19:24:23,369 | INFO     | exeerrorcode: 0
[2025-06-05 15:24:54] 2025-06-05 19:24:23,369 | INFO     | exeerrordiag: 
[2025-06-05 15:24:54] 2025-06-05 19:24:23,369 | INFO     | exitcode: 0
[2025-06-05 15:24:54] 2025-06-05 19:24:23,369 | INFO     | exitmsg: OK
[2025-06-05 15:24:54] 2025-06-05 19:24:23,370 | INFO     | cpuconsumptiontime: 51140 s
[2025-06-05 15:24:54] 2025-06-05 19:24:23,370 | INFO     | nevents: 400
[2025-06-05 15:24:54] 2025-06-05 19:24:23,370 | INFO     | neventsw: 0
[2025-06-05 15:24:54] 2025-06-05 19:24:23,370 | INFO     | pid: 29129
[2025-06-05 15:24:54] 2025-06-05 19:24:23,370 | INFO     | pgrp: 29129
[2025-06-05 15:24:54] 2025-06-05 19:24:23,371 | INFO     | corecount: 8
[2025-06-05 15:24:54] 2025-06-05 19:24:23,371 | INFO     | event service: False
[2025-06-05 15:24:54] 2025-06-05 19:24:23,371 | INFO     | sizes: {0: 2397407, 1: 2397606, 7: 2397868, 12: 2397896, 6964: 2425258, 6966: 2434199, 6967: 2434383, 6974: 2434577}
[2025-06-05 15:24:54] 2025-06-05 19:24:23,371 | INFO     | --------------------------------------------------
[2025-06-05 15:24:54] 2025-06-05 19:24:23,371 | INFO     | 
[2025-06-05 15:24:54] 2025-06-05 19:24:23,371 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 15:24:54] 2025-06-05 19:24:23,401 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 15:24:54] 2025-06-05 19:24:23,402 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 15:24:54] 2025-06-05 19:24:23,402 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 15:24:54] 2025-06-05 19:24:23,402 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 15:24:54] 2025-06-05 19:24:23,402 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 15:24:54] 2025-06-05 19:24:23,402 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 15:24:54] 2025-06-05 19:24:23,402 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 15:24:54] 2025-06-05 19:24:23,403 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 15:24:54] 2025-06-05 19:24:23,403 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 15:24:54] 2025-06-05 19:24:23,403 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 15:24:54] 2025-06-05 19:24:23,403 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 15:24:54] 2025-06-05 19:24:23,404 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 15:24:54] 2025-06-05 19:24:23,404 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 15:24:54] 2025-06-05 19:24:23,404 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 15:24:54] 2025-06-05 19:24:23,404 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 15:24:54] 2025-06-05 19:24:23,404 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 15:24:54] 2025-06-05 19:24:23,405 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 15:24:54] 2025-06-05 19:24:23,405 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 15:24:54] 2025-06-05 19:24:23,405 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 15:24:54] 2025-06-05 19:24:23,405 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 15:24:54] 2025-06-05 19:24:23,405 | INFO     | job 6681044163 has completed (purged errors)
[2025-06-05 15:24:54] 2025-06-05 19:24:23,406 | INFO     | overall cleanup function is called
[2025-06-05 15:24:54] 2025-06-05 19:24:24,413 | INFO     | --- collectZombieJob: --- 10, [29129]
[2025-06-05 15:24:54] 2025-06-05 19:24:24,414 | INFO     | zombie collector waiting for pid 29129
[2025-06-05 15:24:54] 2025-06-05 19:24:24,414 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 15:24:54] 2025-06-05 19:24:24,414 | INFO     | collected zombie processes
[2025-06-05 15:24:54] 2025-06-05 19:24:24,414 | INFO     | will attempt to kill all subprocesses of pid=29129
[2025-06-05 15:24:54] 2025-06-05 19:24:24,485 | INFO     | process IDs to be killed: [29129] (in reverse order)
[2025-06-05 15:24:54] 2025-06-05 19:24:24,539 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 15:24:54] 2025-06-05 19:24:24,540 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 15:24:54] 2025-06-05 19:24:24,544 | INFO     | did not find any defunct processes belonging to 29129
[2025-06-05 15:24:54] 2025-06-05 19:24:24,546 | INFO     | did not find any defunct processes belonging to 29129
[2025-06-05 15:24:54] 2025-06-05 19:24:24,547 | INFO     | ready for new job
[2025-06-05 15:24:54] 2025-06-05 19:24:24,547 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 15:24:54] 2025-06-05 19:24:24,548 | INFO     | ***************************************
[2025-06-05 15:24:54] 2025-06-05 19:24:24,548 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-05 15:24:54] 2025-06-05 19:24:24,548 | INFO     | ***************************************
[2025-06-05 15:24:54] 2025-06-05 19:24:24,548 | INFO     | 
[2025-06-05 15:24:54] 2025-06-05 19:24:24,549 | INFO     | architecture information:
[2025-06-05 15:24:54] 2025-06-05 19:24:24,550 | INFO     | executing command: cat /etc/os-release
[2025-06-05 15:24:54] 2025-06-05 19:24:24,567 | INFO     | cat /etc/os-release:
[2025-06-05 15:24:54] NAME="CentOS Linux"
[2025-06-05 15:24:54] VERSION="7 (Core)"
[2025-06-05 15:24:54] ID="centos"
[2025-06-05 15:24:54] ID_LIKE="rhel fedora"
[2025-06-05 15:24:54] VERSION_ID="7"
[2025-06-05 15:24:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 15:24:54] ANSI_COLOR="0;31"
[2025-06-05 15:24:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 15:24:54] HOME_URL="https://www.centos.org/"
[2025-06-05 15:24:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 15:24:54] 
[2025-06-05 15:24:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 15:24:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 15:24:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 15:24:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 15:24:54] 
[2025-06-05 15:24:54] 2025-06-05 19:24:24,567 | INFO     | ***************************************
[2025-06-05 15:24:54] 2025-06-05 19:24:25,070 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 15:24:54] 2025-06-05 19:24:25,092 | INFO     | sufficient remaining disk space (18643681280 B)
[2025-06-05 15:24:54] 2025-06-05 19:24:25,092 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 15:24:54] 2025-06-05 19:24:25,093 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 15:24:54] 2025-06-05 19:24:25,093 | INFO     | update_server=False
[2025-06-05 15:24:54] 2025-06-05 19:24:25,093 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 15:24:54] 2025-06-05 19:24:25,093 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:24:54] 2025-06-05 19:24:25,094 | INFO     | aborting loop
[2025-06-05 15:24:54] 2025-06-05 19:24:25,094 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:24:54] 2025-06-05 19:24:25,393 | INFO     | all payload control threads have been joined
[2025-06-05 15:24:54] 2025-06-05 19:24:25,840 | INFO     | all data control threads have been joined
[2025-06-05 15:24:54] 2025-06-05 19:24:25,906 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 15:24:54] 2025-06-05 19:24:26,099 | INFO     | [job] retrieve thread has finished
[2025-06-05 15:24:54] 2025-06-05 19:24:26,099 | INFO     | [job] job monitor thread has finished
[2025-06-05 15:24:54] 2025-06-05 19:24:26,100 | INFO     | [job] queue monitor thread has finished
[2025-06-05 15:24:54] 2025-06-05 19:24:26,110 | INFO     | [job] validate thread has finished
[2025-06-05 15:24:54] 2025-06-05 19:24:26,328 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 15:24:54] 2025-06-05 19:24:26,399 | INFO     | [payload] control thread has finished
[2025-06-05 15:24:54] 2025-06-05 19:24:26,534 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 15:24:54] 2025-06-05 19:24:26,595 | INFO     | [payload] failed_post thread has finished
[2025-06-05 15:24:54] 2025-06-05 19:24:26,646 | INFO     | all job control threads have been joined
[2025-06-05 15:24:54] 2025-06-05 19:24:26,668 | INFO     | [data] copytool_in thread has finished
[2025-06-05 15:24:54] 2025-06-05 19:24:26,682 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 15:24:54] 2025-06-05 19:24:26,773 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 15:24:54] 2025-06-05 19:24:26,846 | INFO     | [data] control thread has finished
[2025-06-05 15:24:54] 2025-06-05 19:24:27,123 | INFO     | [payload] validate_post thread has finished
[2025-06-05 15:24:54] 2025-06-05 19:24:27,258 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 15:24:54] 2025-06-05 19:24:27,651 | INFO     | [job] control thread has finished
[2025-06-05 15:24:54] 2025-06-05 19:24:27,911 | INFO     | [data] copytool_out thread has finished
[2025-06-05 15:24:54] 2025-06-05 19:24:30,334 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 15:24:54] 2025-06-05 19:24:30,643 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140503282816832)>', '<ExcThread(monitor, started 140502338893568)>']
[2025-06-05 15:24:54] 2025-06-05 19:24:35,668 | INFO     | all workflow threads have been joined
[2025-06-05 15:24:54] 2025-06-05 19:24:35,669 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 15:24:54] 2025-06-05 19:24:35,669 | INFO     | traces error code: 0
[2025-06-05 15:24:54] 2025-06-05 19:24:35,669 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 15:24:54] 2025-06-05 19:24:54,615 | INFO     | PID=22589 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 15:24:54] 2025-06-05 19:24:54,615 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 15:24:54] 2025-06-05 19:24:54,615 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 15:24:54] 2025-06-05 19:24:54,615 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 15:24:54] 2025-06-05 19:24:54,615 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 15:24:54] 2025-06-05 19:24:54,616 | INFO     | [monitor] control thread has ended
[2025-06-05 15:24:54] 2025-06-05 19:24:54,721 [wrapper] ==== pilot stdout END ====
[2025-06-05 15:24:54] 2025-06-05 19:24:54,725 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 15:24:54] 2025-06-05 19:24:54,730 [wrapper] pilotpid: 22589
[2025-06-05 15:24:54] 2025-06-05 19:24:54,735 [wrapper] Pilot exit status: 0
[2025-06-05 15:24:54] 2025-06-05 19:24:54,752 [wrapper] pandaids: 6681044163
[2025-06-05 15:24:54] 2025-06-05 19:24:54,795 [wrapper] cleanup supervisor_pilot  7450 22590
[2025-06-05 15:24:54] 2025-06-05 19:24:54,800 [wrapper] Test setup, not cleaning
[2025-06-05 15:24:54] 2025-06-05 19:24:54,805 [wrapper] apfmon messages muted
[2025-06-05 15:24:54] 2025-06-05 19:24:54,810 [wrapper] ==== wrapper stdout END ====
[2025-06-05 15:24:54] 2025-06-05 19:24:54,814 [wrapper] ==== wrapper stderr END ====
[2025-06-05 15:24:54]  *** Error codes and diagnostics ***
[2025-06-05 15:24:54]     "exeErrorCode": 0,
[2025-06-05 15:24:54]     "exeErrorDiag": "",
[2025-06-05 15:24:54]     "pilotErrorCode": 0,
[2025-06-05 15:24:54]     "pilotErrorDiag": "",
[2025-06-05 15:24:54]  *** Listing of results directory ***
[2025-06-05 15:24:54] total 393536
[2025-06-05 15:24:54] -rw-r--r-- 1 boincer boincer    529402 Jun  5 12:56 pilot3.tar.gz
[2025-06-05 15:24:54] -rw-r--r-- 1 boincer boincer      5112 Jun  5 13:26 queuedata.json
[2025-06-05 15:24:54] -rwx------ 1 boincer boincer     37140 Jun  5 13:27 runpilot2-wrapper.sh
[2025-06-05 15:24:54] -rw-r--r-- 1 boincer boincer       100 Jun  5 13:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 15:24:54] -rwxr-xr-x 1 boincer boincer      7986 Jun  5 13:27 run_atlas
[2025-06-05 15:24:54] -rw-r--r-- 1 boincer boincer       105 Jun  5 13:27 job.xml
[2025-06-05 15:24:54] -rw-r--r-- 2 boincer boincer 212812714 Jun  5 13:27 EVNT.45006593._000590.pool.root.1
[2025-06-05 15:24:54] -rw-r--r-- 2 boincer boincer     15095 Jun  5 13:27 start_atlas.sh
[2025-06-05 15:24:54] drwxrwx--x 2 boincer boincer      4096 Jun  5 13:27 shared
[2025-06-05 15:24:54] -rw-r--r-- 2 boincer boincer    541918 Jun  5 13:27 input.tar.gz
[2025-06-05 15:24:54] -rw-r--r-- 1 boincer boincer         0 Jun  5 13:27 boinc_lockfile
[2025-06-05 15:24:54] -rw-r--r-- 1 boincer boincer      2522 Jun  5 13:27 pandaJob.out
[2025-06-05 15:24:54] -rw------- 1 boincer boincer    983229 Jun  5 13:27 agis_schedconf.cvmfs.json
[2025-06-05 15:24:54] -rw------- 1 boincer boincer   1598969 Jun  5 13:27 agis_ddmendpoints.agis.ALL.json
[2025-06-05 15:24:54] drwx------ 4 boincer boincer      4096 Jun  5 13:27 pilot3
[2025-06-05 15:24:54] -rw-r--r-- 1 boincer boincer      5823 Jun  5 15:22 init_data.xml
[2025-06-05 15:24:54] -rw------- 1 boincer boincer 184356114 Jun  5 15:23 HITS.45006595._057108.pool.root.1
[2025-06-05 15:24:54] -rw-r--r-- 1 boincer boincer       529 Jun  5 15:23 boinc_task_state.xml
[2025-06-05 15:24:54] -rw------- 1 boincer boincer      1048 Jun  5 15:24 memory_monitor_summary.json
[2025-06-05 15:24:54] -rw------- 1 boincer boincer        95 Jun  5 15:24 pilot_heartbeat.json
[2025-06-05 15:24:54] -rw------- 1 boincer boincer    313625 Jun  5 15:24 log.45006595._057108.job.log.tgz.1
[2025-06-05 15:24:54] -rw------- 1 boincer boincer      7775 Jun  5 15:24 heartbeat.json
[2025-06-05 15:24:54] -rw-r--r-- 1 boincer boincer      8192 Jun  5 15:24 boinc_mmap_file
[2025-06-05 15:24:54] -rw-r--r-- 1 boincer boincer        27 Jun  5 15:24 wrapper_checkpoint.txt
[2025-06-05 15:24:54] -rw------- 1 boincer boincer       745 Jun  5 15:24 pilotlog.txt
[2025-06-05 15:24:54] -rw------- 1 boincer boincer    649623 Jun  5 15:24 log.45006595._057108.job.log.1
[2025-06-05 15:24:54] -rw------- 1 boincer boincer       357 Jun  5 15:24 output.list
[2025-06-05 15:24:54] -rw-r--r-- 1 boincer boincer       620 Jun  5 15:24 runtime_log
[2025-06-05 15:24:54] -rw------- 1 boincer boincer    983040 Jun  5 15:24 result.tar.gz
[2025-06-05 15:24:54] -rw-r--r-- 1 boincer boincer      8655 Jun  5 15:24 runtime_log.err
[2025-06-05 15:24:54] -rw------- 1 boincer boincer       659 Jun  5 15:24 KT6KDmyXTh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm35nKDmvcPsLn.diag
[2025-06-05 15:24:54] -rw-r--r-- 1 boincer boincer     21257 Jun  5 15:24 stderr.txt
[2025-06-05 15:24:54] HITS file was successfully produced:
[2025-06-05 15:24:54] -rw------- 1 boincer boincer 184356114 Jun  5 15:23 shared/HITS.pool.root.1
[2025-06-05 15:24:54]  *** Contents of shared directory: ***
[2025-06-05 15:24:54] total 389372
[2025-06-05 15:24:54] -rw-r--r-- 2 boincer boincer 212812714 Jun  5 13:27 ATLAS.root_0
[2025-06-05 15:24:54] -rw-r--r-- 2 boincer boincer     15095 Jun  5 13:27 start_atlas.sh
[2025-06-05 15:24:54] -rw-r--r-- 2 boincer boincer    541918 Jun  5 13:27 input.tar.gz
[2025-06-05 15:24:54] -rw------- 1 boincer boincer 184356114 Jun  5 15:23 HITS.pool.root.1
[2025-06-05 15:24:54] -rw------- 1 boincer boincer    983040 Jun  5 15:24 result.tar.gz
15:24:56 (18625): run_atlas exited; CPU time 51071.353198
15:24:56 (18625): called boinc_finish(0)

</stderr_txt>
]]>

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