Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:45:21 (581187): wrapper (7.7.26015): starting
14:45:21 (581187): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 14:45:21] Arguments: --nthreads 12
[2025-06-05 14:45:21] Threads: 12
[2025-06-05 14:45:21] Checking for CVMFS
[2025-06-05 14:45:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 14:45:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 14:45:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 14:45:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 14:45:21] 2.12.6.0 665990 25120 434980 146829 1 71 32478572 32935937 10011 16776704 1 86002015 99.639 79413987 33839 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 14:45:21] CVMFS is ok
[2025-06-05 14:45:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 14:45:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 14:45:21] Further information can be found at the LHC@home message board.
[2025-06-05 14:45:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 14:45:21] Checking for apptainer binary...
[2025-06-05 14:45:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 14:45:21] Running /usr/bin/apptainer --version
[2025-06-05 14:45:21] apptainer version 1.4.1-1.el9
[2025-06-05 14:45:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 14:45:21] c6-6-39-1.aglt2.org
[2025-06-05 14:45:21] apptainer works
[2025-06-05 14:45:21] Set ATHENA_PROC_NUMBER=12
[2025-06-05 14:45:21] Set ATHENA_CORE_NUMBER=12
[2025-06-05 14:45:21] Starting ATLAS job with PandaID=6669907624
[2025-06-05 14:45:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 16:17:08]  *** The last 200 lines of the pilot log: ***
[2025-06-05 16:17:08]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 16:17:08]  is_altstaged=None
[2025-06-05 16:17:08]  is_tar=False
[2025-06-05 16:17:08]  lfn=log.44871837._098272.job.log.tgz.1
[2025-06-05 16:17:08]  mtime=0
[2025-06-05 16:17:08]  protocol_id=None
[2025-06-05 16:17:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 16:17:08]  replicas=None
[2025-06-05 16:17:08]  scope=mc23_13p6TeV
[2025-06-05 16:17:08]  status=None
[2025-06-05 16:17:08]  status_code=0
[2025-06-05 16:17:08]  storage_token=
[2025-06-05 16:17:08]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6669907624/log.44871837._098272.job.log.tgz.1
[2025-06-05 16:17:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/de/log.44871837._098272.job.log.tgz.1
[2025-06-05 16:17:08]  workdir=None
[2025-06-05 16:17:08] ]
[2025-06-05 16:17:08] 2025-06-05 20:16:39,955 | INFO     | transferring file log.44871837._098272.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6669907624/log.44871837._098272.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 16:17:08] 2025-06-05 20:16:39,955 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6669907624/log.44871837._098272.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._098272.job
[2025-06-05 16:17:08] 2025-06-05 20:16:39,973 | INFO     | adding to output.list: log.44871837._098272.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/de/log.44871837._098272.job.log.tg
[2025-06-05 16:17:08] 2025-06-05 20:16:39,974 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 16:17:08] 2025-06-05 20:16:39,974 | INFO     | summary of transferred files:
[2025-06-05 16:17:08] 2025-06-05 20:16:39,974 | INFO     |  -- lfn=log.44871837._098272.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 16:17:08] 2025-06-05 20:16:39,974 | INFO     | stage-out finished correctly
[2025-06-05 16:17:08] 2025-06-05 20:16:41,781 | INFO     | monitor loop #403: job 0:6669907624 is in state 'finished'
[2025-06-05 16:17:08] 2025-06-05 20:16:41,781 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 16:17:08] 2025-06-05 20:16:43,155 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 16:17:08] 2025-06-05 20:16:44,284 | INFO     | monitor loop #404: job 0:6669907624 is in state 'finished'
[2025-06-05 16:17:08] 2025-06-05 20:16:44,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 16:17:08] 2025-06-05 20:16:45,307 | INFO     | job 6669907624 has state=finished
[2025-06-05 16:17:08] 2025-06-05 20:16:45,307 | INFO     | preparing for final server update for job 6669907624 in state='finished'
[2025-06-05 16:17:08] 2025-06-05 20:16:45,308 | INFO     | this job has now completed (state=finished)
[2025-06-05 16:17:08] 2025-06-05 20:16:45,308 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 16:17:08] 2025-06-05 20:16:45,308 | INFO     | log transfer has been attempted: DONE
[2025-06-05 16:17:08] 2025-06-05 20:16:45,308 | INFO     | job 6669907624 has finished - writing final server update
[2025-06-05 16:17:08] 2025-06-05 20:16:45,308 | INFO     | total number of processed events: 400 (read)
[2025-06-05 16:17:08] 2025-06-05 20:16:45,323 | INFO     | executing command: lscpu
[2025-06-05 16:17:08] 2025-06-05 20:16:45,385 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 16:17:08] 2025-06-05 20:16:46,787 | INFO     | monitor loop #405: job 0:6669907624 is in state 'finished'
[2025-06-05 16:17:08] 2025-06-05 20:16:46,787 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 16:17:08] 2025-06-05 20:16:48,929 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 16:17:08] 2025-06-05 20:16:48,929 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669907624/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 16:17:08] 2025-06-05 20:16:48,930 | INFO     | extracted standard info from prmon json
[2025-06-05 16:17:08] 2025-06-05 20:16:48,930 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 16:17:08] 2025-06-05 20:16:48,930 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 16:17:08] 2025-06-05 20:16:48,930 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 16:17:08] 2025-06-05 20:16:48,930 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 16:17:08] 2025-06-05 20:16:48,931 | INFO     | fitting pss+swap vs Time
[2025-06-05 16:17:08] 2025-06-05 20:16:48,932 | INFO     | sum of square deviations: 177279303.566265
[2025-06-05 16:17:08] 2025-06-05 20:16:48,932 | INFO     | sum of deviations: -11418435417.409641
[2025-06-05 16:17:08] 2025-06-05 20:16:48,932 | INFO     | mean x: 1749151965.0722892
[2025-06-05 16:17:08] 2025-06-05 20:16:48,932 | INFO     | mean y: 2498674.734939759
[2025-06-05 16:17:08] 2025-06-05 20:16:48,932 | INFO     | -- intersect: 112664148098.16905
[2025-06-05 16:17:08] 2025-06-05 20:16:48,932 | INFO     | intersect: 112664148098.16905
[2025-06-05 16:17:08] 2025-06-05 20:16:48,932 | INFO     | chi2: 0.20572607615730745
[2025-06-05 16:17:08] 2025-06-05 20:16:48,932 | INFO     | -- intersect: 112664148098.16905
[2025-06-05 16:17:08] 2025-06-05 20:16:48,932 | INFO     | current memory leak: -64.41 B/s (using 83 data points, chi2=0.21)
[2025-06-05 16:17:08] 2025-06-05 20:16:48,933 | INFO     | ..............................
[2025-06-05 16:17:08] 2025-06-05 20:16:48,933 | INFO     | . Timing measurements:
[2025-06-05 16:17:08] 2025-06-05 20:16:48,933 | INFO     | . get job = 0 s
[2025-06-05 16:17:08] 2025-06-05 20:16:48,933 | INFO     | . initial setup = 2 s
[2025-06-05 16:17:08] 2025-06-05 20:16:48,933 | INFO     | . payload setup = 6 s
[2025-06-05 16:17:08] 2025-06-05 20:16:48,933 | INFO     | . stage-in = 0 s
[2025-06-05 16:17:08] 2025-06-05 20:16:48,933 | INFO     | . payload execution = 5441 s
[2025-06-05 16:17:08] 2025-06-05 20:16:48,933 | INFO     | . stage-out = 1 s
[2025-06-05 16:17:08] 2025-06-05 20:16:48,933 | INFO     | . log creation = 0 s
[2025-06-05 16:17:08] 2025-06-05 20:16:48,933 | INFO     | ..............................
[2025-06-05 16:17:08] 2025-06-05 20:16:49,348 | INFO     | 
[2025-06-05 16:17:08] 2025-06-05 20:16:49,348 | INFO     | job summary report
[2025-06-05 16:17:08] 2025-06-05 20:16:49,348 | INFO     | --------------------------------------------------
[2025-06-05 16:17:08] 2025-06-05 20:16:49,348 | INFO     | PanDA job id: 6669907624
[2025-06-05 16:17:08] 2025-06-05 20:16:49,349 | INFO     | task id: 44871837
[2025-06-05 16:17:08] 2025-06-05 20:16:49,349 | INFO     | errors: (none)
[2025-06-05 16:17:08] 2025-06-05 20:16:49,349 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 16:17:08] 2025-06-05 20:16:49,349 | INFO     | pilot state: finished 
[2025-06-05 16:17:08] 2025-06-05 20:16:49,349 | INFO     | transexitcode: 0
[2025-06-05 16:17:08] 2025-06-05 20:16:49,349 | INFO     | exeerrorcode: 0
[2025-06-05 16:17:08] 2025-06-05 20:16:49,349 | INFO     | exeerrordiag: 
[2025-06-05 16:17:08] 2025-06-05 20:16:49,349 | INFO     | exitcode: 0
[2025-06-05 16:17:08] 2025-06-05 20:16:49,349 | INFO     | exitmsg: OK
[2025-06-05 16:17:08] 2025-06-05 20:16:49,349 | INFO     | cpuconsumptiontime: 48676 s
[2025-06-05 16:17:08] 2025-06-05 20:16:49,349 | INFO     | nevents: 400
[2025-06-05 16:17:08] 2025-06-05 20:16:49,349 | INFO     | neventsw: 0
[2025-06-05 16:17:08] 2025-06-05 20:16:49,349 | INFO     | pid: 591131
[2025-06-05 16:17:08] 2025-06-05 20:16:49,349 | INFO     | pgrp: 591131
[2025-06-05 16:17:08] 2025-06-05 20:16:49,349 | INFO     | corecount: 12
[2025-06-05 16:17:08] 2025-06-05 20:16:49,349 | INFO     | event service: False
[2025-06-05 16:17:08] 2025-06-05 20:16:49,349 | INFO     | sizes: {0: 2397171, 1: 2397370, 5: 2397576, 12: 2397632, 5451: 2424132, 5452: 2424131, 5453: 2433256, 5456: 2433312, 5462: 2433482}
[2025-06-05 16:17:08] 2025-06-05 20:16:49,350 | INFO     | --------------------------------------------------
[2025-06-05 16:17:08] 2025-06-05 20:16:49,350 | INFO     | 
[2025-06-05 16:17:08] 2025-06-05 20:16:49,350 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 16:17:08] 2025-06-05 20:16:49,368 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 16:17:08] 2025-06-05 20:16:49,368 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 16:17:08] 2025-06-05 20:16:49,368 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 16:17:08] 2025-06-05 20:16:49,368 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 16:17:08] 2025-06-05 20:16:49,368 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 16:17:08] 2025-06-05 20:16:49,368 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 16:17:08] 2025-06-05 20:16:49,368 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 16:17:08] 2025-06-05 20:16:49,368 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 16:17:08] 2025-06-05 20:16:49,369 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 16:17:08] 2025-06-05 20:16:49,369 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 16:17:08] 2025-06-05 20:16:49,369 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 16:17:08] 2025-06-05 20:16:49,369 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 16:17:08] 2025-06-05 20:16:49,369 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 16:17:08] 2025-06-05 20:16:49,369 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 16:17:08] 2025-06-05 20:16:49,369 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 16:17:08] 2025-06-05 20:16:49,369 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 16:17:08] 2025-06-05 20:16:49,369 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 16:17:08] 2025-06-05 20:16:49,369 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 16:17:08] 2025-06-05 20:16:49,369 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 16:17:08] 2025-06-05 20:16:49,369 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 16:17:08] 2025-06-05 20:16:49,369 | INFO     | job 6669907624 has completed (purged errors)
[2025-06-05 16:17:08] 2025-06-05 20:16:49,370 | INFO     | overall cleanup function is called
[2025-06-05 16:17:08] 2025-06-05 20:16:50,377 | INFO     | --- collectZombieJob: --- 10, [591131]
[2025-06-05 16:17:08] 2025-06-05 20:16:50,378 | INFO     | zombie collector waiting for pid 591131
[2025-06-05 16:17:08] 2025-06-05 20:16:50,378 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 16:17:08] 2025-06-05 20:16:50,378 | INFO     | collected zombie processes
[2025-06-05 16:17:08] 2025-06-05 20:16:50,378 | INFO     | will attempt to kill all subprocesses of pid=591131
[2025-06-05 16:17:08] 2025-06-05 20:16:50,610 | INFO     | process IDs to be killed: [591131] (in reverse order)
[2025-06-05 16:17:08] 2025-06-05 20:16:50,685 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 16:17:08] 2025-06-05 20:16:50,686 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 16:17:08] 2025-06-05 20:16:50,694 | INFO     | did not find any defunct processes belonging to 591131
[2025-06-05 16:17:08] 2025-06-05 20:16:50,702 | INFO     | did not find any defunct processes belonging to 591131
[2025-06-05 16:17:08] 2025-06-05 20:16:50,703 | INFO     | ready for new job
[2025-06-05 16:17:08] 2025-06-05 20:16:50,703 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 16:17:08] 2025-06-05 20:16:50,705 | INFO     | **************************************
[2025-06-05 16:17:08] 2025-06-05 20:16:50,706 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 16:17:08] 2025-06-05 20:16:50,706 | INFO     | **************************************
[2025-06-05 16:17:08] 2025-06-05 20:16:50,706 | INFO     | 
[2025-06-05 16:17:08] 2025-06-05 20:16:50,722 | INFO     | architecture information:
[2025-06-05 16:17:08] 2025-06-05 20:16:50,722 | INFO     | executing command: cat /etc/os-release
[2025-06-05 16:17:08] 2025-06-05 20:16:50,734 | INFO     | cat /etc/os-release:
[2025-06-05 16:17:08] NAME="CentOS Linux"
[2025-06-05 16:17:08] VERSION="7 (Core)"
[2025-06-05 16:17:08] ID="centos"
[2025-06-05 16:17:08] ID_LIKE="rhel fedora"
[2025-06-05 16:17:08] VERSION_ID="7"
[2025-06-05 16:17:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 16:17:08] ANSI_COLOR="0;31"
[2025-06-05 16:17:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 16:17:08] HOME_URL="https://www.centos.org/"
[2025-06-05 16:17:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 16:17:08] 
[2025-06-05 16:17:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 16:17:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 16:17:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 16:17:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 16:17:08] 
[2025-06-05 16:17:08] 2025-06-05 20:16:50,734 | INFO     | **************************************
[2025-06-05 16:17:08] 2025-06-05 20:16:51,237 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 16:17:08] 2025-06-05 20:16:51,252 | INFO     | sufficient remaining disk space (76551290880 B)
[2025-06-05 16:17:08] 2025-06-05 20:16:51,252 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 16:17:08] 2025-06-05 20:16:51,252 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 16:17:08] 2025-06-05 20:16:51,253 | INFO     | update_server=False
[2025-06-05 16:17:08] 2025-06-05 20:16:51,253 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 16:17:08] 2025-06-05 20:16:51,253 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 16:17:08] 2025-06-05 20:16:51,253 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:17:08] 2025-06-05 20:16:51,253 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 16:17:08] 2025-06-05 20:16:51,254 | INFO     | aborting loop
[2025-06-05 16:17:08] 2025-06-05 20:16:51,254 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 16:17:08] 2025-06-05 20:16:51,254 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 16:17:08] 2025-06-05 20:16:51,254 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 16:17:08] 2025-06-05 20:16:51,687 | INFO     | all data control threads have been joined
[2025-06-05 16:17:08] 2025-06-05 20:16:52,257 | INFO     | [job] retrieve thread has finished
[2025-06-05 16:17:08] 2025-06-05 20:16:52,259 | INFO     | [job] job monitor thread has finished
[2025-06-05 16:17:08] 2025-06-05 20:16:52,351 | INFO     | [payload] failed_post thread has finished
[2025-06-05 16:17:08] 2025-06-05 20:16:52,424 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 16:17:08] 2025-06-05 20:16:52,430 | INFO     | [payload] validate_post thread has finished
[2025-06-05 16:17:08] 2025-06-05 20:16:52,508 | INFO     | all job control threads have been joined
[2025-06-05 16:17:08] 2025-06-05 20:16:52,693 | INFO     | [data] control thread has finished
[2025-06-05 16:17:08] 2025-06-05 20:16:52,703 | INFO     | all payload control threads have been joined
[2025-06-05 16:17:08] 2025-06-05 20:16:53,048 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 16:17:08] 2025-06-05 20:16:53,259 | INFO     | [data] copytool_out thread has finished
[2025-06-05 16:17:08] 2025-06-05 20:16:53,400 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 16:17:08] 2025-06-05 20:16:53,472 | INFO     | [data] copytool_in thread has finished
[2025-06-05 16:17:08] 2025-06-05 20:16:53,513 | INFO     | [job] control thread has finished
[2025-06-05 16:17:08] 2025-06-05 20:16:53,708 | INFO     | [payload] control thread has finished
[2025-06-05 16:17:08] 2025-06-05 20:16:53,721 | INFO     | [job] validate thread has finished
[2025-06-05 16:17:08] 2025-06-05 20:16:53,739 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 16:17:08] 2025-06-05 20:16:53,996 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:17:08] 2025-06-05 20:16:55,001 | INFO     | [job] queue monitor thread has finished
[2025-06-05 16:17:08] 2025-06-05 20:16:57,745 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 16:17:08] 2025-06-05 20:17:01,374 | INFO     | job.realtimelogging is not enabled
[2025-06-05 16:17:08] 2025-06-05 20:17:02,380 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 16:17:08] 2025-06-05 20:17:03,442 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140192985622336)>', '<ExcThread(monitor, started 140192713250560)>']
[2025-06-05 16:17:08] 2025-06-05 20:17:04,320 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 16:17:08] 2025-06-05 20:17:04,320 | INFO     | [monitor] control thread has ended
[2025-06-05 16:17:08] 2025-06-05 20:17:08,468 | INFO     | all workflow threads have been joined
[2025-06-05 16:17:08] 2025-06-05 20:17:08,468 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 16:17:08] 2025-06-05 20:17:08,469 | INFO     | traces error code: 0
[2025-06-05 16:17:08] 2025-06-05 20:17:08,469 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 16:17:08] 2025-06-05 20:17:08,669 [wrapper] ==== pilot stdout END ====
[2025-06-05 16:17:08] 2025-06-05 20:17:08,672 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 16:17:08] 2025-06-05 20:17:08,674 [wrapper] pilotpid: 584753
[2025-06-05 16:17:08] 2025-06-05 20:17:08,678 [wrapper] Pilot exit status: 0
[2025-06-05 16:17:08] 2025-06-05 20:17:08,690 [wrapper] pandaids: 6669907624
[2025-06-05 16:17:08] 2025-06-05 20:17:08,749 [wrapper] cleanup supervisor_pilot  789556 584754
[2025-06-05 16:17:08] 2025-06-05 20:17:08,752 [wrapper] Test setup, not cleaning
[2025-06-05 16:17:08] 2025-06-05 20:17:08,756 [wrapper] apfmon messages muted
[2025-06-05 16:17:08] 2025-06-05 20:17:08,758 [wrapper] ==== wrapper stdout END ====
[2025-06-05 16:17:08] 2025-06-05 20:17:08,761 [wrapper] ==== wrapper stderr END ====
[2025-06-05 16:17:08]  *** Error codes and diagnostics ***
[2025-06-05 16:17:08]     "exeErrorCode": 0,
[2025-06-05 16:17:08]     "exeErrorDiag": "",
[2025-06-05 16:17:08]     "pilotErrorCode": 0,
[2025-06-05 16:17:08]     "pilotErrorDiag": "",
[2025-06-05 16:17:08]  *** Listing of results directory ***
[2025-06-05 16:17:08] total 417340
[2025-06-05 16:17:08] -rw-r--r--. 1 boincer umatlas    495897 May 29 05:21 pilot3.tar.gz
[2025-06-05 16:17:08] -rw-r--r--. 1 boincer umatlas      5111 May 29 05:25 queuedata.json
[2025-06-05 16:17:08] -rwx------. 1 boincer umatlas     37140 May 29 05:27 runpilot2-wrapper.sh
[2025-06-05 16:17:08] -rw-r--r--. 1 boincer umatlas       100 Jun  5 14:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 16:17:08] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 14:45 run_atlas
[2025-06-05 16:17:08] -rw-r--r--. 1 boincer umatlas       105 Jun  5 14:45 job.xml
[2025-06-05 16:17:08] -rw-r--r--. 2 boincer umatlas 224896767 Jun  5 14:45 EVNT.44871834._002192.pool.root.1
[2025-06-05 16:17:08] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 14:45 start_atlas.sh
[2025-06-05 16:17:08] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 14:45 shared
[2025-06-05 16:17:08] -rw-r--r--. 2 boincer umatlas    508882 Jun  5 14:45 input.tar.gz
[2025-06-05 16:17:08] -rw-r--r--. 1 boincer umatlas         0 Jun  5 14:45 boinc_lockfile
[2025-06-05 16:17:08] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 14:45 pandaJob.out
[2025-06-05 16:17:08] -rw-------. 1 boincer umatlas    987543 Jun  5 14:45 agis_schedconf.cvmfs.json
[2025-06-05 16:17:08] -rw-------. 1 boincer umatlas   1598969 Jun  5 14:45 agis_ddmendpoints.agis.ALL.json
[2025-06-05 16:17:08] drwx------. 4 boincer umatlas      4096 Jun  5 14:45 pilot3
[2025-06-05 16:17:08] -rw-r--r--. 1 boincer umatlas      6842 Jun  5 16:10 init_data.xml
[2025-06-05 16:17:08] -rw-------. 1 boincer umatlas 196802523 Jun  5 16:16 HITS.44871837._098272.pool.root.1
[2025-06-05 16:17:08] -rw-------. 1 boincer umatlas        95 Jun  5 16:16 pilot_heartbeat.json
[2025-06-05 16:17:08] -rw-r--r--. 1 boincer umatlas       529 Jun  5 16:16 boinc_task_state.xml
[2025-06-05 16:17:08] -rw-------. 1 boincer umatlas      1041 Jun  5 16:16 memory_monitor_summary.json
[2025-06-05 16:17:08] -rw-------. 1 boincer umatlas    377680 Jun  5 16:16 log.44871837._098272.job.log.tgz.1
[2025-06-05 16:17:08] -rw-r--r--. 1 boincer umatlas        27 Jun  5 16:16 wrapper_checkpoint.txt
[2025-06-05 16:17:08] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 16:16 boinc_mmap_file
[2025-06-05 16:17:08] -rw-------. 1 boincer umatlas      7722 Jun  5 16:16 heartbeat.json
[2025-06-05 16:17:08] -rw-------. 1 boincer umatlas      4548 Jun  5 16:17 pilotlog.txt
[2025-06-05 16:17:08] -rw-------. 1 boincer umatlas    530392 Jun  5 16:17 log.44871837._098272.job.log.1
[2025-06-05 16:17:08] -rw-------. 1 boincer umatlas       357 Jun  5 16:17 output.list
[2025-06-05 16:17:08] -rw-r--r--. 1 boincer umatlas       620 Jun  5 16:17 runtime_log
[2025-06-05 16:17:08] -rw-------. 1 boincer umatlas    931840 Jun  5 16:17 result.tar.gz
[2025-06-05 16:17:08] -rw-r--r--. 1 boincer umatlas      8666 Jun  5 16:17 runtime_log.err
[2025-06-05 16:17:08] -rw-------. 1 boincer umatlas       654 Jun  5 16:17 McUKDmwioe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcGeKDmxe95Ko.diag
[2025-06-05 16:17:08] -rw-r--r--. 1 boincer umatlas     21400 Jun  5 16:17 stderr.txt
[2025-06-05 16:17:08] HITS file was successfully produced:
[2025-06-05 16:17:08] -rw-------. 1 boincer umatlas 196802523 Jun  5 16:16 shared/HITS.pool.root.1
[2025-06-05 16:17:08]  *** Contents of shared directory: ***
[2025-06-05 16:17:08] total 413252
[2025-06-05 16:17:08] -rw-r--r--. 2 boincer umatlas 224896767 Jun  5 14:45 ATLAS.root_0
[2025-06-05 16:17:08] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 14:45 start_atlas.sh
[2025-06-05 16:17:08] -rw-r--r--. 2 boincer umatlas    508882 Jun  5 14:45 input.tar.gz
[2025-06-05 16:17:08] -rw-------. 1 boincer umatlas 196802523 Jun  5 16:16 HITS.pool.root.1
[2025-06-05 16:17:08] -rw-------. 1 boincer umatlas    931840 Jun  5 16:17 result.tar.gz
16:17:10 (581187): run_atlas exited; CPU time 48724.357932
16:17:10 (581187): called boinc_finish(0)

</stderr_txt>
]]>

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