Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:19:17 (3191804): wrapper (7.7.26015): starting
13:19:17 (3191804): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 13:19:17] Arguments: --nthreads 8
[2025-06-05 13:19:17] Threads: 8
[2025-06-05 13:19:17] Checking for CVMFS
[2025-06-05 13:19:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 13:19:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 13:19:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 13:19:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 13:19:17] 2.12.6.0 9255 33231 596296 146827 1 26 20447249 32947200 17602 16776704 1 175209597 99.670 146181949 26994 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 13:19:17] CVMFS is ok
[2025-06-05 13:19:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 13:19:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 13:19:17] Further information can be found at the LHC@home message board.
[2025-06-05 13:19:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 13:19:17] Checking for apptainer binary...
[2025-06-05 13:19:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 13:19:17] Running /usr/bin/apptainer --version
[2025-06-05 13:19:17] apptainer version 1.4.1-1.el9
[2025-06-05 13:19:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:19:17] c6-6-8-1.aglt2.org
[2025-06-05 13:19:17] apptainer works
[2025-06-05 13:19:17] Set ATHENA_PROC_NUMBER=8
[2025-06-05 13:19:17] Set ATHENA_CORE_NUMBER=8
[2025-06-05 13:19:17] Starting ATLAS job with PandaID=6668946692
[2025-06-05 13:19:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 15:57:43]  *** The last 200 lines of the pilot log: ***
[2025-06-05 15:57:43] 2025-06-05 19:57:22,037 | WARNING  | process 3214599 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 15:57:43] 2025-06-05 19:57:22,038 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668946692/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 15:57:43] 2025-06-05 19:57:22,318 | INFO     | number of running child processes to parent process 3214599: 1
[2025-06-05 15:57:43] 2025-06-05 19:57:22,318 | INFO     | maximum number of monitored processes: 6
[2025-06-05 15:57:43] 2025-06-05 19:57:22,379 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 15:57:43] 2025-06-05 19:57:22,380 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668946692/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 15:57:43] 2025-06-05 19:57:22,380 | INFO     | extracted standard info from prmon json
[2025-06-05 15:57:43] 2025-06-05 19:57:22,380 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 15:57:43] 2025-06-05 19:57:22,380 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 15:57:43] 2025-06-05 19:57:22,381 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 15:57:43] 2025-06-05 19:57:22,381 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 15:57:43] 2025-06-05 19:57:22,384 | INFO     | fitting pss+swap vs Time
[2025-06-05 15:57:43] 2025-06-05 19:57:22,384 | INFO     | sum of square deviations: 1154663510.0
[2025-06-05 15:57:43] 2025-06-05 19:57:22,385 | INFO     | sum of deviations: 19222617375.0
[2025-06-05 15:57:43] 2025-06-05 19:57:22,385 | INFO     | mean x: 1749148691.0
[2025-06-05 15:57:43] 2025-06-05 19:57:22,385 | INFO     | mean y: 2173258.793548387
[2025-06-05 15:57:43] 2025-06-05 19:57:22,385 | INFO     | -- intersect: -29117319760.497505
[2025-06-05 15:57:43] 2025-06-05 19:57:22,386 | INFO     | intersect: -29117319760.497505
[2025-06-05 15:57:43] 2025-06-05 19:57:22,386 | INFO     | chi2: 1.7022559452611457
[2025-06-05 15:57:43] 2025-06-05 19:57:22,386 | INFO     | sum of square deviations: 1046484737.5
[2025-06-05 15:57:43] 2025-06-05 19:57:22,387 | INFO     | sum of deviations: 20000084060.49997
[2025-06-05 15:57:43] 2025-06-05 19:57:22,387 | INFO     | mean x: 1749148538.5
[2025-06-05 15:57:43] 2025-06-05 19:57:22,387 | INFO     | mean y: 2174315.3533333335
[2025-06-05 15:57:43] 2025-06-05 19:57:22,387 | INFO     | -- intersect: -33426997225.049248
[2025-06-05 15:57:43] 2025-06-05 19:57:22,387 | INFO     | intersect: -33426997225.049248
[2025-06-05 15:57:43] 2025-06-05 19:57:22,388 | INFO     | chi2: 1.6905696674297173
[2025-06-05 15:57:43] 2025-06-05 19:57:22,388 | INFO     | current chi2=1.6905696674297173 (change=0.6865170812862448 %)
[2025-06-05 15:57:43] 2025-06-05 19:57:22,388 | INFO     | right removable region: 149
[2025-06-05 15:57:43] 2025-06-05 19:57:22,388 | INFO     | sum of square deviations: 1046484737.5
[2025-06-05 15:57:43] 2025-06-05 19:57:22,389 | INFO     | sum of deviations: -5234581684.500001
[2025-06-05 15:57:43] 2025-06-05 19:57:22,389 | INFO     | mean x: 1749148843.5
[2025-06-05 15:57:43] 2025-06-05 19:57:22,389 | INFO     | mean y: 2207398.433333333
[2025-06-05 15:57:43] 2025-06-05 19:57:22,389 | INFO     | -- intersect: 8751558603.996862
[2025-06-05 15:57:43] 2025-06-05 19:57:22,389 | INFO     | intersect: 8751558603.996862
[2025-06-05 15:57:43] 2025-06-05 19:57:22,389 | INFO     | chi2: 0.09508320838730752
[2025-06-05 15:57:43] 2025-06-05 19:57:22,389 | INFO     | current chi2=0.09508320838730752 (change=94.41428249071437 %)
[2025-06-05 15:57:43] 2025-06-05 19:57:22,390 | INFO     | sum of square deviations: 945282840.0
[2025-06-05 15:57:43] 2025-06-05 19:57:22,390 | INFO     | sum of deviations: -5628546066.999999
[2025-06-05 15:57:43] 2025-06-05 19:57:22,391 | INFO     | mean x: 1749148996.0
[2025-06-05 15:57:43] 2025-06-05 19:57:22,391 | INFO     | mean y: 2207982.2413793104
[2025-06-05 15:57:43] 2025-06-05 19:57:22,391 | INFO     | -- intersect: 10417255506.041555
[2025-06-05 15:57:43] 2025-06-05 19:57:22,391 | INFO     | intersect: 10417255506.041555
[2025-06-05 15:57:43] 2025-06-05 19:57:22,391 | INFO     | chi2: 0.09010417211807578
[2025-06-05 15:57:43] 2025-06-05 19:57:22,391 | INFO     | current chi2=0.09010417211807578 (change=5.236504272079635 %)
[2025-06-05 15:57:43] 2025-06-05 19:57:22,391 | INFO     | left removable region: 20
[2025-06-05 15:57:43] 2025-06-05 19:57:22,391 | INFO     | sum of square deviations: 665612480.0
[2025-06-05 15:57:43] 2025-06-05 19:57:22,392 | INFO     | sum of deviations: -2749066016.0000005
[2025-06-05 15:57:43] 2025-06-05 19:57:22,392 | INFO     | mean x: 1749149118.0
[2025-06-05 15:57:43] 2025-06-05 19:57:22,392 | INFO     | mean y: 2206991.2325581396
[2025-06-05 15:57:43] 2025-06-05 19:57:22,392 | INFO     | -- intersect: 7226420090.737806
[2025-06-05 15:57:43] 2025-06-05 19:57:22,392 | INFO     | intersect: 7226420090.737806
[2025-06-05 15:57:43] 2025-06-05 19:57:22,393 | INFO     | chi2: 0.07321300064030864
[2025-06-05 15:57:43] 2025-06-05 19:57:22,393 | INFO     | -- intersect: 7226420090.737806
[2025-06-05 15:57:43] 2025-06-05 19:57:22,393 | INFO     | current memory leak: -4.13 B/s (using 129 data points, chi2=0.07)
[2025-06-05 15:57:43] 2025-06-05 19:57:22,394 | INFO     | ..............................
[2025-06-05 15:57:43] 2025-06-05 19:57:22,394 | INFO     | . Timing measurements:
[2025-06-05 15:57:43] 2025-06-05 19:57:22,394 | INFO     | . get job = 0 s
[2025-06-05 15:57:43] 2025-06-05 19:57:22,394 | INFO     | . initial setup = 3 s
[2025-06-05 15:57:43] 2025-06-05 19:57:22,394 | INFO     | . payload setup = 6 s
[2025-06-05 15:57:43] 2025-06-05 19:57:22,394 | INFO     | . stage-in = 0 s
[2025-06-05 15:57:43] 2025-06-05 19:57:22,394 | INFO     | . payload execution = 9443 s
[2025-06-05 15:57:43] 2025-06-05 19:57:22,394 | INFO     | . stage-out = 0 s
[2025-06-05 15:57:43] 2025-06-05 19:57:22,395 | INFO     | . log creation = 0 s
[2025-06-05 15:57:43] 2025-06-05 19:57:22,395 | INFO     | ..............................
[2025-06-05 15:57:43] 2025-06-05 19:57:22,498 | INFO     | 
[2025-06-05 15:57:43] 2025-06-05 19:57:22,498 | INFO     | job summary report
[2025-06-05 15:57:43] 2025-06-05 19:57:22,498 | INFO     | --------------------------------------------------
[2025-06-05 15:57:43] 2025-06-05 19:57:22,498 | INFO     | PanDA job id: 6668946692
[2025-06-05 15:57:43] 2025-06-05 19:57:22,499 | INFO     | task id: 44871837
[2025-06-05 15:57:43] 2025-06-05 19:57:22,499 | INFO     | errors: (none)
[2025-06-05 15:57:43] 2025-06-05 19:57:22,499 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 15:57:43] 2025-06-05 19:57:22,499 | INFO     | pilot state: finished 
[2025-06-05 15:57:43] 2025-06-05 19:57:22,499 | INFO     | transexitcode: 0
[2025-06-05 15:57:43] 2025-06-05 19:57:22,499 | INFO     | exeerrorcode: 0
[2025-06-05 15:57:43] 2025-06-05 19:57:22,499 | INFO     | exeerrordiag: 
[2025-06-05 15:57:43] 2025-06-05 19:57:22,499 | INFO     | exitcode: 0
[2025-06-05 15:57:43] 2025-06-05 19:57:22,499 | INFO     | exitmsg: OK
[2025-06-05 15:57:43] 2025-06-05 19:57:22,499 | INFO     | cpuconsumptiontime: 52721 s
[2025-06-05 15:57:43] 2025-06-05 19:57:22,499 | INFO     | nevents: 400
[2025-06-05 15:57:43] 2025-06-05 19:57:22,499 | INFO     | neventsw: 0
[2025-06-05 15:57:43] 2025-06-05 19:57:22,499 | INFO     | pid: 3214599
[2025-06-05 15:57:43] 2025-06-05 19:57:22,499 | INFO     | pgrp: 3214599
[2025-06-05 15:57:43] 2025-06-05 19:57:22,499 | INFO     | corecount: 8
[2025-06-05 15:57:43] 2025-06-05 19:57:22,500 | INFO     | event service: False
[2025-06-05 15:57:43] 2025-06-05 19:57:22,500 | INFO     | sizes: {0: 2397221, 1: 2397420, 5: 2397626, 12: 2397682, 9453: 2426081, 9454: 2435206, 9459: 2435320}
[2025-06-05 15:57:43] 2025-06-05 19:57:22,500 | INFO     | --------------------------------------------------
[2025-06-05 15:57:43] 2025-06-05 19:57:22,500 | INFO     | 
[2025-06-05 15:57:43] 2025-06-05 19:57:22,500 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 15:57:43] 2025-06-05 19:57:22,518 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 15:57:43] 2025-06-05 19:57:22,518 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 15:57:43] 2025-06-05 19:57:22,518 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 15:57:43] 2025-06-05 19:57:22,518 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 15:57:43] 2025-06-05 19:57:22,518 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 15:57:43] 2025-06-05 19:57:22,518 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 15:57:43] 2025-06-05 19:57:22,519 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 15:57:43] 2025-06-05 19:57:22,519 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 15:57:43] 2025-06-05 19:57:22,519 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 15:57:43] 2025-06-05 19:57:22,519 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 15:57:43] 2025-06-05 19:57:22,519 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 15:57:43] 2025-06-05 19:57:22,519 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 15:57:43] 2025-06-05 19:57:22,519 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 15:57:43] 2025-06-05 19:57:22,519 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 15:57:43] 2025-06-05 19:57:22,519 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 15:57:43] 2025-06-05 19:57:22,519 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 15:57:43] 2025-06-05 19:57:22,519 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 15:57:43] 2025-06-05 19:57:22,519 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 15:57:43] 2025-06-05 19:57:22,519 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 15:57:43] 2025-06-05 19:57:22,519 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 15:57:43] 2025-06-05 19:57:22,520 | INFO     | job 6668946692 has completed (purged errors)
[2025-06-05 15:57:43] 2025-06-05 19:57:22,520 | INFO     | overall cleanup function is called
[2025-06-05 15:57:43] 2025-06-05 19:57:23,527 | INFO     | --- collectZombieJob: --- 10, [3214599]
[2025-06-05 15:57:43] 2025-06-05 19:57:23,527 | INFO     | zombie collector waiting for pid 3214599
[2025-06-05 15:57:43] 2025-06-05 19:57:23,527 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 15:57:43] 2025-06-05 19:57:23,527 | INFO     | collected zombie processes
[2025-06-05 15:57:43] 2025-06-05 19:57:23,527 | INFO     | will attempt to kill all subprocesses of pid=3214599
[2025-06-05 15:57:43] 2025-06-05 19:57:23,792 | INFO     | process IDs to be killed: [3214599] (in reverse order)
[2025-06-05 15:57:43] 2025-06-05 19:57:23,886 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 15:57:43] 2025-06-05 19:57:23,886 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 15:57:43] 2025-06-05 19:57:23,898 | INFO     | did not find any defunct processes belonging to 3214599
[2025-06-05 15:57:43] 2025-06-05 19:57:23,909 | INFO     | did not find any defunct processes belonging to 3214599
[2025-06-05 15:57:43] 2025-06-05 19:57:23,909 | INFO     | ready for new job
[2025-06-05 15:57:43] 2025-06-05 19:57:23,909 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 15:57:43] 2025-06-05 19:57:23,911 | INFO     | **************************************
[2025-06-05 15:57:43] 2025-06-05 19:57:23,911 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 15:57:43] 2025-06-05 19:57:23,911 | INFO     | **************************************
[2025-06-05 15:57:43] 2025-06-05 19:57:23,911 | INFO     | 
[2025-06-05 15:57:43] 2025-06-05 19:57:23,928 | INFO     | architecture information:
[2025-06-05 15:57:43] 2025-06-05 19:57:23,929 | INFO     | executing command: cat /etc/os-release
[2025-06-05 15:57:43] 2025-06-05 19:57:23,943 | INFO     | cat /etc/os-release:
[2025-06-05 15:57:43] NAME="CentOS Linux"
[2025-06-05 15:57:43] VERSION="7 (Core)"
[2025-06-05 15:57:43] ID="centos"
[2025-06-05 15:57:43] ID_LIKE="rhel fedora"
[2025-06-05 15:57:43] VERSION_ID="7"
[2025-06-05 15:57:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 15:57:43] ANSI_COLOR="0;31"
[2025-06-05 15:57:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 15:57:43] HOME_URL="https://www.centos.org/"
[2025-06-05 15:57:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 15:57:43] 
[2025-06-05 15:57:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 15:57:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 15:57:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 15:57:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 15:57:43] 
[2025-06-05 15:57:43] 2025-06-05 19:57:23,943 | INFO     | **************************************
[2025-06-05 15:57:43] 2025-06-05 19:57:24,446 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 15:57:43] 2025-06-05 19:57:24,464 | INFO     | sufficient remaining disk space (76548145152 B)
[2025-06-05 15:57:43] 2025-06-05 19:57:24,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 15:57:43] 2025-06-05 19:57:24,464 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 15:57:43] 2025-06-05 19:57:24,464 | INFO     | update_server=False
[2025-06-05 15:57:43] 2025-06-05 19:57:24,464 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 15:57:43] 2025-06-05 19:57:24,464 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 15:57:43] 2025-06-05 19:57:24,465 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 15:57:43] 2025-06-05 19:57:24,465 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 15:57:43] 2025-06-05 19:57:24,465 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 15:57:43] 2025-06-05 19:57:24,465 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:57:43] 2025-06-05 19:57:24,467 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 15:57:43] 2025-06-05 19:57:24,609 | INFO     | all job control threads have been joined
[2025-06-05 15:57:43] 2025-06-05 19:57:24,714 | INFO     | all payload control threads have been joined
[2025-06-05 15:57:43] 2025-06-05 19:57:24,822 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 15:57:43] 2025-06-05 19:57:24,822 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 15:57:43] 2025-06-05 19:57:24,822 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:57:43] 2025-06-05 19:57:24,822 | INFO     | will abort loop
[2025-06-05 15:57:43] 2025-06-05 19:57:25,401 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 15:57:43] 2025-06-05 19:57:25,469 | INFO     | [job] retrieve thread has finished
[2025-06-05 15:57:43] 2025-06-05 19:57:25,471 | INFO     | [job] queue monitor thread has finished
[2025-06-05 15:57:43] 2025-06-05 19:57:25,524 | INFO     | all data control threads have been joined
[2025-06-05 15:57:43] 2025-06-05 19:57:25,525 | INFO     | [payload] validate_post thread has finished
[2025-06-05 15:57:43] 2025-06-05 19:57:25,615 | INFO     | [job] control thread has finished
[2025-06-05 15:57:43] 2025-06-05 19:57:25,671 | INFO     | [job] validate thread has finished
[2025-06-05 15:57:43] 2025-06-05 19:57:25,719 | INFO     | [payload] control thread has finished
[2025-06-05 15:57:43] 2025-06-05 19:57:25,827 | INFO     | [job] job monitor thread has finished
[2025-06-05 15:57:43] 2025-06-05 19:57:26,068 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 15:57:43] 2025-06-05 19:57:26,233 | INFO     | [payload] failed_post thread has finished
[2025-06-05 15:57:43] 2025-06-05 19:57:26,385 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 15:57:43] 2025-06-05 19:57:26,449 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 15:57:43] 2025-06-05 19:57:26,529 | INFO     | [data] control thread has finished
[2025-06-05 15:57:43] 2025-06-05 19:57:26,662 | INFO     | [data] copytool_in thread has finished
[2025-06-05 15:57:43] 2025-06-05 19:57:27,407 | INFO     | [data] copytool_out thread has finished
[2025-06-05 15:57:43] 2025-06-05 19:57:28,475 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 15:57:43] 2025-06-05 19:57:35,294 | INFO     | job.realtimelogging is not enabled
[2025-06-05 15:57:43] 2025-06-05 19:57:36,299 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 15:57:43] 2025-06-05 19:57:38,189 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140286092375872)>', '<ExcThread(monitor, started 140285199755008)>']
[2025-06-05 15:57:43] 2025-06-05 19:57:38,542 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 15:57:43] 2025-06-05 19:57:38,542 | INFO     | [monitor] control thread has ended
[2025-06-05 15:57:43] 2025-06-05 19:57:43,214 | INFO     | all workflow threads have been joined
[2025-06-05 15:57:43] 2025-06-05 19:57:43,214 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 15:57:43] 2025-06-05 19:57:43,214 | INFO     | traces error code: 0
[2025-06-05 15:57:43] 2025-06-05 19:57:43,214 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 15:57:43] 2025-06-05 19:57:43,351 [wrapper] ==== pilot stdout END ====
[2025-06-05 15:57:43] 2025-06-05 19:57:43,354 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 15:57:43] 2025-06-05 19:57:43,357 [wrapper] pilotpid: 3197377
[2025-06-05 15:57:43] 2025-06-05 19:57:43,359 [wrapper] Pilot exit status: 0
[2025-06-05 15:57:43] 2025-06-05 19:57:43,368 [wrapper] pandaids: 6668946692
[2025-06-05 15:57:43] 2025-06-05 19:57:43,425 [wrapper] cleanup supervisor_pilot 3510741 3197378
[2025-06-05 15:57:43] 2025-06-05 19:57:43,428 [wrapper] Test setup, not cleaning
[2025-06-05 15:57:43] 2025-06-05 19:57:43,431 [wrapper] apfmon messages muted
[2025-06-05 15:57:43] 2025-06-05 19:57:43,433 [wrapper] ==== wrapper stdout END ====
[2025-06-05 15:57:43] 2025-06-05 19:57:43,435 [wrapper] ==== wrapper stderr END ====
[2025-06-05 15:57:43]  *** Error codes and diagnostics ***
[2025-06-05 15:57:43]     "exeErrorCode": 0,
[2025-06-05 15:57:43]     "exeErrorDiag": "",
[2025-06-05 15:57:43]     "pilotErrorCode": 0,
[2025-06-05 15:57:43]     "pilotErrorDiag": "",
[2025-06-05 15:57:43]  *** Listing of results directory ***
[2025-06-05 15:57:43] total 414996
[2025-06-05 15:57:43] -rw-r--r-- 1 boincer umatlas    495897 May 28 17:08 pilot3.tar.gz
[2025-06-05 15:57:43] -rwx------ 1 boincer umatlas     37140 May 28 17:26 runpilot2-wrapper.sh
[2025-06-05 15:57:43] -rw-r--r-- 1 boincer umatlas      5111 May 28 17:26 queuedata.json
[2025-06-05 15:57:43] -rw-r--r-- 1 boincer umatlas       100 Jun  5 13:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 15:57:43] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 13:19 run_atlas
[2025-06-05 15:57:43] -rw-r--r-- 1 boincer umatlas       105 Jun  5 13:19 job.xml
[2025-06-05 15:57:43] -rw-r--r-- 2 boincer umatlas 225189956 Jun  5 13:19 EVNT.44871834._003524.pool.root.1
[2025-06-05 15:57:43] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 13:19 start_atlas.sh
[2025-06-05 15:57:43] drwxrwx--x 2 boincer umatlas      4096 Jun  5 13:19 shared
[2025-06-05 15:57:43] -rw-r--r-- 2 boincer umatlas    508876 Jun  5 13:19 input.tar.gz
[2025-06-05 15:57:43] -rw-r--r-- 1 boincer umatlas         0 Jun  5 13:19 boinc_lockfile
[2025-06-05 15:57:43] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 13:19 pandaJob.out
[2025-06-05 15:57:43] -rw------- 1 boincer umatlas    983229 Jun  5 13:19 agis_schedconf.cvmfs.json
[2025-06-05 15:57:43] -rw------- 1 boincer umatlas   1598969 Jun  5 13:19 agis_ddmendpoints.agis.ALL.json
[2025-06-05 15:57:43] drwx------ 4 boincer umatlas      4096 Jun  5 13:19 pilot3
[2025-06-05 15:57:43] -rw-r--r-- 1 boincer umatlas      6856 Jun  5 15:55 init_data.xml
[2025-06-05 15:57:43] -rw------- 1 boincer umatlas        95 Jun  5 15:56 pilot_heartbeat.json
[2025-06-05 15:57:43] -rw------- 1 boincer umatlas 193497042 Jun  5 15:56 HITS.44871837._090593.pool.root.1
[2025-06-05 15:57:43] -rw-r--r-- 1 boincer umatlas       529 Jun  5 15:56 boinc_task_state.xml
[2025-06-05 15:57:43] -rw------- 1 boincer umatlas      1043 Jun  5 15:57 memory_monitor_summary.json
[2025-06-05 15:57:43] -rw------- 1 boincer umatlas    360076 Jun  5 15:57 log.44871837._090593.job.log.tgz.1
[2025-06-05 15:57:43] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 15:57 boinc_mmap_file
[2025-06-05 15:57:43] -rw-r--r-- 1 boincer umatlas        27 Jun  5 15:57 wrapper_checkpoint.txt
[2025-06-05 15:57:43] -rw------- 1 boincer umatlas      7715 Jun  5 15:57 heartbeat.json
[2025-06-05 15:57:43] -rw------- 1 boincer umatlas      4734 Jun  5 15:57 pilotlog.txt
[2025-06-05 15:57:43] -rw------- 1 boincer umatlas    857790 Jun  5 15:57 log.44871837._090593.job.log.1
[2025-06-05 15:57:43] -rw------- 1 boincer umatlas       357 Jun  5 15:57 output.list
[2025-06-05 15:57:43] -rw-r--r-- 1 boincer umatlas       620 Jun  5 15:57 runtime_log
[2025-06-05 15:57:43] -rw------- 1 boincer umatlas   1239040 Jun  5 15:57 result.tar.gz
[2025-06-05 15:57:43] -rw-r--r-- 1 boincer umatlas      8659 Jun  5 15:57 runtime_log.err
[2025-06-05 15:57:43] -rw------- 1 boincer umatlas       652 Jun  5 15:57 KEPLDmATde7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmv7cKDmMxnS1n.diag
[2025-06-05 15:57:43] -rw-r--r-- 1 boincer umatlas     21056 Jun  5 15:57 stderr.txt
[2025-06-05 15:57:43] HITS file was successfully produced:
[2025-06-05 15:57:43] -rw------- 1 boincer umatlas 193497042 Jun  5 15:56 shared/HITS.pool.root.1
[2025-06-05 15:57:43]  *** Contents of shared directory: ***
[2025-06-05 15:57:43] total 410612
[2025-06-05 15:57:43] -rw-r--r-- 2 boincer umatlas 225189956 Jun  5 13:19 ATLAS.root_0
[2025-06-05 15:57:43] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 13:19 start_atlas.sh
[2025-06-05 15:57:43] -rw-r--r-- 2 boincer umatlas    508876 Jun  5 13:19 input.tar.gz
[2025-06-05 15:57:43] -rw------- 1 boincer umatlas 193497042 Jun  5 15:56 HITS.pool.root.1
[2025-06-05 15:57:43] -rw------- 1 boincer umatlas   1239040 Jun  5 15:57 result.tar.gz
15:57:44 (3191804): run_atlas exited; CPU time 52981.285441
15:57:44 (3191804): called boinc_finish(0)

</stderr_txt>
]]>

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