Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:18:55 (15281): wrapper (7.7.26015): starting
13:18:55 (15281): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 13:18:55] Arguments: --nthreads 12
[2025-06-05 13:18:55] Threads: 12
[2025-06-05 13:18:55] Checking for CVMFS
[2025-06-05 13:18:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 13:18:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 13:18:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 13:18:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 13:18:55] 2.11.2.0 2925 37412 85060 146827 3 1 15704993 20275200 1 130560 0 16222020 99.985 6446301 7695 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 13:18:55] CVMFS is ok
[2025-06-05 13:18:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 13:18:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 13:18:55] Further information can be found at the LHC@home message board.
[2025-06-05 13:18:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 13:18:55] Checking for apptainer binary...
[2025-06-05 13:18:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 13:18:55] Running /usr/bin/apptainer --version
[2025-06-05 13:18:55] apptainer version 1.3.2-1.el7
[2025-06-05 13:18:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:18:57] c-205-10.aglt2.org
[2025-06-05 13:18:57] apptainer works
[2025-06-05 13:18:57] Set ATHENA_PROC_NUMBER=12
[2025-06-05 13:18:57] Set ATHENA_CORE_NUMBER=12
[2025-06-05 13:18:57] Starting ATLAS job with PandaID=6670732850
[2025-06-05 13:18:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 14:52:53]  *** The last 200 lines of the pilot log: ***
[2025-06-05 14:52:53]  mtime=0
[2025-06-05 14:52:53]  protocol_id=None
[2025-06-05 14:52:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 14:52:53]  replicas=None
[2025-06-05 14:52:53]  scope=mc23_13p6TeV
[2025-06-05 14:52:53]  status=None
[2025-06-05 14:52:53]  status_code=0
[2025-06-05 14:52:53]  storage_token=
[2025-06-05 14:52:53]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6670732850/log.44871837._098848.job.log.tgz.1
[2025-06-05 14:52:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/17/log.44871837._098848.job.log.tgz.1
[2025-06-05 14:52:53]  workdir=None
[2025-06-05 14:52:53] ]
[2025-06-05 14:52:53] 2025-06-05 18:52:24,229 | INFO     | transferring file log.44871837._098848.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6670732850/log.44871837._098848.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 14:52:53] 2025-06-05 18:52:24,230 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6670732850/log.44871837._098848.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._098848.job
[2025-06-05 14:52:53] 2025-06-05 18:52:24,252 | INFO     | adding to output.list: log.44871837._098848.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/17/log.44871837._098848.job.log.tg
[2025-06-05 14:52:53] 2025-06-05 18:52:24,253 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 14:52:53] 2025-06-05 18:52:24,253 | INFO     | summary of transferred files:
[2025-06-05 14:52:53] 2025-06-05 18:52:24,253 | INFO     |  -- lfn=log.44871837._098848.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 14:52:53] 2025-06-05 18:52:24,254 | INFO     | stage-out finished correctly
[2025-06-05 14:52:53] 2025-06-05 18:52:25,820 | INFO     | 5596s have passed since pilot start - server update state is 'RUNNING'
[2025-06-05 14:52:53] 2025-06-05 18:52:26,667 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 14:52:53] 2025-06-05 18:52:26,938 | INFO     | PID=18997 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 14:52:53] 2025-06-05 18:52:28,110 | WARNING  | process 25406 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 14:52:53] 2025-06-05 18:52:28,111 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6670732850/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 14:52:53] 2025-06-05 18:52:28,224 | INFO     | number of running child processes to parent process 25406: 1
[2025-06-05 14:52:53] 2025-06-05 18:52:28,224 | INFO     | maximum number of monitored processes: 6
[2025-06-05 14:52:53] 2025-06-05 18:52:29,359 | INFO     | job 6670732850 has state=finished
[2025-06-05 14:52:53] 2025-06-05 18:52:29,359 | INFO     | preparing for final server update for job 6670732850 in state='finished'
[2025-06-05 14:52:53] 2025-06-05 18:52:29,360 | INFO     | this job has now completed (state=finished)
[2025-06-05 14:52:53] 2025-06-05 18:52:29,360 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 14:52:53] 2025-06-05 18:52:29,360 | INFO     | log transfer has been attempted: DONE
[2025-06-05 14:52:53] 2025-06-05 18:52:29,360 | INFO     | job 6670732850 has finished - writing final server update
[2025-06-05 14:52:53] 2025-06-05 18:52:29,361 | INFO     | total number of processed events: 400 (read)
[2025-06-05 14:52:53] 2025-06-05 18:52:29,362 | INFO     | executing command: lscpu
[2025-06-05 14:52:53] 2025-06-05 18:52:29,389 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 14:52:53] 2025-06-05 18:52:30,727 | INFO     | monitor loop #419: job 0:6670732850 is in state 'finished'
[2025-06-05 14:52:53] 2025-06-05 18:52:30,727 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:52:53] 2025-06-05 18:52:33,230 | INFO     | monitor loop #420: job 0:6670732850 is in state 'finished'
[2025-06-05 14:52:53] 2025-06-05 18:52:33,230 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:52:53] 2025-06-05 18:52:34,098 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 14:52:53] 2025-06-05 18:52:34,098 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6670732850/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 14:52:53] 2025-06-05 18:52:34,099 | INFO     | extracted standard info from prmon json
[2025-06-05 14:52:53] 2025-06-05 18:52:34,099 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 14:52:53] 2025-06-05 18:52:34,099 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 14:52:53] 2025-06-05 18:52:34,100 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 14:52:53] 2025-06-05 18:52:34,100 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 14:52:53] 2025-06-05 18:52:34,103 | INFO     | fitting pss+swap vs Time
[2025-06-05 14:52:53] 2025-06-05 18:52:34,103 | INFO     | sum of square deviations: 190403570.0
[2025-06-05 14:52:53] 2025-06-05 18:52:34,104 | INFO     | sum of deviations: -13034534899.999998
[2025-06-05 14:52:53] 2025-06-05 18:52:34,104 | INFO     | mean x: 1749146851.0
[2025-06-05 14:52:53] 2025-06-05 18:52:34,104 | INFO     | mean y: 2808034.6470588236
[2025-06-05 14:52:53] 2025-06-05 18:52:34,104 | INFO     | -- intersect: 119744867884.59946
[2025-06-05 14:52:53] 2025-06-05 18:52:34,104 | INFO     | intersect: 119744867884.59946
[2025-06-05 14:52:53] 2025-06-05 18:52:34,105 | INFO     | chi2: 0.10104582232432344
[2025-06-05 14:52:53] 2025-06-05 18:52:34,105 | INFO     | -- intersect: 119744867884.59946
[2025-06-05 14:52:53] 2025-06-05 18:52:34,105 | INFO     | current memory leak: -68.46 B/s (using 85 data points, chi2=0.10)
[2025-06-05 14:52:53] 2025-06-05 18:52:34,105 | INFO     | ..............................
[2025-06-05 14:52:53] 2025-06-05 18:52:34,106 | INFO     | . Timing measurements:
[2025-06-05 14:52:53] 2025-06-05 18:52:34,106 | INFO     | . get job = 0 s
[2025-06-05 14:52:53] 2025-06-05 18:52:34,106 | INFO     | . initial setup = 2 s
[2025-06-05 14:52:53] 2025-06-05 18:52:34,106 | INFO     | . payload setup = 10 s
[2025-06-05 14:52:53] 2025-06-05 18:52:34,106 | INFO     | . stage-in = 0 s
[2025-06-05 14:52:53] 2025-06-05 18:52:34,106 | INFO     | . payload execution = 5561 s
[2025-06-05 14:52:53] 2025-06-05 18:52:34,106 | INFO     | . stage-out = 0 s
[2025-06-05 14:52:53] 2025-06-05 18:52:34,107 | INFO     | . log creation = 0 s
[2025-06-05 14:52:53] 2025-06-05 18:52:34,107 | INFO     | ..............................
[2025-06-05 14:52:53] 2025-06-05 18:52:34,189 | INFO     | 
[2025-06-05 14:52:53] 2025-06-05 18:52:34,190 | INFO     | job summary report
[2025-06-05 14:52:53] 2025-06-05 18:52:34,190 | INFO     | --------------------------------------------------
[2025-06-05 14:52:53] 2025-06-05 18:52:34,190 | INFO     | PanDA job id: 6670732850
[2025-06-05 14:52:53] 2025-06-05 18:52:34,190 | INFO     | task id: 44871837
[2025-06-05 14:52:53] 2025-06-05 18:52:34,190 | INFO     | errors: (none)
[2025-06-05 14:52:53] 2025-06-05 18:52:34,191 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 14:52:53] 2025-06-05 18:52:34,191 | INFO     | pilot state: finished 
[2025-06-05 14:52:53] 2025-06-05 18:52:34,191 | INFO     | transexitcode: 0
[2025-06-05 14:52:53] 2025-06-05 18:52:34,191 | INFO     | exeerrorcode: 0
[2025-06-05 14:52:53] 2025-06-05 18:52:34,191 | INFO     | exeerrordiag: 
[2025-06-05 14:52:53] 2025-06-05 18:52:34,191 | INFO     | exitcode: 0
[2025-06-05 14:52:53] 2025-06-05 18:52:34,192 | INFO     | exitmsg: OK
[2025-06-05 14:52:53] 2025-06-05 18:52:34,192 | INFO     | cpuconsumptiontime: 59826 s
[2025-06-05 14:52:53] 2025-06-05 18:52:34,192 | INFO     | nevents: 400
[2025-06-05 14:52:53] 2025-06-05 18:52:34,192 | INFO     | neventsw: 0
[2025-06-05 14:52:53] 2025-06-05 18:52:34,192 | INFO     | pid: 25406
[2025-06-05 14:52:53] 2025-06-05 18:52:34,192 | INFO     | pgrp: 25406
[2025-06-05 14:52:53] 2025-06-05 18:52:34,192 | INFO     | corecount: 12
[2025-06-05 14:52:53] 2025-06-05 18:52:34,193 | INFO     | event service: False
[2025-06-05 14:52:53] 2025-06-05 18:52:34,193 | INFO     | sizes: {0: 2396513, 1: 2397369, 6: 2397575, 12: 2397603, 5574: 2424048, 5575: 2433172, 5578: 2433172, 5585: 2433342}
[2025-06-05 14:52:53] 2025-06-05 18:52:34,193 | INFO     | --------------------------------------------------
[2025-06-05 14:52:53] 2025-06-05 18:52:34,193 | INFO     | 
[2025-06-05 14:52:53] 2025-06-05 18:52:34,193 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 14:52:53] 2025-06-05 18:52:34,220 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 14:52:53] 2025-06-05 18:52:34,221 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 14:52:53] 2025-06-05 18:52:34,221 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 14:52:53] 2025-06-05 18:52:34,221 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 14:52:53] 2025-06-05 18:52:34,221 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 14:52:53] 2025-06-05 18:52:34,222 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 14:52:53] 2025-06-05 18:52:34,222 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 14:52:53] 2025-06-05 18:52:34,222 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 14:52:53] 2025-06-05 18:52:34,222 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 14:52:53] 2025-06-05 18:52:34,222 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 14:52:53] 2025-06-05 18:52:34,222 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 14:52:53] 2025-06-05 18:52:34,223 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 14:52:53] 2025-06-05 18:52:34,223 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 14:52:53] 2025-06-05 18:52:34,223 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 14:52:53] 2025-06-05 18:52:34,223 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 14:52:53] 2025-06-05 18:52:34,223 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 14:52:53] 2025-06-05 18:52:34,223 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 14:52:53] 2025-06-05 18:52:34,224 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 14:52:53] 2025-06-05 18:52:34,224 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 14:52:53] 2025-06-05 18:52:34,224 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 14:52:53] 2025-06-05 18:52:34,224 | INFO     | job 6670732850 has completed (purged errors)
[2025-06-05 14:52:53] 2025-06-05 18:52:34,224 | INFO     | overall cleanup function is called
[2025-06-05 14:52:53] 2025-06-05 18:52:35,233 | INFO     | --- collectZombieJob: --- 10, [25406]
[2025-06-05 14:52:53] 2025-06-05 18:52:35,233 | INFO     | zombie collector waiting for pid 25406
[2025-06-05 14:52:53] 2025-06-05 18:52:35,233 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 14:52:53] 2025-06-05 18:52:35,233 | INFO     | collected zombie processes
[2025-06-05 14:52:53] 2025-06-05 18:52:35,233 | INFO     | will attempt to kill all subprocesses of pid=25406
[2025-06-05 14:52:53] 2025-06-05 18:52:35,325 | INFO     | process IDs to be killed: [25406] (in reverse order)
[2025-06-05 14:52:53] 2025-06-05 18:52:35,377 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 14:52:53] 2025-06-05 18:52:35,377 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 14:52:53] 2025-06-05 18:52:35,381 | INFO     | did not find any defunct processes belonging to 25406
[2025-06-05 14:52:53] 2025-06-05 18:52:35,384 | INFO     | did not find any defunct processes belonging to 25406
[2025-06-05 14:52:53] 2025-06-05 18:52:35,385 | INFO     | ready for new job
[2025-06-05 14:52:53] 2025-06-05 18:52:35,385 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 14:52:53] 2025-06-05 18:52:35,386 | INFO     | **************************************
[2025-06-05 14:52:53] 2025-06-05 18:52:35,387 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 14:52:53] 2025-06-05 18:52:35,387 | INFO     | **************************************
[2025-06-05 14:52:53] 2025-06-05 18:52:35,387 | INFO     | 
[2025-06-05 14:52:53] 2025-06-05 18:52:35,387 | INFO     | architecture information:
[2025-06-05 14:52:53] 2025-06-05 18:52:35,388 | INFO     | executing command: cat /etc/os-release
[2025-06-05 14:52:53] 2025-06-05 18:52:35,402 | INFO     | cat /etc/os-release:
[2025-06-05 14:52:53] NAME="CentOS Linux"
[2025-06-05 14:52:53] VERSION="7 (Core)"
[2025-06-05 14:52:53] ID="centos"
[2025-06-05 14:52:53] ID_LIKE="rhel fedora"
[2025-06-05 14:52:53] VERSION_ID="7"
[2025-06-05 14:52:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 14:52:53] ANSI_COLOR="0;31"
[2025-06-05 14:52:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 14:52:53] HOME_URL="https://www.centos.org/"
[2025-06-05 14:52:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 14:52:53] 
[2025-06-05 14:52:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 14:52:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 14:52:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 14:52:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 14:52:53] 
[2025-06-05 14:52:53] 2025-06-05 18:52:35,402 | INFO     | **************************************
[2025-06-05 14:52:53] 2025-06-05 18:52:35,905 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 14:52:53] 2025-06-05 18:52:35,922 | INFO     | sufficient remaining disk space (29384245248 B)
[2025-06-05 14:52:53] 2025-06-05 18:52:35,922 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 14:52:53] 2025-06-05 18:52:35,923 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 14:52:53] 2025-06-05 18:52:35,923 | INFO     | update_server=False
[2025-06-05 14:52:53] 2025-06-05 18:52:35,923 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 14:52:53] 2025-06-05 18:52:35,923 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:52:53] 2025-06-05 18:52:35,924 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 14:52:53] 2025-06-05 18:52:35,924 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 14:52:53] 2025-06-05 18:52:35,924 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 14:52:53] 2025-06-05 18:52:35,924 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 14:52:53] 2025-06-05 18:52:36,078 | INFO     | all job control threads have been joined
[2025-06-05 14:52:53] 2025-06-05 18:52:36,289 | INFO     | all data control threads have been joined
[2025-06-05 14:52:53] 2025-06-05 18:52:36,452 | INFO     | all payload control threads have been joined
[2025-06-05 14:52:53] 2025-06-05 18:52:36,738 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:52:53] 2025-06-05 18:52:36,738 | INFO     | aborting loop
[2025-06-05 14:52:53] 2025-06-05 18:52:36,928 | INFO     | [job] retrieve thread has finished
[2025-06-05 14:52:53] 2025-06-05 18:52:36,929 | INFO     | [job] queue monitor thread has finished
[2025-06-05 14:52:53] 2025-06-05 18:52:37,083 | INFO     | [job] control thread has finished
[2025-06-05 14:52:53] 2025-06-05 18:52:37,203 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 14:52:53] 2025-06-05 18:52:37,208 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 14:52:53] 2025-06-05 18:52:37,262 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 14:52:53] 2025-06-05 18:52:37,294 | INFO     | [data] control thread has finished
[2025-06-05 14:52:53] 2025-06-05 18:52:37,316 | INFO     | [payload] validate_post thread has finished
[2025-06-05 14:52:53] 2025-06-05 18:52:37,353 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 14:52:53] 2025-06-05 18:52:37,457 | INFO     | [payload] control thread has finished
[2025-06-05 14:52:53] 2025-06-05 18:52:37,631 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 14:52:53] 2025-06-05 18:52:37,744 | INFO     | [job] job monitor thread has finished
[2025-06-05 14:52:53] 2025-06-05 18:52:37,833 | INFO     | [data] copytool_in thread has finished
[2025-06-05 14:52:53] 2025-06-05 18:52:38,294 | INFO     | [job] validate thread has finished
[2025-06-05 14:52:53] 2025-06-05 18:52:38,358 | INFO     | [payload] failed_post thread has finished
[2025-06-05 14:52:53] 2025-06-05 18:52:39,359 | INFO     | [data] copytool_out thread has finished
[2025-06-05 14:52:53] 2025-06-05 18:52:41,268 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 14:52:53] 2025-06-05 18:52:46,017 | INFO     | job.realtimelogging is not enabled
[2025-06-05 14:52:53] 2025-06-05 18:52:47,022 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 14:52:53] 2025-06-05 18:52:48,265 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139871107991360)>', '<ExcThread(monitor, started 139870349543168)>']
[2025-06-05 14:52:53] 2025-06-05 18:52:48,989 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 14:52:53] 2025-06-05 18:52:48,989 | INFO     | [monitor] control thread has ended
[2025-06-05 14:52:53] 2025-06-05 18:52:53,287 | INFO     | all workflow threads have been joined
[2025-06-05 14:52:53] 2025-06-05 18:52:53,287 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 14:52:53] 2025-06-05 18:52:53,287 | INFO     | traces error code: 0
[2025-06-05 14:52:53] 2025-06-05 18:52:53,288 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 14:52:53] 2025-06-05 18:52:53,380 [wrapper] ==== pilot stdout END ====
[2025-06-05 14:52:53] 2025-06-05 18:52:53,383 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 14:52:53] 2025-06-05 18:52:53,387 [wrapper] pilotpid: 18997
[2025-06-05 14:52:53] 2025-06-05 18:52:53,391 [wrapper] Pilot exit status: 0
[2025-06-05 14:52:53] 2025-06-05 18:52:53,407 [wrapper] pandaids: 6670732850
[2025-06-05 14:52:53] 2025-06-05 18:52:53,445 [wrapper] cleanup supervisor_pilot 13353 18998
[2025-06-05 14:52:53] 2025-06-05 18:52:53,449 [wrapper] Test setup, not cleaning
[2025-06-05 14:52:53] 2025-06-05 18:52:53,453 [wrapper] apfmon messages muted
[2025-06-05 14:52:53] 2025-06-05 18:52:53,457 [wrapper] ==== wrapper stdout END ====
[2025-06-05 14:52:53] 2025-06-05 18:52:53,461 [wrapper] ==== wrapper stderr END ====
[2025-06-05 14:52:53]  *** Error codes and diagnostics ***
[2025-06-05 14:52:53]     "exeErrorCode": 0,
[2025-06-05 14:52:53]     "exeErrorDiag": "",
[2025-06-05 14:52:53]     "pilotErrorCode": 0,
[2025-06-05 14:52:53]     "pilotErrorDiag": "",
[2025-06-05 14:52:53]  *** Listing of results directory ***
[2025-06-05 14:52:53] total 415300
[2025-06-05 14:52:53] -rw-r--r-- 1 boincer umatlas    495897 May 29 06:07 pilot3.tar.gz
[2025-06-05 14:52:53] -rw-r--r-- 1 boincer umatlas      5111 May 29 06:21 queuedata.json
[2025-06-05 14:52:53] -rwx------ 1 boincer umatlas     37140 May 29 06:23 runpilot2-wrapper.sh
[2025-06-05 14:52:53] -rw-r--r-- 1 boincer umatlas       100 Jun  5 13:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 14:52:53] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 13:18 run_atlas
[2025-06-05 14:52:53] -rw-r--r-- 1 boincer umatlas       105 Jun  5 13:18 job.xml
[2025-06-05 14:52:53] -rw-r--r-- 2 boincer umatlas 226314374 Jun  5 13:18 EVNT.44871834._002804.pool.root.1
[2025-06-05 14:52:53] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 13:18 start_atlas.sh
[2025-06-05 14:52:53] drwxrwx--x 2 boincer umatlas      4096 Jun  5 13:18 shared
[2025-06-05 14:52:53] -rw-r--r-- 2 boincer umatlas    508883 Jun  5 13:18 input.tar.gz
[2025-06-05 14:52:53] -rw-r--r-- 1 boincer umatlas         0 Jun  5 13:18 boinc_lockfile
[2025-06-05 14:52:53] -rw-r--r-- 1 boincer umatlas      2558 Jun  5 13:18 pandaJob.out
[2025-06-05 14:52:53] -rw------- 1 boincer umatlas    983229 Jun  5 13:19 agis_schedconf.cvmfs.json
[2025-06-05 14:52:53] -rw------- 1 boincer umatlas   1598969 Jun  5 13:19 agis_ddmendpoints.agis.ALL.json
[2025-06-05 14:52:53] drwx------ 4 boincer umatlas      4096 Jun  5 13:19 pilot3
[2025-06-05 14:52:53] -rw-r--r-- 1 boincer umatlas      5867 Jun  5 14:49 init_data.xml
[2025-06-05 14:52:53] -rw------- 1 boincer umatlas 193295385 Jun  5 14:51 HITS.44871837._098848.pool.root.1
[2025-06-05 14:52:53] -rw-r--r-- 1 boincer umatlas       530 Jun  5 14:52 boinc_task_state.xml
[2025-06-05 14:52:53] -rw------- 1 boincer umatlas      1045 Jun  5 14:52 memory_monitor_summary.json
[2025-06-05 14:52:53] -rw------- 1 boincer umatlas        95 Jun  5 14:52 pilot_heartbeat.json
[2025-06-05 14:52:53] -rw------- 1 boincer umatlas    385390 Jun  5 14:52 log.44871837._098848.job.log.tgz.1
[2025-06-05 14:52:53] -rw------- 1 boincer umatlas      7755 Jun  5 14:52 heartbeat.json
[2025-06-05 14:52:53] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 14:52 boinc_mmap_file
[2025-06-05 14:52:53] -rw-r--r-- 1 boincer umatlas        27 Jun  5 14:52 wrapper_checkpoint.txt
[2025-06-05 14:52:53] -rw------- 1 boincer umatlas      4548 Jun  5 14:52 pilotlog.txt
[2025-06-05 14:52:53] -rw------- 1 boincer umatlas    526677 Jun  5 14:52 log.44871837._098848.job.log.1
[2025-06-05 14:52:53] -rw------- 1 boincer umatlas       357 Jun  5 14:52 output.list
[2025-06-05 14:52:53] -rw-r--r-- 1 boincer umatlas       620 Jun  5 14:52 runtime_log
[2025-06-05 14:52:53] -rw------- 1 boincer umatlas    931840 Jun  5 14:52 result.tar.gz
[2025-06-05 14:52:53] -rw------- 1 boincer umatlas       659 Jun  5 14:52 wk8LDmIbpe7n9Rq4apOajLDm4fhM0noT9bVof3QYDm94UKDmxNCYtn.diag
[2025-06-05 14:52:53] -rw-r--r-- 1 boincer umatlas      8661 Jun  5 14:52 runtime_log.err
[2025-06-05 14:52:53] -rw-r--r-- 1 boincer umatlas     21746 Jun  5 14:52 stderr.txt
[2025-06-05 14:52:53] HITS file was successfully produced:
[2025-06-05 14:52:53] -rw------- 1 boincer umatlas 193295385 Jun  5 14:51 shared/HITS.pool.root.1
[2025-06-05 14:52:53]  *** Contents of shared directory: ***
[2025-06-05 14:52:53] total 411212
[2025-06-05 14:52:53] -rw-r--r-- 2 boincer umatlas 226314374 Jun  5 13:18 ATLAS.root_0
[2025-06-05 14:52:53] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 13:18 start_atlas.sh
[2025-06-05 14:52:53] -rw-r--r-- 2 boincer umatlas    508883 Jun  5 13:18 input.tar.gz
[2025-06-05 14:52:53] -rw------- 1 boincer umatlas 193295385 Jun  5 14:51 HITS.pool.root.1
[2025-06-05 14:52:53] -rw------- 1 boincer umatlas    931840 Jun  5 14:52 result.tar.gz
14:52:54 (15281): run_atlas exited; CPU time 59716.654695
14:52:54 (15281): called boinc_finish(0)

</stderr_txt>
]]>

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