Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:18:56 (2877684): wrapper (7.7.26015): starting
13:18:56 (2877684): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 13:18:56] Arguments: --nthreads 12
[2025-06-05 13:18:56] Threads: 12
[2025-06-05 13:18:56] Checking for CVMFS
[2025-06-05 13:18:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 13:18:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 13:18:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 13:18:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 13:18:57] 2.12.6.0 5653 2551 122788 146826 0 290 16983150 32935936 8504 16776704 0 8008266 99.696 5958726 34832 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 13:18:57] CVMFS is ok
[2025-06-05 13:18:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 13:18:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 13:18:57] Further information can be found at the LHC@home message board.
[2025-06-05 13:18:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 13:18:57] Checking for apptainer binary...
[2025-06-05 13:18:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 13:18:57] Running /usr/bin/apptainer --version
[2025-06-05 13:18:57] apptainer version 1.4.1-1.el9
[2025-06-05 13:18:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:18:57] c6-1-24-2.aglt2.org
[2025-06-05 13:18:57] apptainer works
[2025-06-05 13:18:57] Set ATHENA_PROC_NUMBER=12
[2025-06-05 13:18:57] Set ATHENA_CORE_NUMBER=12
[2025-06-05 13:18:57] Starting ATLAS job with PandaID=6669233905
[2025-06-05 13:18:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 14:44:09]  *** The last 200 lines of the pilot log: ***
[2025-06-05 14:44:09]  is_tar=False
[2025-06-05 14:44:09]  lfn=log.44871837._094470.job.log.tgz.1
[2025-06-05 14:44:09]  mtime=0
[2025-06-05 14:44:09]  protocol_id=None
[2025-06-05 14:44:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 14:44:09]  replicas=None
[2025-06-05 14:44:09]  scope=mc23_13p6TeV
[2025-06-05 14:44:09]  status=None
[2025-06-05 14:44:09]  status_code=0
[2025-06-05 14:44:09]  storage_token=
[2025-06-05 14:44:09]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6669233905/log.44871837._094470.job.log.tgz.1
[2025-06-05 14:44:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/69/0a/log.44871837._094470.job.log.tgz.1
[2025-06-05 14:44:09]  workdir=None
[2025-06-05 14:44:09] ]
[2025-06-05 14:44:09] 2025-06-05 18:43:51,602 | INFO     | transferring file log.44871837._094470.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6669233905/log.44871837._094470.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 14:44:09] 2025-06-05 18:43:51,603 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6669233905/log.44871837._094470.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._094470.job
[2025-06-05 14:44:09] 2025-06-05 18:43:51,621 | INFO     | adding to output.list: log.44871837._094470.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/69/0a/log.44871837._094470.job.log.tg
[2025-06-05 14:44:09] 2025-06-05 18:43:51,622 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 14:44:09] 2025-06-05 18:43:51,622 | INFO     | summary of transferred files:
[2025-06-05 14:44:09] 2025-06-05 18:43:51,622 | INFO     |  -- lfn=log.44871837._094470.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 14:44:09] 2025-06-05 18:43:51,622 | INFO     | stage-out finished correctly
[2025-06-05 14:44:09] 2025-06-05 18:43:51,771 | INFO     | monitor loop #364: job 0:6669233905 is in state 'finished'
[2025-06-05 14:44:09] 2025-06-05 18:43:51,772 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:44:09] 2025-06-05 18:43:52,357 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 14:44:09] 2025-06-05 18:43:53,019 | INFO     | job 6669233905 has state=finished
[2025-06-05 14:44:09] 2025-06-05 18:43:53,019 | INFO     | preparing for final server update for job 6669233905 in state='finished'
[2025-06-05 14:44:09] 2025-06-05 18:43:53,082 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-05 14:44:09] 2025-06-05 18:43:53,083 | INFO     | this job has now completed (state=finished)
[2025-06-05 14:44:09] 2025-06-05 18:43:53,083 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 14:44:09] 2025-06-05 18:43:53,083 | INFO     | log transfer has been attempted: DONE
[2025-06-05 14:44:09] 2025-06-05 18:43:53,083 | INFO     | job 6669233905 has finished - writing final server update
[2025-06-05 14:44:09] 2025-06-05 18:43:53,083 | INFO     | total number of processed events: 400 (read)
[2025-06-05 14:44:09] 2025-06-05 18:43:53,098 | INFO     | executing command: lscpu
[2025-06-05 14:44:09] 2025-06-05 18:43:53,163 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 14:44:09] 2025-06-05 18:43:54,275 | INFO     | monitor loop #365: job 0:6669233905 is in state 'finished'
[2025-06-05 14:44:09] 2025-06-05 18:43:54,275 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:44:09] 2025-06-05 18:43:56,777 | INFO     | monitor loop #366: job 0:6669233905 is in state 'finished'
[2025-06-05 14:44:09] 2025-06-05 18:43:56,778 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:44:09] 2025-06-05 18:43:56,897 | INFO     | PID=2881314 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 14:44:09] 2025-06-05 18:43:56,897 | INFO     | .. there are 8 such processes running
[2025-06-05 14:44:09] 2025-06-05 18:43:57,072 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 14:44:09] 2025-06-05 18:43:57,072 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669233905/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 14:44:09] 2025-06-05 18:43:57,073 | INFO     | extracted standard info from prmon json
[2025-06-05 14:44:09] 2025-06-05 18:43:57,073 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 14:44:09] 2025-06-05 18:43:57,073 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 14:44:09] 2025-06-05 18:43:57,074 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 14:44:09] 2025-06-05 18:43:57,074 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 14:44:09] 2025-06-05 18:43:57,075 | INFO     | fitting pss+swap vs Time
[2025-06-05 14:44:09] 2025-06-05 18:43:57,075 | INFO     | sum of square deviations: 136098930.98684177
[2025-06-05 14:44:09] 2025-06-05 18:43:57,076 | INFO     | sum of deviations: -9279126889.144737
[2025-06-05 14:44:09] 2025-06-05 18:43:57,076 | INFO     | mean x: 1749146566.5131578
[2025-06-05 14:44:09] 2025-06-05 18:43:57,076 | INFO     | mean y: 2466310.6447368423
[2025-06-05 14:44:09] 2025-06-05 18:43:57,076 | INFO     | -- intersect: 119258016818.65443
[2025-06-05 14:44:09] 2025-06-05 18:43:57,076 | INFO     | intersect: 119258016818.65443
[2025-06-05 14:44:09] 2025-06-05 18:43:57,076 | INFO     | chi2: 0.08074313298530299
[2025-06-05 14:44:09] 2025-06-05 18:43:57,076 | INFO     | -- intersect: 119258016818.65443
[2025-06-05 14:44:09] 2025-06-05 18:43:57,076 | INFO     | current memory leak: -68.18 B/s (using 76 data points, chi2=0.08)
[2025-06-05 14:44:09] 2025-06-05 18:43:57,077 | INFO     | ..............................
[2025-06-05 14:44:09] 2025-06-05 18:43:57,077 | INFO     | . Timing measurements:
[2025-06-05 14:44:09] 2025-06-05 18:43:57,077 | INFO     | . get job = 0 s
[2025-06-05 14:44:09] 2025-06-05 18:43:57,077 | INFO     | . initial setup = 2 s
[2025-06-05 14:44:09] 2025-06-05 18:43:57,077 | INFO     | . payload setup = 5 s
[2025-06-05 14:44:09] 2025-06-05 18:43:57,077 | INFO     | . stage-in = 0 s
[2025-06-05 14:44:09] 2025-06-05 18:43:57,077 | INFO     | . payload execution = 5056 s
[2025-06-05 14:44:09] 2025-06-05 18:43:57,077 | INFO     | . stage-out = 0 s
[2025-06-05 14:44:09] 2025-06-05 18:43:57,077 | INFO     | . log creation = 0 s
[2025-06-05 14:44:09] 2025-06-05 18:43:57,077 | INFO     | ..............................
[2025-06-05 14:44:09] 2025-06-05 18:43:57,349 | INFO     | 
[2025-06-05 14:44:09] 2025-06-05 18:43:57,350 | INFO     | job summary report
[2025-06-05 14:44:09] 2025-06-05 18:43:57,350 | INFO     | --------------------------------------------------
[2025-06-05 14:44:09] 2025-06-05 18:43:57,350 | INFO     | PanDA job id: 6669233905
[2025-06-05 14:44:09] 2025-06-05 18:43:57,350 | INFO     | task id: 44871837
[2025-06-05 14:44:09] 2025-06-05 18:43:57,350 | INFO     | errors: (none)
[2025-06-05 14:44:09] 2025-06-05 18:43:57,350 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 14:44:09] 2025-06-05 18:43:57,350 | INFO     | pilot state: finished 
[2025-06-05 14:44:09] 2025-06-05 18:43:57,350 | INFO     | transexitcode: 0
[2025-06-05 14:44:09] 2025-06-05 18:43:57,350 | INFO     | exeerrorcode: 0
[2025-06-05 14:44:09] 2025-06-05 18:43:57,350 | INFO     | exeerrordiag: 
[2025-06-05 14:44:09] 2025-06-05 18:43:57,350 | INFO     | exitcode: 0
[2025-06-05 14:44:09] 2025-06-05 18:43:57,350 | INFO     | exitmsg: OK
[2025-06-05 14:44:09] 2025-06-05 18:43:57,350 | INFO     | cpuconsumptiontime: 49764 s
[2025-06-05 14:44:09] 2025-06-05 18:43:57,351 | INFO     | nevents: 400
[2025-06-05 14:44:09] 2025-06-05 18:43:57,351 | INFO     | neventsw: 0
[2025-06-05 14:44:09] 2025-06-05 18:43:57,351 | INFO     | pid: 2895552
[2025-06-05 14:44:09] 2025-06-05 18:43:57,351 | INFO     | pgrp: 2895552
[2025-06-05 14:44:09] 2025-06-05 18:43:57,351 | INFO     | corecount: 12
[2025-06-05 14:44:09] 2025-06-05 18:43:57,351 | INFO     | event service: False
[2025-06-05 14:44:09] 2025-06-05 18:43:57,351 | INFO     | sizes: {0: 2397278, 1: 2397420, 5: 2397626, 11: 2397682, 5066: 2423914, 5068: 2432855, 5069: 2433039, 5073: 2433209}
[2025-06-05 14:44:09] 2025-06-05 18:43:57,351 | INFO     | --------------------------------------------------
[2025-06-05 14:44:09] 2025-06-05 18:43:57,351 | INFO     | 
[2025-06-05 14:44:09] 2025-06-05 18:43:57,351 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 14:44:09] 2025-06-05 18:43:57,370 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 14:44:09] 2025-06-05 18:43:57,371 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 14:44:09] 2025-06-05 18:43:57,371 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 14:44:09] 2025-06-05 18:43:57,371 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 14:44:09] 2025-06-05 18:43:57,371 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 14:44:09] 2025-06-05 18:43:57,371 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 14:44:09] 2025-06-05 18:43:57,371 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 14:44:09] 2025-06-05 18:43:57,371 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 14:44:09] 2025-06-05 18:43:57,371 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 14:44:09] 2025-06-05 18:43:57,371 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 14:44:09] 2025-06-05 18:43:57,371 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 14:44:09] 2025-06-05 18:43:57,371 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 14:44:09] 2025-06-05 18:43:57,371 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 14:44:09] 2025-06-05 18:43:57,371 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 14:44:09] 2025-06-05 18:43:57,372 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 14:44:09] 2025-06-05 18:43:57,372 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 14:44:09] 2025-06-05 18:43:57,372 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 14:44:09] 2025-06-05 18:43:57,372 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 14:44:09] 2025-06-05 18:43:57,372 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 14:44:09] 2025-06-05 18:43:57,372 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 14:44:09] 2025-06-05 18:43:57,372 | INFO     | job 6669233905 has completed (purged errors)
[2025-06-05 14:44:09] 2025-06-05 18:43:57,372 | INFO     | overall cleanup function is called
[2025-06-05 14:44:09] 2025-06-05 18:43:58,379 | INFO     | --- collectZombieJob: --- 10, [2895552]
[2025-06-05 14:44:09] 2025-06-05 18:43:58,380 | INFO     | zombie collector waiting for pid 2895552
[2025-06-05 14:44:09] 2025-06-05 18:43:58,380 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 14:44:09] 2025-06-05 18:43:58,380 | INFO     | collected zombie processes
[2025-06-05 14:44:09] 2025-06-05 18:43:58,380 | INFO     | will attempt to kill all subprocesses of pid=2895552
[2025-06-05 14:44:09] 2025-06-05 18:43:58,626 | INFO     | process IDs to be killed: [2895552] (in reverse order)
[2025-06-05 14:44:09] 2025-06-05 18:43:58,700 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 14:44:09] 2025-06-05 18:43:58,702 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 14:44:09] 2025-06-05 18:43:58,713 | INFO     | did not find any defunct processes belonging to 2895552
[2025-06-05 14:44:09] 2025-06-05 18:43:58,724 | INFO     | did not find any defunct processes belonging to 2895552
[2025-06-05 14:44:09] 2025-06-05 18:43:58,725 | INFO     | ready for new job
[2025-06-05 14:44:09] 2025-06-05 18:43:58,725 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 14:44:09] 2025-06-05 18:43:58,728 | INFO     | **************************************
[2025-06-05 14:44:09] 2025-06-05 18:43:58,728 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 14:44:09] 2025-06-05 18:43:58,728 | INFO     | **************************************
[2025-06-05 14:44:09] 2025-06-05 18:43:58,729 | INFO     | 
[2025-06-05 14:44:09] 2025-06-05 18:43:58,744 | INFO     | architecture information:
[2025-06-05 14:44:09] 2025-06-05 18:43:58,745 | INFO     | executing command: cat /etc/os-release
[2025-06-05 14:44:09] 2025-06-05 18:43:58,760 | INFO     | cat /etc/os-release:
[2025-06-05 14:44:09] NAME="CentOS Linux"
[2025-06-05 14:44:09] VERSION="7 (Core)"
[2025-06-05 14:44:09] ID="centos"
[2025-06-05 14:44:09] ID_LIKE="rhel fedora"
[2025-06-05 14:44:09] VERSION_ID="7"
[2025-06-05 14:44:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 14:44:09] ANSI_COLOR="0;31"
[2025-06-05 14:44:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 14:44:09] HOME_URL="https://www.centos.org/"
[2025-06-05 14:44:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 14:44:09] 
[2025-06-05 14:44:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 14:44:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 14:44:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 14:44:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 14:44:09] 
[2025-06-05 14:44:09] 2025-06-05 18:43:58,761 | INFO     | **************************************
[2025-06-05 14:44:09] 2025-06-05 18:43:59,264 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 14:44:09] 2025-06-05 18:43:59,280 | INFO     | sufficient remaining disk space (76252446720 B)
[2025-06-05 14:44:09] 2025-06-05 18:43:59,281 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 14:44:09] 2025-06-05 18:43:59,281 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 14:44:09] 2025-06-05 18:43:59,281 | INFO     | update_server=False
[2025-06-05 14:44:09] 2025-06-05 18:43:59,281 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 14:44:09] 2025-06-05 18:43:59,282 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 14:44:09] 2025-06-05 18:43:59,282 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 14:44:09] 2025-06-05 18:43:59,283 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 14:44:09] 2025-06-05 18:43:59,283 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 14:44:09] 2025-06-05 18:43:59,283 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 14:44:09] 2025-06-05 18:43:59,725 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 14:44:09] 2025-06-05 18:44:00,157 | INFO     | all job control threads have been joined
[2025-06-05 14:44:09] 2025-06-05 18:44:00,259 | INFO     | all data control threads have been joined
[2025-06-05 14:44:09] 2025-06-05 18:44:00,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:44:09] 2025-06-05 18:44:00,286 | INFO     | aborting loop
[2025-06-05 14:44:09] 2025-06-05 18:44:00,287 | INFO     | [job] retrieve thread has finished
[2025-06-05 14:44:09] 2025-06-05 18:44:00,416 | INFO     | [payload] validate_post thread has finished
[2025-06-05 14:44:09] 2025-06-05 18:44:00,454 | INFO     | all payload control threads have been joined
[2025-06-05 14:44:09] 2025-06-05 18:44:00,547 | INFO     | [payload] failed_post thread has finished
[2025-06-05 14:44:09] 2025-06-05 18:44:01,102 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 14:44:09] 2025-06-05 18:44:01,162 | INFO     | [job] control thread has finished
[2025-06-05 14:44:09] 2025-06-05 18:44:01,236 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 14:44:09] 2025-06-05 18:44:01,265 | INFO     | [data] control thread has finished
[2025-06-05 14:44:09] 2025-06-05 18:44:01,290 | INFO     | [job] job monitor thread has finished
[2025-06-05 14:44:09] 2025-06-05 18:44:01,436 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 14:44:09] 2025-06-05 18:44:01,459 | INFO     | [payload] control thread has finished
[2025-06-05 14:44:09] 2025-06-05 18:44:01,538 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 14:44:09] 2025-06-05 18:44:01,539 | INFO     | [job] validate thread has finished
[2025-06-05 14:44:09] 2025-06-05 18:44:01,595 | INFO     | [data] copytool_in thread has finished
[2025-06-05 14:44:09] 2025-06-05 18:44:01,731 | INFO     | [data] copytool_out thread has finished
[2025-06-05 14:44:09] 2025-06-05 18:44:02,166 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:44:09] 2025-06-05 18:44:03,171 | INFO     | [job] queue monitor thread has finished
[2025-06-05 14:44:09] 2025-06-05 18:44:03,288 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 14:44:09] 2025-06-05 18:44:04,480 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140111941072704)>', '<ExcThread(monitor, started 140111161325312)>']
[2025-06-05 14:44:09] 2025-06-05 18:44:05,313 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 14:44:09] 2025-06-05 18:44:05,314 | INFO     | [monitor] control thread has ended
[2025-06-05 14:44:09] 2025-06-05 18:44:09,507 | INFO     | all workflow threads have been joined
[2025-06-05 14:44:09] 2025-06-05 18:44:09,507 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 14:44:09] 2025-06-05 18:44:09,508 | INFO     | traces error code: 0
[2025-06-05 14:44:09] 2025-06-05 18:44:09,508 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 14:44:09] 2025-06-05 18:44:09,666 [wrapper] ==== pilot stdout END ====
[2025-06-05 14:44:09] 2025-06-05 18:44:09,669 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 14:44:09] 2025-06-05 18:44:09,671 [wrapper] pilotpid: 2881314
[2025-06-05 14:44:09] 2025-06-05 18:44:09,674 [wrapper] Pilot exit status: 0
[2025-06-05 14:44:09] 2025-06-05 18:44:09,683 [wrapper] pandaids: 6669233905
[2025-06-05 14:44:09] 2025-06-05 18:44:09,740 [wrapper] cleanup supervisor_pilot 2991032 2881315
[2025-06-05 14:44:09] 2025-06-05 18:44:09,743 [wrapper] Test setup, not cleaning
[2025-06-05 14:44:09] 2025-06-05 18:44:09,746 [wrapper] apfmon messages muted
[2025-06-05 14:44:09] 2025-06-05 18:44:09,749 [wrapper] ==== wrapper stdout END ====
[2025-06-05 14:44:09] 2025-06-05 18:44:09,751 [wrapper] ==== wrapper stderr END ====
[2025-06-05 14:44:09]  *** Error codes and diagnostics ***
[2025-06-05 14:44:09]     "exeErrorCode": 0,
[2025-06-05 14:44:09]     "exeErrorDiag": "",
[2025-06-05 14:44:09]     "pilotErrorCode": 0,
[2025-06-05 14:44:09]     "pilotErrorDiag": "",
[2025-06-05 14:44:09]  *** Listing of results directory ***
[2025-06-05 14:44:09] total 418988
[2025-06-05 14:44:09] -rw-r--r--. 1 boincer umatlas    495897 May 28 23:30 pilot3.tar.gz
[2025-06-05 14:44:09] -rw-r--r--. 1 boincer umatlas      5111 May 28 23:36 queuedata.json
[2025-06-05 14:44:09] -rwx------. 1 boincer umatlas     37140 May 28 23:37 runpilot2-wrapper.sh
[2025-06-05 14:44:09] -rw-r--r--. 1 boincer umatlas       100 Jun  5 13:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 14:44:09] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 13:18 run_atlas
[2025-06-05 14:44:09] -rw-r--r--. 1 boincer umatlas       105 Jun  5 13:18 job.xml
[2025-06-05 14:44:09] -rw-r--r--. 2 boincer umatlas 227226510 Jun  5 13:18 EVNT.44871834._003669.pool.root.1
[2025-06-05 14:44:09] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 13:18 start_atlas.sh
[2025-06-05 14:44:09] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 13:18 shared
[2025-06-05 14:44:09] -rw-r--r--. 2 boincer umatlas    508887 Jun  5 13:18 input.tar.gz
[2025-06-05 14:44:09] -rw-r--r--. 1 boincer umatlas         0 Jun  5 13:18 boinc_lockfile
[2025-06-05 14:44:09] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 13:18 pandaJob.out
[2025-06-05 14:44:09] -rw-------. 1 boincer umatlas    983229 Jun  5 13:19 agis_schedconf.cvmfs.json
[2025-06-05 14:44:09] -rw-------. 1 boincer umatlas   1598969 Jun  5 13:19 agis_ddmendpoints.agis.ALL.json
[2025-06-05 14:44:09] drwx------. 4 boincer umatlas      4096 Jun  5 13:19 pilot3
[2025-06-05 14:44:09] -rw-r--r--. 1 boincer umatlas      6839 Jun  5 14:40 init_data.xml
[2025-06-05 14:44:09] -rw-------. 1 boincer umatlas 196242553 Jun  5 14:43 HITS.44871837._094470.pool.root.1
[2025-06-05 14:44:09] -rw-r--r--. 1 boincer umatlas       529 Jun  5 14:43 boinc_task_state.xml
[2025-06-05 14:44:09] -rw-------. 1 boincer umatlas        95 Jun  5 14:43 pilot_heartbeat.json
[2025-06-05 14:44:09] -rw-------. 1 boincer umatlas      1029 Jun  5 14:43 memory_monitor_summary.json
[2025-06-05 14:44:09] -rw-------. 1 boincer umatlas    383559 Jun  5 14:43 log.44871837._094470.job.log.tgz.1
[2025-06-05 14:44:09] -rw-------. 1 boincer umatlas      7713 Jun  5 14:43 heartbeat.json
[2025-06-05 14:44:09] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 14:44 boinc_mmap_file
[2025-06-05 14:44:09] -rw-r--r--. 1 boincer umatlas        27 Jun  5 14:44 wrapper_checkpoint.txt
[2025-06-05 14:44:09] -rw-------. 1 boincer umatlas      4476 Jun  5 14:44 pilotlog.txt
[2025-06-05 14:44:09] -rw-------. 1 boincer umatlas    486416 Jun  5 14:44 log.44871837._094470.job.log.1
[2025-06-05 14:44:09] -rw-------. 1 boincer umatlas       357 Jun  5 14:44 output.list
[2025-06-05 14:44:09] -rw-r--r--. 1 boincer umatlas       620 Jun  5 14:44 runtime_log
[2025-06-05 14:44:09] -rw-------. 1 boincer umatlas    890880 Jun  5 14:44 result.tar.gz
[2025-06-05 14:44:09] -rw-------. 1 boincer umatlas       654 Jun  5 14:44 uFlNDm1Fje7n9Rq4apOajLDm4fhM0noT9bVof3QYDm6ZUKDmXQ76Pn.diag
[2025-06-05 14:44:09] -rw-r--r--. 1 boincer umatlas      8666 Jun  5 14:44 runtime_log.err
[2025-06-05 14:44:09] -rw-r--r--. 1 boincer umatlas     21624 Jun  5 14:44 stderr.txt
[2025-06-05 14:44:09] HITS file was successfully produced:
[2025-06-05 14:44:09] -rw-------. 1 boincer umatlas 196242553 Jun  5 14:43 shared/HITS.pool.root.1
[2025-06-05 14:44:09]  *** Contents of shared directory: ***
[2025-06-05 14:44:09] total 414944
[2025-06-05 14:44:09] -rw-r--r--. 2 boincer umatlas 227226510 Jun  5 13:18 ATLAS.root_0
[2025-06-05 14:44:09] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 13:18 start_atlas.sh
[2025-06-05 14:44:09] -rw-r--r--. 2 boincer umatlas    508887 Jun  5 13:18 input.tar.gz
[2025-06-05 14:44:09] -rw-------. 1 boincer umatlas 196242553 Jun  5 14:43 HITS.pool.root.1
[2025-06-05 14:44:09] -rw-------. 1 boincer umatlas    890880 Jun  5 14:44 result.tar.gz
14:44:10 (2877684): run_atlas exited; CPU time 49804.412091
14:44:10 (2877684): called boinc_finish(0)

</stderr_txt>
]]>

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