Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:19:02 (3398): wrapper (7.7.26015): starting
13:19:02 (3398): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 13:19:03] Arguments: --nthreads 8
[2025-06-05 13:19:03] Threads: 8
[2025-06-05 13:19:03] Checking for CVMFS
[2025-06-05 13:19:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 13:19:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 13:19:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 13:19:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 13:19:04] 2.11.2.0 11123 110591 439052 146827 3 21 10751076 18432001 12932 130560 0 496824563 99.133 944061686 34922 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 13:19:04] CVMFS is ok
[2025-06-05 13:19:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 13:19:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 13:19:04] Further information can be found at the LHC@home message board.
[2025-06-05 13:19:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 13:19:04] Checking for apptainer binary...
[2025-06-05 13:19:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 13:19:04] Running /usr/bin/apptainer --version
[2025-06-05 13:19:05] apptainer version 1.3.2-1.el7
[2025-06-05 13:19:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:19:18] c-211-15.aglt2.org
[2025-06-05 13:19:18] apptainer works
[2025-06-05 13:19:18] Set ATHENA_PROC_NUMBER=8
[2025-06-05 13:19:18] Set ATHENA_CORE_NUMBER=8
[2025-06-05 13:19:18] Starting ATLAS job with PandaID=6668992069
[2025-06-05 13:19:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 17:41:56]  *** The last 200 lines of the pilot log: ***
[2025-06-05 17:41:56] 2025-06-05 21:41:42,442 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 17:41:56] 2025-06-05 21:41:42,442 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668992069/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 17:41:56] 2025-06-05 21:41:42,443 | INFO     | extracted standard info from prmon json
[2025-06-05 17:41:56] 2025-06-05 21:41:42,444 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 17:41:56] 2025-06-05 21:41:42,444 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 17:41:56] 2025-06-05 21:41:42,444 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 17:41:56] 2025-06-05 21:41:42,444 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 17:41:56] 2025-06-05 21:41:42,456 | INFO     | fitting pss+swap vs Time
[2025-06-05 17:41:56] 2025-06-05 21:41:42,457 | INFO     | sum of square deviations: 5021270910.901222
[2025-06-05 17:41:56] 2025-06-05 21:41:42,459 | INFO     | sum of deviations: 94563537958.004
[2025-06-05 17:41:56] 2025-06-05 21:41:42,459 | INFO     | mean x: 1749151971.110672
[2025-06-05 17:41:56] 2025-06-05 21:41:42,460 | INFO     | mean y: 2433085.0355731226
[2025-06-05 17:41:56] 2025-06-05 21:41:42,460 | INFO     | -- intersect: -32938629396.84401
[2025-06-05 17:41:56] 2025-06-05 21:41:42,460 | INFO     | intersect: -32938629396.84401
[2025-06-05 17:41:56] 2025-06-05 21:41:42,460 | INFO     | chi2: 5.43256096525482
[2025-06-05 17:41:56] 2025-06-05 21:41:42,465 | INFO     | sum of square deviations: 4729404210.838738
[2025-06-05 17:41:56] 2025-06-05 21:41:42,467 | INFO     | sum of deviations: 109616902016.35464
[2025-06-05 17:41:56] 2025-06-05 21:41:42,467 | INFO     | mean x: 1749151818.612903
[2025-06-05 17:41:56] 2025-06-05 21:41:42,467 | INFO     | mean y: 2440805.9516129033
[2025-06-05 17:41:56] 2025-06-05 21:41:42,468 | INFO     | -- intersect: -40538945585.425476
[2025-06-05 17:41:56] 2025-06-05 21:41:42,468 | INFO     | intersect: -40538945585.425476
[2025-06-05 17:41:56] 2025-06-05 21:41:42,468 | INFO     | chi2: 4.646812944951823
[2025-06-05 17:41:56] 2025-06-05 21:41:42,468 | INFO     | current chi2=4.646812944951823 (change=14.463676069692118 %)
[2025-06-05 17:41:56] 2025-06-05 21:41:42,472 | INFO     | right removable region: 247
[2025-06-05 17:41:56] 2025-06-05 21:41:42,473 | INFO     | sum of square deviations: 4729387130.838738
[2025-06-05 17:41:56] 2025-06-05 21:41:42,475 | INFO     | sum of deviations: 13696426873.451614
[2025-06-05 17:41:56] 2025-06-05 21:41:42,476 | INFO     | mean x: 1749152123.612903
[2025-06-05 17:41:56] 2025-06-05 21:41:42,476 | INFO     | mean y: 2475274.4838709678
[2025-06-05 17:41:56] 2025-06-05 21:41:42,476 | INFO     | -- intersect: -5063114301.677136
[2025-06-05 17:41:56] 2025-06-05 21:41:42,476 | INFO     | intersect: -5063114301.677136
[2025-06-05 17:41:56] 2025-06-05 21:41:42,481 | INFO     | chi2: 1.422528369411415
[2025-06-05 17:41:56] 2025-06-05 21:41:42,481 | INFO     | current chi2=1.422528369411415 (change=73.81477394345836 %)
[2025-06-05 17:41:56] 2025-06-05 21:41:42,481 | INFO     | sum of square deviations: 4449038450.773654
[2025-06-05 17:41:56] 2025-06-05 21:41:42,483 | INFO     | sum of deviations: -12970012789.917696
[2025-06-05 17:41:56] 2025-06-05 21:41:42,484 | INFO     | mean x: 1749152276.1152263
[2025-06-05 17:41:56] 2025-06-05 21:41:42,484 | INFO     | mean y: 2489713.1399176954
[2025-06-05 17:41:56] 2025-06-05 21:41:42,484 | INFO     | -- intersect: 5101687583.363565
[2025-06-05 17:41:56] 2025-06-05 21:41:42,484 | INFO     | intersect: 5101687583.363565
[2025-06-05 17:41:56] 2025-06-05 21:41:42,489 | INFO     | chi2: 0.9270338686404596
[2025-06-05 17:41:56] 2025-06-05 21:41:42,489 | INFO     | current chi2=0.9270338686404596 (change=34.83195916690021 %)
[2025-06-05 17:41:56] 2025-06-05 21:41:42,490 | INFO     | sum of square deviations: 4179992308.2058754
[2025-06-05 17:41:56] 2025-06-05 21:41:42,491 | INFO     | sum of deviations: -21534261192.97058
[2025-06-05 17:41:56] 2025-06-05 21:41:42,492 | INFO     | mean x: 1749152428.6176472
[2025-06-05 17:41:56] 2025-06-05 21:41:42,492 | INFO     | mean y: 2494567.6596638653
[2025-06-05 17:41:56] 2025-06-05 21:41:42,492 | INFO     | -- intersect: 9013684657.705175
[2025-06-05 17:41:56] 2025-06-05 21:41:42,492 | INFO     | intersect: 9013684657.705175
[2025-06-05 17:41:56] 2025-06-05 21:41:42,497 | INFO     | chi2: 0.878869352221175
[2025-06-05 17:41:56] 2025-06-05 21:41:42,497 | INFO     | current chi2=0.878869352221175 (change=5.195550890704798 %)
[2025-06-05 17:41:56] 2025-06-05 21:41:42,497 | INFO     | left removable region: 30
[2025-06-05 17:41:56] 2025-06-05 21:41:42,498 | INFO     | sum of square deviations: 3168262436.562215
[2025-06-05 17:41:56] 2025-06-05 21:41:42,499 | INFO     | sum of deviations: -1254406019.5576007
[2025-06-05 17:41:56] 2025-06-05 21:41:42,499 | INFO     | mean x: 1749152703.105991
[2025-06-05 17:41:56] 2025-06-05 21:41:42,499 | INFO     | mean y: 2501438.198156682
[2025-06-05 17:41:56] 2025-06-05 21:41:42,500 | INFO     | -- intersect: 695041189.5081544
[2025-06-05 17:41:56] 2025-06-05 21:41:42,500 | INFO     | intersect: 695041189.5081544
[2025-06-05 17:41:56] 2025-06-05 21:41:42,500 | INFO     | chi2: 0.024255499879253642
[2025-06-05 17:41:56] 2025-06-05 21:41:42,500 | INFO     | -- intersect: 695041189.5081544
[2025-06-05 17:41:56] 2025-06-05 21:41:42,505 | INFO     | current memory leak: -0.40 B/s (using 217 data points, chi2=0.02)
[2025-06-05 17:41:56] 2025-06-05 21:41:42,505 | INFO     | ..............................
[2025-06-05 17:41:56] 2025-06-05 21:41:42,506 | INFO     | . Timing measurements:
[2025-06-05 17:41:56] 2025-06-05 21:41:42,506 | INFO     | . get job = 0 s
[2025-06-05 17:41:56] 2025-06-05 21:41:42,506 | INFO     | . initial setup = 7 s
[2025-06-05 17:41:56] 2025-06-05 21:41:42,506 | INFO     | . payload setup = 91 s
[2025-06-05 17:41:56] 2025-06-05 21:41:42,506 | INFO     | . stage-in = 0 s
[2025-06-05 17:41:56] 2025-06-05 21:41:42,506 | INFO     | . payload execution = 15464 s
[2025-06-05 17:41:56] 2025-06-05 21:41:42,506 | INFO     | . stage-out = 2 s
[2025-06-05 17:41:56] 2025-06-05 21:41:42,506 | INFO     | . log creation = 0 s
[2025-06-05 17:41:56] 2025-06-05 21:41:42,507 | INFO     | ..............................
[2025-06-05 17:41:56] 2025-06-05 21:41:43,085 | INFO     | 
[2025-06-05 17:41:56] 2025-06-05 21:41:43,085 | INFO     | job summary report
[2025-06-05 17:41:56] 2025-06-05 21:41:43,085 | INFO     | --------------------------------------------------
[2025-06-05 17:41:56] 2025-06-05 21:41:43,085 | INFO     | PanDA job id: 6668992069
[2025-06-05 17:41:56] 2025-06-05 21:41:43,085 | INFO     | task id: 44871837
[2025-06-05 17:41:56] 2025-06-05 21:41:43,085 | INFO     | errors: (none)
[2025-06-05 17:41:56] 2025-06-05 21:41:43,085 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 17:41:56] 2025-06-05 21:41:43,085 | INFO     | pilot state: finished 
[2025-06-05 17:41:56] 2025-06-05 21:41:43,085 | INFO     | transexitcode: 0
[2025-06-05 17:41:56] 2025-06-05 21:41:43,085 | INFO     | exeerrorcode: 0
[2025-06-05 17:41:56] 2025-06-05 21:41:43,085 | INFO     | exeerrordiag: 
[2025-06-05 17:41:56] 2025-06-05 21:41:43,085 | INFO     | exitcode: 0
[2025-06-05 17:41:56] 2025-06-05 21:41:43,085 | INFO     | exitmsg: OK
[2025-06-05 17:41:56] 2025-06-05 21:41:43,086 | INFO     | cpuconsumptiontime: 73366 s
[2025-06-05 17:41:56] 2025-06-05 21:41:43,086 | INFO     | nevents: 400
[2025-06-05 17:41:56] 2025-06-05 21:41:43,086 | INFO     | neventsw: 0
[2025-06-05 17:41:56] 2025-06-05 21:41:43,086 | INFO     | pid: 26761
[2025-06-05 17:41:56] 2025-06-05 21:41:43,086 | INFO     | pgrp: 26761
[2025-06-05 17:41:56] 2025-06-05 21:41:43,086 | INFO     | corecount: 8
[2025-06-05 17:41:56] 2025-06-05 21:41:43,086 | INFO     | event service: False
[2025-06-05 17:41:56] 2025-06-05 21:41:43,086 | INFO     | sizes: {0: 2397165, 1: 2397420, 12: 2397420, 23: 2397448, 34: 2397476, 36: 2397710, 44: 2397866, 15559: 2428795, 15562: 2437736, 15563: 2437792, 15570: 2437962}
[2025-06-05 17:41:56] 2025-06-05 21:41:43,086 | INFO     | --------------------------------------------------
[2025-06-05 17:41:56] 2025-06-05 21:41:43,086 | INFO     | 
[2025-06-05 17:41:56] 2025-06-05 21:41:43,086 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 17:41:56] 2025-06-05 21:41:43,105 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 17:41:56] 2025-06-05 21:41:43,106 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 17:41:56] 2025-06-05 21:41:43,106 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 17:41:56] 2025-06-05 21:41:43,106 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 17:41:56] 2025-06-05 21:41:43,106 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 17:41:56] 2025-06-05 21:41:43,106 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 17:41:56] 2025-06-05 21:41:43,106 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 17:41:56] 2025-06-05 21:41:43,106 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 17:41:56] 2025-06-05 21:41:43,106 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 17:41:56] 2025-06-05 21:41:43,106 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 17:41:56] 2025-06-05 21:41:43,106 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 17:41:56] 2025-06-05 21:41:43,106 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 17:41:56] 2025-06-05 21:41:43,107 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 17:41:56] 2025-06-05 21:41:43,107 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 17:41:56] 2025-06-05 21:41:43,107 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 17:41:56] 2025-06-05 21:41:43,107 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 17:41:56] 2025-06-05 21:41:43,107 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 17:41:56] 2025-06-05 21:41:43,107 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 17:41:56] 2025-06-05 21:41:43,107 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 17:41:56] 2025-06-05 21:41:43,107 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 17:41:56] 2025-06-05 21:41:43,107 | INFO     | job 6668992069 has completed (purged errors)
[2025-06-05 17:41:56] 2025-06-05 21:41:43,107 | INFO     | overall cleanup function is called
[2025-06-05 17:41:56] 2025-06-05 21:41:44,115 | INFO     | --- collectZombieJob: --- 10, [26761]
[2025-06-05 17:41:56] 2025-06-05 21:41:44,115 | INFO     | zombie collector waiting for pid 26761
[2025-06-05 17:41:56] 2025-06-05 21:41:44,132 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 17:41:56] 2025-06-05 21:41:44,132 | INFO     | collected zombie processes
[2025-06-05 17:41:56] 2025-06-05 21:41:44,132 | INFO     | will attempt to kill all subprocesses of pid=26761
[2025-06-05 17:41:56] 2025-06-05 21:41:44,390 | INFO     | process IDs to be killed: [26761] (in reverse order)
[2025-06-05 17:41:56] 2025-06-05 21:41:44,496 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 17:41:56] 2025-06-05 21:41:44,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 17:41:56] 2025-06-05 21:41:44,504 | INFO     | did not find any defunct processes belonging to 26761
[2025-06-05 17:41:56] 2025-06-05 21:41:44,510 | INFO     | did not find any defunct processes belonging to 26761
[2025-06-05 17:41:56] 2025-06-05 21:41:44,511 | INFO     | ready for new job
[2025-06-05 17:41:56] 2025-06-05 21:41:44,511 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 17:41:56] 2025-06-05 21:41:44,513 | INFO     | **************************************
[2025-06-05 17:41:56] 2025-06-05 21:41:44,513 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 17:41:56] 2025-06-05 21:41:44,513 | INFO     | **************************************
[2025-06-05 17:41:56] 2025-06-05 21:41:44,513 | INFO     | 
[2025-06-05 17:41:56] 2025-06-05 21:41:44,516 | INFO     | architecture information:
[2025-06-05 17:41:56] 2025-06-05 21:41:44,517 | INFO     | executing command: cat /etc/os-release
[2025-06-05 17:41:56] 2025-06-05 21:41:44,533 | INFO     | cat /etc/os-release:
[2025-06-05 17:41:56] NAME="CentOS Linux"
[2025-06-05 17:41:56] VERSION="7 (Core)"
[2025-06-05 17:41:56] ID="centos"
[2025-06-05 17:41:56] ID_LIKE="rhel fedora"
[2025-06-05 17:41:56] VERSION_ID="7"
[2025-06-05 17:41:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 17:41:56] ANSI_COLOR="0;31"
[2025-06-05 17:41:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 17:41:56] HOME_URL="https://www.centos.org/"
[2025-06-05 17:41:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 17:41:56] 
[2025-06-05 17:41:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 17:41:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 17:41:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 17:41:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 17:41:56] 
[2025-06-05 17:41:56] 2025-06-05 21:41:44,534 | INFO     | **************************************
[2025-06-05 17:41:56] 2025-06-05 21:41:45,036 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 17:41:56] 2025-06-05 21:41:45,059 | INFO     | sufficient remaining disk space (57029951488 B)
[2025-06-05 17:41:56] 2025-06-05 21:41:45,059 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 17:41:56] 2025-06-05 21:41:45,060 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 17:41:56] 2025-06-05 21:41:45,060 | INFO     | update_server=False
[2025-06-05 17:41:56] 2025-06-05 21:41:45,060 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 17:41:56] 2025-06-05 21:41:45,060 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:41:56] 2025-06-05 21:41:45,060 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 17:41:56] 2025-06-05 21:41:45,061 | INFO     | aborting loop
[2025-06-05 17:41:56] 2025-06-05 21:41:45,094 | INFO     | all payload control threads have been joined
[2025-06-05 17:41:56] 2025-06-05 21:41:45,660 | INFO     | all data control threads have been joined
[2025-06-05 17:41:56] 2025-06-05 21:41:45,977 | INFO     | all job control threads have been joined
[2025-06-05 17:41:56] 2025-06-05 21:41:46,027 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 17:41:56] 2025-06-05 21:41:46,027 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 17:41:56] 2025-06-05 21:41:46,027 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 17:41:56] 2025-06-05 21:41:46,064 | INFO     | [job] job monitor thread has finished
[2025-06-05 17:41:56] 2025-06-05 21:41:46,066 | INFO     | [job] retrieve thread has finished
[2025-06-05 17:41:56] 2025-06-05 21:41:46,100 | INFO     | [payload] control thread has finished
[2025-06-05 17:41:56] 2025-06-05 21:41:46,134 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 17:41:56] 2025-06-05 21:41:46,172 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 17:41:56] 2025-06-05 21:41:46,472 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 17:41:56] 2025-06-05 21:41:46,660 | INFO     | [data] control thread has finished
[2025-06-05 17:41:56] 2025-06-05 21:41:46,978 | INFO     | [job] control thread has finished
[2025-06-05 17:41:56] 2025-06-05 21:41:47,068 | INFO     | [data] copytool_out thread has finished
[2025-06-05 17:41:56] 2025-06-05 21:41:47,074 | INFO     | [payload] failed_post thread has finished
[2025-06-05 17:41:56] 2025-06-05 21:41:47,128 | INFO     | [job] validate thread has finished
[2025-06-05 17:41:56] 2025-06-05 21:41:47,169 | INFO     | [payload] validate_post thread has finished
[2025-06-05 17:41:56] 2025-06-05 21:41:47,251 | INFO     | [data] copytool_in thread has finished
[2025-06-05 17:41:56] 2025-06-05 21:41:47,475 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 17:41:56] 2025-06-05 21:41:47,534 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 17:41:56] 2025-06-05 21:41:47,654 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:41:56] 2025-06-05 21:41:48,660 | INFO     | [job] queue monitor thread has finished
[2025-06-05 17:41:56] 2025-06-05 21:41:50,173 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 17:41:56] 2025-06-05 21:41:51,150 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140612699060032)>', '<ExcThread(monitor, started 140612263212800)>']
[2025-06-05 17:41:56] 2025-06-05 21:41:52,077 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 17:41:56] 2025-06-05 21:41:52,078 | INFO     | [monitor] control thread has ended
[2025-06-05 17:41:56] 2025-06-05 21:41:56,177 | INFO     | all workflow threads have been joined
[2025-06-05 17:41:56] 2025-06-05 21:41:56,177 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 17:41:56] 2025-06-05 21:41:56,177 | INFO     | traces error code: 0
[2025-06-05 17:41:56] 2025-06-05 21:41:56,178 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 17:41:56] 2025-06-05 21:41:56,637 [wrapper] ==== pilot stdout END ====
[2025-06-05 17:41:56] 2025-06-05 21:41:56,645 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 17:41:56] 2025-06-05 21:41:56,654 [wrapper] pilotpid: 11821
[2025-06-05 17:41:56] 2025-06-05 21:41:56,661 [wrapper] Pilot exit status: 0
[2025-06-05 17:41:56] 2025-06-05 21:41:56,719 [wrapper] pandaids: 6668992069
[2025-06-05 17:41:56] 2025-06-05 21:41:56,788 [wrapper] cleanup supervisor_pilot 29120 11822
[2025-06-05 17:41:56] 2025-06-05 21:41:56,792 [wrapper] Test setup, not cleaning
[2025-06-05 17:41:56] 2025-06-05 21:41:56,795 [wrapper] apfmon messages muted
[2025-06-05 17:41:56] 2025-06-05 21:41:56,798 [wrapper] ==== wrapper stdout END ====
[2025-06-05 17:41:56] 2025-06-05 21:41:56,802 [wrapper] ==== wrapper stderr END ====
[2025-06-05 17:41:56]  *** Error codes and diagnostics ***
[2025-06-05 17:41:56]     "exeErrorCode": 0,
[2025-06-05 17:41:56]     "exeErrorDiag": "",
[2025-06-05 17:41:56]     "pilotErrorCode": 0,
[2025-06-05 17:41:56]     "pilotErrorDiag": "",
[2025-06-05 17:41:56]  *** Listing of results directory ***
[2025-06-05 17:41:56] total 414936
[2025-06-05 17:41:56] -rw-r--r-- 1 boincer umatlas    495897 May 28 19:59 pilot3.tar.gz
[2025-06-05 17:41:56] -rw-r--r-- 1 boincer umatlas      5111 May 28 20:02 queuedata.json
[2025-06-05 17:41:56] -rwx------ 1 boincer umatlas     37140 May 28 20:03 runpilot2-wrapper.sh
[2025-06-05 17:41:56] -rw-r--r-- 1 boincer umatlas       100 Jun  5 13:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 17:41:56] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 13:18 run_atlas
[2025-06-05 17:41:56] -rw-r--r-- 1 boincer umatlas       105 Jun  5 13:18 job.xml
[2025-06-05 17:41:56] -rw-r--r-- 2 boincer umatlas 221577579 Jun  5 13:19 EVNT.44871834._003587.pool.root.1
[2025-06-05 17:41:56] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 13:19 start_atlas.sh
[2025-06-05 17:41:56] drwxrwx--x 2 boincer umatlas      4096 Jun  5 13:19 shared
[2025-06-05 17:41:56] -rw-r--r-- 2 boincer umatlas    508872 Jun  5 13:19 input.tar.gz
[2025-06-05 17:41:56] -rw-r--r-- 1 boincer umatlas         0 Jun  5 13:19 boinc_lockfile
[2025-06-05 17:41:56] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 13:19 pandaJob.out
[2025-06-05 17:41:56] -rw------- 1 boincer umatlas    983229 Jun  5 13:20 agis_schedconf.cvmfs.json
[2025-06-05 17:41:56] drwx------ 4 boincer umatlas      4096 Jun  5 13:20 pilot3
[2025-06-05 17:41:56] -rw-r--r-- 1 boincer umatlas      6132 Jun  5 17:38 init_data.xml
[2025-06-05 17:41:56] -rw------- 1 boincer umatlas 195899138 Jun  5 17:40 HITS.44871837._092225.pool.root.1
[2025-06-05 17:41:56] -rw-r--r-- 1 boincer umatlas       531 Jun  5 17:40 boinc_task_state.xml
[2025-06-05 17:41:56] -rw------- 1 boincer umatlas        95 Jun  5 17:41 pilot_heartbeat.json
[2025-06-05 17:41:56] -rw------- 1 boincer umatlas      1061 Jun  5 17:41 memory_monitor_summary.json
[2025-06-05 17:41:56] -rw------- 1 boincer umatlas   1598969 Jun  5 17:41 agis_ddmendpoints.agis.ALL.json
[2025-06-05 17:41:56] -rw------- 1 boincer umatlas    408375 Jun  5 17:41 log.44871837._092225.job.log.tgz.1
[2025-06-05 17:41:56] -rw------- 1 boincer umatlas      7753 Jun  5 17:41 heartbeat.json
[2025-06-05 17:41:56] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 17:41 boinc_mmap_file
[2025-06-05 17:41:56] -rw-r--r-- 1 boincer umatlas        28 Jun  5 17:41 wrapper_checkpoint.txt
[2025-06-05 17:41:56] -rw------- 1 boincer umatlas      4353 Jun  5 17:41 pilotlog.txt
[2025-06-05 17:41:56] -rw------- 1 boincer umatlas   1382731 Jun  5 17:41 log.44871837._092225.job.log.1
[2025-06-05 17:41:56] -rw------- 1 boincer umatlas       357 Jun  5 17:41 output.list
[2025-06-05 17:41:56] -rw-r--r-- 1 boincer umatlas       620 Jun  5 17:41 runtime_log
[2025-06-05 17:41:56] -rw------- 1 boincer umatlas   1812480 Jun  5 17:41 result.tar.gz
[2025-06-05 17:41:56] -rw-r--r-- 1 boincer umatlas      8660 Jun  5 17:41 runtime_log.err
[2025-06-05 17:41:56] -rw------- 1 boincer umatlas       662 Jun  5 17:41 KzGMDmTvfe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmKLUKDmx0ltCo.diag
[2025-06-05 17:41:56] -rw-r--r-- 1 boincer umatlas     20901 Jun  5 17:41 stderr.txt
[2025-06-05 17:41:56] HITS file was successfully produced:
[2025-06-05 17:41:56] -rw------- 1 boincer umatlas 195899138 Jun  5 17:40 shared/HITS.pool.root.1
[2025-06-05 17:41:56]  *** Contents of shared directory: ***
[2025-06-05 17:41:56] total 409992
[2025-06-05 17:41:56] -rw-r--r-- 2 boincer umatlas 221577579 Jun  5 13:19 ATLAS.root_0
[2025-06-05 17:41:56] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 13:19 start_atlas.sh
[2025-06-05 17:41:56] -rw-r--r-- 2 boincer umatlas    508872 Jun  5 13:19 input.tar.gz
[2025-06-05 17:41:56] -rw------- 1 boincer umatlas 195899138 Jun  5 17:40 HITS.pool.root.1
[2025-06-05 17:41:56] -rw------- 1 boincer umatlas   1812480 Jun  5 17:41 result.tar.gz
17:41:58 (3398): run_atlas exited; CPU time 73794.126481
17:41:58 (3398): called boinc_finish(0)

</stderr_txt>
]]>

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