Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:19:24 (648376): wrapper (7.7.26015): starting
13:19:24 (648376): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 13:19:24] Arguments: --nthreads 8
[2025-06-05 13:19:24] Threads: 8
[2025-06-05 13:19:24] Checking for CVMFS
[2025-06-05 13:19:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 13:19:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 13:19:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 13:19:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 13:19:24] 2.12.6.0 3451353 24975 475804 146827 2 161 24568627 32935936 17195 16776704 0 140037709 99.726 102508432 26259 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 13:19:24] CVMFS is ok
[2025-06-05 13:19:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 13:19:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 13:19:24] Further information can be found at the LHC@home message board.
[2025-06-05 13:19:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 13:19:24] Checking for apptainer binary...
[2025-06-05 13:19:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 13:19:24] Running /usr/bin/apptainer --version
[2025-06-05 13:19:24] apptainer version 1.4.1-1.el9
[2025-06-05 13:19:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:19:24] c6-12-27-2.aglt2.org
[2025-06-05 13:19:24] apptainer works
[2025-06-05 13:19:24] Set ATHENA_PROC_NUMBER=8
[2025-06-05 13:19:24] Set ATHENA_CORE_NUMBER=8
[2025-06-05 13:19:24] Starting ATLAS job with PandaID=6668730750
[2025-06-05 13:19:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 15:19:26]  *** The last 200 lines of the pilot log: ***
[2025-06-05 15:19:26] 2025-06-05 19:19:05,755 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 15:19:26] 2025-06-05 19:19:05,755 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 15:19:26] 2025-06-05 19:19:05,755 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 15:19:26] 2025-06-05 19:19:05,755 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 15:19:26] 2025-06-05 19:19:05,757 | INFO     | fitting pss+swap vs Time
[2025-06-05 15:19:26] 2025-06-05 19:19:05,757 | INFO     | sum of square deviations: 496597218.0
[2025-06-05 15:19:26] 2025-06-05 19:19:05,758 | INFO     | sum of deviations: 8283232517.000002
[2025-06-05 15:19:26] 2025-06-05 19:19:05,758 | INFO     | mean x: 1749147538.0
[2025-06-05 15:19:26] 2025-06-05 19:19:05,758 | INFO     | mean y: 2187473.6324786325
[2025-06-05 15:19:26] 2025-06-05 19:19:05,758 | INFO     | -- intersect: -29173561480.708416
[2025-06-05 15:19:26] 2025-06-05 19:19:05,758 | INFO     | intersect: -29173561480.708416
[2025-06-05 15:19:26] 2025-06-05 19:19:05,758 | INFO     | chi2: 1.7270460864807788
[2025-06-05 15:19:26] 2025-06-05 19:19:05,758 | INFO     | sum of square deviations: 435610028.0
[2025-06-05 15:19:26] 2025-06-05 19:19:05,759 | INFO     | sum of deviations: 8146064348.5
[2025-06-05 15:19:26] 2025-06-05 19:19:05,759 | INFO     | mean x: 1749147385.5
[2025-06-05 15:19:26] 2025-06-05 19:19:05,759 | INFO     | mean y: 2187116.526785714
[2025-06-05 15:19:26] 2025-06-05 19:19:05,759 | INFO     | -- intersect: -32707498706.623123
[2025-06-05 15:19:26] 2025-06-05 19:19:05,759 | INFO     | intersect: -32707498706.623123
[2025-06-05 15:19:26] 2025-06-05 19:19:05,759 | INFO     | chi2: 1.7292338116853485
[2025-06-05 15:19:26] 2025-06-05 19:19:05,759 | INFO     | current chi2=1.7292338116853485 (change=-0.1266743963403791 %)
[2025-06-05 15:19:26] 2025-06-05 19:19:05,759 | INFO     | right removable region: 111
[2025-06-05 15:19:26] 2025-06-05 19:19:05,759 | INFO     | sum of square deviations: 435610028.0
[2025-06-05 15:19:26] 2025-06-05 19:19:05,759 | INFO     | sum of deviations: -9434910778.5
[2025-06-05 15:19:26] 2025-06-05 19:19:05,759 | INFO     | mean x: 1749147690.5
[2025-06-05 15:19:26] 2025-06-05 19:19:05,759 | INFO     | mean y: 2231127.2410714286
[2025-06-05 15:19:26] 2025-06-05 19:19:05,760 | INFO     | -- intersect: 37887154194.91396
[2025-06-05 15:19:26] 2025-06-05 19:19:05,760 | INFO     | intersect: 37887154194.91396
[2025-06-05 15:19:26] 2025-06-05 19:19:05,760 | INFO     | chi2: 0.10732244349955133
[2025-06-05 15:19:26] 2025-06-05 19:19:05,760 | INFO     | current chi2=0.10732244349955133 (change=93.78577998933176 %)
[2025-06-05 15:19:26] 2025-06-05 19:19:05,760 | INFO     | sum of square deviations: 379832238.0
[2025-06-05 15:19:26] 2025-06-05 19:19:05,760 | INFO     | sum of deviations: -10594614566.000002
[2025-06-05 15:19:26] 2025-06-05 19:19:05,760 | INFO     | mean x: 1749147843.0
[2025-06-05 15:19:26] 2025-06-05 19:19:05,760 | INFO     | mean y: 2234142.3271028036
[2025-06-05 15:19:26] 2025-06-05 19:19:05,760 | INFO     | -- intersect: 48791002871.15544
[2025-06-05 15:19:26] 2025-06-05 19:19:05,760 | INFO     | intersect: 48791002871.15544
[2025-06-05 15:19:26] 2025-06-05 19:19:05,760 | INFO     | chi2: 0.062412313232909605
[2025-06-05 15:19:26] 2025-06-05 19:19:05,760 | INFO     | current chi2=0.062412313232909605 (change=41.84598188619278 %)
[2025-06-05 15:19:26] 2025-06-05 19:19:05,761 | INFO     | sum of square deviations: 329031285.5
[2025-06-05 15:19:26] 2025-06-05 19:19:05,761 | INFO     | sum of deviations: -8987734845.5
[2025-06-05 15:19:26] 2025-06-05 19:19:05,761 | INFO     | mean x: 1749147995.5
[2025-06-05 15:19:26] 2025-06-05 19:19:05,761 | INFO     | mean y: 2229314.3039215687
[2025-06-05 15:19:26] 2025-06-05 19:19:05,761 | INFO     | -- intersect: 47781510744.038445
[2025-06-05 15:19:26] 2025-06-05 19:19:05,761 | INFO     | intersect: 47781510744.038445
[2025-06-05 15:19:26] 2025-06-05 19:19:05,761 | INFO     | chi2: 0.062016959885764306
[2025-06-05 15:19:26] 2025-06-05 19:19:05,761 | INFO     | current chi2=0.062016959885764306 (change=0.6334540840842163 %)
[2025-06-05 15:19:26] 2025-06-05 19:19:05,761 | INFO     | left removable region: 30
[2025-06-05 15:19:26] 2025-06-05 19:19:05,761 | INFO     | sum of square deviations: 164765880.0
[2025-06-05 15:19:26] 2025-06-05 19:19:05,762 | INFO     | sum of deviations: -3743291047.0000005
[2025-06-05 15:19:26] 2025-06-05 19:19:05,762 | INFO     | mean x: 1749148270.0
[2025-06-05 15:19:26] 2025-06-05 19:19:05,762 | INFO     | mean y: 2211468.4938271604
[2025-06-05 15:19:26] 2025-06-05 19:19:05,762 | INFO     | -- intersect: 39740845820.25731
[2025-06-05 15:19:26] 2025-06-05 19:19:05,762 | INFO     | intersect: 39740845820.25731
[2025-06-05 15:19:26] 2025-06-05 19:19:05,762 | INFO     | chi2: 0.048689072371241586
[2025-06-05 15:19:26] 2025-06-05 19:19:05,762 | INFO     | -- intersect: 39740845820.25731
[2025-06-05 15:19:26] 2025-06-05 19:19:05,762 | INFO     | current memory leak: -22.72 B/s (using 81 data points, chi2=0.05)
[2025-06-05 15:19:26] 2025-06-05 19:19:05,762 | INFO     | ..............................
[2025-06-05 15:19:26] 2025-06-05 19:19:05,762 | INFO     | . Timing measurements:
[2025-06-05 15:19:26] 2025-06-05 19:19:05,762 | INFO     | . get job = 0 s
[2025-06-05 15:19:26] 2025-06-05 19:19:05,763 | INFO     | . initial setup = 2 s
[2025-06-05 15:19:26] 2025-06-05 19:19:05,763 | INFO     | . payload setup = 6 s
[2025-06-05 15:19:26] 2025-06-05 19:19:05,763 | INFO     | . stage-in = 0 s
[2025-06-05 15:19:26] 2025-06-05 19:19:05,763 | INFO     | . payload execution = 7139 s
[2025-06-05 15:19:26] 2025-06-05 19:19:05,763 | INFO     | . stage-out = 0 s
[2025-06-05 15:19:26] 2025-06-05 19:19:05,763 | INFO     | . log creation = 0 s
[2025-06-05 15:19:26] 2025-06-05 19:19:05,763 | INFO     | ..............................
[2025-06-05 15:19:26] 2025-06-05 19:19:05,885 | INFO     | 
[2025-06-05 15:19:26] 2025-06-05 19:19:05,885 | INFO     | job summary report
[2025-06-05 15:19:26] 2025-06-05 19:19:05,885 | INFO     | --------------------------------------------------
[2025-06-05 15:19:26] 2025-06-05 19:19:05,885 | INFO     | PanDA job id: 6668730750
[2025-06-05 15:19:26] 2025-06-05 19:19:05,885 | INFO     | task id: 44871837
[2025-06-05 15:19:26] 2025-06-05 19:19:05,885 | INFO     | errors: (none)
[2025-06-05 15:19:26] 2025-06-05 19:19:05,886 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 15:19:26] 2025-06-05 19:19:05,886 | INFO     | pilot state: finished 
[2025-06-05 15:19:26] 2025-06-05 19:19:05,886 | INFO     | transexitcode: 0
[2025-06-05 15:19:26] 2025-06-05 19:19:05,886 | INFO     | exeerrorcode: 0
[2025-06-05 15:19:26] 2025-06-05 19:19:05,886 | INFO     | exeerrordiag: 
[2025-06-05 15:19:26] 2025-06-05 19:19:05,886 | INFO     | exitcode: 0
[2025-06-05 15:19:26] 2025-06-05 19:19:05,886 | INFO     | exitmsg: OK
[2025-06-05 15:19:26] 2025-06-05 19:19:05,886 | INFO     | cpuconsumptiontime: 50187 s
[2025-06-05 15:19:26] 2025-06-05 19:19:05,886 | INFO     | nevents: 400
[2025-06-05 15:19:26] 2025-06-05 19:19:05,886 | INFO     | neventsw: 0
[2025-06-05 15:19:26] 2025-06-05 19:19:05,886 | INFO     | pid: 669660
[2025-06-05 15:19:26] 2025-06-05 19:19:05,886 | INFO     | pgrp: 669660
[2025-06-05 15:19:26] 2025-06-05 19:19:05,886 | INFO     | corecount: 8
[2025-06-05 15:19:26] 2025-06-05 19:19:05,886 | INFO     | event service: False
[2025-06-05 15:19:26] 2025-06-05 19:19:05,886 | INFO     | sizes: {0: 2397221, 1: 2397420, 5: 2397626, 11: 2397682, 7149: 2424954, 7150: 2433895, 7153: 2434079, 7157: 2434249}
[2025-06-05 15:19:26] 2025-06-05 19:19:05,886 | INFO     | --------------------------------------------------
[2025-06-05 15:19:26] 2025-06-05 19:19:05,886 | INFO     | 
[2025-06-05 15:19:26] 2025-06-05 19:19:05,886 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 15:19:26] 2025-06-05 19:19:05,900 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 15:19:26] 2025-06-05 19:19:05,901 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 15:19:26] 2025-06-05 19:19:05,901 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 15:19:26] 2025-06-05 19:19:05,901 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 15:19:26] 2025-06-05 19:19:05,901 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 15:19:26] 2025-06-05 19:19:05,901 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 15:19:26] 2025-06-05 19:19:05,901 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 15:19:26] 2025-06-05 19:19:05,901 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 15:19:26] 2025-06-05 19:19:05,901 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 15:19:26] 2025-06-05 19:19:05,901 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 15:19:26] 2025-06-05 19:19:05,901 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 15:19:26] 2025-06-05 19:19:05,901 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 15:19:26] 2025-06-05 19:19:05,901 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 15:19:26] 2025-06-05 19:19:05,901 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 15:19:26] 2025-06-05 19:19:05,901 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 15:19:26] 2025-06-05 19:19:05,901 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 15:19:26] 2025-06-05 19:19:05,901 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 15:19:26] 2025-06-05 19:19:05,901 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 15:19:26] 2025-06-05 19:19:05,901 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 15:19:26] 2025-06-05 19:19:05,901 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 15:19:26] 2025-06-05 19:19:05,902 | INFO     | job 6668730750 has completed (purged errors)
[2025-06-05 15:19:26] 2025-06-05 19:19:05,902 | INFO     | overall cleanup function is called
[2025-06-05 15:19:26] 2025-06-05 19:19:06,908 | INFO     | --- collectZombieJob: --- 10, [669660]
[2025-06-05 15:19:26] 2025-06-05 19:19:06,909 | INFO     | zombie collector waiting for pid 669660
[2025-06-05 15:19:26] 2025-06-05 19:19:06,909 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 15:19:26] 2025-06-05 19:19:06,909 | INFO     | collected zombie processes
[2025-06-05 15:19:26] 2025-06-05 19:19:06,909 | INFO     | will attempt to kill all subprocesses of pid=669660
[2025-06-05 15:19:26] 2025-06-05 19:19:07,218 | INFO     | process IDs to be killed: [669660] (in reverse order)
[2025-06-05 15:19:26] 2025-06-05 19:19:07,309 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 15:19:26] 2025-06-05 19:19:07,310 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 15:19:26] 2025-06-05 19:19:07,322 | INFO     | did not find any defunct processes belonging to 669660
[2025-06-05 15:19:26] 2025-06-05 19:19:07,335 | INFO     | did not find any defunct processes belonging to 669660
[2025-06-05 15:19:26] 2025-06-05 19:19:07,335 | INFO     | ready for new job
[2025-06-05 15:19:26] 2025-06-05 19:19:07,335 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 15:19:26] 2025-06-05 19:19:07,337 | INFO     | **************************************
[2025-06-05 15:19:26] 2025-06-05 19:19:07,337 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 15:19:26] 2025-06-05 19:19:07,337 | INFO     | **************************************
[2025-06-05 15:19:26] 2025-06-05 19:19:07,337 | INFO     | 
[2025-06-05 15:19:26] 2025-06-05 19:19:07,355 | INFO     | architecture information:
[2025-06-05 15:19:26] 2025-06-05 19:19:07,356 | INFO     | executing command: cat /etc/os-release
[2025-06-05 15:19:26] 2025-06-05 19:19:07,371 | INFO     | cat /etc/os-release:
[2025-06-05 15:19:26] NAME="CentOS Linux"
[2025-06-05 15:19:26] VERSION="7 (Core)"
[2025-06-05 15:19:26] ID="centos"
[2025-06-05 15:19:26] ID_LIKE="rhel fedora"
[2025-06-05 15:19:26] VERSION_ID="7"
[2025-06-05 15:19:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 15:19:26] ANSI_COLOR="0;31"
[2025-06-05 15:19:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 15:19:26] HOME_URL="https://www.centos.org/"
[2025-06-05 15:19:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 15:19:26] 
[2025-06-05 15:19:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 15:19:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 15:19:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 15:19:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 15:19:26] 
[2025-06-05 15:19:26] 2025-06-05 19:19:07,372 | INFO     | **************************************
[2025-06-05 15:19:26] 2025-06-05 19:19:07,874 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 15:19:26] 2025-06-05 19:19:07,890 | INFO     | sufficient remaining disk space (95961481216 B)
[2025-06-05 15:19:26] 2025-06-05 19:19:07,891 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 15:19:26] 2025-06-05 19:19:07,891 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 15:19:26] 2025-06-05 19:19:07,891 | INFO     | update_server=False
[2025-06-05 15:19:26] 2025-06-05 19:19:07,891 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 15:19:26] 2025-06-05 19:19:07,891 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 15:19:26] 2025-06-05 19:19:07,891 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:19:26] 2025-06-05 19:19:07,892 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 15:19:26] 2025-06-05 19:19:07,892 | INFO     | aborting loop
[2025-06-05 15:19:26] 2025-06-05 19:19:08,333 | INFO     | all job control threads have been joined
[2025-06-05 15:19:26] 2025-06-05 19:19:08,432 | INFO     | all data control threads have been joined
[2025-06-05 15:19:26] 2025-06-05 19:19:08,896 | INFO     | [job] retrieve thread has finished
[2025-06-05 15:19:26] 2025-06-05 19:19:08,898 | INFO     | [job] job monitor thread has finished
[2025-06-05 15:19:26] 2025-06-05 19:19:08,902 | INFO     | PID=653448 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 15:19:26] 2025-06-05 19:19:08,902 | INFO     | .. there are 12 such processes running
[2025-06-05 15:19:26] 2025-06-05 19:19:08,902 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 15:19:26] 2025-06-05 19:19:08,902 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 15:19:26] 2025-06-05 19:19:08,902 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 15:19:26] 2025-06-05 19:19:08,933 | INFO     | all payload control threads have been joined
[2025-06-05 15:19:26] 2025-06-05 19:19:09,022 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 15:19:26] 2025-06-05 19:19:09,255 | INFO     | [data] copytool_in thread has finished
[2025-06-05 15:19:26] 2025-06-05 19:19:09,338 | INFO     | [job] control thread has finished
[2025-06-05 15:19:26] 2025-06-05 19:19:09,339 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 15:19:26] 2025-06-05 19:19:09,437 | INFO     | [data] control thread has finished
[2025-06-05 15:19:26] 2025-06-05 19:19:09,807 | INFO     | [job] validate thread has finished
[2025-06-05 15:19:26] 2025-06-05 19:19:09,897 | INFO     | [data] copytool_out thread has finished
[2025-06-05 15:19:26] 2025-06-05 19:19:09,913 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 15:19:26] 2025-06-05 19:19:09,939 | INFO     | [payload] control thread has finished
[2025-06-05 15:19:26] 2025-06-05 19:19:10,351 | INFO     | [payload] validate_post thread has finished
[2025-06-05 15:19:26] 2025-06-05 19:19:10,494 | INFO     | [payload] failed_post thread has finished
[2025-06-05 15:19:26] 2025-06-05 19:19:10,825 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:19:26] 2025-06-05 19:19:11,831 | INFO     | [job] queue monitor thread has finished
[2025-06-05 15:19:26] 2025-06-05 19:19:11,897 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 15:19:26] 2025-06-05 19:19:18,490 | INFO     | job.realtimelogging is not enabled
[2025-06-05 15:19:26] 2025-06-05 19:19:19,496 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 15:19:26] 2025-06-05 19:19:20,726 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140261921339200)>', '<ExcThread(monitor, started 140261216745216)>']
[2025-06-05 15:19:26] 2025-06-05 19:19:20,962 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 15:19:26] 2025-06-05 19:19:20,963 | INFO     | [monitor] control thread has ended
[2025-06-05 15:19:26] 2025-06-05 19:19:25,751 | INFO     | all workflow threads have been joined
[2025-06-05 15:19:26] 2025-06-05 19:19:25,751 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 15:19:26] 2025-06-05 19:19:25,752 | INFO     | traces error code: 0
[2025-06-05 15:19:26] 2025-06-05 19:19:25,752 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 15:19:26] 2025-06-05 19:19:25,926 [wrapper] ==== pilot stdout END ====
[2025-06-05 15:19:26] 2025-06-05 19:19:25,928 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 15:19:26] 2025-06-05 19:19:25,930 [wrapper] pilotpid: 653448
[2025-06-05 15:19:26] 2025-06-05 19:19:25,932 [wrapper] Pilot exit status: 0
[2025-06-05 15:19:26] 2025-06-05 19:19:25,941 [wrapper] pandaids: 6668730750
[2025-06-05 15:19:26] 2025-06-05 19:19:25,997 [wrapper] cleanup supervisor_pilot  833452 653449
[2025-06-05 15:19:26] 2025-06-05 19:19:25,999 [wrapper] Test setup, not cleaning
[2025-06-05 15:19:26] 2025-06-05 19:19:26,001 [wrapper] apfmon messages muted
[2025-06-05 15:19:26] 2025-06-05 19:19:26,002 [wrapper] ==== wrapper stdout END ====
[2025-06-05 15:19:26] 2025-06-05 19:19:26,004 [wrapper] ==== wrapper stderr END ====
[2025-06-05 15:19:26]  *** Error codes and diagnostics ***
[2025-06-05 15:19:26]     "exeErrorCode": 0,
[2025-06-05 15:19:26]     "exeErrorDiag": "",
[2025-06-05 15:19:26]     "pilotErrorCode": 0,
[2025-06-05 15:19:26]     "pilotErrorDiag": "",
[2025-06-05 15:19:26]  *** Listing of results directory ***
[2025-06-05 15:19:26] total 417204
[2025-06-05 15:19:26] -rw-r--r--. 1 boincer umatlas    495897 May 28 13:58 pilot3.tar.gz
[2025-06-05 15:19:26] -rw-r--r--. 1 boincer umatlas      5111 May 28 14:05 queuedata.json
[2025-06-05 15:19:26] -rwx------. 1 boincer umatlas     37140 May 28 14:06 runpilot2-wrapper.sh
[2025-06-05 15:19:26] -rw-r--r--. 1 boincer umatlas       100 Jun  5 13:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 15:19:26] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 13:19 run_atlas
[2025-06-05 15:19:26] -rw-r--r--. 1 boincer umatlas       105 Jun  5 13:19 job.xml
[2025-06-05 15:19:26] -rw-r--r--. 2 boincer umatlas 225573968 Jun  5 13:19 EVNT.44871834._003438.pool.root.1
[2025-06-05 15:19:26] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 13:19 shared
[2025-06-05 15:19:26] -rw-r--r--. 2 boincer umatlas    508880 Jun  5 13:19 input.tar.gz
[2025-06-05 15:19:26] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 13:19 start_atlas.sh
[2025-06-05 15:19:26] -rw-r--r--. 1 boincer umatlas         0 Jun  5 13:19 boinc_lockfile
[2025-06-05 15:19:26] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 13:19 pandaJob.out
[2025-06-05 15:19:26] -rw-------. 1 boincer umatlas    983229 Jun  5 13:19 agis_schedconf.cvmfs.json
[2025-06-05 15:19:26] -rw-------. 1 boincer umatlas   1598969 Jun  5 13:19 agis_ddmendpoints.agis.ALL.json
[2025-06-05 15:19:26] drwx------. 4 boincer umatlas      4096 Jun  5 13:19 pilot3
[2025-06-05 15:19:26] -rw-r--r--. 1 boincer umatlas      6859 Jun  5 15:11 init_data.xml
[2025-06-05 15:19:26] -rw-------. 1 boincer umatlas 195848033 Jun  5 15:18 HITS.44871837._088298.pool.root.1
[2025-06-05 15:19:26] -rw-r--r--. 1 boincer umatlas       530 Jun  5 15:18 boinc_task_state.xml
[2025-06-05 15:19:26] -rw-------. 1 boincer umatlas        95 Jun  5 15:18 pilot_heartbeat.json
[2025-06-05 15:19:26] -rw-------. 1 boincer umatlas      1040 Jun  5 15:18 memory_monitor_summary.json
[2025-06-05 15:19:26] -rw-------. 1 boincer umatlas    319030 Jun  5 15:18 log.44871837._088298.job.log.tgz.1
[2025-06-05 15:19:26] -rw-------. 1 boincer umatlas      7724 Jun  5 15:19 heartbeat.json
[2025-06-05 15:19:26] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 15:19 boinc_mmap_file
[2025-06-05 15:19:26] -rw-r--r--. 1 boincer umatlas        27 Jun  5 15:19 wrapper_checkpoint.txt
[2025-06-05 15:19:26] -rw-------. 1 boincer umatlas      4820 Jun  5 15:19 pilotlog.txt
[2025-06-05 15:19:26] -rw-------. 1 boincer umatlas    667392 Jun  5 15:19 log.44871837._088298.job.log.1
[2025-06-05 15:19:26] -rw-------. 1 boincer umatlas       357 Jun  5 15:19 output.list
[2025-06-05 15:19:26] -rw-r--r--. 1 boincer umatlas       620 Jun  5 15:19 runtime_log
[2025-06-05 15:19:26] -rw-------. 1 boincer umatlas   1003520 Jun  5 15:19 result.tar.gz
[2025-06-05 15:19:26] -rw-------. 1 boincer umatlas       654 Jun  5 15:19 WEmKDmmLae7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmflcKDmbDqsGn.diag
[2025-06-05 15:19:26] -rw-r--r--. 1 boincer umatlas      8669 Jun  5 15:19 runtime_log.err
[2025-06-05 15:19:26] -rw-r--r--. 1 boincer umatlas     20875 Jun  5 15:19 stderr.txt
[2025-06-05 15:19:26] HITS file was successfully produced:
[2025-06-05 15:19:26] -rw-------. 1 boincer umatlas 195848033 Jun  5 15:18 shared/HITS.pool.root.1
[2025-06-05 15:19:26]  *** Contents of shared directory: ***
[2025-06-05 15:19:26] total 413048
[2025-06-05 15:19:26] -rw-r--r--. 2 boincer umatlas 225573968 Jun  5 13:19 ATLAS.root_0
[2025-06-05 15:19:26] -rw-r--r--. 2 boincer umatlas    508880 Jun  5 13:19 input.tar.gz
[2025-06-05 15:19:26] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 13:19 start_atlas.sh
[2025-06-05 15:19:26] -rw-------. 1 boincer umatlas 195848033 Jun  5 15:18 HITS.pool.root.1
[2025-06-05 15:19:26] -rw-------. 1 boincer umatlas   1003520 Jun  5 15:19 result.tar.gz
15:19:27 (648376): run_atlas exited; CPU time 50424.192366
15:19:27 (648376): called boinc_finish(0)

</stderr_txt>
]]>

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