Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:19:10 (1243355): wrapper (7.7.26015): starting
13:19:10 (1243355): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 13:19:10] Arguments: --nthreads 8
[2025-06-05 13:19:10] Threads: 8
[2025-06-05 13:19:10] Checking for CVMFS
[2025-06-05 13:19:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 13:19:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 13:19:10] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 13:19:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 13:19:11] 2.12.6.0 2939844 24977 502104 146827 3 12 21536759 40960001 11963 16776704 1 130662767 99.694 109442253 27955 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 13:19:11] CVMFS is ok
[2025-06-05 13:19:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 13:19:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 13:19:11] Further information can be found at the LHC@home message board.
[2025-06-05 13:19:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 13:19:11] Checking for apptainer binary...
[2025-06-05 13:19:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 13:19:11] Running /usr/bin/apptainer --version
[2025-06-05 13:19:11] apptainer version 1.4.1-1.el9
[2025-06-05 13:19:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:19:11] c7-11-15.aglt2.org
[2025-06-05 13:19:11] apptainer works
[2025-06-05 13:19:11] Set ATHENA_PROC_NUMBER=8
[2025-06-05 13:19:11] Set ATHENA_CORE_NUMBER=8
[2025-06-05 13:19:11] Starting ATLAS job with PandaID=6668689257
[2025-06-05 13:19:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 14:50:43]  *** The last 200 lines of the pilot log: ***
[2025-06-05 14:50:43]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 14:50:43]  is_altstaged=None
[2025-06-05 14:50:43]  is_tar=False
[2025-06-05 14:50:43]  lfn=log.44871837._087395.job.log.tgz.1
[2025-06-05 14:50:43]  mtime=0
[2025-06-05 14:50:43]  protocol_id=None
[2025-06-05 14:50:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 14:50:43]  replicas=None
[2025-06-05 14:50:43]  scope=mc23_13p6TeV
[2025-06-05 14:50:43]  status=None
[2025-06-05 14:50:43]  status_code=0
[2025-06-05 14:50:43]  storage_token=
[2025-06-05 14:50:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668689257/log.44871837._087395.job.log.tgz.1
[2025-06-05 14:50:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/e9/log.44871837._087395.job.log.tgz.1
[2025-06-05 14:50:43]  workdir=None
[2025-06-05 14:50:43] ]
[2025-06-05 14:50:43] 2025-06-05 18:50:15,814 | INFO     | transferring file log.44871837._087395.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668689257/log.44871837._087395.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 14:50:43] 2025-06-05 18:50:15,814 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668689257/log.44871837._087395.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._087395.job
[2025-06-05 14:50:43] 2025-06-05 18:50:15,834 | INFO     | adding to output.list: log.44871837._087395.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/e9/log.44871837._087395.job.log.tg
[2025-06-05 14:50:43] 2025-06-05 18:50:15,835 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 14:50:43] 2025-06-05 18:50:15,835 | INFO     | summary of transferred files:
[2025-06-05 14:50:43] 2025-06-05 18:50:15,835 | INFO     |  -- lfn=log.44871837._087395.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 14:50:43] 2025-06-05 18:50:15,836 | INFO     | stage-out finished correctly
[2025-06-05 14:50:43] 2025-06-05 18:50:16,509 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 14:50:43] 2025-06-05 18:50:17,964 | INFO     | monitor loop #404: job 0:6668689257 is in state 'finished'
[2025-06-05 14:50:43] 2025-06-05 18:50:17,964 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:50:43] 2025-06-05 18:50:19,018 | INFO     | job 6668689257 has state=finished
[2025-06-05 14:50:43] 2025-06-05 18:50:19,018 | INFO     | preparing for final server update for job 6668689257 in state='finished'
[2025-06-05 14:50:43] 2025-06-05 18:50:19,018 | INFO     | this job has now completed (state=finished)
[2025-06-05 14:50:43] 2025-06-05 18:50:19,019 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 14:50:43] 2025-06-05 18:50:19,019 | INFO     | log transfer has been attempted: DONE
[2025-06-05 14:50:43] 2025-06-05 18:50:19,019 | INFO     | job 6668689257 has finished - writing final server update
[2025-06-05 14:50:43] 2025-06-05 18:50:19,019 | INFO     | total number of processed events: 400 (read)
[2025-06-05 14:50:43] 2025-06-05 18:50:19,035 | INFO     | executing command: lscpu
[2025-06-05 14:50:43] 2025-06-05 18:50:19,109 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 14:50:43] 2025-06-05 18:50:20,467 | INFO     | monitor loop #405: job 0:6668689257 is in state 'finished'
[2025-06-05 14:50:43] 2025-06-05 18:50:20,468 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:50:43] 2025-06-05 18:50:22,075 | INFO     | PID=1246996 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 14:50:43] 2025-06-05 18:50:22,075 | INFO     | .. there are 15 such processes running
[2025-06-05 14:50:43] 2025-06-05 18:50:22,572 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 14:50:43] 2025-06-05 18:50:22,573 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668689257/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 14:50:43] 2025-06-05 18:50:22,573 | INFO     | extracted standard info from prmon json
[2025-06-05 14:50:43] 2025-06-05 18:50:22,573 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 14:50:43] 2025-06-05 18:50:22,574 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 14:50:43] 2025-06-05 18:50:22,574 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 14:50:43] 2025-06-05 18:50:22,574 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 14:50:43] 2025-06-05 18:50:22,575 | INFO     | fitting pss+swap vs Time
[2025-06-05 14:50:43] 2025-06-05 18:50:22,575 | INFO     | sum of square deviations: 170944600.5
[2025-06-05 14:50:43] 2025-06-05 18:50:22,576 | INFO     | sum of deviations: -7531557668.500001
[2025-06-05 14:50:43] 2025-06-05 18:50:22,576 | INFO     | mean x: 1749146763.5
[2025-06-05 14:50:43] 2025-06-05 18:50:22,576 | INFO     | mean y: 2266138.963414634
[2025-06-05 14:50:43] 2025-06-05 18:50:22,576 | INFO     | -- intersect: 77066997528.18552
[2025-06-05 14:50:43] 2025-06-05 18:50:22,576 | INFO     | intersect: 77066997528.18552
[2025-06-05 14:50:43] 2025-06-05 18:50:22,576 | INFO     | chi2: 0.0667985597809295
[2025-06-05 14:50:43] 2025-06-05 18:50:22,576 | INFO     | -- intersect: 77066997528.18552
[2025-06-05 14:50:43] 2025-06-05 18:50:22,576 | INFO     | current memory leak: -44.06 B/s (using 82 data points, chi2=0.07)
[2025-06-05 14:50:43] 2025-06-05 18:50:22,577 | INFO     | ..............................
[2025-06-05 14:50:43] 2025-06-05 18:50:22,577 | INFO     | . Timing measurements:
[2025-06-05 14:50:43] 2025-06-05 18:50:22,577 | INFO     | . get job = 0 s
[2025-06-05 14:50:43] 2025-06-05 18:50:22,577 | INFO     | . initial setup = 2 s
[2025-06-05 14:50:43] 2025-06-05 18:50:22,577 | INFO     | . payload setup = 6 s
[2025-06-05 14:50:43] 2025-06-05 18:50:22,577 | INFO     | . stage-in = 0 s
[2025-06-05 14:50:43] 2025-06-05 18:50:22,577 | INFO     | . payload execution = 5428 s
[2025-06-05 14:50:43] 2025-06-05 18:50:22,577 | INFO     | . stage-out = 0 s
[2025-06-05 14:50:43] 2025-06-05 18:50:22,577 | INFO     | . log creation = 0 s
[2025-06-05 14:50:43] 2025-06-05 18:50:22,577 | INFO     | ..............................
[2025-06-05 14:50:43] 2025-06-05 18:50:23,003 | INFO     | 
[2025-06-05 14:50:43] 2025-06-05 18:50:23,003 | INFO     | job summary report
[2025-06-05 14:50:43] 2025-06-05 18:50:23,003 | INFO     | --------------------------------------------------
[2025-06-05 14:50:43] 2025-06-05 18:50:23,003 | INFO     | PanDA job id: 6668689257
[2025-06-05 14:50:43] 2025-06-05 18:50:23,003 | INFO     | task id: 44871837
[2025-06-05 14:50:43] 2025-06-05 18:50:23,003 | INFO     | errors: (none)
[2025-06-05 14:50:43] 2025-06-05 18:50:23,004 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 14:50:43] 2025-06-05 18:50:23,004 | INFO     | pilot state: finished 
[2025-06-05 14:50:43] 2025-06-05 18:50:23,004 | INFO     | transexitcode: 0
[2025-06-05 14:50:43] 2025-06-05 18:50:23,004 | INFO     | exeerrorcode: 0
[2025-06-05 14:50:43] 2025-06-05 18:50:23,004 | INFO     | exeerrordiag: 
[2025-06-05 14:50:43] 2025-06-05 18:50:23,004 | INFO     | exitcode: 0
[2025-06-05 14:50:43] 2025-06-05 18:50:23,004 | INFO     | exitmsg: OK
[2025-06-05 14:50:43] 2025-06-05 18:50:23,004 | INFO     | cpuconsumptiontime: 38538 s
[2025-06-05 14:50:43] 2025-06-05 18:50:23,004 | INFO     | nevents: 400
[2025-06-05 14:50:43] 2025-06-05 18:50:23,004 | INFO     | neventsw: 0
[2025-06-05 14:50:43] 2025-06-05 18:50:23,004 | INFO     | pid: 1259033
[2025-06-05 14:50:43] 2025-06-05 18:50:23,004 | INFO     | pgrp: 1259033
[2025-06-05 14:50:43] 2025-06-05 18:50:23,004 | INFO     | corecount: 8
[2025-06-05 14:50:43] 2025-06-05 18:50:23,004 | INFO     | event service: False
[2025-06-05 14:50:43] 2025-06-05 18:50:23,004 | INFO     | sizes: {0: 2397392, 4: 2397598, 11: 2397626, 5438: 2424184, 5439: 2433125, 5440: 2433181, 5446: 2433479}
[2025-06-05 14:50:43] 2025-06-05 18:50:23,004 | INFO     | --------------------------------------------------
[2025-06-05 14:50:43] 2025-06-05 18:50:23,004 | INFO     | 
[2025-06-05 14:50:43] 2025-06-05 18:50:23,005 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 14:50:43] 2025-06-05 18:50:23,023 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 14:50:43] 2025-06-05 18:50:23,023 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 14:50:43] 2025-06-05 18:50:23,023 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 14:50:43] 2025-06-05 18:50:23,023 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 14:50:43] 2025-06-05 18:50:23,023 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 14:50:43] 2025-06-05 18:50:23,024 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 14:50:43] 2025-06-05 18:50:23,024 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 14:50:43] 2025-06-05 18:50:23,024 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 14:50:43] 2025-06-05 18:50:23,024 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 14:50:43] 2025-06-05 18:50:23,024 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 14:50:43] 2025-06-05 18:50:23,024 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 14:50:43] 2025-06-05 18:50:23,024 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 14:50:43] 2025-06-05 18:50:23,024 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 14:50:43] 2025-06-05 18:50:23,024 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 14:50:43] 2025-06-05 18:50:23,024 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 14:50:43] 2025-06-05 18:50:23,024 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 14:50:43] 2025-06-05 18:50:23,024 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 14:50:43] 2025-06-05 18:50:23,024 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 14:50:43] 2025-06-05 18:50:23,024 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 14:50:43] 2025-06-05 18:50:23,024 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 14:50:43] 2025-06-05 18:50:23,025 | INFO     | job 6668689257 has completed (purged errors)
[2025-06-05 14:50:43] 2025-06-05 18:50:23,025 | INFO     | overall cleanup function is called
[2025-06-05 14:50:43] 2025-06-05 18:50:24,033 | INFO     | --- collectZombieJob: --- 10, [1259033]
[2025-06-05 14:50:43] 2025-06-05 18:50:24,033 | INFO     | zombie collector waiting for pid 1259033
[2025-06-05 14:50:43] 2025-06-05 18:50:24,033 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 14:50:43] 2025-06-05 18:50:24,033 | INFO     | collected zombie processes
[2025-06-05 14:50:43] 2025-06-05 18:50:24,033 | INFO     | will attempt to kill all subprocesses of pid=1259033
[2025-06-05 14:50:43] 2025-06-05 18:50:24,251 | INFO     | process IDs to be killed: [1259033] (in reverse order)
[2025-06-05 14:50:43] 2025-06-05 18:50:24,334 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 14:50:43] 2025-06-05 18:50:24,335 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 14:50:43] 2025-06-05 18:50:24,344 | INFO     | did not find any defunct processes belonging to 1259033
[2025-06-05 14:50:43] 2025-06-05 18:50:24,352 | INFO     | did not find any defunct processes belonging to 1259033
[2025-06-05 14:50:43] 2025-06-05 18:50:24,352 | INFO     | ready for new job
[2025-06-05 14:50:43] 2025-06-05 18:50:24,352 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 14:50:43] 2025-06-05 18:50:24,353 | INFO     | **************************************
[2025-06-05 14:50:43] 2025-06-05 18:50:24,353 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 14:50:43] 2025-06-05 18:50:24,353 | INFO     | **************************************
[2025-06-05 14:50:43] 2025-06-05 18:50:24,353 | INFO     | 
[2025-06-05 14:50:43] 2025-06-05 18:50:24,368 | INFO     | architecture information:
[2025-06-05 14:50:43] 2025-06-05 18:50:24,368 | INFO     | executing command: cat /etc/os-release
[2025-06-05 14:50:43] 2025-06-05 18:50:24,383 | INFO     | cat /etc/os-release:
[2025-06-05 14:50:43] NAME="CentOS Linux"
[2025-06-05 14:50:43] VERSION="7 (Core)"
[2025-06-05 14:50:43] ID="centos"
[2025-06-05 14:50:43] ID_LIKE="rhel fedora"
[2025-06-05 14:50:43] VERSION_ID="7"
[2025-06-05 14:50:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 14:50:43] ANSI_COLOR="0;31"
[2025-06-05 14:50:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 14:50:43] HOME_URL="https://www.centos.org/"
[2025-06-05 14:50:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 14:50:43] 
[2025-06-05 14:50:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 14:50:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 14:50:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 14:50:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 14:50:43] 
[2025-06-05 14:50:43] 2025-06-05 18:50:24,383 | INFO     | **************************************
[2025-06-05 14:50:43] 2025-06-05 18:50:24,886 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 14:50:43] 2025-06-05 18:50:24,905 | INFO     | sufficient remaining disk space (86476062720 B)
[2025-06-05 14:50:43] 2025-06-05 18:50:24,905 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 14:50:43] 2025-06-05 18:50:24,905 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 14:50:43] 2025-06-05 18:50:24,905 | INFO     | update_server=False
[2025-06-05 14:50:43] 2025-06-05 18:50:24,906 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 14:50:43] 2025-06-05 18:50:24,906 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:50:43] 2025-06-05 18:50:24,906 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 14:50:43] 2025-06-05 18:50:24,906 | INFO     | aborting loop
[2025-06-05 14:50:43] 2025-06-05 18:50:24,907 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 14:50:43] 2025-06-05 18:50:24,907 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 14:50:43] 2025-06-05 18:50:24,907 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 14:50:43] 2025-06-05 18:50:25,166 | INFO     | all data control threads have been joined
[2025-06-05 14:50:43] 2025-06-05 18:50:25,507 | INFO     | all job control threads have been joined
[2025-06-05 14:50:43] 2025-06-05 18:50:25,666 | INFO     | all payload control threads have been joined
[2025-06-05 14:50:43] 2025-06-05 18:50:25,911 | INFO     | [job] retrieve thread has finished
[2025-06-05 14:50:43] 2025-06-05 18:50:25,912 | INFO     | [job] job monitor thread has finished
[2025-06-05 14:50:43] 2025-06-05 18:50:26,171 | INFO     | [data] control thread has finished
[2025-06-05 14:50:43] 2025-06-05 18:50:26,406 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 14:50:43] 2025-06-05 18:50:26,513 | INFO     | [job] control thread has finished
[2025-06-05 14:50:43] 2025-06-05 18:50:26,543 | INFO     | [payload] failed_post thread has finished
[2025-06-05 14:50:43] 2025-06-05 18:50:26,672 | INFO     | [payload] control thread has finished
[2025-06-05 14:50:43] 2025-06-05 18:50:26,744 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 14:50:43] 2025-06-05 18:50:26,849 | INFO     | [data] copytool_in thread has finished
[2025-06-05 14:50:43] 2025-06-05 18:50:27,073 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 14:50:43] 2025-06-05 18:50:27,130 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 14:50:43] 2025-06-05 18:50:27,263 | INFO     | [job] validate thread has finished
[2025-06-05 14:50:43] 2025-06-05 18:50:27,343 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 14:50:43] 2025-06-05 18:50:27,501 | INFO     | [payload] validate_post thread has finished
[2025-06-05 14:50:43] 2025-06-05 18:50:27,655 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:50:43] 2025-06-05 18:50:28,411 | INFO     | [data] copytool_out thread has finished
[2025-06-05 14:50:43] 2025-06-05 18:50:28,661 | INFO     | [job] queue monitor thread has finished
[2025-06-05 14:50:43] 2025-06-05 18:50:31,079 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 14:50:43] 2025-06-05 18:50:35,026 | INFO     | job.realtimelogging is not enabled
[2025-06-05 14:50:43] 2025-06-05 18:50:36,031 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 14:50:43] 2025-06-05 18:50:37,762 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140504857491264)>', '<ExcThread(monitor, started 140504503129856)>']
[2025-06-05 14:50:43] 2025-06-05 18:50:37,967 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 14:50:43] 2025-06-05 18:50:37,967 | INFO     | [monitor] control thread has ended
[2025-06-05 14:50:43] 2025-06-05 18:50:42,783 | INFO     | all workflow threads have been joined
[2025-06-05 14:50:43] 2025-06-05 18:50:42,784 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 14:50:43] 2025-06-05 18:50:42,785 | INFO     | traces error code: 0
[2025-06-05 14:50:43] 2025-06-05 18:50:42,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 14:50:43] 2025-06-05 18:50:42,869 [wrapper] ==== pilot stdout END ====
[2025-06-05 14:50:43] 2025-06-05 18:50:42,872 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 14:50:43] 2025-06-05 18:50:42,874 [wrapper] pilotpid: 1246996
[2025-06-05 14:50:43] 2025-06-05 18:50:42,876 [wrapper] Pilot exit status: 0
[2025-06-05 14:50:43] 2025-06-05 18:50:42,885 [wrapper] pandaids: 6668689257
[2025-06-05 14:50:43] 2025-06-05 18:50:42,945 [wrapper] cleanup supervisor_pilot 1604009 1246997
[2025-06-05 14:50:43] 2025-06-05 18:50:42,949 [wrapper] Test setup, not cleaning
[2025-06-05 14:50:43] 2025-06-05 18:50:42,951 [wrapper] apfmon messages muted
[2025-06-05 14:50:43] 2025-06-05 18:50:42,953 [wrapper] ==== wrapper stdout END ====
[2025-06-05 14:50:43] 2025-06-05 18:50:42,955 [wrapper] ==== wrapper stderr END ====
[2025-06-05 14:50:43]  *** Error codes and diagnostics ***
[2025-06-05 14:50:43]     "exeErrorCode": 0,
[2025-06-05 14:50:43]     "exeErrorDiag": "",
[2025-06-05 14:50:43]     "pilotErrorCode": 0,
[2025-06-05 14:50:43]     "pilotErrorDiag": "",
[2025-06-05 14:50:43]  *** Listing of results directory ***
[2025-06-05 14:50:43] total 425956
[2025-06-05 14:50:43] -rwx------. 1 boincer umatlas     37140 May 28 12:47 runpilot2-wrapper.sh
[2025-06-05 14:50:43] -rw-r--r--. 1 boincer umatlas      5111 May 28 12:47 queuedata.json
[2025-06-05 14:50:43] -rw-r--r--. 1 boincer umatlas    495897 May 28 12:47 pilot3.tar.gz
[2025-06-05 14:50:43] -rw-r--r--. 1 boincer umatlas       100 Jun  5 13:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 14:50:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 13:19 run_atlas
[2025-06-05 14:50:43] -rw-r--r--. 1 boincer umatlas       105 Jun  5 13:19 job.xml
[2025-06-05 14:50:43] -rw-r--r--. 2 boincer umatlas 224798471 Jun  5 13:19 EVNT.44871834._003404.pool.root.1
[2025-06-05 14:50:43] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 13:19 start_atlas.sh
[2025-06-05 14:50:43] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 13:19 shared
[2025-06-05 14:50:43] -rw-r--r--. 2 boincer umatlas    508870 Jun  5 13:19 input.tar.gz
[2025-06-05 14:50:43] -rw-r--r--. 1 boincer umatlas         0 Jun  5 13:19 boinc_lockfile
[2025-06-05 14:50:43] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 13:19 pandaJob.out
[2025-06-05 14:50:43] -rw-------. 1 boincer umatlas    983229 Jun  5 13:19 agis_schedconf.cvmfs.json
[2025-06-05 14:50:43] -rw-------. 1 boincer umatlas   1598969 Jun  5 13:19 agis_ddmendpoints.agis.ALL.json
[2025-06-05 14:50:43] drwx------. 4 boincer umatlas      4096 Jun  5 13:19 pilot3
[2025-06-05 14:50:43] -rw-r--r--. 1 boincer umatlas      6896 Jun  5 14:48 init_data.xml
[2025-06-05 14:50:43] -rw-r--r--. 1 boincer umatlas       529 Jun  5 14:49 boinc_task_state.xml
[2025-06-05 14:50:43] -rw-------. 1 boincer umatlas 205837300 Jun  5 14:49 HITS.44871837._087395.pool.root.1
[2025-06-05 14:50:43] -rw-------. 1 boincer umatlas      1031 Jun  5 14:50 memory_monitor_summary.json
[2025-06-05 14:50:43] -rw-------. 1 boincer umatlas        95 Jun  5 14:50 pilot_heartbeat.json
[2025-06-05 14:50:43] -rw-------. 1 boincer umatlas    325106 Jun  5 14:50 log.44871837._087395.job.log.tgz.1
[2025-06-05 14:50:43] -rw-------. 1 boincer umatlas      7684 Jun  5 14:50 heartbeat.json
[2025-06-05 14:50:43] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 14:50 boinc_mmap_file
[2025-06-05 14:50:43] -rw-r--r--. 1 boincer umatlas        27 Jun  5 14:50 wrapper_checkpoint.txt
[2025-06-05 14:50:43] -rw-------. 1 boincer umatlas      4548 Jun  5 14:50 pilotlog.txt
[2025-06-05 14:50:43] -rw-------. 1 boincer umatlas    531349 Jun  5 14:50 log.44871837._087395.job.log.1
[2025-06-05 14:50:43] -rw-------. 1 boincer umatlas       357 Jun  5 14:50 output.list
[2025-06-05 14:50:43] -rw-r--r--. 1 boincer umatlas       620 Jun  5 14:50 runtime_log
[2025-06-05 14:50:43] -rw-------. 1 boincer umatlas    870400 Jun  5 14:50 result.tar.gz
[2025-06-05 14:50:43] -rw-r--r--. 1 boincer umatlas      8659 Jun  5 14:50 runtime_log.err
[2025-06-05 14:50:43] -rw-------. 1 boincer umatlas       653 Jun  5 14:50 nOFKDmW7Ye7n9Rq4apOajLDm4fhM0noT9bVof3QYDmXnTKDmTm9cIm.diag
[2025-06-05 14:50:43] -rw-r--r--. 1 boincer umatlas     21429 Jun  5 14:50 stderr.txt
[2025-06-05 14:50:43] HITS file was successfully produced:
[2025-06-05 14:50:43] -rw-------. 1 boincer umatlas 205837300 Jun  5 14:49 shared/HITS.pool.root.1
[2025-06-05 14:50:43]  *** Contents of shared directory: ***
[2025-06-05 14:50:43] total 421924
[2025-06-05 14:50:43] -rw-r--r--. 2 boincer umatlas 224798471 Jun  5 13:19 ATLAS.root_0
[2025-06-05 14:50:43] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 13:19 start_atlas.sh
[2025-06-05 14:50:43] -rw-r--r--. 2 boincer umatlas    508870 Jun  5 13:19 input.tar.gz
[2025-06-05 14:50:43] -rw-------. 1 boincer umatlas 205837300 Jun  5 14:49 HITS.pool.root.1
[2025-06-05 14:50:43] -rw-------. 1 boincer umatlas    870400 Jun  5 14:50 result.tar.gz
14:50:44 (1243355): run_atlas exited; CPU time 38566.335480
14:50:44 (1243355): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN