Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:19:29 (1249038): wrapper (7.7.26015): starting
13:19:29 (1249038): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 13:19:29] Arguments: --nthreads 8
[2025-06-05 13:19:29] Threads: 8
[2025-06-05 13:19:29] Checking for CVMFS
[2025-06-05 13:19:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 13:19:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 13:19:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 13:19:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 13:19:29] 2.12.6.0 2939844 24978 502104 146827 3 28 21536759 40960001 12055 16776704 1 130677050 99.694 109442253 27955 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 13:19:29] CVMFS is ok
[2025-06-05 13:19:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 13:19:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 13:19:29] Further information can be found at the LHC@home message board.
[2025-06-05 13:19:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 13:19:29] Checking for apptainer binary...
[2025-06-05 13:19:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 13:19:29] Running /usr/bin/apptainer --version
[2025-06-05 13:19:29] apptainer version 1.4.1-1.el9
[2025-06-05 13:19:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:19:30] c7-11-15.aglt2.org
[2025-06-05 13:19:30] apptainer works
[2025-06-05 13:19:30] Set ATHENA_PROC_NUMBER=8
[2025-06-05 13:19:30] Set ATHENA_CORE_NUMBER=8
[2025-06-05 13:19:30] Starting ATLAS job with PandaID=6668442622
[2025-06-05 13:19:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 14:43:39]  *** The last 200 lines of the pilot log: ***
[2025-06-05 14:43:39] ]
[2025-06-05 14:43:39] 2025-06-05 18:43:10,604 | INFO     | transferring file log.44871837._084544.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6668442622/log.44871837._084544.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 14:43:39] 2025-06-05 18:43:10,604 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6668442622/log.44871837._084544.job.log.tgz.1 /tmp/boinchome/slots/1/log.44871837._084544.job
[2025-06-05 14:43:39] 2025-06-05 18:43:10,619 | INFO     | adding to output.list: log.44871837._084544.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8d/35/log.44871837._084544.job.log.tg
[2025-06-05 14:43:39] 2025-06-05 18:43:10,620 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 14:43:39] 2025-06-05 18:43:10,620 | INFO     | summary of transferred files:
[2025-06-05 14:43:39] 2025-06-05 18:43:10,620 | INFO     |  -- lfn=log.44871837._084544.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 14:43:39] 2025-06-05 18:43:10,620 | INFO     | stage-out finished correctly
[2025-06-05 14:43:39] 2025-06-05 18:43:10,845 | WARNING  | process 1271478 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 14:43:39] 2025-06-05 18:43:10,846 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668442622/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 14:43:39] 2025-06-05 18:43:10,846 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668442622/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 14:43:39] 2025-06-05 18:43:10,847 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2899884 B
[2025-06-05 14:43:39] 2025-06-05 18:43:10,847 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15783 B
[2025-06-05 14:43:39] 2025-06-05 18:43:10,847 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 14:43:39] 2025-06-05 18:43:10,863 | INFO     | sufficient remaining disk space (85843771392 B)
[2025-06-05 14:43:39] 2025-06-05 18:43:10,863 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-05 14:43:39] 2025-06-05 18:43:10,864 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6668442622: 3200786 B (within 2537553920 B limit)
[2025-06-05 14:43:39] 2025-06-05 18:43:10,864 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6668442622/HITS.44871837._084544.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-05 14:43:39] 2025-06-05 18:43:10,864 | INFO     | total size of present files: 0 B (workdir size: 3200786 B)
[2025-06-05 14:43:39] 2025-06-05 18:43:10,865 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6668442622/HITS.44871837._084544.pool.root.1 since it does not exist
[2025-06-05 14:43:39] 2025-06-05 18:43:11,127 | INFO     | number of running child processes to parent process 1271478: 1
[2025-06-05 14:43:39] 2025-06-05 18:43:11,128 | INFO     | maximum number of monitored processes: 6
[2025-06-05 14:43:39] 2025-06-05 18:43:13,631 | INFO     | monitor loop #370: job 0:6668442622 is in state 'finished'
[2025-06-05 14:43:39] 2025-06-05 18:43:13,631 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:43:39] 2025-06-05 18:43:13,644 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 14:43:39] 2025-06-05 18:43:14,961 | INFO     | PID=1255050 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 14:43:39] 2025-06-05 18:43:14,962 | INFO     | .. there are 16 such processes running
[2025-06-05 14:43:39] 2025-06-05 18:43:16,134 | INFO     | monitor loop #371: job 0:6668442622 is in state 'finished'
[2025-06-05 14:43:39] 2025-06-05 18:43:16,134 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:43:39] 2025-06-05 18:43:16,663 | INFO     | job 6668442622 has state=finished
[2025-06-05 14:43:39] 2025-06-05 18:43:16,663 | INFO     | preparing for final server update for job 6668442622 in state='finished'
[2025-06-05 14:43:39] 2025-06-05 18:43:16,664 | INFO     | this job has now completed (state=finished)
[2025-06-05 14:43:39] 2025-06-05 18:43:16,664 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 14:43:39] 2025-06-05 18:43:16,664 | INFO     | log transfer has been attempted: DONE
[2025-06-05 14:43:39] 2025-06-05 18:43:16,664 | INFO     | job 6668442622 has finished - writing final server update
[2025-06-05 14:43:39] 2025-06-05 18:43:16,664 | INFO     | total number of processed events: 400 (read)
[2025-06-05 14:43:39] 2025-06-05 18:43:16,681 | INFO     | executing command: lscpu
[2025-06-05 14:43:39] 2025-06-05 18:43:16,740 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 14:43:39] 2025-06-05 18:43:18,637 | INFO     | monitor loop #372: job 0:6668442622 is in state 'finished'
[2025-06-05 14:43:39] 2025-06-05 18:43:18,637 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:43:39] 2025-06-05 18:43:20,023 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 14:43:39] 2025-06-05 18:43:20,024 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668442622/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 14:43:39] 2025-06-05 18:43:20,026 | INFO     | extracted standard info from prmon json
[2025-06-05 14:43:39] 2025-06-05 18:43:20,026 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 14:43:39] 2025-06-05 18:43:20,026 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 14:43:39] 2025-06-05 18:43:20,027 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 14:43:39] 2025-06-05 18:43:20,027 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 14:43:39] 2025-06-05 18:43:20,028 | INFO     | fitting pss+swap vs Time
[2025-06-05 14:43:39] 2025-06-05 18:43:20,028 | INFO     | sum of square deviations: 130793150.0
[2025-06-05 14:43:39] 2025-06-05 18:43:20,029 | INFO     | sum of deviations: -7322800814.999999
[2025-06-05 14:43:39] 2025-06-05 18:43:20,029 | INFO     | mean x: 1749146568.0
[2025-06-05 14:43:39] 2025-06-05 18:43:20,029 | INFO     | mean y: 2313149.28
[2025-06-05 14:43:39] 2025-06-05 18:43:20,029 | INFO     | -- intersect: 97932915124.26761
[2025-06-05 14:43:39] 2025-06-05 18:43:20,029 | INFO     | intersect: 97932915124.26761
[2025-06-05 14:43:39] 2025-06-05 18:43:20,029 | INFO     | chi2: 0.06131806993963556
[2025-06-05 14:43:39] 2025-06-05 18:43:20,029 | INFO     | -- intersect: 97932915124.26761
[2025-06-05 14:43:39] 2025-06-05 18:43:20,029 | INFO     | current memory leak: -55.99 B/s (using 75 data points, chi2=0.06)
[2025-06-05 14:43:39] 2025-06-05 18:43:20,030 | INFO     | ..............................
[2025-06-05 14:43:39] 2025-06-05 18:43:20,030 | INFO     | . Timing measurements:
[2025-06-05 14:43:39] 2025-06-05 18:43:20,030 | INFO     | . get job = 0 s
[2025-06-05 14:43:39] 2025-06-05 18:43:20,030 | INFO     | . initial setup = 2 s
[2025-06-05 14:43:39] 2025-06-05 18:43:20,030 | INFO     | . payload setup = 6 s
[2025-06-05 14:43:39] 2025-06-05 18:43:20,030 | INFO     | . stage-in = 0 s
[2025-06-05 14:43:39] 2025-06-05 18:43:20,030 | INFO     | . payload execution = 4985 s
[2025-06-05 14:43:39] 2025-06-05 18:43:20,030 | INFO     | . stage-out = 0 s
[2025-06-05 14:43:39] 2025-06-05 18:43:20,030 | INFO     | . log creation = 0 s
[2025-06-05 14:43:39] 2025-06-05 18:43:20,030 | INFO     | ..............................
[2025-06-05 14:43:39] 2025-06-05 18:43:20,109 | INFO     | 
[2025-06-05 14:43:39] 2025-06-05 18:43:20,109 | INFO     | job summary report
[2025-06-05 14:43:39] 2025-06-05 18:43:20,109 | INFO     | --------------------------------------------------
[2025-06-05 14:43:39] 2025-06-05 18:43:20,109 | INFO     | PanDA job id: 6668442622
[2025-06-05 14:43:39] 2025-06-05 18:43:20,109 | INFO     | task id: 44871837
[2025-06-05 14:43:39] 2025-06-05 18:43:20,109 | INFO     | errors: (none)
[2025-06-05 14:43:39] 2025-06-05 18:43:20,109 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 14:43:39] 2025-06-05 18:43:20,110 | INFO     | pilot state: finished 
[2025-06-05 14:43:39] 2025-06-05 18:43:20,110 | INFO     | transexitcode: 0
[2025-06-05 14:43:39] 2025-06-05 18:43:20,110 | INFO     | exeerrorcode: 0
[2025-06-05 14:43:39] 2025-06-05 18:43:20,110 | INFO     | exeerrordiag: 
[2025-06-05 14:43:39] 2025-06-05 18:43:20,110 | INFO     | exitcode: 0
[2025-06-05 14:43:39] 2025-06-05 18:43:20,110 | INFO     | exitmsg: OK
[2025-06-05 14:43:39] 2025-06-05 18:43:20,110 | INFO     | cpuconsumptiontime: 36922 s
[2025-06-05 14:43:39] 2025-06-05 18:43:20,110 | INFO     | nevents: 400
[2025-06-05 14:43:39] 2025-06-05 18:43:20,110 | INFO     | neventsw: 0
[2025-06-05 14:43:39] 2025-06-05 18:43:20,110 | INFO     | pid: 1271478
[2025-06-05 14:43:39] 2025-06-05 18:43:20,110 | INFO     | pgrp: 1271478
[2025-06-05 14:43:39] 2025-06-05 18:43:20,110 | INFO     | corecount: 8
[2025-06-05 14:43:39] 2025-06-05 18:43:20,110 | INFO     | event service: False
[2025-06-05 14:43:39] 2025-06-05 18:43:20,111 | INFO     | sizes: {0: 2397339, 5: 2397545, 11: 2397601, 4995: 2423866, 4996: 2432807, 4999: 2432891, 5005: 2433189}
[2025-06-05 14:43:39] 2025-06-05 18:43:20,111 | INFO     | --------------------------------------------------
[2025-06-05 14:43:39] 2025-06-05 18:43:20,111 | INFO     | 
[2025-06-05 14:43:39] 2025-06-05 18:43:20,111 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 14:43:39] 2025-06-05 18:43:20,128 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 14:43:39] 2025-06-05 18:43:20,128 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 14:43:39] 2025-06-05 18:43:20,128 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 14:43:39] 2025-06-05 18:43:20,129 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 14:43:39] 2025-06-05 18:43:20,129 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 14:43:39] 2025-06-05 18:43:20,129 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 14:43:39] 2025-06-05 18:43:20,129 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 14:43:39] 2025-06-05 18:43:20,129 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 14:43:39] 2025-06-05 18:43:20,129 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 14:43:39] 2025-06-05 18:43:20,129 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 14:43:39] 2025-06-05 18:43:20,129 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 14:43:39] 2025-06-05 18:43:20,129 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 14:43:39] 2025-06-05 18:43:20,129 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 14:43:39] 2025-06-05 18:43:20,129 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 14:43:39] 2025-06-05 18:43:20,129 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 14:43:39] 2025-06-05 18:43:20,129 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 14:43:39] 2025-06-05 18:43:20,130 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 14:43:39] 2025-06-05 18:43:20,130 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 14:43:39] 2025-06-05 18:43:20,130 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 14:43:39] 2025-06-05 18:43:20,130 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 14:43:39] 2025-06-05 18:43:20,130 | INFO     | job 6668442622 has completed (purged errors)
[2025-06-05 14:43:39] 2025-06-05 18:43:20,130 | INFO     | overall cleanup function is called
[2025-06-05 14:43:39] 2025-06-05 18:43:21,138 | INFO     | --- collectZombieJob: --- 10, [1271478]
[2025-06-05 14:43:39] 2025-06-05 18:43:21,139 | INFO     | zombie collector waiting for pid 1271478
[2025-06-05 14:43:39] 2025-06-05 18:43:21,139 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 14:43:39] 2025-06-05 18:43:21,139 | INFO     | collected zombie processes
[2025-06-05 14:43:39] 2025-06-05 18:43:21,139 | INFO     | will attempt to kill all subprocesses of pid=1271478
[2025-06-05 14:43:39] 2025-06-05 18:43:21,402 | INFO     | process IDs to be killed: [1271478] (in reverse order)
[2025-06-05 14:43:39] 2025-06-05 18:43:21,489 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 14:43:39] 2025-06-05 18:43:21,489 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 14:43:39] 2025-06-05 18:43:21,501 | INFO     | did not find any defunct processes belonging to 1271478
[2025-06-05 14:43:39] 2025-06-05 18:43:21,511 | INFO     | did not find any defunct processes belonging to 1271478
[2025-06-05 14:43:39] 2025-06-05 18:43:21,511 | INFO     | ready for new job
[2025-06-05 14:43:39] 2025-06-05 18:43:21,511 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 14:43:39] 2025-06-05 18:43:21,512 | INFO     | **************************************
[2025-06-05 14:43:39] 2025-06-05 18:43:21,512 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 14:43:39] 2025-06-05 18:43:21,512 | INFO     | **************************************
[2025-06-05 14:43:39] 2025-06-05 18:43:21,513 | INFO     | 
[2025-06-05 14:43:39] 2025-06-05 18:43:21,528 | INFO     | architecture information:
[2025-06-05 14:43:39] 2025-06-05 18:43:21,528 | INFO     | executing command: cat /etc/os-release
[2025-06-05 14:43:39] 2025-06-05 18:43:21,540 | INFO     | cat /etc/os-release:
[2025-06-05 14:43:39] NAME="CentOS Linux"
[2025-06-05 14:43:39] VERSION="7 (Core)"
[2025-06-05 14:43:39] ID="centos"
[2025-06-05 14:43:39] ID_LIKE="rhel fedora"
[2025-06-05 14:43:39] VERSION_ID="7"
[2025-06-05 14:43:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 14:43:39] ANSI_COLOR="0;31"
[2025-06-05 14:43:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 14:43:39] HOME_URL="https://www.centos.org/"
[2025-06-05 14:43:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 14:43:39] 
[2025-06-05 14:43:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 14:43:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 14:43:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 14:43:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 14:43:39] 
[2025-06-05 14:43:39] 2025-06-05 18:43:21,541 | INFO     | **************************************
[2025-06-05 14:43:39] 2025-06-05 18:43:22,043 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 14:43:39] 2025-06-05 18:43:22,057 | INFO     | sufficient remaining disk space (85845868544 B)
[2025-06-05 14:43:39] 2025-06-05 18:43:22,058 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 14:43:39] 2025-06-05 18:43:22,058 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 14:43:39] 2025-06-05 18:43:22,058 | INFO     | update_server=False
[2025-06-05 14:43:39] 2025-06-05 18:43:22,058 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 14:43:39] 2025-06-05 18:43:22,058 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:43:39] 2025-06-05 18:43:22,058 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 14:43:39] 2025-06-05 18:43:22,144 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:43:39] 2025-06-05 18:43:22,145 | INFO     | aborting loop
[2025-06-05 14:43:39] 2025-06-05 18:43:22,158 | INFO     | all data control threads have been joined
[2025-06-05 14:43:39] 2025-06-05 18:43:22,979 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 14:43:39] 2025-06-05 18:43:22,980 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 14:43:39] 2025-06-05 18:43:22,980 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 14:43:39] 2025-06-05 18:43:23,058 | INFO     | [job] retrieve thread has finished
[2025-06-05 14:43:39] 2025-06-05 18:43:23,063 | INFO     | [job] queue monitor thread has finished
[2025-06-05 14:43:39] 2025-06-05 18:43:23,150 | INFO     | [job] job monitor thread has finished
[2025-06-05 14:43:39] 2025-06-05 18:43:23,153 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 14:43:39] 2025-06-05 18:43:23,154 | INFO     | all job control threads have been joined
[2025-06-05 14:43:39] 2025-06-05 18:43:23,163 | INFO     | [data] control thread has finished
[2025-06-05 14:43:39] 2025-06-05 18:43:23,297 | INFO     | [job] validate thread has finished
[2025-06-05 14:43:39] 2025-06-05 18:43:23,524 | INFO     | [data] copytool_in thread has finished
[2025-06-05 14:43:39] 2025-06-05 18:43:23,544 | INFO     | all payload control threads have been joined
[2025-06-05 14:43:39] 2025-06-05 18:43:23,909 | INFO     | [payload] validate_post thread has finished
[2025-06-05 14:43:39] 2025-06-05 18:43:23,951 | INFO     | [payload] failed_post thread has finished
[2025-06-05 14:43:39] 2025-06-05 18:43:24,064 | INFO     | [data] copytool_out thread has finished
[2025-06-05 14:43:39] 2025-06-05 18:43:24,160 | INFO     | [job] control thread has finished
[2025-06-05 14:43:39] 2025-06-05 18:43:24,223 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 14:43:39] 2025-06-05 18:43:24,348 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 14:43:39] 2025-06-05 18:43:24,495 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 14:43:39] 2025-06-05 18:43:24,546 | INFO     | [payload] control thread has finished
[2025-06-05 14:43:39] 2025-06-05 18:43:28,229 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 14:43:39] 2025-06-05 18:43:32,456 | INFO     | job.realtimelogging is not enabled
[2025-06-05 14:43:39] 2025-06-05 18:43:33,459 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 14:43:39] 2025-06-05 18:43:33,831 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139711999457088)>', '<ExcThread(monitor, started 139711511254784)>']
[2025-06-05 14:43:39] 2025-06-05 18:43:34,030 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 14:43:39] 2025-06-05 18:43:34,031 | INFO     | [monitor] control thread has ended
[2025-06-05 14:43:39] 2025-06-05 18:43:38,857 | INFO     | all workflow threads have been joined
[2025-06-05 14:43:39] 2025-06-05 18:43:38,857 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 14:43:39] 2025-06-05 18:43:38,857 | INFO     | traces error code: 0
[2025-06-05 14:43:39] 2025-06-05 18:43:38,857 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 14:43:39] 2025-06-05 18:43:38,976 [wrapper] ==== pilot stdout END ====
[2025-06-05 14:43:39] 2025-06-05 18:43:38,978 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 14:43:39] 2025-06-05 18:43:38,980 [wrapper] pilotpid: 1255050
[2025-06-05 14:43:39] 2025-06-05 18:43:38,982 [wrapper] Pilot exit status: 0
[2025-06-05 14:43:39] 2025-06-05 18:43:38,992 [wrapper] pandaids: 6668442622
[2025-06-05 14:43:39] 2025-06-05 18:43:39,052 [wrapper] cleanup supervisor_pilot 1558880 1255051
[2025-06-05 14:43:39] 2025-06-05 18:43:39,055 [wrapper] Test setup, not cleaning
[2025-06-05 14:43:39] 2025-06-05 18:43:39,057 [wrapper] apfmon messages muted
[2025-06-05 14:43:39] 2025-06-05 18:43:39,060 [wrapper] ==== wrapper stdout END ====
[2025-06-05 14:43:39] 2025-06-05 18:43:39,063 [wrapper] ==== wrapper stderr END ====
[2025-06-05 14:43:39]  *** Error codes and diagnostics ***
[2025-06-05 14:43:39]     "exeErrorCode": 0,
[2025-06-05 14:43:39]     "exeErrorDiag": "",
[2025-06-05 14:43:39]     "pilotErrorCode": 0,
[2025-06-05 14:43:39]     "pilotErrorDiag": "",
[2025-06-05 14:43:39]  *** Listing of results directory ***
[2025-06-05 14:43:39] total 407180
[2025-06-05 14:43:39] -rw-r--r--. 1 boincer umatlas      5111 May 28 08:59 queuedata.json
[2025-06-05 14:43:39] -rwx------. 1 boincer umatlas     37140 May 28 09:01 runpilot2-wrapper.sh
[2025-06-05 14:43:39] -rw-r--r--. 1 boincer umatlas    495897 May 28 09:01 pilot3.tar.gz
[2025-06-05 14:43:39] -rw-r--r--. 1 boincer umatlas       100 Jun  5 13:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 14:43:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 13:19 run_atlas
[2025-06-05 14:43:39] -rw-r--r--. 1 boincer umatlas       105 Jun  5 13:19 job.xml
[2025-06-05 14:43:39] -rw-r--r--. 2 boincer umatlas 224663582 Jun  5 13:19 EVNT.44871834._003299.pool.root.1
[2025-06-05 14:43:39] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 13:19 start_atlas.sh
[2025-06-05 14:43:39] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 13:19 shared
[2025-06-05 14:43:39] -rw-r--r--. 2 boincer umatlas    508873 Jun  5 13:19 input.tar.gz
[2025-06-05 14:43:39] -rw-r--r--. 1 boincer umatlas         0 Jun  5 13:19 boinc_lockfile
[2025-06-05 14:43:39] -rw-r--r--. 1 boincer umatlas      2557 Jun  5 13:19 pandaJob.out
[2025-06-05 14:43:39] -rw-------. 1 boincer umatlas    983229 Jun  5 13:19 agis_schedconf.cvmfs.json
[2025-06-05 14:43:39] -rw-------. 1 boincer umatlas   1598969 Jun  5 13:19 agis_ddmendpoints.agis.ALL.json
[2025-06-05 14:43:39] drwx------. 4 boincer umatlas      4096 Jun  5 13:19 pilot3
[2025-06-05 14:43:39] -rw-r--r--. 1 boincer umatlas      6896 Jun  5 14:36 init_data.xml
[2025-06-05 14:43:39] -rw-------. 1 boincer umatlas        95 Jun  5 14:42 pilot_heartbeat.json
[2025-06-05 14:43:39] -rw-------. 1 boincer umatlas 186876827 Jun  5 14:42 HITS.44871837._084544.pool.root.1
[2025-06-05 14:43:39] -rw-r--r--. 1 boincer umatlas       530 Jun  5 14:42 boinc_task_state.xml
[2025-06-05 14:43:39] -rw-------. 1 boincer umatlas      1030 Jun  5 14:43 memory_monitor_summary.json
[2025-06-05 14:43:39] -rw-------. 1 boincer umatlas    296476 Jun  5 14:43 log.44871837._084544.job.log.tgz.1
[2025-06-05 14:43:39] -rw-------. 1 boincer umatlas      7686 Jun  5 14:43 heartbeat.json
[2025-06-05 14:43:39] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 14:43 boinc_mmap_file
[2025-06-05 14:43:39] -rw-r--r--. 1 boincer umatlas        27 Jun  5 14:43 wrapper_checkpoint.txt
[2025-06-05 14:43:39] -rw-------. 1 boincer umatlas      4425 Jun  5 14:43 pilotlog.txt
[2025-06-05 14:43:39] -rw-------. 1 boincer umatlas    491570 Jun  5 14:43 log.44871837._084544.job.log.1
[2025-06-05 14:43:39] -rw-------. 1 boincer umatlas       357 Jun  5 14:43 output.list
[2025-06-05 14:43:39] -rw-r--r--. 1 boincer umatlas       620 Jun  5 14:43 runtime_log
[2025-06-05 14:43:39] -rw-------. 1 boincer umatlas    808960 Jun  5 14:43 result.tar.gz
[2025-06-05 14:43:39] -rw-------. 1 boincer umatlas       652 Jun  5 14:43 yqjLDm0aVe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBBcKDmnU9QNm.diag
[2025-06-05 14:43:39] -rw-r--r--. 1 boincer umatlas      8659 Jun  5 14:43 runtime_log.err
[2025-06-05 14:43:39] -rw-r--r--. 1 boincer umatlas     22641 Jun  5 14:43 stderr.txt
[2025-06-05 14:43:39] HITS file was successfully produced:
[2025-06-05 14:43:39] -rw-------. 1 boincer umatlas 186876827 Jun  5 14:42 shared/HITS.pool.root.1
[2025-06-05 14:43:39]  *** Contents of shared directory: ***
[2025-06-05 14:43:39] total 403212
[2025-06-05 14:43:39] -rw-r--r--. 2 boincer umatlas 224663582 Jun  5 13:19 ATLAS.root_0
[2025-06-05 14:43:39] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 13:19 start_atlas.sh
[2025-06-05 14:43:39] -rw-r--r--. 2 boincer umatlas    508873 Jun  5 13:19 input.tar.gz
[2025-06-05 14:43:39] -rw-------. 1 boincer umatlas 186876827 Jun  5 14:42 HITS.pool.root.1
[2025-06-05 14:43:39] -rw-------. 1 boincer umatlas    808960 Jun  5 14:43 result.tar.gz
14:43:40 (1249038): run_atlas exited; CPU time 36979.165966
14:43:40 (1249038): called boinc_finish(0)

</stderr_txt>
]]>

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