Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:19:43 (3442165): wrapper (7.7.26015): starting
13:19:43 (3442165): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 13:19:43] Arguments: --nthreads 8
[2025-06-05 13:19:43] Threads: 8
[2025-06-05 13:19:43] Checking for CVMFS
[2025-06-05 13:19:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 13:19:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 13:19:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 13:19:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 13:19:44] 2.12.6.0 65732 1460 143224 146827 1 88 22997229 40960000 35892 16776704 0 13786368 99.740 8172308 36742 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 13:19:44] CVMFS is ok
[2025-06-05 13:19:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 13:19:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 13:19:44] Further information can be found at the LHC@home message board.
[2025-06-05 13:19:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 13:19:44] Checking for apptainer binary...
[2025-06-05 13:19:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 13:19:44] Running /usr/bin/apptainer --version
[2025-06-05 13:19:44] apptainer version 1.4.1-1.el9
[2025-06-05 13:19:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:19:44] c8-16-2.aglt2.org
[2025-06-05 13:19:44] apptainer works
[2025-06-05 13:19:44] Set ATHENA_PROC_NUMBER=8
[2025-06-05 13:19:44] Set ATHENA_CORE_NUMBER=8
[2025-06-05 13:19:44] Starting ATLAS job with PandaID=6668440952
[2025-06-05 13:19:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 14:46:33]  *** The last 200 lines of the pilot log: ***
[2025-06-05 14:46:33]  filetype=log
[2025-06-05 14:46:33]  guid=7d9e424f-7546-4987-9fd8-36e480817455
[2025-06-05 14:46:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 14:46:33]  is_altstaged=None
[2025-06-05 14:46:33]  is_tar=False
[2025-06-05 14:46:33]  lfn=log.44871837._084281.job.log.tgz.1
[2025-06-05 14:46:33]  mtime=0
[2025-06-05 14:46:33]  protocol_id=None
[2025-06-05 14:46:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 14:46:33]  replicas=None
[2025-06-05 14:46:33]  scope=mc23_13p6TeV
[2025-06-05 14:46:33]  status=None
[2025-06-05 14:46:33]  status_code=0
[2025-06-05 14:46:33]  storage_token=
[2025-06-05 14:46:33]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6668440952/log.44871837._084281.job.log.tgz.1
[2025-06-05 14:46:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/9d/log.44871837._084281.job.log.tgz.1
[2025-06-05 14:46:33]  workdir=None
[2025-06-05 14:46:33] ]
[2025-06-05 14:46:33] 2025-06-05 18:46:10,946 | INFO     | transferring file log.44871837._084281.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6668440952/log.44871837._084281.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 14:46:33] 2025-06-05 18:46:10,947 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6668440952/log.44871837._084281.job.log.tgz.1 /tmp/boinchome/slots/3/log.44871837._084281.job
[2025-06-05 14:46:33] 2025-06-05 18:46:10,964 | INFO     | adding to output.list: log.44871837._084281.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/9d/log.44871837._084281.job.log.tg
[2025-06-05 14:46:33] 2025-06-05 18:46:10,965 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 14:46:33] 2025-06-05 18:46:10,965 | INFO     | summary of transferred files:
[2025-06-05 14:46:33] 2025-06-05 18:46:10,965 | INFO     |  -- lfn=log.44871837._084281.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 14:46:33] 2025-06-05 18:46:10,965 | INFO     | stage-out finished correctly
[2025-06-05 14:46:33] 2025-06-05 18:46:11,801 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 14:46:33] 2025-06-05 18:46:13,652 | WARNING  | process 3482669 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 14:46:33] 2025-06-05 18:46:13,652 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6668440952/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 14:46:33] 2025-06-05 18:46:13,994 | INFO     | number of running child processes to parent process 3482669: 1
[2025-06-05 14:46:33] 2025-06-05 18:46:13,994 | INFO     | maximum number of monitored processes: 6
[2025-06-05 14:46:33] 2025-06-05 18:46:14,488 | INFO     | job 6668440952 has state=finished
[2025-06-05 14:46:33] 2025-06-05 18:46:14,488 | INFO     | preparing for final server update for job 6668440952 in state='finished'
[2025-06-05 14:46:33] 2025-06-05 18:46:14,489 | INFO     | this job has now completed (state=finished)
[2025-06-05 14:46:33] 2025-06-05 18:46:14,489 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 14:46:33] 2025-06-05 18:46:14,489 | INFO     | log transfer has been attempted: DONE
[2025-06-05 14:46:33] 2025-06-05 18:46:14,489 | INFO     | job 6668440952 has finished - writing final server update
[2025-06-05 14:46:33] 2025-06-05 18:46:14,489 | INFO     | total number of processed events: 400 (read)
[2025-06-05 14:46:33] 2025-06-05 18:46:14,494 | INFO     | executing command: lscpu
[2025-06-05 14:46:33] 2025-06-05 18:46:14,553 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 14:46:33] 2025-06-05 18:46:16,497 | INFO     | monitor loop #353: job 0:6668440952 is in state 'finished'
[2025-06-05 14:46:33] 2025-06-05 18:46:16,497 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 14:46:33] 2025-06-05 18:46:18,228 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 14:46:33] 2025-06-05 18:46:18,228 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6668440952/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 14:46:33] 2025-06-05 18:46:18,228 | INFO     | extracted standard info from prmon json
[2025-06-05 14:46:33] 2025-06-05 18:46:18,229 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 14:46:33] 2025-06-05 18:46:18,229 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 14:46:33] 2025-06-05 18:46:18,229 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 14:46:33] 2025-06-05 18:46:18,229 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 14:46:33] 2025-06-05 18:46:18,230 | INFO     | fitting pss+swap vs Time
[2025-06-05 14:46:33] 2025-06-05 18:46:18,230 | INFO     | sum of square deviations: 147126479.5
[2025-06-05 14:46:33] 2025-06-05 18:46:18,230 | INFO     | sum of deviations: -3017797855.9999995
[2025-06-05 14:46:33] 2025-06-05 18:46:18,231 | INFO     | mean x: 1749146678.5
[2025-06-05 14:46:33] 2025-06-05 18:46:18,231 | INFO     | mean y: 2531334.6666666665
[2025-06-05 14:46:33] 2025-06-05 18:46:18,231 | INFO     | -- intersect: 35880308837.02864
[2025-06-05 14:46:33] 2025-06-05 18:46:18,231 | INFO     | intersect: 35880308837.02864
[2025-06-05 14:46:33] 2025-06-05 18:46:18,231 | INFO     | chi2: 0.012773582479278458
[2025-06-05 14:46:33] 2025-06-05 18:46:18,231 | INFO     | -- intersect: 35880308837.02864
[2025-06-05 14:46:33] 2025-06-05 18:46:18,231 | INFO     | current memory leak: -20.51 B/s (using 78 data points, chi2=0.01)
[2025-06-05 14:46:33] 2025-06-05 18:46:18,231 | INFO     | ..............................
[2025-06-05 14:46:33] 2025-06-05 18:46:18,231 | INFO     | . Timing measurements:
[2025-06-05 14:46:33] 2025-06-05 18:46:18,231 | INFO     | . get job = 0 s
[2025-06-05 14:46:33] 2025-06-05 18:46:18,231 | INFO     | . initial setup = 2 s
[2025-06-05 14:46:33] 2025-06-05 18:46:18,231 | INFO     | . payload setup = 6 s
[2025-06-05 14:46:33] 2025-06-05 18:46:18,231 | INFO     | . stage-in = 0 s
[2025-06-05 14:46:33] 2025-06-05 18:46:18,231 | INFO     | . payload execution = 5147 s
[2025-06-05 14:46:33] 2025-06-05 18:46:18,231 | INFO     | . stage-out = 0 s
[2025-06-05 14:46:33] 2025-06-05 18:46:18,231 | INFO     | . log creation = 0 s
[2025-06-05 14:46:33] 2025-06-05 18:46:18,231 | INFO     | ..............................
[2025-06-05 14:46:33] 2025-06-05 18:46:18,281 | INFO     | 
[2025-06-05 14:46:33] 2025-06-05 18:46:18,281 | INFO     | job summary report
[2025-06-05 14:46:33] 2025-06-05 18:46:18,281 | INFO     | --------------------------------------------------
[2025-06-05 14:46:33] 2025-06-05 18:46:18,281 | INFO     | PanDA job id: 6668440952
[2025-06-05 14:46:33] 2025-06-05 18:46:18,281 | INFO     | task id: 44871837
[2025-06-05 14:46:33] 2025-06-05 18:46:18,281 | INFO     | errors: (none)
[2025-06-05 14:46:33] 2025-06-05 18:46:18,281 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 14:46:33] 2025-06-05 18:46:18,281 | INFO     | pilot state: finished 
[2025-06-05 14:46:33] 2025-06-05 18:46:18,281 | INFO     | transexitcode: 0
[2025-06-05 14:46:33] 2025-06-05 18:46:18,281 | INFO     | exeerrorcode: 0
[2025-06-05 14:46:33] 2025-06-05 18:46:18,281 | INFO     | exeerrordiag: 
[2025-06-05 14:46:33] 2025-06-05 18:46:18,281 | INFO     | exitcode: 0
[2025-06-05 14:46:33] 2025-06-05 18:46:18,281 | INFO     | exitmsg: OK
[2025-06-05 14:46:33] 2025-06-05 18:46:18,281 | INFO     | cpuconsumptiontime: 30494 s
[2025-06-05 14:46:33] 2025-06-05 18:46:18,281 | INFO     | nevents: 400
[2025-06-05 14:46:33] 2025-06-05 18:46:18,281 | INFO     | neventsw: 0
[2025-06-05 14:46:33] 2025-06-05 18:46:18,282 | INFO     | pid: 3482669
[2025-06-05 14:46:33] 2025-06-05 18:46:18,282 | INFO     | pgrp: 3482669
[2025-06-05 14:46:33] 2025-06-05 18:46:18,282 | INFO     | corecount: 8
[2025-06-05 14:46:33] 2025-06-05 18:46:18,282 | INFO     | event service: False
[2025-06-05 14:46:33] 2025-06-05 18:46:18,282 | INFO     | sizes: {0: 2397221, 1: 2397420, 7: 2397626, 11: 2397654, 5158: 2424211, 5159: 2433152, 5160: 2433336, 5166: 2433506}
[2025-06-05 14:46:33] 2025-06-05 18:46:18,282 | INFO     | --------------------------------------------------
[2025-06-05 14:46:33] 2025-06-05 18:46:18,282 | INFO     | 
[2025-06-05 14:46:33] 2025-06-05 18:46:18,282 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-05 14:46:33] 2025-06-05 18:46:18,299 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 14:46:33] 2025-06-05 18:46:18,299 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 14:46:33] 2025-06-05 18:46:18,299 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 14:46:33] 2025-06-05 18:46:18,299 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 14:46:33] 2025-06-05 18:46:18,299 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 14:46:33] 2025-06-05 18:46:18,299 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 14:46:33] 2025-06-05 18:46:18,300 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 14:46:33] 2025-06-05 18:46:18,300 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 14:46:33] 2025-06-05 18:46:18,300 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 14:46:33] 2025-06-05 18:46:18,300 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 14:46:33] 2025-06-05 18:46:18,300 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 14:46:33] 2025-06-05 18:46:18,300 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 14:46:33] 2025-06-05 18:46:18,300 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 14:46:33] 2025-06-05 18:46:18,300 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 14:46:33] 2025-06-05 18:46:18,300 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 14:46:33] 2025-06-05 18:46:18,300 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 14:46:33] 2025-06-05 18:46:18,300 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 14:46:33] 2025-06-05 18:46:18,300 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 14:46:33] 2025-06-05 18:46:18,300 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 14:46:33] 2025-06-05 18:46:18,300 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 14:46:33] 2025-06-05 18:46:18,300 | INFO     | job 6668440952 has completed (purged errors)
[2025-06-05 14:46:33] 2025-06-05 18:46:18,300 | INFO     | overall cleanup function is called
[2025-06-05 14:46:33] 2025-06-05 18:46:19,308 | INFO     | --- collectZombieJob: --- 10, [3482669]
[2025-06-05 14:46:33] 2025-06-05 18:46:19,308 | INFO     | zombie collector waiting for pid 3482669
[2025-06-05 14:46:33] 2025-06-05 18:46:19,308 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 14:46:33] 2025-06-05 18:46:19,308 | INFO     | collected zombie processes
[2025-06-05 14:46:33] 2025-06-05 18:46:19,308 | INFO     | will attempt to kill all subprocesses of pid=3482669
[2025-06-05 14:46:33] 2025-06-05 18:46:19,669 | INFO     | process IDs to be killed: [3482669] (in reverse order)
[2025-06-05 14:46:33] 2025-06-05 18:46:19,813 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 14:46:33] 2025-06-05 18:46:19,813 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 14:46:33] 2025-06-05 18:46:19,836 | INFO     | did not find any defunct processes belonging to 3482669
[2025-06-05 14:46:33] 2025-06-05 18:46:19,856 | INFO     | did not find any defunct processes belonging to 3482669
[2025-06-05 14:46:33] 2025-06-05 18:46:19,857 | INFO     | ready for new job
[2025-06-05 14:46:33] 2025-06-05 18:46:19,857 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 14:46:33] 2025-06-05 18:46:19,858 | INFO     | **************************************
[2025-06-05 14:46:33] 2025-06-05 18:46:19,858 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 14:46:33] 2025-06-05 18:46:19,858 | INFO     | **************************************
[2025-06-05 14:46:33] 2025-06-05 18:46:19,858 | INFO     | 
[2025-06-05 14:46:33] 2025-06-05 18:46:19,875 | INFO     | architecture information:
[2025-06-05 14:46:33] 2025-06-05 18:46:19,875 | INFO     | executing command: cat /etc/os-release
[2025-06-05 14:46:33] 2025-06-05 18:46:19,889 | INFO     | cat /etc/os-release:
[2025-06-05 14:46:33] NAME="CentOS Linux"
[2025-06-05 14:46:33] VERSION="7 (Core)"
[2025-06-05 14:46:33] ID="centos"
[2025-06-05 14:46:33] ID_LIKE="rhel fedora"
[2025-06-05 14:46:33] VERSION_ID="7"
[2025-06-05 14:46:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 14:46:33] ANSI_COLOR="0;31"
[2025-06-05 14:46:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 14:46:33] HOME_URL="https://www.centos.org/"
[2025-06-05 14:46:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 14:46:33] 
[2025-06-05 14:46:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 14:46:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 14:46:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 14:46:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 14:46:33] 
[2025-06-05 14:46:33] 2025-06-05 18:46:19,889 | INFO     | **************************************
[2025-06-05 14:46:33] 2025-06-05 18:46:20,391 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-05 14:46:33] 2025-06-05 18:46:20,406 | INFO     | sufficient remaining disk space (173295009792 B)
[2025-06-05 14:46:33] 2025-06-05 18:46:20,407 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 14:46:33] 2025-06-05 18:46:20,407 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 14:46:33] 2025-06-05 18:46:20,407 | INFO     | update_server=False
[2025-06-05 14:46:33] 2025-06-05 18:46:20,407 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 14:46:33] 2025-06-05 18:46:20,407 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:46:33] 2025-06-05 18:46:20,407 | INFO     | aborting loop
[2025-06-05 14:46:33] 2025-06-05 18:46:20,806 | INFO     | all payload control threads have been joined
[2025-06-05 14:46:33] 2025-06-05 18:46:20,911 | INFO     | all data control threads have been joined
[2025-06-05 14:46:33] 2025-06-05 18:46:21,297 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 14:46:33] 2025-06-05 18:46:21,297 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 14:46:33] 2025-06-05 18:46:21,297 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 14:46:33] 2025-06-05 18:46:21,411 | INFO     | [job] retrieve thread has finished
[2025-06-05 14:46:33] 2025-06-05 18:46:21,412 | INFO     | [job] job monitor thread has finished
[2025-06-05 14:46:33] 2025-06-05 18:46:21,507 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 14:46:33] 2025-06-05 18:46:21,535 | INFO     | [payload] failed_post thread has finished
[2025-06-05 14:46:33] 2025-06-05 18:46:21,662 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 14:46:33] 2025-06-05 18:46:21,811 | INFO     | [payload] control thread has finished
[2025-06-05 14:46:33] 2025-06-05 18:46:21,916 | INFO     | [data] control thread has finished
[2025-06-05 14:46:33] 2025-06-05 18:46:21,919 | INFO     | all job control threads have been joined
[2025-06-05 14:46:33] 2025-06-05 18:46:21,968 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 14:46:33] 2025-06-05 18:46:22,034 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 14:46:33] 2025-06-05 18:46:22,125 | INFO     | [payload] validate_post thread has finished
[2025-06-05 14:46:33] 2025-06-05 18:46:22,358 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 14:46:33] 2025-06-05 18:46:22,558 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 14:46:33] 2025-06-05 18:46:22,608 | INFO     | [data] copytool_in thread has finished
[2025-06-05 14:46:33] 2025-06-05 18:46:22,695 | INFO     | [job] validate thread has finished
[2025-06-05 14:46:33] 2025-06-05 18:46:22,922 | INFO     | [job] control thread has finished
[2025-06-05 14:46:33] 2025-06-05 18:46:23,291 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:46:33] 2025-06-05 18:46:23,512 | INFO     | [data] copytool_out thread has finished
[2025-06-05 14:46:33] 2025-06-05 18:46:24,296 | INFO     | [job] queue monitor thread has finished
[2025-06-05 14:46:33] 2025-06-05 18:46:26,363 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 14:46:33] 2025-06-05 18:46:28,314 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139934249326400)>', '<ExcThread(monitor, started 139933440268032)>']
[2025-06-05 14:46:33] 2025-06-05 18:46:28,332 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 14:46:33] 2025-06-05 18:46:28,332 | INFO     | [monitor] control thread has ended
[2025-06-05 14:46:33] 2025-06-05 18:46:33,340 | INFO     | all workflow threads have been joined
[2025-06-05 14:46:33] 2025-06-05 18:46:33,340 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 14:46:33] 2025-06-05 18:46:33,341 | INFO     | traces error code: 0
[2025-06-05 14:46:33] 2025-06-05 18:46:33,341 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 14:46:33] 2025-06-05 18:46:33,447 [wrapper] ==== pilot stdout END ====
[2025-06-05 14:46:33] 2025-06-05 18:46:33,451 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 14:46:33] 2025-06-05 18:46:33,453 [wrapper] pilotpid: 3457443
[2025-06-05 14:46:33] 2025-06-05 18:46:33,454 [wrapper] Pilot exit status: 0
[2025-06-05 14:46:33] 2025-06-05 18:46:33,465 [wrapper] pandaids: 6668440952
[2025-06-05 14:46:33] 2025-06-05 18:46:33,574 [wrapper] cleanup supervisor_pilot  266922 3457444
[2025-06-05 14:46:33] 2025-06-05 18:46:33,576 [wrapper] Test setup, not cleaning
[2025-06-05 14:46:33] 2025-06-05 18:46:33,581 [wrapper] apfmon messages muted
[2025-06-05 14:46:33] 2025-06-05 18:46:33,584 [wrapper] ==== wrapper stdout END ====
[2025-06-05 14:46:33] 2025-06-05 18:46:33,586 [wrapper] ==== wrapper stderr END ====
[2025-06-05 14:46:33]  *** Error codes and diagnostics ***
[2025-06-05 14:46:33]     "exeErrorCode": 0,
[2025-06-05 14:46:33]     "exeErrorDiag": "",
[2025-06-05 14:46:33]     "pilotErrorCode": 0,
[2025-06-05 14:46:33]     "pilotErrorDiag": "",
[2025-06-05 14:46:33]  *** Listing of results directory ***
[2025-06-05 14:46:33] total 429976
[2025-06-05 14:46:33] -rw-r--r--. 1 boincer umatlas    495897 May 28 07:45 pilot3.tar.gz
[2025-06-05 14:46:33] -rw-r--r--. 1 boincer umatlas      5111 May 28 08:31 queuedata.json
[2025-06-05 14:46:33] -rwx------. 1 boincer umatlas     37140 May 28 08:33 runpilot2-wrapper.sh
[2025-06-05 14:46:33] -rw-r--r--. 1 boincer umatlas       100 Jun  5 13:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 14:46:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 13:19 run_atlas
[2025-06-05 14:46:33] -rw-r--r--. 1 boincer umatlas       105 Jun  5 13:19 job.xml
[2025-06-05 14:46:33] -rw-r--r--. 2 boincer umatlas 225093079 Jun  5 13:19 EVNT.44871834._003288.pool.root.1
[2025-06-05 14:46:33] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 13:19 start_atlas.sh
[2025-06-05 14:46:33] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 13:19 shared
[2025-06-05 14:46:33] -rw-r--r--. 2 boincer umatlas    508885 Jun  5 13:19 input.tar.gz
[2025-06-05 14:46:33] -rw-r--r--. 1 boincer umatlas         0 Jun  5 13:19 boinc_lockfile
[2025-06-05 14:46:33] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 13:19 pandaJob.out
[2025-06-05 14:46:33] -rw-------. 1 boincer umatlas    983229 Jun  5 13:19 agis_schedconf.cvmfs.json
[2025-06-05 14:46:33] -rw-------. 1 boincer umatlas   1598969 Jun  5 13:19 agis_ddmendpoints.agis.ALL.json
[2025-06-05 14:46:33] drwx------. 4 boincer umatlas      4096 Jun  5 13:19 pilot3
[2025-06-05 14:46:33] -rw-r--r--. 1 boincer umatlas      7158 Jun  5 14:37 init_data.xml
[2025-06-05 14:46:33] -rw-------. 1 boincer umatlas        95 Jun  5 14:45 pilot_heartbeat.json
[2025-06-05 14:46:33] -rw-------. 1 boincer umatlas 209773551 Jun  5 14:45 HITS.44871837._084281.pool.root.1
[2025-06-05 14:46:33] -rw-r--r--. 1 boincer umatlas       529 Jun  5 14:45 boinc_task_state.xml
[2025-06-05 14:46:33] -rw-------. 1 boincer umatlas      1048 Jun  5 14:46 memory_monitor_summary.json
[2025-06-05 14:46:33] -rw-------. 1 boincer umatlas    312676 Jun  5 14:46 log.44871837._084281.job.log.tgz.1
[2025-06-05 14:46:33] -rw-------. 1 boincer umatlas      7715 Jun  5 14:46 heartbeat.json
[2025-06-05 14:46:33] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 14:46 boinc_mmap_file
[2025-06-05 14:46:33] -rw-r--r--. 1 boincer umatlas        27 Jun  5 14:46 wrapper_checkpoint.txt
[2025-06-05 14:46:33] -rw-------. 1 boincer umatlas      4354 Jun  5 14:46 pilotlog.txt
[2025-06-05 14:46:33] -rw-------. 1 boincer umatlas    484577 Jun  5 14:46 log.44871837._084281.job.log.1
[2025-06-05 14:46:33] -rw-------. 1 boincer umatlas       357 Jun  5 14:46 output.list
[2025-06-05 14:46:33] -rw-r--r--. 1 boincer umatlas       620 Jun  5 14:46 runtime_log
[2025-06-05 14:46:33] -rw-------. 1 boincer umatlas    819200 Jun  5 14:46 result.tar.gz
[2025-06-05 14:46:33] -rw-r--r--. 1 boincer umatlas      8654 Jun  5 14:46 runtime_log.err
[2025-06-05 14:46:33] -rw-------. 1 boincer umatlas       654 Jun  5 14:46 5l3KDmU9Ue7n9Rq4apOajLDm4fhM0noT9bVof3QYDmLUTKDmNQ29bn.diag
[2025-06-05 14:46:33] -rw-r--r--. 1 boincer umatlas     21243 Jun  5 14:46 stderr.txt
[2025-06-05 14:46:33] HITS file was successfully produced:
[2025-06-05 14:46:33] -rw-------. 1 boincer umatlas 209773551 Jun  5 14:45 shared/HITS.pool.root.1
[2025-06-05 14:46:33]  *** Contents of shared directory: ***
[2025-06-05 14:46:33] total 426000
[2025-06-05 14:46:33] -rw-r--r--. 2 boincer umatlas 225093079 Jun  5 13:19 ATLAS.root_0
[2025-06-05 14:46:33] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 13:19 start_atlas.sh
[2025-06-05 14:46:33] -rw-r--r--. 2 boincer umatlas    508885 Jun  5 13:19 input.tar.gz
[2025-06-05 14:46:33] -rw-------. 1 boincer umatlas 209773551 Jun  5 14:45 HITS.pool.root.1
[2025-06-05 14:46:33] -rw-------. 1 boincer umatlas    819200 Jun  5 14:46 result.tar.gz
14:46:34 (3442165): run_atlas exited; CPU time 30558.545783
14:46:34 (3442165): called boinc_finish(0)

</stderr_txt>
]]>

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