Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:19:14 (26262): wrapper (7.7.26015): starting
13:19:14 (26262): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 13:19:14] Arguments: --nthreads 8
[2025-06-05 13:19:14] Threads: 8
[2025-06-05 13:19:14] Checking for CVMFS
[2025-06-05 13:19:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 13:19:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 13:19:15] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 13:19:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 13:19:15] 2.11.2.0 2790 261 38792 146827 0 1 16514874 20275201 1 130560 0 5997 99.734 77834 49893 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 13:19:15] CVMFS is ok
[2025-06-05 13:19:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 13:19:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 13:19:15] Further information can be found at the LHC@home message board.
[2025-06-05 13:19:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 13:19:15] Checking for apptainer binary...
[2025-06-05 13:19:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 13:19:15] Running /usr/bin/apptainer --version
[2025-06-05 13:19:15] apptainer version 1.3.2-1.el7
[2025-06-05 13:19:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:19:17] c-204-4.aglt2.org
[2025-06-05 13:19:17] apptainer works
[2025-06-05 13:19:17] Set ATHENA_PROC_NUMBER=8
[2025-06-05 13:19:17] Set ATHENA_CORE_NUMBER=8
[2025-06-05 13:19:17] Starting ATLAS job with PandaID=6668440329
[2025-06-05 13:19:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 15:56:51]  *** The last 200 lines of the pilot log: ***
[2025-06-05 15:56:51] 2025-06-05 19:56:25,367 | INFO     | executing command: lscpu
[2025-06-05 15:56:51] 2025-06-05 19:56:25,394 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 15:56:51] 2025-06-05 19:56:26,588 | INFO     | monitor loop #694: job 0:6668440329 is in state 'finished'
[2025-06-05 15:56:51] 2025-06-05 19:56:26,595 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 15:56:51] 2025-06-05 19:56:29,098 | INFO     | monitor loop #695: job 0:6668440329 is in state 'finished'
[2025-06-05 15:56:51] 2025-06-05 19:56:29,098 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 15:56:51] 2025-06-05 19:56:30,889 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 15:56:51] 2025-06-05 19:56:30,890 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668440329/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 15:56:51] 2025-06-05 19:56:30,891 | INFO     | extracted standard info from prmon json
[2025-06-05 15:56:51] 2025-06-05 19:56:30,891 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 15:56:51] 2025-06-05 19:56:30,891 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 15:56:51] 2025-06-05 19:56:30,892 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 15:56:51] 2025-06-05 19:56:30,892 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 15:56:51] 2025-06-05 19:56:30,896 | INFO     | fitting pss+swap vs Time
[2025-06-05 15:56:51] 2025-06-05 19:56:30,896 | INFO     | sum of square deviations: 1132458442.5
[2025-06-05 15:56:51] 2025-06-05 19:56:30,897 | INFO     | sum of deviations: -5177668593.000011
[2025-06-05 15:56:51] 2025-06-05 19:56:30,897 | INFO     | mean x: 1749148677.5
[2025-06-05 15:56:51] 2025-06-05 19:56:30,897 | INFO     | mean y: 2564597.675324675
[2025-06-05 15:56:51] 2025-06-05 19:56:30,897 | INFO     | -- intersect: 7999778298.503252
[2025-06-05 15:56:51] 2025-06-05 19:56:30,897 | INFO     | intersect: 7999778298.503252
[2025-06-05 15:56:51] 2025-06-05 19:56:30,898 | INFO     | chi2: 1.791918438316042
[2025-06-05 15:56:51] 2025-06-05 19:56:30,898 | INFO     | sum of square deviations: 1025693650.0
[2025-06-05 15:56:51] 2025-06-05 19:56:30,899 | INFO     | sum of deviations: -4576205909.000001
[2025-06-05 15:56:51] 2025-06-05 19:56:30,899 | INFO     | mean x: 1749148525.0
[2025-06-05 15:56:51] 2025-06-05 19:56:30,899 | INFO     | mean y: 2565457.120805369
[2025-06-05 15:56:51] 2025-06-05 19:56:30,899 | INFO     | -- intersect: 7806517266.536449
[2025-06-05 15:56:51] 2025-06-05 19:56:30,899 | INFO     | intersect: 7806517266.536449
[2025-06-05 15:56:51] 2025-06-05 19:56:30,899 | INFO     | chi2: 1.7923209215409788
[2025-06-05 15:56:51] 2025-06-05 19:56:30,900 | INFO     | current chi2=1.7923209215409788 (change=-0.022461023690061425 %)
[2025-06-05 15:56:51] 2025-06-05 19:56:30,900 | INFO     | right removable region: 148
[2025-06-05 15:56:51] 2025-06-05 19:56:30,900 | INFO     | sum of square deviations: 1025693650.0
[2025-06-05 15:56:51] 2025-06-05 19:56:30,901 | INFO     | sum of deviations: -30568237161.999996
[2025-06-05 15:56:51] 2025-06-05 19:56:30,901 | INFO     | mean x: 1749148830.0
[2025-06-05 15:56:51] 2025-06-05 19:56:30,901 | INFO     | mean y: 2600357.302013423
[2025-06-05 15:56:51] 2025-06-05 19:56:30,901 | INFO     | -- intersect: 52131612043.27162
[2025-06-05 15:56:51] 2025-06-05 19:56:30,901 | INFO     | intersect: 52131612043.27162
[2025-06-05 15:56:51] 2025-06-05 19:56:30,902 | INFO     | chi2: 0.17070864598039343
[2025-06-05 15:56:51] 2025-06-05 19:56:30,902 | INFO     | current chi2=0.17070864598039343 (change=90.47341428436792 %)
[2025-06-05 15:56:51] 2025-06-05 19:56:30,902 | INFO     | sum of square deviations: 925859220.0
[2025-06-05 15:56:51] 2025-06-05 19:56:30,903 | INFO     | sum of deviations: -30237329790.99999
[2025-06-05 15:56:51] 2025-06-05 19:56:30,903 | INFO     | mean x: 1749148982.5
[2025-06-05 15:56:51] 2025-06-05 19:56:30,903 | INFO     | mean y: 2599763.9583333335
[2025-06-05 15:56:51] 2025-06-05 19:56:30,903 | INFO     | -- intersect: 57127477385.68205
[2025-06-05 15:56:51] 2025-06-05 19:56:30,903 | INFO     | intersect: 57127477385.68205
[2025-06-05 15:56:51] 2025-06-05 19:56:30,903 | INFO     | chi2: 0.14553687806712534
[2025-06-05 15:56:51] 2025-06-05 19:56:30,904 | INFO     | current chi2=0.14553687806712534 (change=14.745455784447593 %)
[2025-06-05 15:56:51] 2025-06-05 19:56:30,904 | INFO     | left removable region: 20
[2025-06-05 15:56:51] 2025-06-05 19:56:30,904 | INFO     | sum of square deviations: 650252192.0
[2025-06-05 15:56:51] 2025-06-05 19:56:30,905 | INFO     | sum of deviations: -20988945880.0
[2025-06-05 15:56:51] 2025-06-05 19:56:30,905 | INFO     | mean x: 1749149104.5
[2025-06-05 15:56:51] 2025-06-05 19:56:30,905 | INFO     | mean y: 2588154.609375
[2025-06-05 15:56:51] 2025-06-05 19:56:30,905 | INFO     | -- intersect: 56461907080.52076
[2025-06-05 15:56:51] 2025-06-05 19:56:30,905 | INFO     | intersect: 56461907080.52076
[2025-06-05 15:56:51] 2025-06-05 19:56:30,905 | INFO     | chi2: 0.13506135910964653
[2025-06-05 15:56:51] 2025-06-05 19:56:30,905 | INFO     | -- intersect: 56461907080.52076
[2025-06-05 15:56:51] 2025-06-05 19:56:30,906 | INFO     | current memory leak: -32.28 B/s (using 128 data points, chi2=0.14)
[2025-06-05 15:56:51] 2025-06-05 19:56:30,906 | INFO     | ..............................
[2025-06-05 15:56:51] 2025-06-05 19:56:30,906 | INFO     | . Timing measurements:
[2025-06-05 15:56:51] 2025-06-05 19:56:30,906 | INFO     | . get job = 0 s
[2025-06-05 15:56:51] 2025-06-05 19:56:30,906 | INFO     | . initial setup = 3 s
[2025-06-05 15:56:51] 2025-06-05 19:56:30,907 | INFO     | . payload setup = 13 s
[2025-06-05 15:56:51] 2025-06-05 19:56:30,907 | INFO     | . stage-in = 0 s
[2025-06-05 15:56:51] 2025-06-05 19:56:30,907 | INFO     | . payload execution = 9370 s
[2025-06-05 15:56:51] 2025-06-05 19:56:30,907 | INFO     | . stage-out = 0 s
[2025-06-05 15:56:51] 2025-06-05 19:56:30,907 | INFO     | . log creation = 0 s
[2025-06-05 15:56:51] 2025-06-05 19:56:30,907 | INFO     | ..............................
[2025-06-05 15:56:51] 2025-06-05 19:56:31,363 | INFO     | 
[2025-06-05 15:56:51] 2025-06-05 19:56:31,363 | INFO     | job summary report
[2025-06-05 15:56:51] 2025-06-05 19:56:31,363 | INFO     | --------------------------------------------------
[2025-06-05 15:56:51] 2025-06-05 19:56:31,363 | INFO     | PanDA job id: 6668440329
[2025-06-05 15:56:51] 2025-06-05 19:56:31,364 | INFO     | task id: 44871837
[2025-06-05 15:56:51] 2025-06-05 19:56:31,364 | INFO     | errors: (none)
[2025-06-05 15:56:51] 2025-06-05 19:56:31,364 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 15:56:51] 2025-06-05 19:56:31,364 | INFO     | pilot state: finished 
[2025-06-05 15:56:51] 2025-06-05 19:56:31,364 | INFO     | transexitcode: 0
[2025-06-05 15:56:51] 2025-06-05 19:56:31,364 | INFO     | exeerrorcode: 0
[2025-06-05 15:56:51] 2025-06-05 19:56:31,365 | INFO     | exeerrordiag: 
[2025-06-05 15:56:51] 2025-06-05 19:56:31,365 | INFO     | exitcode: 0
[2025-06-05 15:56:51] 2025-06-05 19:56:31,365 | INFO     | exitmsg: OK
[2025-06-05 15:56:51] 2025-06-05 19:56:31,365 | INFO     | cpuconsumptiontime: 70744 s
[2025-06-05 15:56:51] 2025-06-05 19:56:31,365 | INFO     | nevents: 400
[2025-06-05 15:56:51] 2025-06-05 19:56:31,365 | INFO     | neventsw: 0
[2025-06-05 15:56:51] 2025-06-05 19:56:31,366 | INFO     | pid: 5585
[2025-06-05 15:56:51] 2025-06-05 19:56:31,366 | INFO     | pgrp: 5585
[2025-06-05 15:56:51] 2025-06-05 19:56:31,366 | INFO     | corecount: 8
[2025-06-05 15:56:51] 2025-06-05 19:56:31,366 | INFO     | event service: False
[2025-06-05 15:56:51] 2025-06-05 19:56:31,366 | INFO     | sizes: {0: 2397221, 1: 2397420, 7: 2397626, 11: 2397654, 9388: 2425829, 9389: 2434770, 9390: 2434954, 9398: 2435124}
[2025-06-05 15:56:51] 2025-06-05 19:56:31,367 | INFO     | --------------------------------------------------
[2025-06-05 15:56:51] 2025-06-05 19:56:31,367 | INFO     | 
[2025-06-05 15:56:51] 2025-06-05 19:56:31,367 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 15:56:51] 2025-06-05 19:56:31,397 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 15:56:51] 2025-06-05 19:56:31,398 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 15:56:51] 2025-06-05 19:56:31,398 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 15:56:51] 2025-06-05 19:56:31,398 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 15:56:51] 2025-06-05 19:56:31,398 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 15:56:51] 2025-06-05 19:56:31,399 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 15:56:51] 2025-06-05 19:56:31,399 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 15:56:51] 2025-06-05 19:56:31,399 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 15:56:51] 2025-06-05 19:56:31,399 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 15:56:51] 2025-06-05 19:56:31,399 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 15:56:51] 2025-06-05 19:56:31,400 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 15:56:51] 2025-06-05 19:56:31,400 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 15:56:51] 2025-06-05 19:56:31,400 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 15:56:51] 2025-06-05 19:56:31,400 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 15:56:51] 2025-06-05 19:56:31,400 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 15:56:51] 2025-06-05 19:56:31,401 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 15:56:51] 2025-06-05 19:56:31,401 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 15:56:51] 2025-06-05 19:56:31,401 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 15:56:51] 2025-06-05 19:56:31,401 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 15:56:51] 2025-06-05 19:56:31,401 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 15:56:51] 2025-06-05 19:56:31,402 | INFO     | job 6668440329 has completed (purged errors)
[2025-06-05 15:56:51] 2025-06-05 19:56:31,402 | INFO     | overall cleanup function is called
[2025-06-05 15:56:51] 2025-06-05 19:56:32,410 | INFO     | --- collectZombieJob: --- 10, [5585]
[2025-06-05 15:56:51] 2025-06-05 19:56:32,410 | INFO     | zombie collector waiting for pid 5585
[2025-06-05 15:56:51] 2025-06-05 19:56:32,418 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 15:56:51] 2025-06-05 19:56:32,419 | INFO     | collected zombie processes
[2025-06-05 15:56:51] 2025-06-05 19:56:32,419 | INFO     | will attempt to kill all subprocesses of pid=5585
[2025-06-05 15:56:51] 2025-06-05 19:56:32,508 | INFO     | process IDs to be killed: [5585] (in reverse order)
[2025-06-05 15:56:51] 2025-06-05 19:56:32,564 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 15:56:51] 2025-06-05 19:56:32,565 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 15:56:51] 2025-06-05 19:56:32,569 | INFO     | did not find any defunct processes belonging to 5585
[2025-06-05 15:56:51] 2025-06-05 19:56:32,573 | INFO     | did not find any defunct processes belonging to 5585
[2025-06-05 15:56:51] 2025-06-05 19:56:32,574 | INFO     | ready for new job
[2025-06-05 15:56:51] 2025-06-05 19:56:32,574 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 15:56:51] 2025-06-05 19:56:32,575 | INFO     | **************************************
[2025-06-05 15:56:51] 2025-06-05 19:56:32,576 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 15:56:51] 2025-06-05 19:56:32,576 | INFO     | **************************************
[2025-06-05 15:56:51] 2025-06-05 19:56:32,576 | INFO     | 
[2025-06-05 15:56:51] 2025-06-05 19:56:32,576 | INFO     | architecture information:
[2025-06-05 15:56:51] 2025-06-05 19:56:32,577 | INFO     | executing command: cat /etc/os-release
[2025-06-05 15:56:51] 2025-06-05 19:56:32,594 | INFO     | cat /etc/os-release:
[2025-06-05 15:56:51] NAME="CentOS Linux"
[2025-06-05 15:56:51] VERSION="7 (Core)"
[2025-06-05 15:56:51] ID="centos"
[2025-06-05 15:56:51] ID_LIKE="rhel fedora"
[2025-06-05 15:56:51] VERSION_ID="7"
[2025-06-05 15:56:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 15:56:51] ANSI_COLOR="0;31"
[2025-06-05 15:56:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 15:56:51] HOME_URL="https://www.centos.org/"
[2025-06-05 15:56:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 15:56:51] 
[2025-06-05 15:56:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 15:56:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 15:56:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 15:56:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 15:56:51] 
[2025-06-05 15:56:51] 2025-06-05 19:56:32,594 | INFO     | **************************************
[2025-06-05 15:56:51] 2025-06-05 19:56:33,097 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 15:56:51] 2025-06-05 19:56:33,116 | INFO     | sufficient remaining disk space (18611175424 B)
[2025-06-05 15:56:51] 2025-06-05 19:56:33,117 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 15:56:51] 2025-06-05 19:56:33,117 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 15:56:51] 2025-06-05 19:56:33,117 | INFO     | update_server=False
[2025-06-05 15:56:51] 2025-06-05 19:56:33,117 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 15:56:51] 2025-06-05 19:56:33,118 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:56:51] 2025-06-05 19:56:33,118 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 15:56:51] 2025-06-05 19:56:33,118 | INFO     | aborting loop
[2025-06-05 15:56:51] 2025-06-05 19:56:33,169 | INFO     | all payload control threads have been joined
[2025-06-05 15:56:51] 2025-06-05 19:56:33,220 | INFO     | PID=30021 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 15:56:51] 2025-06-05 19:56:33,220 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 15:56:51] 2025-06-05 19:56:33,220 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 15:56:51] 2025-06-05 19:56:33,220 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 15:56:51] 2025-06-05 19:56:34,121 | INFO     | [job] job monitor thread has finished
[2025-06-05 15:56:51] 2025-06-05 19:56:34,123 | INFO     | [job] retrieve thread has finished
[2025-06-05 15:56:51] 2025-06-05 19:56:34,153 | INFO     | all data control threads have been joined
[2025-06-05 15:56:51] 2025-06-05 19:56:34,175 | INFO     | [payload] control thread has finished
[2025-06-05 15:56:51] 2025-06-05 19:56:34,427 | INFO     | [payload] validate_post thread has finished
[2025-06-05 15:56:51] 2025-06-05 19:56:34,482 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 15:56:51] 2025-06-05 19:56:34,504 | INFO     | [job] validate thread has finished
[2025-06-05 15:56:51] 2025-06-05 19:56:34,555 | INFO     | all job control threads have been joined
[2025-06-05 15:56:51] 2025-06-05 19:56:34,614 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 15:56:51] 2025-06-05 19:56:34,624 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 15:56:51] 2025-06-05 19:56:34,847 | INFO     | [data] copytool_in thread has finished
[2025-06-05 15:56:51] 2025-06-05 19:56:35,090 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 15:56:51] 2025-06-05 19:56:35,159 | INFO     | [data] control thread has finished
[2025-06-05 15:56:51] 2025-06-05 19:56:35,401 | INFO     | [payload] failed_post thread has finished
[2025-06-05 15:56:51] 2025-06-05 19:56:35,560 | INFO     | [job] control thread has finished
[2025-06-05 15:56:51] 2025-06-05 19:56:36,010 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:56:51] 2025-06-05 19:56:36,620 | INFO     | [data] copytool_out thread has finished
[2025-06-05 15:56:51] 2025-06-05 19:56:37,013 | INFO     | [job] queue monitor thread has finished
[2025-06-05 15:56:51] 2025-06-05 19:56:37,125 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 15:56:51] 2025-06-05 19:56:43,690 | INFO     | job.realtimelogging is not enabled
[2025-06-05 15:56:51] 2025-06-05 19:56:44,695 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 15:56:51] 2025-06-05 19:56:46,308 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140332497876800)>', '<ExcThread(monitor, started 140332050134784)>']
[2025-06-05 15:56:51] 2025-06-05 19:56:47,290 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 15:56:51] 2025-06-05 19:56:47,290 | INFO     | [monitor] control thread has ended
[2025-06-05 15:56:51] 2025-06-05 19:56:51,312 | INFO     | all workflow threads have been joined
[2025-06-05 15:56:51] 2025-06-05 19:56:51,313 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 15:56:51] 2025-06-05 19:56:51,313 | INFO     | traces error code: 0
[2025-06-05 15:56:51] 2025-06-05 19:56:51,313 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 15:56:51] 2025-06-05 19:56:51,417 [wrapper] ==== pilot stdout END ====
[2025-06-05 15:56:51] 2025-06-05 19:56:51,422 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 15:56:51] 2025-06-05 19:56:51,427 [wrapper] pilotpid: 30021
[2025-06-05 15:56:51] 2025-06-05 19:56:51,431 [wrapper] Pilot exit status: 0
[2025-06-05 15:56:51] 2025-06-05 19:56:51,464 [wrapper] pandaids: 6668440329
[2025-06-05 15:56:51] 2025-06-05 19:56:51,509 [wrapper] cleanup supervisor_pilot 25080 30022
[2025-06-05 15:56:51] 2025-06-05 19:56:51,514 [wrapper] Test setup, not cleaning
[2025-06-05 15:56:51] 2025-06-05 19:56:51,519 [wrapper] apfmon messages muted
[2025-06-05 15:56:51] 2025-06-05 19:56:51,524 [wrapper] ==== wrapper stdout END ====
[2025-06-05 15:56:51] 2025-06-05 19:56:51,528 [wrapper] ==== wrapper stderr END ====
[2025-06-05 15:56:51]  *** Error codes and diagnostics ***
[2025-06-05 15:56:51]     "exeErrorCode": 0,
[2025-06-05 15:56:51]     "exeErrorDiag": "",
[2025-06-05 15:56:51]     "pilotErrorCode": 0,
[2025-06-05 15:56:51]     "pilotErrorDiag": "",
[2025-06-05 15:56:51]  *** Listing of results directory ***
[2025-06-05 15:56:51] total 416180
[2025-06-05 15:56:51] -rwx------ 1 boincer umatlas     37140 May 28 07:45 runpilot2-wrapper.sh
[2025-06-05 15:56:51] -rw-r--r-- 1 boincer umatlas      5111 May 28 07:45 queuedata.json
[2025-06-05 15:56:51] -rw-r--r-- 1 boincer umatlas    495897 May 28 07:45 pilot3.tar.gz
[2025-06-05 15:56:51] -rw-r--r-- 1 boincer umatlas       100 Jun  5 13:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 15:56:51] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 13:19 run_atlas
[2025-06-05 15:56:51] -rw-r--r-- 1 boincer umatlas       105 Jun  5 13:19 job.xml
[2025-06-05 15:56:51] -rw-r--r-- 2 boincer umatlas 223016703 Jun  5 13:19 EVNT.44871834._003274.pool.root.1
[2025-06-05 15:56:51] -rw-r--r-- 2 boincer umatlas    508874 Jun  5 13:19 input.tar.gz
[2025-06-05 15:56:51] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 13:19 start_atlas.sh
[2025-06-05 15:56:51] drwxrwx--x 2 boincer umatlas      4096 Jun  5 13:19 shared
[2025-06-05 15:56:51] -rw-r--r-- 1 boincer umatlas         0 Jun  5 13:19 boinc_lockfile
[2025-06-05 15:56:51] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 13:19 pandaJob.out
[2025-06-05 15:56:51] -rw------- 1 boincer umatlas    983229 Jun  5 13:19 agis_schedconf.cvmfs.json
[2025-06-05 15:56:51] -rw------- 1 boincer umatlas   1598969 Jun  5 13:19 agis_ddmendpoints.agis.ALL.json
[2025-06-05 15:56:51] drwx------ 4 boincer umatlas      4096 Jun  5 13:19 pilot3
[2025-06-05 15:56:51] -rw-r--r-- 1 boincer umatlas      5822 Jun  5 15:49 init_data.xml
[2025-06-05 15:56:51] -rw------- 1 boincer umatlas        95 Jun  5 15:55 pilot_heartbeat.json
[2025-06-05 15:56:51] -rw------- 1 boincer umatlas 196903431 Jun  5 15:55 HITS.44871837._083939.pool.root.1
[2025-06-05 15:56:51] -rw-r--r-- 1 boincer umatlas       530 Jun  5 15:56 boinc_task_state.xml
[2025-06-05 15:56:51] -rw------- 1 boincer umatlas      1048 Jun  5 15:56 memory_monitor_summary.json
[2025-06-05 15:56:51] -rw------- 1 boincer umatlas    362292 Jun  5 15:56 log.44871837._083939.job.log.tgz.1
[2025-06-05 15:56:51] -rw------- 1 boincer umatlas      7747 Jun  5 15:56 heartbeat.json
[2025-06-05 15:56:51] -rw-r--r-- 1 boincer umatlas        27 Jun  5 15:56 wrapper_checkpoint.txt
[2025-06-05 15:56:51] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 15:56 boinc_mmap_file
[2025-06-05 15:56:51] -rw------- 1 boincer umatlas      4742 Jun  5 15:56 pilotlog.txt
[2025-06-05 15:56:51] -rw------- 1 boincer umatlas    849003 Jun  5 15:56 log.44871837._083939.job.log.1
[2025-06-05 15:56:51] -rw------- 1 boincer umatlas       357 Jun  5 15:56 output.list
[2025-06-05 15:56:51] -rw-r--r-- 1 boincer umatlas       620 Jun  5 15:56 runtime_log
[2025-06-05 15:56:51] -rw------- 1 boincer umatlas   1228800 Jun  5 15:56 result.tar.gz
[2025-06-05 15:56:51] -rw------- 1 boincer umatlas       660 Jun  5 15:56 uuWKDm6OUe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmITTKDmbgJKPn.diag
[2025-06-05 15:56:51] -rw-r--r-- 1 boincer umatlas      8654 Jun  5 15:56 runtime_log.err
[2025-06-05 15:56:51] -rw-r--r-- 1 boincer umatlas     21158 Jun  5 15:56 stderr.txt
[2025-06-05 15:56:51] HITS file was successfully produced:
[2025-06-05 15:56:51] -rw------- 1 boincer umatlas 196903431 Jun  5 15:55 shared/HITS.pool.root.1
[2025-06-05 15:56:51]  *** Contents of shared directory: ***
[2025-06-05 15:56:51] total 411800
[2025-06-05 15:56:51] -rw-r--r-- 2 boincer umatlas 223016703 Jun  5 13:19 ATLAS.root_0
[2025-06-05 15:56:51] -rw-r--r-- 2 boincer umatlas    508874 Jun  5 13:19 input.tar.gz
[2025-06-05 15:56:51] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 13:19 start_atlas.sh
[2025-06-05 15:56:51] -rw------- 1 boincer umatlas 196903431 Jun  5 15:55 HITS.pool.root.1
[2025-06-05 15:56:51] -rw------- 1 boincer umatlas   1228800 Jun  5 15:56 result.tar.gz
15:56:53 (26262): run_atlas exited; CPU time 70746.125227
15:56:53 (26262): called boinc_finish(0)

</stderr_txt>
]]>

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