Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:19:18 (1686558): wrapper (7.7.26015): starting
13:19:18 (1686558): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 13:19:19] Arguments: --nthreads 8
[2025-06-05 13:19:19] Threads: 8
[2025-06-05 13:19:19] Checking for CVMFS
[2025-06-05 13:19:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 13:19:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 13:19:19] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 13:19:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 13:19:19] 2.12.6.0 8521 39039 501144 146827 2 79 33037683 40960001 27438 16776704 1 362094515 99.743 240762651 19179 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 13:19:19] CVMFS is ok
[2025-06-05 13:19:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 13:19:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 13:19:19] Further information can be found at the LHC@home message board.
[2025-06-05 13:19:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 13:19:19] Checking for apptainer binary...
[2025-06-05 13:19:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 13:19:19] Running /usr/bin/apptainer --version
[2025-06-05 13:19:19] apptainer version 1.4.1-1.el9
[2025-06-05 13:19:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:19:20] c7-4-30.aglt2.org
[2025-06-05 13:19:20] apptainer works
[2025-06-05 13:19:20] Set ATHENA_PROC_NUMBER=8
[2025-06-05 13:19:20] Set ATHENA_CORE_NUMBER=8
[2025-06-05 13:19:20] Starting ATLAS job with PandaID=6668327131
[2025-06-05 13:19:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 15:36:40]  *** The last 200 lines of the pilot log: ***
[2025-06-05 15:36:40] 2025-06-05 19:36:27,637 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6668327131/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 15:36:40] 2025-06-05 19:36:27,638 | INFO     | extracted standard info from prmon json
[2025-06-05 15:36:40] 2025-06-05 19:36:27,638 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 15:36:40] 2025-06-05 19:36:27,638 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 15:36:40] 2025-06-05 19:36:27,638 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 15:36:40] 2025-06-05 19:36:27,638 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 15:36:40] 2025-06-05 19:36:27,639 | INFO     | fitting pss+swap vs Time
[2025-06-05 15:36:40] 2025-06-05 19:36:27,639 | INFO     | sum of square deviations: 746051197.5
[2025-06-05 15:36:40] 2025-06-05 19:36:27,640 | INFO     | sum of deviations: 1269839013.000001
[2025-06-05 15:36:40] 2025-06-05 19:36:27,640 | INFO     | mean x: 1749148106.5
[2025-06-05 15:36:40] 2025-06-05 19:36:27,640 | INFO     | mean y: 2174511.2089552237
[2025-06-05 15:36:40] 2025-06-05 19:36:27,640 | INFO     | -- intersect: -2975015945.145457
[2025-06-05 15:36:40] 2025-06-05 19:36:27,640 | INFO     | intersect: -2975015945.145457
[2025-06-05 15:36:40] 2025-06-05 19:36:27,640 | INFO     | chi2: 2.5571687586040976
[2025-06-05 15:36:40] 2025-06-05 19:36:27,640 | INFO     | sum of square deviations: 665612480.0
[2025-06-05 15:36:40] 2025-06-05 19:36:27,641 | INFO     | sum of deviations: 8804817775.0
[2025-06-05 15:36:40] 2025-06-05 19:36:27,641 | INFO     | mean x: 1749147954.0
[2025-06-05 15:36:40] 2025-06-05 19:36:27,641 | INFO     | mean y: 2188418.480620155
[2025-06-05 15:36:40] 2025-06-05 19:36:27,641 | INFO     | -- intersect: -23135792703.03333
[2025-06-05 15:36:40] 2025-06-05 19:36:27,641 | INFO     | intersect: -23135792703.03333
[2025-06-05 15:36:40] 2025-06-05 19:36:27,641 | INFO     | chi2: 1.9142125218661614
[2025-06-05 15:36:40] 2025-06-05 19:36:27,641 | INFO     | current chi2=1.9142125218661614 (change=25.14328530624283 %)
[2025-06-05 15:36:40] 2025-06-05 19:36:27,641 | INFO     | sum of square deviations: 591173875.0
[2025-06-05 15:36:40] 2025-06-05 19:36:27,641 | INFO     | sum of deviations: 9259259295.999996
[2025-06-05 15:36:40] 2025-06-05 19:36:27,642 | INFO     | mean x: 1749147801.5
[2025-06-05 15:36:40] 2025-06-05 19:36:27,642 | INFO     | mean y: 2189332.1774193547
[2025-06-05 15:36:40] 2025-06-05 19:36:27,642 | INFO     | -- intersect: -27393833607.971672
[2025-06-05 15:36:40] 2025-06-05 19:36:27,642 | INFO     | intersect: -27393833607.971672
[2025-06-05 15:36:40] 2025-06-05 19:36:27,642 | INFO     | chi2: 1.9159935668692158
[2025-06-05 15:36:40] 2025-06-05 19:36:27,642 | INFO     | current chi2=1.9159935668692158 (change=-0.09304322183192543 %)
[2025-06-05 15:36:40] 2025-06-05 19:36:27,642 | INFO     | right removable region: 123
[2025-06-05 15:36:40] 2025-06-05 19:36:27,642 | INFO     | sum of square deviations: 665612480.0
[2025-06-05 15:36:40] 2025-06-05 19:36:27,642 | INFO     | sum of deviations: -19972413149.0
[2025-06-05 15:36:40] 2025-06-05 19:36:27,642 | INFO     | mean x: 1749148259.0
[2025-06-05 15:36:40] 2025-06-05 19:36:27,642 | INFO     | mean y: 2214297.19379845
[2025-06-05 15:36:40] 2025-06-05 19:36:27,642 | INFO     | -- intersect: 52487275406.02707
[2025-06-05 15:36:40] 2025-06-05 19:36:27,642 | INFO     | intersect: 52487275406.02707
[2025-06-05 15:36:40] 2025-06-05 19:36:27,643 | INFO     | chi2: 0.8446820045118258
[2025-06-05 15:36:40] 2025-06-05 19:36:27,643 | INFO     | current chi2=0.8446820045118258 (change=66.96807742274628 %)
[2025-06-05 15:36:40] 2025-06-05 19:36:27,643 | INFO     | sum of square deviations: 591173875.0
[2025-06-05 15:36:40] 2025-06-05 19:36:27,643 | INFO     | sum of deviations: -22073763810.5
[2025-06-05 15:36:40] 2025-06-05 19:36:27,643 | INFO     | mean x: 1749148411.5
[2025-06-05 15:36:40] 2025-06-05 19:36:27,643 | INFO     | mean y: 2218468.4919354836
[2025-06-05 15:36:40] 2025-06-05 19:36:27,643 | INFO     | -- intersect: 65313441676.659355
[2025-06-05 15:36:40] 2025-06-05 19:36:27,643 | INFO     | intersect: 65313441676.659355
[2025-06-05 15:36:40] 2025-06-05 19:36:27,643 | INFO     | chi2: 0.7721035810543792
[2025-06-05 15:36:40] 2025-06-05 19:36:27,643 | INFO     | current chi2=0.7721035810543792 (change=8.592396081575403 %)
[2025-06-05 15:36:40] 2025-06-05 19:36:27,643 | INFO     | left removable region: 20
[2025-06-05 15:36:40] 2025-06-05 19:36:27,644 | INFO     | sum of square deviations: 338804492.0
[2025-06-05 15:36:40] 2025-06-05 19:36:27,644 | INFO     | sum of deviations: -8617172564.0
[2025-06-05 15:36:40] 2025-06-05 19:36:27,644 | INFO     | mean x: 1749148381.0
[2025-06-05 15:36:40] 2025-06-05 19:36:27,644 | INFO     | mean y: 2228656.504854369
[2025-06-05 15:36:40] 2025-06-05 19:36:27,644 | INFO     | -- intersect: 44490167261.280556
[2025-06-05 15:36:40] 2025-06-05 19:36:27,644 | INFO     | intersect: 44490167261.280556
[2025-06-05 15:36:40] 2025-06-05 19:36:27,644 | INFO     | chi2: 0.09235341012935018
[2025-06-05 15:36:40] 2025-06-05 19:36:27,644 | INFO     | -- intersect: 44490167261.280556
[2025-06-05 15:36:40] 2025-06-05 19:36:27,644 | INFO     | current memory leak: -25.43 B/s (using 103 data points, chi2=0.09)
[2025-06-05 15:36:40] 2025-06-05 19:36:27,644 | INFO     | ..............................
[2025-06-05 15:36:40] 2025-06-05 19:36:27,645 | INFO     | . Timing measurements:
[2025-06-05 15:36:40] 2025-06-05 19:36:27,645 | INFO     | . get job = 0 s
[2025-06-05 15:36:40] 2025-06-05 19:36:27,645 | INFO     | . initial setup = 3 s
[2025-06-05 15:36:40] 2025-06-05 19:36:27,645 | INFO     | . payload setup = 18 s
[2025-06-05 15:36:40] 2025-06-05 19:36:27,645 | INFO     | . stage-in = 0 s
[2025-06-05 15:36:40] 2025-06-05 19:36:27,645 | INFO     | . payload execution = 8140 s
[2025-06-05 15:36:40] 2025-06-05 19:36:27,645 | INFO     | . stage-out = 0 s
[2025-06-05 15:36:40] 2025-06-05 19:36:27,645 | INFO     | . log creation = 0 s
[2025-06-05 15:36:40] 2025-06-05 19:36:27,645 | INFO     | ..............................
[2025-06-05 15:36:40] 2025-06-05 19:36:27,848 | INFO     | 
[2025-06-05 15:36:40] 2025-06-05 19:36:27,848 | INFO     | job summary report
[2025-06-05 15:36:40] 2025-06-05 19:36:27,848 | INFO     | --------------------------------------------------
[2025-06-05 15:36:40] 2025-06-05 19:36:27,848 | INFO     | PanDA job id: 6668327131
[2025-06-05 15:36:40] 2025-06-05 19:36:27,848 | INFO     | task id: 44871837
[2025-06-05 15:36:40] 2025-06-05 19:36:27,849 | INFO     | errors: (none)
[2025-06-05 15:36:40] 2025-06-05 19:36:27,849 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 15:36:40] 2025-06-05 19:36:27,849 | INFO     | pilot state: finished 
[2025-06-05 15:36:40] 2025-06-05 19:36:27,849 | INFO     | transexitcode: 0
[2025-06-05 15:36:40] 2025-06-05 19:36:27,849 | INFO     | exeerrorcode: 0
[2025-06-05 15:36:40] 2025-06-05 19:36:27,849 | INFO     | exeerrordiag: 
[2025-06-05 15:36:40] 2025-06-05 19:36:27,849 | INFO     | exitcode: 0
[2025-06-05 15:36:40] 2025-06-05 19:36:27,849 | INFO     | exitmsg: OK
[2025-06-05 15:36:40] 2025-06-05 19:36:27,849 | INFO     | cpuconsumptiontime: 41023 s
[2025-06-05 15:36:40] 2025-06-05 19:36:27,849 | INFO     | nevents: 400
[2025-06-05 15:36:40] 2025-06-05 19:36:27,849 | INFO     | neventsw: 0
[2025-06-05 15:36:40] 2025-06-05 19:36:27,849 | INFO     | pid: 1716326
[2025-06-05 15:36:40] 2025-06-05 19:36:27,849 | INFO     | pgrp: 1716326
[2025-06-05 15:36:40] 2025-06-05 19:36:27,849 | INFO     | corecount: 8
[2025-06-05 15:36:40] 2025-06-05 19:36:27,849 | INFO     | event service: False
[2025-06-05 15:36:40] 2025-06-05 19:36:27,850 | INFO     | sizes: {0: 2397220, 1: 2397419, 11: 2397625, 12: 2397653, 22: 2397681, 8163: 2425579, 8164: 2434576, 8169: 2434690}
[2025-06-05 15:36:40] 2025-06-05 19:36:27,850 | INFO     | --------------------------------------------------
[2025-06-05 15:36:40] 2025-06-05 19:36:27,850 | INFO     | 
[2025-06-05 15:36:40] 2025-06-05 19:36:27,850 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-05 15:36:40] 2025-06-05 19:36:27,870 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 15:36:40] 2025-06-05 19:36:27,870 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 15:36:40] 2025-06-05 19:36:27,870 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 15:36:40] 2025-06-05 19:36:27,870 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 15:36:40] 2025-06-05 19:36:27,870 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 15:36:40] 2025-06-05 19:36:27,870 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 15:36:40] 2025-06-05 19:36:27,870 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 15:36:40] 2025-06-05 19:36:27,870 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 15:36:40] 2025-06-05 19:36:27,870 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 15:36:40] 2025-06-05 19:36:27,870 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 15:36:40] 2025-06-05 19:36:27,870 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 15:36:40] 2025-06-05 19:36:27,870 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 15:36:40] 2025-06-05 19:36:27,871 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 15:36:40] 2025-06-05 19:36:27,871 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 15:36:40] 2025-06-05 19:36:27,871 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 15:36:40] 2025-06-05 19:36:27,871 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 15:36:40] 2025-06-05 19:36:27,871 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 15:36:40] 2025-06-05 19:36:27,871 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 15:36:40] 2025-06-05 19:36:27,871 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 15:36:40] 2025-06-05 19:36:27,871 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 15:36:40] 2025-06-05 19:36:27,871 | INFO     | job 6668327131 has completed (purged errors)
[2025-06-05 15:36:40] 2025-06-05 19:36:27,871 | INFO     | overall cleanup function is called
[2025-06-05 15:36:40] 2025-06-05 19:36:28,880 | INFO     | --- collectZombieJob: --- 10, [1716326]
[2025-06-05 15:36:40] 2025-06-05 19:36:28,880 | INFO     | zombie collector waiting for pid 1716326
[2025-06-05 15:36:40] 2025-06-05 19:36:28,880 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 15:36:40] 2025-06-05 19:36:28,880 | INFO     | collected zombie processes
[2025-06-05 15:36:40] 2025-06-05 19:36:28,880 | INFO     | will attempt to kill all subprocesses of pid=1716326
[2025-06-05 15:36:40] 2025-06-05 19:36:29,292 | INFO     | process IDs to be killed: [1716326] (in reverse order)
[2025-06-05 15:36:40] 2025-06-05 19:36:29,414 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 15:36:40] 2025-06-05 19:36:29,414 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 15:36:40] 2025-06-05 19:36:29,430 | INFO     | did not find any defunct processes belonging to 1716326
[2025-06-05 15:36:40] 2025-06-05 19:36:29,447 | INFO     | did not find any defunct processes belonging to 1716326
[2025-06-05 15:36:40] 2025-06-05 19:36:29,448 | INFO     | ready for new job
[2025-06-05 15:36:40] 2025-06-05 19:36:29,448 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 15:36:40] 2025-06-05 19:36:29,449 | INFO     | **************************************
[2025-06-05 15:36:40] 2025-06-05 19:36:29,451 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 15:36:40] 2025-06-05 19:36:29,451 | INFO     | **************************************
[2025-06-05 15:36:40] 2025-06-05 19:36:29,451 | INFO     | 
[2025-06-05 15:36:40] 2025-06-05 19:36:29,471 | INFO     | architecture information:
[2025-06-05 15:36:40] 2025-06-05 19:36:29,472 | INFO     | executing command: cat /etc/os-release
[2025-06-05 15:36:40] 2025-06-05 19:36:29,486 | INFO     | cat /etc/os-release:
[2025-06-05 15:36:40] NAME="CentOS Linux"
[2025-06-05 15:36:40] VERSION="7 (Core)"
[2025-06-05 15:36:40] ID="centos"
[2025-06-05 15:36:40] ID_LIKE="rhel fedora"
[2025-06-05 15:36:40] VERSION_ID="7"
[2025-06-05 15:36:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 15:36:40] ANSI_COLOR="0;31"
[2025-06-05 15:36:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 15:36:40] HOME_URL="https://www.centos.org/"
[2025-06-05 15:36:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 15:36:40] 
[2025-06-05 15:36:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 15:36:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 15:36:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 15:36:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 15:36:40] 
[2025-06-05 15:36:40] 2025-06-05 19:36:29,486 | INFO     | **************************************
[2025-06-05 15:36:40] 2025-06-05 19:36:29,989 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-05 15:36:40] 2025-06-05 19:36:30,004 | INFO     | sufficient remaining disk space (129836777472 B)
[2025-06-05 15:36:40] 2025-06-05 19:36:30,005 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 15:36:40] 2025-06-05 19:36:30,005 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 15:36:40] 2025-06-05 19:36:30,005 | INFO     | update_server=False
[2025-06-05 15:36:40] 2025-06-05 19:36:30,005 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 15:36:40] 2025-06-05 19:36:30,005 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 15:36:40] 2025-06-05 19:36:30,005 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 15:36:40] 2025-06-05 19:36:30,005 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 15:36:40] 2025-06-05 19:36:30,006 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 15:36:40] 2025-06-05 19:36:30,006 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 15:36:40] 2025-06-05 19:36:30,080 | INFO     | all data control threads have been joined
[2025-06-05 15:36:40] 2025-06-05 19:36:30,698 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:36:40] 2025-06-05 19:36:30,698 | INFO     | aborting loop
[2025-06-05 15:36:40] 2025-06-05 19:36:30,781 | INFO     | all payload control threads have been joined
[2025-06-05 15:36:40] 2025-06-05 19:36:30,984 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 15:36:40] 2025-06-05 19:36:31,010 | INFO     | [job] retrieve thread has finished
[2025-06-05 15:36:40] 2025-06-05 19:36:31,085 | INFO     | [data] control thread has finished
[2025-06-05 15:36:40] 2025-06-05 19:36:31,203 | INFO     | [payload] failed_post thread has finished
[2025-06-05 15:36:40] 2025-06-05 19:36:31,208 | INFO     | all job control threads have been joined
[2025-06-05 15:36:40] 2025-06-05 19:36:31,353 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 15:36:40] 2025-06-05 19:36:31,703 | INFO     | [job] job monitor thread has finished
[2025-06-05 15:36:40] 2025-06-05 19:36:31,786 | INFO     | [payload] control thread has finished
[2025-06-05 15:36:40] 2025-06-05 19:36:31,853 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 15:36:40] 2025-06-05 19:36:31,897 | INFO     | [job] validate thread has finished
[2025-06-05 15:36:40] 2025-06-05 19:36:31,901 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 15:36:40] 2025-06-05 19:36:32,213 | INFO     | [job] control thread has finished
[2025-06-05 15:36:40] 2025-06-05 19:36:32,260 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 15:36:40] 2025-06-05 19:36:32,349 | INFO     | [data] copytool_in thread has finished
[2025-06-05 15:36:40] 2025-06-05 19:36:32,531 | INFO     | [payload] validate_post thread has finished
[2025-06-05 15:36:40] 2025-06-05 19:36:32,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:36:40] 2025-06-05 19:36:32,989 | INFO     | [data] copytool_out thread has finished
[2025-06-05 15:36:40] 2025-06-05 19:36:33,707 | INFO     | [job] queue monitor thread has finished
[2025-06-05 15:36:40] 2025-06-05 19:36:34,012 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 15:36:40] 2025-06-05 19:36:34,862 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140395001096000)>', '<ExcThread(monitor, started 140394427840256)>']
[2025-06-05 15:36:40] 2025-06-05 19:36:35,031 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 15:36:40] 2025-06-05 19:36:35,031 | INFO     | [monitor] control thread has ended
[2025-06-05 15:36:40] 2025-06-05 19:36:39,888 | INFO     | all workflow threads have been joined
[2025-06-05 15:36:40] 2025-06-05 19:36:39,888 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 15:36:40] 2025-06-05 19:36:39,888 | INFO     | traces error code: 0
[2025-06-05 15:36:40] 2025-06-05 19:36:39,888 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 15:36:40] 2025-06-05 19:36:39,971 [wrapper] ==== pilot stdout END ====
[2025-06-05 15:36:40] 2025-06-05 19:36:39,973 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 15:36:40] 2025-06-05 19:36:39,975 [wrapper] pilotpid: 1693050
[2025-06-05 15:36:40] 2025-06-05 19:36:39,976 [wrapper] Pilot exit status: 0
[2025-06-05 15:36:40] 2025-06-05 19:36:39,985 [wrapper] pandaids: 6668327131
[2025-06-05 15:36:40] 2025-06-05 19:36:40,080 [wrapper] cleanup supervisor_pilot 2416739 1693051
[2025-06-05 15:36:40] 2025-06-05 19:36:40,082 [wrapper] Test setup, not cleaning
[2025-06-05 15:36:40] 2025-06-05 19:36:40,084 [wrapper] apfmon messages muted
[2025-06-05 15:36:40] 2025-06-05 19:36:40,086 [wrapper] ==== wrapper stdout END ====
[2025-06-05 15:36:40] 2025-06-05 19:36:40,087 [wrapper] ==== wrapper stderr END ====
[2025-06-05 15:36:40]  *** Error codes and diagnostics ***
[2025-06-05 15:36:40]     "exeErrorCode": 0,
[2025-06-05 15:36:40]     "exeErrorDiag": "",
[2025-06-05 15:36:40]     "pilotErrorCode": 0,
[2025-06-05 15:36:40]     "pilotErrorDiag": "",
[2025-06-05 15:36:40]  *** Listing of results directory ***
[2025-06-05 15:36:40] total 417556
[2025-06-05 15:36:40] -rw-r--r--. 1 boincer umatlas    495897 May 28 06:54 pilot3.tar.gz
[2025-06-05 15:36:40] -rwx------. 1 boincer umatlas     37140 May 28 06:58 runpilot2-wrapper.sh
[2025-06-05 15:36:40] -rw-r--r--. 1 boincer umatlas      5111 May 28 06:58 queuedata.json
[2025-06-05 15:36:40] -rw-r--r--. 1 boincer umatlas       100 Jun  5 13:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 15:36:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 13:19 run_atlas
[2025-06-05 15:36:40] -rw-r--r--. 1 boincer umatlas       105 Jun  5 13:19 job.xml
[2025-06-05 15:36:40] -rw-r--r--. 2 boincer umatlas 222868551 Jun  5 13:19 EVNT.44871834._003248.pool.root.1
[2025-06-05 15:36:40] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 13:19 start_atlas.sh
[2025-06-05 15:36:40] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 13:19 shared
[2025-06-05 15:36:40] -rw-r--r--. 2 boincer umatlas    508877 Jun  5 13:19 input.tar.gz
[2025-06-05 15:36:40] -rw-r--r--. 1 boincer umatlas         0 Jun  5 13:19 boinc_lockfile
[2025-06-05 15:36:40] -rw-r--r--. 1 boincer umatlas      2558 Jun  5 13:19 pandaJob.out
[2025-06-05 15:36:40] -rw-------. 1 boincer umatlas    983229 Jun  5 13:19 agis_schedconf.cvmfs.json
[2025-06-05 15:36:40] -rw-------. 1 boincer umatlas   1598969 Jun  5 13:19 agis_ddmendpoints.agis.ALL.json
[2025-06-05 15:36:40] drwx------. 4 boincer umatlas      4096 Jun  5 13:19 pilot3
[2025-06-05 15:36:40] -rw-r--r--. 1 boincer umatlas      6935 Jun  5 15:28 init_data.xml
[2025-06-05 15:36:40] -rw-------. 1 boincer umatlas 198700207 Jun  5 15:35 HITS.44871837._083219.pool.root.1
[2025-06-05 15:36:40] -rw-r--r--. 1 boincer umatlas       529 Jun  5 15:35 boinc_task_state.xml
[2025-06-05 15:36:40] -rw-------. 1 boincer umatlas        95 Jun  5 15:36 pilot_heartbeat.json
[2025-06-05 15:36:40] -rw-------. 1 boincer umatlas      1039 Jun  5 15:36 memory_monitor_summary.json
[2025-06-05 15:36:40] -rw-------. 1 boincer umatlas    347049 Jun  5 15:36 log.44871837._083219.job.log.tgz.1
[2025-06-05 15:36:40] -rw-------. 1 boincer umatlas      7699 Jun  5 15:36 heartbeat.json
[2025-06-05 15:36:40] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 15:36 boinc_mmap_file
[2025-06-05 15:36:40] -rw-r--r--. 1 boincer umatlas        27 Jun  5 15:36 wrapper_checkpoint.txt
[2025-06-05 15:36:40] -rw-------. 1 boincer umatlas      4477 Jun  5 15:36 pilotlog.txt
[2025-06-05 15:36:40] -rw-------. 1 boincer umatlas    744149 Jun  5 15:36 log.44871837._083219.job.log.1
[2025-06-05 15:36:40] -rw-------. 1 boincer umatlas       357 Jun  5 15:36 output.list
[2025-06-05 15:36:40] -rw-r--r--. 1 boincer umatlas       620 Jun  5 15:36 runtime_log
[2025-06-05 15:36:40] -rw-------. 1 boincer umatlas   1105920 Jun  5 15:36 result.tar.gz
[2025-06-05 15:36:40] -rw-------. 1 boincer umatlas       654 Jun  5 15:36 Uq9LDmBfTe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxybKDmvr1UOm.diag
[2025-06-05 15:36:40] -rw-r--r--. 1 boincer umatlas      8654 Jun  5 15:36 runtime_log.err
[2025-06-05 15:36:40] -rw-r--r--. 1 boincer umatlas     20856 Jun  5 15:36 stderr.txt
[2025-06-05 15:36:40] HITS file was successfully produced:
[2025-06-05 15:36:40] -rw-------. 1 boincer umatlas 198700207 Jun  5 15:35 shared/HITS.pool.root.1
[2025-06-05 15:36:40]  *** Contents of shared directory: ***
[2025-06-05 15:36:40] total 413296
[2025-06-05 15:36:40] -rw-r--r--. 2 boincer umatlas 222868551 Jun  5 13:19 ATLAS.root_0
[2025-06-05 15:36:40] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 13:19 start_atlas.sh
[2025-06-05 15:36:40] -rw-r--r--. 2 boincer umatlas    508877 Jun  5 13:19 input.tar.gz
[2025-06-05 15:36:40] -rw-------. 1 boincer umatlas 198700207 Jun  5 15:35 HITS.pool.root.1
[2025-06-05 15:36:40] -rw-------. 1 boincer umatlas   1105920 Jun  5 15:36 result.tar.gz
15:36:41 (1686558): run_atlas exited; CPU time 41316.488181
15:36:41 (1686558): called boinc_finish(0)

</stderr_txt>
]]>

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