Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:27:53 (12007): wrapper (7.7.26015): starting
19:27:53 (12007): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 19:27:54] Arguments: --nthreads 8
[2025-06-05 19:27:54] Threads: 8
[2025-06-05 19:27:54] Checking for CVMFS
[2025-06-05 19:27:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 19:27:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 19:27:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 19:27:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 19:27:56] 2.11.2.0 15980 34960 93732 146827 0 16 25058636 25165824 3134 130560 0 18250687 99.841 19145973 1986 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 19:27:56] CVMFS is ok
[2025-06-05 19:27:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 19:27:56] Checking for apptainer binary...
[2025-06-05 19:27:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 19:27:56] Running /usr/bin/apptainer --version
[2025-06-05 19:27:56] apptainer version 1.3.2-1.el7
[2025-06-05 19:27:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 19:28:05] cg-vwn346.simple-grid.lan
[2025-06-05 19:28:05] apptainer works
[2025-06-05 19:28:05] Set ATHENA_PROC_NUMBER=8
[2025-06-05 19:28:05] Set ATHENA_CORE_NUMBER=8
[2025-06-05 19:28:05] Starting ATLAS job with PandaID=6668229960
[2025-06-05 19:28:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 00:53:34]  *** The last 200 lines of the pilot log: ***
[2025-06-06 00:53:34] 2025-06-05 22:42:14,957 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 00:53:34] 2025-06-05 22:42:14,957 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 00:53:34] 2025-06-05 22:42:14,968 | INFO     | fitting pss+swap vs Time
[2025-06-06 00:53:34] 2025-06-05 22:42:14,969 | INFO     | sum of square deviations: 8041713570.0
[2025-06-06 00:53:34] 2025-06-05 22:42:14,972 | INFO     | sum of deviations: 112897788162.5
[2025-06-06 00:53:34] 2025-06-05 22:42:14,972 | INFO     | mean x: 1749154190.5
[2025-06-06 00:53:34] 2025-06-05 22:42:14,973 | INFO     | mean y: 2444923.935810811
[2025-06-06 00:53:34] 2025-06-05 22:42:14,973 | INFO     | -- intersect: -24553968027.566288
[2025-06-06 00:53:34] 2025-06-05 22:42:14,973 | INFO     | intersect: -24553968027.566288
[2025-06-06 00:53:34] 2025-06-05 22:42:14,973 | INFO     | chi2: 7.097308093632758
[2025-06-06 00:53:34] 2025-06-05 22:42:14,974 | INFO     | sum of square deviations: 7641036290.0
[2025-06-06 00:53:34] 2025-06-05 22:42:14,977 | INFO     | sum of deviations: 130271754513.0
[2025-06-06 00:53:34] 2025-06-05 22:42:14,977 | INFO     | mean x: 1749154038.0
[2025-06-06 00:53:34] 2025-06-05 22:42:14,977 | INFO     | mean y: 2451433.910652921
[2025-06-06 00:53:34] 2025-06-05 22:42:14,977 | INFO     | -- intersect: -29818813221.247616
[2025-06-06 00:53:34] 2025-06-05 22:42:14,977 | INFO     | intersect: -29818813221.247616
[2025-06-06 00:53:34] 2025-06-05 22:42:14,978 | INFO     | chi2: 6.373080218783763
[2025-06-06 00:53:34] 2025-06-05 22:42:14,978 | INFO     | current chi2=6.373080218783763 (change=10.204261464973248 %)
[2025-06-06 00:53:34] 2025-06-05 22:42:14,978 | INFO     | right removable region: 290
[2025-06-06 00:53:34] 2025-06-05 22:42:14,979 | INFO     | sum of square deviations: 7641036290.0
[2025-06-06 00:53:34] 2025-06-05 22:42:14,994 | INFO     | sum of deviations: 8400381004.000008
[2025-06-06 00:53:34] 2025-06-05 22:42:14,994 | INFO     | mean x: 1749154343.0
[2025-06-06 00:53:34] 2025-06-05 22:42:14,994 | INFO     | mean y: 2484674.8694158075
[2025-06-06 00:53:34] 2025-06-05 22:42:14,994 | INFO     | -- intersect: -1920495711.3422186
[2025-06-06 00:53:34] 2025-06-05 22:42:14,994 | INFO     | intersect: -1920495711.3422186
[2025-06-06 00:53:34] 2025-06-05 22:42:14,995 | INFO     | chi2: 2.1915219786002473
[2025-06-06 00:53:34] 2025-06-05 22:42:14,995 | INFO     | current chi2=2.1915219786002473 (change=69.1217860393247 %)
[2025-06-06 00:53:34] 2025-06-05 22:42:14,996 | INFO     | sum of square deviations: 7253894147.5
[2025-06-06 00:53:34] 2025-06-05 22:42:14,998 | INFO     | sum of deviations: -39134484059.0
[2025-06-06 00:53:34] 2025-06-05 22:42:15,005 | INFO     | mean x: 1749154495.5
[2025-06-06 00:53:34] 2025-06-05 22:42:15,005 | INFO     | mean y: 2503298.7412587414
[2025-06-06 00:53:34] 2025-06-05 22:42:15,005 | INFO     | -- intersect: 9439125522.469805
[2025-06-06 00:53:34] 2025-06-05 22:42:15,005 | INFO     | intersect: 9439125522.469805
[2025-06-06 00:53:34] 2025-06-05 22:42:15,006 | INFO     | chi2: 0.9321726501146572
[2025-06-06 00:53:34] 2025-06-05 22:42:15,006 | INFO     | current chi2=0.9321726501146572 (change=57.46459952411486 %)
[2025-06-06 00:53:34] 2025-06-05 22:42:15,007 | INFO     | sum of square deviations: 6880054580.0
[2025-06-06 00:53:34] 2025-06-05 22:42:15,009 | INFO     | sum of deviations: -35865827790.0
[2025-06-06 00:53:34] 2025-06-05 22:42:15,009 | INFO     | mean x: 1749154648.0
[2025-06-06 00:53:34] 2025-06-05 22:42:15,010 | INFO     | mean y: 2501943.548042705
[2025-06-06 00:53:34] 2025-06-05 22:42:15,010 | INFO     | -- intersect: 9120871377.071646
[2025-06-06 00:53:34] 2025-06-05 22:42:15,010 | INFO     | intersect: 9120871377.071646
[2025-06-06 00:53:34] 2025-06-05 22:42:15,010 | INFO     | chi2: 0.9165330835784641
[2025-06-06 00:53:34] 2025-06-05 22:42:15,010 | INFO     | current chi2=0.9165330835784641 (change=1.677754280204367 %)
[2025-06-06 00:53:34] 2025-06-05 22:42:15,010 | INFO     | left removable region: 30
[2025-06-06 00:53:34] 2025-06-05 22:42:15,011 | INFO     | sum of square deviations: 5449944045.0
[2025-06-06 00:53:34] 2025-06-05 22:42:15,013 | INFO     | sum of deviations: 10295507166.000002
[2025-06-06 00:53:34] 2025-06-05 22:42:15,014 | INFO     | mean x: 1749154922.5
[2025-06-06 00:53:34] 2025-06-05 22:42:15,014 | INFO     | mean y: 2497391.7384615387
[2025-06-06 00:53:34] 2025-06-05 22:42:15,014 | INFO     | -- intersect: -3301836907.907165
[2025-06-06 00:53:34] 2025-06-05 22:42:15,014 | INFO     | intersect: -3301836907.907165
[2025-06-06 00:53:34] 2025-06-05 22:42:15,014 | INFO     | chi2: 0.0010217373492122615
[2025-06-06 00:53:34] 2025-06-05 22:42:15,015 | INFO     | -- intersect: -3301836907.907165
[2025-06-06 00:53:34] 2025-06-05 22:42:15,015 | INFO     | current memory leak: 1.89 B/s (using 260 data points, chi2=0.00)
[2025-06-06 00:53:34] 2025-06-05 22:42:15,016 | INFO     | ..............................
[2025-06-06 00:53:34] 2025-06-05 22:42:15,016 | INFO     | . Timing measurements:
[2025-06-06 00:53:34] 2025-06-05 22:42:15,016 | INFO     | . get job = 0 s
[2025-06-06 00:53:34] 2025-06-05 22:42:15,016 | INFO     | . initial setup = 5 s
[2025-06-06 00:53:34] 2025-06-05 22:42:15,016 | INFO     | . payload setup = 162 s
[2025-06-06 00:53:34] 2025-06-05 22:42:15,016 | INFO     | . stage-in = 0 s
[2025-06-06 00:53:34] 2025-06-05 22:42:15,016 | INFO     | . payload execution = 18196 s
[2025-06-06 00:53:34] 2025-06-05 22:42:15,017 | INFO     | . stage-out = 3 s
[2025-06-06 00:53:34] 2025-06-05 22:42:15,017 | INFO     | . log creation = 1 s
[2025-06-06 00:53:34] 2025-06-05 22:42:15,017 | INFO     | ..............................
[2025-06-06 00:53:34] 2025-06-05 22:42:15,362 | INFO     | 
[2025-06-06 00:53:34] 2025-06-05 22:42:15,362 | INFO     | job summary report
[2025-06-06 00:53:34] 2025-06-05 22:42:15,362 | INFO     | --------------------------------------------------
[2025-06-06 00:53:34] 2025-06-05 22:42:15,362 | INFO     | PanDA job id: 6668229960
[2025-06-06 00:53:34] 2025-06-05 22:42:15,363 | INFO     | task id: 44871837
[2025-06-06 00:53:34] 2025-06-05 22:42:15,363 | INFO     | errors: (none)
[2025-06-06 00:53:34] 2025-06-05 22:42:15,363 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 00:53:34] 2025-06-05 22:42:15,363 | INFO     | pilot state: finished 
[2025-06-06 00:53:34] 2025-06-05 22:42:15,363 | INFO     | transexitcode: 0
[2025-06-06 00:53:34] 2025-06-05 22:42:15,363 | INFO     | exeerrorcode: 0
[2025-06-06 00:53:34] 2025-06-05 22:42:15,363 | INFO     | exeerrordiag: 
[2025-06-06 00:53:34] 2025-06-05 22:42:15,363 | INFO     | exitcode: 0
[2025-06-06 00:53:34] 2025-06-05 22:42:15,363 | INFO     | exitmsg: OK
[2025-06-06 00:53:34] 2025-06-05 22:42:15,363 | INFO     | cpuconsumptiontime: 68790 s
[2025-06-06 00:53:34] 2025-06-05 22:42:15,363 | INFO     | nevents: 400
[2025-06-06 00:53:34] 2025-06-05 22:42:15,364 | INFO     | neventsw: 0
[2025-06-06 00:53:34] 2025-06-05 22:42:15,364 | INFO     | pid: 25029
[2025-06-06 00:53:34] 2025-06-05 22:42:15,364 | INFO     | pgrp: 25029
[2025-06-06 00:53:34] 2025-06-05 22:42:15,364 | INFO     | corecount: 8
[2025-06-06 00:53:34] 2025-06-05 22:42:15,364 | INFO     | event service: False
[2025-06-06 00:53:34] 2025-06-05 22:42:15,364 | INFO     | sizes: {0: 2396564, 1: 2397250, 2: 2397449, 12: 2397449, 23: 2397477, 34: 2397505, 45: 2397661, 55: 2397689, 66: 2397717, 77: 2397745, 88: 2397801, 91: 2398315, 98
[2025-06-06 00:53:34] 2025-06-05 22:42:15,364 | INFO     | --------------------------------------------------
[2025-06-06 00:53:34] 2025-06-05 22:42:15,364 | INFO     | 
[2025-06-06 00:53:34] 2025-06-05 22:42:15,364 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-06-06 00:53:34] 2025-06-05 22:42:15,935 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 00:53:34] 2025-06-05 22:42:15,936 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 00:53:34] 2025-06-05 22:42:15,936 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 00:53:34] 2025-06-05 22:42:15,936 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 00:53:34] 2025-06-05 22:42:15,936 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 00:53:34] 2025-06-05 22:42:15,936 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 00:53:34] 2025-06-05 22:42:15,936 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 00:53:34] 2025-06-05 22:42:15,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 00:53:34] 2025-06-05 22:42:15,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 00:53:34] 2025-06-05 22:42:15,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 00:53:34] 2025-06-05 22:42:15,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 00:53:34] 2025-06-05 22:42:15,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 00:53:34] 2025-06-05 22:42:15,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 00:53:34] 2025-06-05 22:42:15,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 00:53:34] 2025-06-05 22:42:15,937 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 00:53:34] 2025-06-05 22:42:15,937 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 00:53:34] 2025-06-05 22:42:15,937 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 00:53:34] 2025-06-05 22:42:15,938 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 00:53:34] 2025-06-05 22:42:15,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 00:53:34] 2025-06-05 22:42:15,938 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 00:53:34] 2025-06-05 22:42:15,938 | INFO     | job 6668229960 has completed (purged errors)
[2025-06-06 00:53:34] 2025-06-05 22:42:15,938 | INFO     | overall cleanup function is called
[2025-06-06 00:53:34] 2025-06-05 22:42:16,788 | INFO     | PID=18376 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-06 00:53:34] 2025-06-05 22:42:16,789 | INFO     | .. there are 9 such processes running
[2025-06-06 00:53:34] 2025-06-05 22:42:16,948 | INFO     | --- collectZombieJob: --- 10, [25029]
[2025-06-06 00:53:34] 2025-06-05 22:42:16,948 | INFO     | zombie collector waiting for pid 25029
[2025-06-06 00:53:34] 2025-06-05 22:42:16,948 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 00:53:34] 2025-06-05 22:42:16,948 | INFO     | collected zombie processes
[2025-06-06 00:53:34] 2025-06-05 22:42:16,948 | INFO     | will attempt to kill all subprocesses of pid=25029
[2025-06-06 00:53:34] 2025-06-05 22:42:17,107 | INFO     | process IDs to be killed: [25029] (in reverse order)
[2025-06-06 00:53:34] 2025-06-05 22:42:17,754 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 00:53:34] 2025-06-05 22:42:17,754 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 00:53:34] 2025-06-05 22:42:17,759 | INFO     | did not find any defunct processes belonging to 25029
[2025-06-06 00:53:34] 2025-06-05 22:42:17,764 | INFO     | did not find any defunct processes belonging to 25029
[2025-06-06 00:53:34] 2025-06-05 22:42:17,764 | INFO     | ready for new job
[2025-06-06 00:53:34] 2025-06-05 22:42:17,765 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 00:53:34] 2025-06-05 22:42:17,768 | INFO     | **************************************
[2025-06-06 00:53:34] 2025-06-05 22:42:17,769 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 00:53:34] 2025-06-05 22:42:17,769 | INFO     | **************************************
[2025-06-06 00:53:34] 2025-06-05 22:42:17,769 | INFO     | 
[2025-06-06 00:53:34] 2025-06-05 22:42:17,770 | INFO     | pilot is running in a VM
[2025-06-06 00:53:34] 2025-06-05 22:42:17,770 | INFO     | architecture information:
[2025-06-06 00:53:34] 2025-06-05 22:42:17,781 | INFO     | executing command: cat /etc/os-release
[2025-06-06 00:53:34] 2025-06-05 22:42:18,000 | INFO     | cat /etc/os-release:
[2025-06-06 00:53:34] NAME="CentOS Linux"
[2025-06-06 00:53:34] VERSION="7 (Core)"
[2025-06-06 00:53:34] ID="centos"
[2025-06-06 00:53:34] ID_LIKE="rhel fedora"
[2025-06-06 00:53:34] VERSION_ID="7"
[2025-06-06 00:53:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 00:53:34] ANSI_COLOR="0;31"
[2025-06-06 00:53:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 00:53:34] HOME_URL="https://www.centos.org/"
[2025-06-06 00:53:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 00:53:34] 
[2025-06-06 00:53:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 00:53:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 00:53:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 00:53:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 00:53:34] 
[2025-06-06 00:53:34] 2025-06-05 22:42:18,000 | INFO     | **************************************
[2025-06-06 00:53:34] 2025-06-05 22:42:18,504 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-06-06 00:53:34] 2025-06-05 22:42:18,745 | INFO     | sufficient remaining disk space (496905486336 B)
[2025-06-06 00:53:34] 2025-06-05 22:42:18,746 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 00:53:34] 2025-06-05 22:42:18,746 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 00:53:34] 2025-06-05 22:42:18,746 | INFO     | update_server=False
[2025-06-06 00:53:34] 2025-06-05 22:42:18,746 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 00:53:34] 2025-06-05 22:42:18,749 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 00:53:34] 2025-06-05 22:42:18,798 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 00:53:34] 2025-06-05 22:42:18,798 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 00:53:34] 2025-06-05 22:42:18,799 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 00:53:34] 2025-06-05 22:42:18,902 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 00:53:34] 2025-06-05 22:42:18,902 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 00:53:34] 2025-06-05 22:42:18,902 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 00:53:34] 2025-06-05 22:42:18,902 | INFO     | will abort loop
[2025-06-06 00:53:34] 2025-06-05 22:42:19,057 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 00:53:34] 2025-06-05 22:42:19,752 | INFO     | [job] retrieve thread has finished
[2025-06-06 00:53:34] 2025-06-05 22:42:19,779 | INFO     | all data control threads have been joined
[2025-06-06 00:53:34] 2025-06-05 22:42:19,909 | INFO     | [job] job monitor thread has finished
[2025-06-06 00:53:34] 2025-06-05 22:42:19,949 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 00:53:34] 2025-06-05 22:42:19,950 | INFO     | all job control threads have been joined
[2025-06-06 00:53:34] 2025-06-05 22:42:20,012 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 00:53:34] 2025-06-05 22:42:20,209 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 00:53:34] 2025-06-05 22:42:20,213 | INFO     | all payload control threads have been joined
[2025-06-06 00:53:34] 2025-06-05 22:42:20,433 | INFO     | [data] copytool_in thread has finished
[2025-06-06 00:53:34] 2025-06-05 22:42:20,529 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 00:53:34] 2025-06-05 22:42:20,693 | INFO     | [payload] failed_post thread has finished
[2025-06-06 00:53:34] 2025-06-05 22:42:20,756 | INFO     | [data] copytool_out thread has finished
[2025-06-06 00:53:34] 2025-06-05 22:42:20,785 | INFO     | [data] control thread has finished
[2025-06-06 00:53:34] 2025-06-05 22:42:20,956 | INFO     | [job] control thread has finished
[2025-06-06 00:53:34] 2025-06-05 22:42:20,957 | INFO     | [job] validate thread has finished
[2025-06-06 00:53:34] 2025-06-05 22:42:21,134 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 00:53:34] 2025-06-05 22:42:21,179 | INFO     | [payload] validate_post thread has finished
[2025-06-06 00:53:34] 2025-06-05 22:42:21,215 | INFO     | [job] queue monitor thread has finished
[2025-06-06 00:53:34] 2025-06-05 22:42:21,219 | INFO     | [payload] control thread has finished
[2025-06-06 00:53:34] 2025-06-05 22:42:23,068 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 00:53:34] 2025-06-05 22:42:24,006 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140362340407104)>', '<ExcThread(monitor, started 140361569642240)>']
[2025-06-06 00:53:34] 2025-06-05 22:42:24,837 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 00:53:34] 2025-06-05 22:42:24,837 | INFO     | [monitor] control thread has ended
[2025-06-06 00:53:34] 2025-06-05 22:42:29,032 | INFO     | all workflow threads have been joined
[2025-06-06 00:53:34] 2025-06-05 22:42:29,032 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 00:53:34] 2025-06-05 22:42:29,032 | INFO     | traces error code: 0
[2025-06-06 00:53:34] 2025-06-05 22:42:29,033 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 00:53:34] 2025-06-05 22:42:29,531 [wrapper] ==== pilot stdout END ====
[2025-06-06 00:53:34] 2025-06-05 22:42:29,693 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 00:53:34] 2025-06-05 22:42:29,852 [wrapper] pilotpid: 18376
[2025-06-06 00:53:34] 2025-06-05 22:42:29,970 [wrapper] Pilot exit status: 0
[2025-06-06 00:53:34] 2025-06-05 22:42:30,249 [wrapper] pandaids: 6668229960
[2025-06-06 00:53:34] 2025-06-05 22:42:30,975 [wrapper] cleanup supervisor_pilot 20161 18377
[2025-06-06 00:53:34] 2025-06-05 22:42:31,051 [wrapper] Test setup, not cleaning
[2025-06-06 00:53:34] 2025-06-05 22:42:31,134 [wrapper] apfmon messages muted
[2025-06-06 00:53:34] 2025-06-05 22:42:31,179 [wrapper] ==== wrapper stdout END ====
[2025-06-06 00:53:34] 2025-06-05 22:42:31,249 [wrapper] ==== wrapper stderr END ====
[2025-06-06 00:53:34]  *** Error codes and diagnostics ***
[2025-06-06 00:53:34]     "exeErrorCode": 0,
[2025-06-06 00:53:34]     "exeErrorDiag": "",
[2025-06-06 00:53:34]     "pilotErrorCode": 0,
[2025-06-06 00:53:34]     "pilotErrorDiag": "",
[2025-06-06 00:53:34]  *** Listing of results directory ***
[2025-06-06 00:53:34] total 416100
[2025-06-06 00:53:34] -rw-r--r--. 1 boinc boinc    495897 May 28 09:31 pilot3.tar.gz
[2025-06-06 00:53:34] -rw-r--r--. 1 boinc boinc      5111 May 28 09:37 queuedata.json
[2025-06-06 00:53:34] -rwx------. 1 boinc boinc     37140 May 28 09:38 runpilot2-wrapper.sh
[2025-06-06 00:53:34] -rw-r--r--. 1 boinc boinc       100 Jun  5 19:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 00:53:34] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 19:27 run_atlas
[2025-06-06 00:53:34] -rw-r--r--. 1 boinc boinc       105 Jun  5 19:27 job.xml
[2025-06-06 00:53:34] -rw-r--r--. 1 boinc boinc      6392 Jun  5 19:27 init_data.xml
[2025-06-06 00:53:34] -rw-r--r--. 2 boinc boinc 222498794 Jun  5 19:27 EVNT.44871834._003151.pool.root.1
[2025-06-06 00:53:34] drwxrwx--x. 2 boinc boinc        68 Jun  5 19:27 shared
[2025-06-06 00:53:34] -rw-r--r--. 2 boinc boinc    508886 Jun  5 19:27 input.tar.gz
[2025-06-06 00:53:34] -rw-r--r--. 2 boinc boinc     15093 Jun  5 19:27 start_atlas.sh
[2025-06-06 00:53:34] -rw-r--r--. 1 boinc boinc         0 Jun  5 19:27 boinc_lockfile
[2025-06-06 00:53:34] -rw-r--r--. 1 boinc boinc      2559 Jun  5 19:28 pandaJob.out
[2025-06-06 00:53:34] -rw-------. 1 boinc boinc    983229 Jun  5 19:31 agis_schedconf.cvmfs.json
[2025-06-06 00:53:34] drwx------. 4 boinc boinc      4096 Jun  5 19:31 pilot3
[2025-06-06 00:53:34] -rw-------. 1 boinc boinc 195754551 Jun  6 00:39 HITS.44871837._080718.pool.root.1
[2025-06-06 00:53:34] -rw-r--r--. 1 boinc boinc       531 Jun  6 00:39 boinc_task_state.xml
[2025-06-06 00:53:34] -rw-------. 1 boinc boinc      1028 Jun  6 00:40 memory_monitor_summary.json
[2025-06-06 00:53:34] -rw-------. 1 boinc boinc   1598969 Jun  6 00:40 agis_ddmendpoints.agis.ALL.json
[2025-06-06 00:53:34] -rw-------. 1 boinc boinc    426074 Jun  6 00:40 log.44871837._080718.job.log.tgz.1
[2025-06-06 00:53:34] -rw-------. 1 boinc boinc        95 Jun  6 00:41 pilot_heartbeat.json
[2025-06-06 00:53:34] -rw-------. 1 boinc boinc      7684 Jun  6 00:42 heartbeat.json
[2025-06-06 00:53:34] -rw-------. 1 boinc boinc      4603 Jun  6 00:42 pilotlog.txt
[2025-06-06 00:53:34] -rw-------. 1 boinc boinc   1577885 Jun  6 00:42 log.44871837._080718.job.log.1
[2025-06-06 00:53:34] -rw-------. 1 boinc boinc       357 Jun  6 00:42 output.list
[2025-06-06 00:53:34] -rw-r--r--. 1 boinc boinc       620 Jun  6 00:42 runtime_log
[2025-06-06 00:53:34] -rw-------. 1 boinc boinc   2027520 Jun  6 00:42 result.tar.gz
[2025-06-06 00:53:34] -rw-------. 1 boinc boinc       657 Jun  6 00:42 YpbMDmrXQe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlXbKDmgB30Mo.diag
[2025-06-06 00:53:34] -rw-r--r--. 1 boinc boinc      8673 Jun  6 00:42 runtime_log.err
[2025-06-06 00:53:34] -rw-r--r--. 1 boinc boinc      8192 Jun  6 00:53 boinc_mmap_file
[2025-06-06 00:53:34] -rw-r--r--. 1 boinc boinc        28 Jun  6 00:53 wrapper_checkpoint.txt
[2025-06-06 00:53:34] -rw-r--r--. 1 boinc boinc     20611 Jun  6 00:53 stderr.txt
[2025-06-06 00:53:34] HITS file was successfully produced:
[2025-06-06 00:53:34] -rw-------. 1 boinc boinc 195754551 Jun  6 00:39 shared/HITS.pool.root.1
[2025-06-06 00:53:34]  *** Contents of shared directory: ***
[2025-06-06 00:53:34] total 410948
[2025-06-06 00:53:34] -rw-r--r--. 2 boinc boinc 222498794 Jun  5 19:27 ATLAS.root_0
[2025-06-06 00:53:34] -rw-r--r--. 2 boinc boinc    508886 Jun  5 19:27 input.tar.gz
[2025-06-06 00:53:34] -rw-r--r--. 2 boinc boinc     15093 Jun  5 19:27 start_atlas.sh
[2025-06-06 00:53:34] -rw-------. 1 boinc boinc 195754551 Jun  6 00:39 HITS.pool.root.1
[2025-06-06 00:53:34] -rw-------. 1 boinc boinc   2027520 Jun  6 00:42 result.tar.gz
00:53:36 (12007): run_atlas exited; CPU time 69021.506852
00:53:36 (12007): called boinc_finish(0)

</stderr_txt>
]]>

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