Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:08:16 (26158): wrapper (7.7.26015): starting
19:08:16 (26158): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 19:08:16] Arguments: --nthreads 8
[2025-06-05 19:08:16] Threads: 8
[2025-06-05 19:08:16] Checking for CVMFS
[2025-06-05 19:08:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 19:08:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 19:08:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 19:08:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 19:08:18] 2.11.2.0 9832 34916 89580 146826 0 16 15703897 25165825 2745 130560 0 18818638 99.835 19003871 2117 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 19:08:18] CVMFS is ok
[2025-06-05 19:08:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 19:08:18] Checking for apptainer binary...
[2025-06-05 19:08:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 19:08:18] Running /usr/bin/apptainer --version
[2025-06-05 19:08:18] apptainer version 1.3.2-1.el7
[2025-06-05 19:08:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 19:38:38] cg-vwn287.simple-grid.lan
[2025-06-05 19:38:38] apptainer works
[2025-06-05 19:38:38] Set ATHENA_PROC_NUMBER=8
[2025-06-05 19:38:38] Set ATHENA_CORE_NUMBER=8
[2025-06-05 19:38:38] Starting ATLAS job with PandaID=6668439104
[2025-06-05 19:38:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 00:57:25]  *** The last 200 lines of the pilot log: ***
[2025-06-06 00:57:25] 2025-06-05 22:56:33,480 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6668439104/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 00:57:25] 2025-06-05 22:56:33,481 | INFO     | extracted standard info from prmon json
[2025-06-06 00:57:25] 2025-06-05 22:56:33,481 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 00:57:25] 2025-06-05 22:56:33,481 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 00:57:25] 2025-06-05 22:56:33,481 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 00:57:25] 2025-06-05 22:56:33,482 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 00:57:25] 2025-06-05 22:56:33,488 | INFO     | fitting pss+swap vs Time
[2025-06-06 00:57:25] 2025-06-05 22:56:33,489 | INFO     | sum of square deviations: 8372156975.0
[2025-06-06 00:57:25] 2025-06-05 22:56:33,492 | INFO     | sum of deviations: 182827064512.0
[2025-06-06 00:57:25] 2025-06-05 22:56:33,492 | INFO     | mean x: 1749154957.5
[2025-06-06 00:57:25] 2025-06-05 22:56:33,493 | INFO     | mean y: 2424835.8133333335
[2025-06-06 00:57:25] 2025-06-05 22:56:33,493 | INFO     | -- intersect: -38194764635.34289
[2025-06-06 00:57:25] 2025-06-05 22:56:33,493 | INFO     | intersect: -38194764635.34289
[2025-06-06 00:57:25] 2025-06-05 22:56:33,493 | INFO     | chi2: 8.208016373707977
[2025-06-06 00:57:25] 2025-06-05 22:56:33,494 | INFO     | sum of square deviations: 7960484140.0
[2025-06-06 00:57:25] 2025-06-05 22:56:33,497 | INFO     | sum of deviations: 199010447837.99997
[2025-06-06 00:57:25] 2025-06-05 22:56:33,497 | INFO     | mean x: 1749154805.0
[2025-06-06 00:57:25] 2025-06-05 22:56:33,497 | INFO     | mean y: 2430731.6101694917
[2025-06-06 00:57:25] 2025-06-05 22:56:33,497 | INFO     | -- intersect: -43726075595.272545
[2025-06-06 00:57:25] 2025-06-05 22:56:33,497 | INFO     | intersect: -43726075595.272545
[2025-06-06 00:57:25] 2025-06-05 22:56:33,498 | INFO     | chi2: 7.491101914782796
[2025-06-06 00:57:25] 2025-06-05 22:56:33,498 | INFO     | current chi2=7.491101914782796 (change=8.734320526231052 %)
[2025-06-06 00:57:25] 2025-06-05 22:56:33,498 | INFO     | right removable region: 294
[2025-06-06 00:57:25] 2025-06-05 22:56:33,498 | INFO     | sum of square deviations: 7960484140.0
[2025-06-06 00:57:25] 2025-06-05 22:56:33,501 | INFO     | sum of deviations: 76547750455.0
[2025-06-06 00:57:25] 2025-06-05 22:56:33,501 | INFO     | mean x: 1749155110.0
[2025-06-06 00:57:25] 2025-06-05 22:56:33,501 | INFO     | mean y: 2464191.084745763
[2025-06-06 00:57:25] 2025-06-05 22:56:33,502 | INFO     | -- intersect: -16817353110.550888
[2025-06-06 00:57:25] 2025-06-05 22:56:33,502 | INFO     | intersect: -16817353110.550888
[2025-06-06 00:57:25] 2025-06-05 22:56:33,502 | INFO     | chi2: 3.1347464683525845
[2025-06-06 00:57:25] 2025-06-05 22:56:33,502 | INFO     | current chi2=3.1347464683525845 (change=61.808720577192744 %)
[2025-06-06 00:57:25] 2025-06-05 22:56:33,503 | INFO     | sum of square deviations: 7562532492.5
[2025-06-06 00:57:25] 2025-06-05 22:56:33,505 | INFO     | sum of deviations: 4320351291.000004
[2025-06-06 00:57:25] 2025-06-05 22:56:33,506 | INFO     | mean x: 1749155262.5
[2025-06-06 00:57:25] 2025-06-05 22:56:33,506 | INFO     | mean y: 2491811.1379310344
[2025-06-06 00:57:25] 2025-06-05 22:56:33,507 | INFO     | -- intersect: -996772020.6533115
[2025-06-06 00:57:25] 2025-06-05 22:56:33,507 | INFO     | intersect: -996772020.6533115
[2025-06-06 00:57:25] 2025-06-05 22:56:33,507 | INFO     | chi2: 0.8694995157324916
[2025-06-06 00:57:25] 2025-06-05 22:56:33,508 | INFO     | current chi2=0.8694995157324916 (change=72.26252507146317 %)
[2025-06-06 00:57:25] 2025-06-05 22:56:33,508 | INFO     | sum of square deviations: 7178069470.0
[2025-06-06 00:57:25] 2025-06-05 22:56:33,511 | INFO     | sum of deviations: -4780570426.999996
[2025-06-06 00:57:25] 2025-06-05 22:56:33,511 | INFO     | mean x: 1749155415.0
[2025-06-06 00:57:25] 2025-06-05 22:56:33,512 | INFO     | mean y: 2495395.1894736844
[2025-06-06 00:57:25] 2025-06-05 22:56:33,512 | INFO     | -- intersect: 1167427092.2319524
[2025-06-06 00:57:25] 2025-06-05 22:56:33,512 | INFO     | intersect: 1167427092.2319524
[2025-06-06 00:57:25] 2025-06-05 22:56:33,512 | INFO     | chi2: 0.8146137127373636
[2025-06-06 00:57:25] 2025-06-05 22:56:33,512 | INFO     | current chi2=0.8146137127373636 (change=6.312344285653872 %)
[2025-06-06 00:57:25] 2025-06-05 22:56:33,513 | INFO     | left removable region: 30
[2025-06-06 00:57:25] 2025-06-05 22:56:33,513 | INFO     | sum of square deviations: 5705372090.0
[2025-06-06 00:57:25] 2025-06-05 22:56:33,515 | INFO     | sum of deviations: 13225680931.500004
[2025-06-06 00:57:25] 2025-06-05 22:56:33,516 | INFO     | mean x: 1749155689.5
[2025-06-06 00:57:25] 2025-06-05 22:56:33,516 | INFO     | mean y: 2503090.428030303
[2025-06-06 00:57:25] 2025-06-05 22:56:33,516 | INFO     | -- intersect: -4052232461.244795
[2025-06-06 00:57:25] 2025-06-05 22:56:33,516 | INFO     | intersect: -4052232461.244795
[2025-06-06 00:57:25] 2025-06-05 22:56:33,516 | INFO     | chi2: 0.0016058076565264906
[2025-06-06 00:57:25] 2025-06-05 22:56:33,517 | INFO     | -- intersect: -4052232461.244795
[2025-06-06 00:57:25] 2025-06-05 22:56:33,517 | INFO     | current memory leak: 2.32 B/s (using 264 data points, chi2=0.00)
[2025-06-06 00:57:25] 2025-06-05 22:56:33,519 | INFO     | ..............................
[2025-06-06 00:57:25] 2025-06-05 22:56:33,519 | INFO     | . Timing measurements:
[2025-06-06 00:57:25] 2025-06-05 22:56:33,519 | INFO     | . get job = 0 s
[2025-06-06 00:57:25] 2025-06-05 22:56:33,519 | INFO     | . initial setup = 6 s
[2025-06-06 00:57:25] 2025-06-05 22:56:33,519 | INFO     | . payload setup = 182 s
[2025-06-06 00:57:25] 2025-06-05 22:56:33,519 | INFO     | . stage-in = 0 s
[2025-06-06 00:57:25] 2025-06-05 22:56:33,519 | INFO     | . payload execution = 18397 s
[2025-06-06 00:57:25] 2025-06-05 22:56:33,519 | INFO     | . stage-out = 3 s
[2025-06-06 00:57:25] 2025-06-05 22:56:33,519 | INFO     | . log creation = 1 s
[2025-06-06 00:57:25] 2025-06-05 22:56:33,520 | INFO     | ..............................
[2025-06-06 00:57:25] 2025-06-05 22:56:33,928 | INFO     | 
[2025-06-06 00:57:25] 2025-06-05 22:56:33,929 | INFO     | job summary report
[2025-06-06 00:57:25] 2025-06-05 22:56:33,929 | INFO     | --------------------------------------------------
[2025-06-06 00:57:25] 2025-06-05 22:56:33,929 | INFO     | PanDA job id: 6668439104
[2025-06-06 00:57:25] 2025-06-05 22:56:33,929 | INFO     | task id: 44871837
[2025-06-06 00:57:25] 2025-06-05 22:56:33,929 | INFO     | errors: (none)
[2025-06-06 00:57:25] 2025-06-05 22:56:33,929 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 00:57:25] 2025-06-05 22:56:33,929 | INFO     | pilot state: finished 
[2025-06-06 00:57:25] 2025-06-05 22:56:33,929 | INFO     | transexitcode: 0
[2025-06-06 00:57:25] 2025-06-05 22:56:33,929 | INFO     | exeerrorcode: 0
[2025-06-06 00:57:25] 2025-06-05 22:56:33,929 | INFO     | exeerrordiag: 
[2025-06-06 00:57:25] 2025-06-05 22:56:33,929 | INFO     | exitcode: 0
[2025-06-06 00:57:25] 2025-06-05 22:56:33,930 | INFO     | exitmsg: OK
[2025-06-06 00:57:25] 2025-06-05 22:56:33,930 | INFO     | cpuconsumptiontime: 69078 s
[2025-06-06 00:57:25] 2025-06-05 22:56:33,930 | INFO     | nevents: 400
[2025-06-06 00:57:25] 2025-06-05 22:56:33,930 | INFO     | neventsw: 0
[2025-06-06 00:57:25] 2025-06-05 22:56:33,930 | INFO     | pid: 21505
[2025-06-06 00:57:25] 2025-06-05 22:56:33,930 | INFO     | pgrp: 21505
[2025-06-06 00:57:25] 2025-06-05 22:56:33,930 | INFO     | corecount: 8
[2025-06-06 00:57:25] 2025-06-05 22:56:33,930 | INFO     | event service: False
[2025-06-06 00:57:25] 2025-06-05 22:56:33,930 | INFO     | sizes: {0: 2397115, 1: 2397370, 2: 2397370, 12: 2397398, 23: 2397426, 34: 2397454, 44: 2397610, 55: 2397638, 66: 2397666, 77: 2397694, 87: 2398264, 18584: 2429813,
[2025-06-06 00:57:25] 2025-06-05 22:56:33,930 | INFO     | --------------------------------------------------
[2025-06-06 00:57:25] 2025-06-05 22:56:33,930 | INFO     | 
[2025-06-06 00:57:25] 2025-06-05 22:56:33,930 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-06-06 00:57:25] 2025-06-05 22:56:34,233 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 00:57:25] 2025-06-05 22:56:34,233 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 00:57:25] 2025-06-05 22:56:34,233 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 00:57:25] 2025-06-05 22:56:34,233 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 00:57:25] 2025-06-05 22:56:34,233 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 00:57:25] 2025-06-05 22:56:34,234 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 00:57:25] 2025-06-05 22:56:34,234 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 00:57:25] 2025-06-05 22:56:34,234 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 00:57:25] 2025-06-05 22:56:34,234 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 00:57:25] 2025-06-05 22:56:34,234 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 00:57:25] 2025-06-05 22:56:34,234 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 00:57:25] 2025-06-05 22:56:34,234 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 00:57:25] 2025-06-05 22:56:34,234 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 00:57:25] 2025-06-05 22:56:34,234 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 00:57:25] 2025-06-05 22:56:34,234 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 00:57:25] 2025-06-05 22:56:34,234 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 00:57:25] 2025-06-05 22:56:34,234 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 00:57:25] 2025-06-05 22:56:34,235 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 00:57:25] 2025-06-05 22:56:34,235 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 00:57:25] 2025-06-05 22:56:34,235 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 00:57:25] 2025-06-05 22:56:34,235 | INFO     | job 6668439104 has completed (purged errors)
[2025-06-06 00:57:25] 2025-06-05 22:56:34,235 | INFO     | overall cleanup function is called
[2025-06-06 00:57:25] 2025-06-05 22:56:35,244 | INFO     | --- collectZombieJob: --- 10, [21505]
[2025-06-06 00:57:25] 2025-06-05 22:56:35,244 | INFO     | zombie collector waiting for pid 21505
[2025-06-06 00:57:25] 2025-06-05 22:56:35,245 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 00:57:25] 2025-06-05 22:56:35,245 | INFO     | collected zombie processes
[2025-06-06 00:57:25] 2025-06-05 22:56:35,245 | INFO     | will attempt to kill all subprocesses of pid=21505
[2025-06-06 00:57:25] 2025-06-05 22:56:35,370 | INFO     | process IDs to be killed: [21505] (in reverse order)
[2025-06-06 00:57:25] 2025-06-05 22:56:36,270 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 00:57:25] 2025-06-05 22:56:36,271 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 00:57:25] 2025-06-05 22:56:36,275 | INFO     | did not find any defunct processes belonging to 21505
[2025-06-06 00:57:25] 2025-06-05 22:56:36,278 | INFO     | did not find any defunct processes belonging to 21505
[2025-06-06 00:57:25] 2025-06-05 22:56:36,279 | INFO     | ready for new job
[2025-06-06 00:57:25] 2025-06-05 22:56:36,280 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 00:57:25] 2025-06-05 22:56:36,282 | INFO     | **************************************
[2025-06-06 00:57:25] 2025-06-05 22:56:36,282 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 00:57:25] 2025-06-05 22:56:36,282 | INFO     | **************************************
[2025-06-06 00:57:25] 2025-06-05 22:56:36,282 | INFO     | 
[2025-06-06 00:57:25] 2025-06-05 22:56:36,283 | INFO     | pilot is running in a VM
[2025-06-06 00:57:25] 2025-06-05 22:56:36,283 | INFO     | architecture information:
[2025-06-06 00:57:25] 2025-06-05 22:56:36,284 | INFO     | executing command: cat /etc/os-release
[2025-06-06 00:57:25] 2025-06-05 22:56:36,509 | INFO     | cat /etc/os-release:
[2025-06-06 00:57:25] NAME="CentOS Linux"
[2025-06-06 00:57:25] VERSION="7 (Core)"
[2025-06-06 00:57:25] ID="centos"
[2025-06-06 00:57:25] ID_LIKE="rhel fedora"
[2025-06-06 00:57:25] VERSION_ID="7"
[2025-06-06 00:57:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 00:57:25] ANSI_COLOR="0;31"
[2025-06-06 00:57:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 00:57:25] HOME_URL="https://www.centos.org/"
[2025-06-06 00:57:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 00:57:25] 
[2025-06-06 00:57:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 00:57:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 00:57:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 00:57:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 00:57:25] 
[2025-06-06 00:57:25] 2025-06-05 22:56:36,510 | INFO     | **************************************
[2025-06-06 00:57:25] 2025-06-05 22:56:37,013 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-06-06 00:57:25] 2025-06-05 22:56:37,183 | INFO     | sufficient remaining disk space (497201184768 B)
[2025-06-06 00:57:25] 2025-06-05 22:56:37,183 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 00:57:25] 2025-06-05 22:56:37,184 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 00:57:25] 2025-06-05 22:56:37,184 | INFO     | update_server=False
[2025-06-06 00:57:25] 2025-06-05 22:56:37,184 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 00:57:25] 2025-06-05 22:56:37,184 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 00:57:25] 2025-06-05 22:56:37,184 | INFO     | aborting loop
[2025-06-06 00:57:25] 2025-06-05 22:56:37,185 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 00:57:25] 2025-06-05 22:56:37,667 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 00:57:25] 2025-06-05 22:56:37,668 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 00:57:25] 2025-06-05 22:56:37,668 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 00:57:25] 2025-06-05 22:56:37,773 | INFO     | all data control threads have been joined
[2025-06-06 00:57:25] 2025-06-05 22:56:37,884 | INFO     | all payload control threads have been joined
[2025-06-06 00:57:25] 2025-06-05 22:56:38,189 | INFO     | [job] job monitor thread has finished
[2025-06-06 00:57:25] 2025-06-05 22:56:38,194 | INFO     | all job control threads have been joined
[2025-06-06 00:57:25] 2025-06-05 22:56:38,190 | INFO     | [job] retrieve thread has finished
[2025-06-06 00:57:25] 2025-06-05 22:56:38,421 | INFO     | [data] copytool_in thread has finished
[2025-06-06 00:57:25] 2025-06-05 22:56:38,433 | INFO     | [job] validate thread has finished
[2025-06-06 00:57:25] 2025-06-05 22:56:38,657 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 00:57:25] 2025-06-05 22:56:38,671 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 00:57:25] 2025-06-05 22:56:38,779 | INFO     | [data] control thread has finished
[2025-06-06 00:57:25] 2025-06-05 22:56:38,836 | INFO     | [payload] failed_post thread has finished
[2025-06-06 00:57:25] 2025-06-05 22:56:38,890 | INFO     | [payload] control thread has finished
[2025-06-06 00:57:25] 2025-06-05 22:56:39,001 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 00:57:25] 2025-06-05 22:56:39,051 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 00:57:25] 2025-06-05 22:56:39,162 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 00:57:25] 2025-06-05 22:56:39,192 | INFO     | [data] copytool_out thread has finished
[2025-06-06 00:57:25] 2025-06-05 22:56:39,200 | INFO     | [job] control thread has finished
[2025-06-06 00:57:25] 2025-06-05 22:56:39,612 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 00:57:25] 2025-06-05 22:56:39,663 | INFO     | [job] queue monitor thread has finished
[2025-06-06 00:57:25] 2025-06-05 22:56:39,703 | INFO     | [payload] validate_post thread has finished
[2025-06-06 00:57:25] 2025-06-05 22:56:43,010 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 00:57:25] 2025-06-05 22:56:43,380 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139912552818496)>', '<ExcThread(monitor, started 139911957038848)>']
[2025-06-06 00:57:25] 2025-06-05 22:56:43,704 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 00:57:25] 2025-06-05 22:56:43,704 | INFO     | [monitor] control thread has ended
[2025-06-06 00:57:25] 2025-06-05 22:56:48,406 | INFO     | all workflow threads have been joined
[2025-06-06 00:57:25] 2025-06-05 22:56:48,406 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 00:57:25] 2025-06-05 22:56:48,407 | INFO     | traces error code: 0
[2025-06-06 00:57:25] 2025-06-05 22:56:48,407 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 00:57:25] 2025-06-05 22:56:48,768 [wrapper] ==== pilot stdout END ====
[2025-06-06 00:57:25] 2025-06-05 22:56:48,774 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 00:57:25] 2025-06-05 22:56:48,837 [wrapper] pilotpid: 14732
[2025-06-06 00:57:25] 2025-06-05 22:56:48,901 [wrapper] Pilot exit status: 0
[2025-06-06 00:57:25] 2025-06-05 22:56:49,283 [wrapper] pandaids: 6668439104
[2025-06-06 00:57:25] 2025-06-05 22:56:50,016 [wrapper] cleanup supervisor_pilot 18276 14733
[2025-06-06 00:57:25] 2025-06-05 22:56:50,122 [wrapper] Test setup, not cleaning
[2025-06-06 00:57:25] 2025-06-05 22:56:50,203 [wrapper] apfmon messages muted
[2025-06-06 00:57:25] 2025-06-05 22:56:50,282 [wrapper] ==== wrapper stdout END ====
[2025-06-06 00:57:25] 2025-06-05 22:56:50,337 [wrapper] ==== wrapper stderr END ====
[2025-06-06 00:57:25]  *** Error codes and diagnostics ***
[2025-06-06 00:57:25]     "exeErrorCode": 0,
[2025-06-06 00:57:25]     "exeErrorDiag": "",
[2025-06-06 00:57:25]     "pilotErrorCode": 0,
[2025-06-06 00:57:25]     "pilotErrorDiag": "",
[2025-06-06 00:57:25]  *** Listing of results directory ***
[2025-06-06 00:57:25] total 416752
[2025-06-06 00:57:25] -rw-r--r--. 1 boinc boinc      5111 May 28 13:04 queuedata.json
[2025-06-06 00:57:25] -rwx------. 1 boinc boinc     37140 May 28 13:04 runpilot2-wrapper.sh
[2025-06-06 00:57:25] -rw-r--r--. 1 boinc boinc    495897 May 28 13:04 pilot3.tar.gz
[2025-06-06 00:57:25] -rw-r--r--. 1 boinc boinc       100 Jun  5 19:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 00:57:25] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 19:08 run_atlas
[2025-06-06 00:57:25] -rw-r--r--. 1 boinc boinc       105 Jun  5 19:08 job.xml
[2025-06-06 00:57:25] -rw-r--r--. 2 boinc boinc 223542361 Jun  5 19:08 EVNT.44871834._001739.pool.root.1
[2025-06-06 00:57:25] drwxrwx--x. 2 boinc boinc        68 Jun  5 19:08 shared
[2025-06-06 00:57:25] -rw-r--r--. 2 boinc boinc    508870 Jun  5 19:08 input.tar.gz
[2025-06-06 00:57:25] -rw-r--r--. 1 boinc boinc      6392 Jun  5 19:08 init_data.xml
[2025-06-06 00:57:25] -rw-r--r--. 2 boinc boinc     15093 Jun  5 19:08 start_atlas.sh
[2025-06-06 00:57:25] -rw-r--r--. 1 boinc boinc         0 Jun  5 19:08 boinc_lockfile
[2025-06-06 00:57:25] -rw-r--r--. 1 boinc boinc      2558 Jun  5 19:38 pandaJob.out
[2025-06-06 00:57:25] -rw-------. 1 boinc boinc    983229 Jun  5 19:42 agis_schedconf.cvmfs.json
[2025-06-06 00:57:25] drwx------. 4 boinc boinc      4096 Jun  5 19:42 pilot3
[2025-06-06 00:57:25] -rw-------. 1 boinc boinc 195333859 Jun  6 00:53 HITS.44871837._083440.pool.root.1
[2025-06-06 00:57:25] -rw-r--r--. 1 boinc boinc       531 Jun  6 00:53 boinc_task_state.xml
[2025-06-06 00:57:25] -rw-------. 1 boinc boinc      1013 Jun  6 00:54 memory_monitor_summary.json
[2025-06-06 00:57:25] -rw-------. 1 boinc boinc   1598969 Jun  6 00:54 agis_ddmendpoints.agis.ALL.json
[2025-06-06 00:57:25] -rw-------. 1 boinc boinc    417879 Jun  6 00:54 log.44871837._083440.job.log.tgz.1
[2025-06-06 00:57:25] -rw-------. 1 boinc boinc      7690 Jun  6 00:56 heartbeat.json
[2025-06-06 00:57:25] -rw-------. 1 boinc boinc        95 Jun  6 00:56 pilot_heartbeat.json
[2025-06-06 00:57:25] -rw-------. 1 boinc boinc      4417 Jun  6 00:56 pilotlog.txt
[2025-06-06 00:57:25] -rw-------. 1 boinc boinc   1614631 Jun  6 00:56 log.44871837._083440.job.log.1
[2025-06-06 00:57:25] -rw-------. 1 boinc boinc       357 Jun  6 00:56 output.list
[2025-06-06 00:57:25] -rw-r--r--. 1 boinc boinc       620 Jun  6 00:56 runtime_log
[2025-06-06 00:57:25] -rw-------. 1 boinc boinc   2048000 Jun  6 00:56 result.tar.gz
[2025-06-06 00:57:25] -rw-r--r--. 1 boinc boinc      8673 Jun  6 00:56 runtime_log.err
[2025-06-06 00:57:25] -rw-------. 1 boinc boinc       657 Jun  6 00:56 bDcLDmElTe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmlOTKDmbFQ5zm.diag
[2025-06-06 00:57:25] -rw-r--r--. 1 boinc boinc      8192 Jun  6 00:57 boinc_mmap_file
[2025-06-06 00:57:25] -rw-r--r--. 1 boinc boinc        28 Jun  6 00:57 wrapper_checkpoint.txt
[2025-06-06 00:57:25] -rw-r--r--. 1 boinc boinc     20540 Jun  6 00:57 stderr.txt
[2025-06-06 00:57:25] HITS file was successfully produced:
[2025-06-06 00:57:25] -rw-------. 1 boinc boinc 195333859 Jun  6 00:53 shared/HITS.pool.root.1
[2025-06-06 00:57:25]  *** Contents of shared directory: ***
[2025-06-06 00:57:25] total 411576
[2025-06-06 00:57:25] -rw-r--r--. 2 boinc boinc 223542361 Jun  5 19:08 ATLAS.root_0
[2025-06-06 00:57:25] -rw-r--r--. 2 boinc boinc    508870 Jun  5 19:08 input.tar.gz
[2025-06-06 00:57:25] -rw-r--r--. 2 boinc boinc     15093 Jun  5 19:08 start_atlas.sh
[2025-06-06 00:57:25] -rw-------. 1 boinc boinc 195333859 Jun  6 00:53 HITS.pool.root.1
[2025-06-06 00:57:25] -rw-------. 1 boinc boinc   2048000 Jun  6 00:56 result.tar.gz
00:57:27 (26158): run_atlas exited; CPU time 69313.907421
00:57:27 (26158): called boinc_finish(0)

</stderr_txt>
]]>

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