Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:08:14 (3942000): wrapper (7.7.26015): starting
14:08:14 (3942000): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 14:08:14] Arguments: --nthreads 12
[2025-06-05 14:08:14] Threads: 12
[2025-06-05 14:08:14] Checking for CVMFS
[2025-06-05 14:08:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 14:08:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 14:08:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 14:08:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 14:08:14] 2.12.6.0 32194 2596 163636 146828 3 66 28776134 32935937 12699 16776704 0 10800031 99.676 7712307 37544 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 14:08:14] CVMFS is ok
[2025-06-05 14:08:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 14:08:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 14:08:14] Further information can be found at the LHC@home message board.
[2025-06-05 14:08:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 14:08:14] Checking for apptainer binary...
[2025-06-05 14:08:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 14:08:14] Running /usr/bin/apptainer --version
[2025-06-05 14:08:14] apptainer version 1.4.1-1.el9
[2025-06-05 14:08:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 14:08:14] c6-1-24-4.aglt2.org
[2025-06-05 14:08:14] apptainer works
[2025-06-05 14:08:14] Set ATHENA_PROC_NUMBER=12
[2025-06-05 14:08:14] Set ATHENA_CORE_NUMBER=12
[2025-06-05 14:08:14] Starting ATLAS job with PandaID=6668326741
[2025-06-05 14:08:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 15:45:33]  *** The last 200 lines of the pilot log: ***
[2025-06-05 15:45:33]  is_tar=False
[2025-06-05 15:45:33]  lfn=log.44871837._083050.job.log.tgz.1
[2025-06-05 15:45:33]  mtime=0
[2025-06-05 15:45:33]  protocol_id=None
[2025-06-05 15:45:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 15:45:33]  replicas=None
[2025-06-05 15:45:33]  scope=mc23_13p6TeV
[2025-06-05 15:45:33]  status=None
[2025-06-05 15:45:33]  status_code=0
[2025-06-05 15:45:33]  storage_token=
[2025-06-05 15:45:33]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668326741/log.44871837._083050.job.log.tgz.1
[2025-06-05 15:45:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3b/6b/log.44871837._083050.job.log.tgz.1
[2025-06-05 15:45:33]  workdir=None
[2025-06-05 15:45:33] ]
[2025-06-05 15:45:33] 2025-06-05 19:45:05,859 | INFO     | transferring file log.44871837._083050.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668326741/log.44871837._083050.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 15:45:33] 2025-06-05 19:45:05,859 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668326741/log.44871837._083050.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._083050.job
[2025-06-05 15:45:33] 2025-06-05 19:45:05,874 | INFO     | adding to output.list: log.44871837._083050.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3b/6b/log.44871837._083050.job.log.tg
[2025-06-05 15:45:33] 2025-06-05 19:45:05,875 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 15:45:33] 2025-06-05 19:45:05,875 | INFO     | summary of transferred files:
[2025-06-05 15:45:33] 2025-06-05 19:45:05,875 | INFO     |  -- lfn=log.44871837._083050.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 15:45:33] 2025-06-05 19:45:05,875 | INFO     | stage-out finished correctly
[2025-06-05 15:45:33] 2025-06-05 19:45:07,368 | INFO     | monitor loop #408: job 0:6668326741 is in state 'finished'
[2025-06-05 15:45:33] 2025-06-05 19:45:07,369 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 15:45:33] 2025-06-05 19:45:08,569 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 15:45:33] 2025-06-05 19:45:09,539 | INFO     | job 6668326741 has state=finished
[2025-06-05 15:45:33] 2025-06-05 19:45:09,539 | INFO     | preparing for final server update for job 6668326741 in state='finished'
[2025-06-05 15:45:33] 2025-06-05 19:45:09,540 | INFO     | this job has now completed (state=finished)
[2025-06-05 15:45:33] 2025-06-05 19:45:09,540 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 15:45:33] 2025-06-05 19:45:09,540 | INFO     | log transfer has been attempted: DONE
[2025-06-05 15:45:33] 2025-06-05 19:45:09,540 | INFO     | job 6668326741 has finished - writing final server update
[2025-06-05 15:45:33] 2025-06-05 19:45:09,540 | INFO     | total number of processed events: 400 (read)
[2025-06-05 15:45:33] 2025-06-05 19:45:09,557 | INFO     | executing command: lscpu
[2025-06-05 15:45:33] 2025-06-05 19:45:09,632 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 15:45:33] 2025-06-05 19:45:09,871 | INFO     | monitor loop #409: job 0:6668326741 is in state 'finished'
[2025-06-05 15:45:33] 2025-06-05 19:45:09,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 15:45:33] 2025-06-05 19:45:12,374 | INFO     | monitor loop #410: job 0:6668326741 is in state 'finished'
[2025-06-05 15:45:33] 2025-06-05 19:45:12,374 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 15:45:33] 2025-06-05 19:45:13,700 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 15:45:33] 2025-06-05 19:45:13,700 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668326741/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 15:45:33] 2025-06-05 19:45:13,701 | INFO     | extracted standard info from prmon json
[2025-06-05 15:45:33] 2025-06-05 19:45:13,701 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 15:45:33] 2025-06-05 19:45:13,702 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 15:45:33] 2025-06-05 19:45:13,702 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 15:45:33] 2025-06-05 19:45:13,702 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 15:45:33] 2025-06-05 19:45:13,704 | INFO     | fitting pss+swap vs Time
[2025-06-05 15:45:33] 2025-06-05 19:45:13,704 | INFO     | sum of square deviations: 211286557.81818137
[2025-06-05 15:45:33] 2025-06-05 19:45:13,705 | INFO     | sum of deviations: -97877761.54545432
[2025-06-05 15:45:33] 2025-06-05 19:45:13,705 | INFO     | mean x: 1749149890.5454545
[2025-06-05 15:45:33] 2025-06-05 19:45:13,705 | INFO     | mean y: 2372629.5113636362
[2025-06-05 15:45:33] 2025-06-05 19:45:13,705 | INFO     | -- intersect: 812660220.2694606
[2025-06-05 15:45:33] 2025-06-05 19:45:13,705 | INFO     | intersect: 812660220.2694606
[2025-06-05 15:45:33] 2025-06-05 19:45:13,705 | INFO     | chi2: 0.048783837769728486
[2025-06-05 15:45:33] 2025-06-05 19:45:13,706 | INFO     | -- intersect: 812660220.2694606
[2025-06-05 15:45:33] 2025-06-05 19:45:13,706 | INFO     | current memory leak: -0.46 B/s (using 88 data points, chi2=0.05)
[2025-06-05 15:45:33] 2025-06-05 19:45:13,707 | INFO     | ..............................
[2025-06-05 15:45:33] 2025-06-05 19:45:13,707 | INFO     | . Timing measurements:
[2025-06-05 15:45:33] 2025-06-05 19:45:13,707 | INFO     | . get job = 0 s
[2025-06-05 15:45:33] 2025-06-05 19:45:13,707 | INFO     | . initial setup = 2 s
[2025-06-05 15:45:33] 2025-06-05 19:45:13,707 | INFO     | . payload setup = 6 s
[2025-06-05 15:45:33] 2025-06-05 19:45:13,707 | INFO     | . stage-in = 0 s
[2025-06-05 15:45:33] 2025-06-05 19:45:13,707 | INFO     | . payload execution = 5774 s
[2025-06-05 15:45:33] 2025-06-05 19:45:13,707 | INFO     | . stage-out = 0 s
[2025-06-05 15:45:33] 2025-06-05 19:45:13,707 | INFO     | . log creation = 0 s
[2025-06-05 15:45:33] 2025-06-05 19:45:13,707 | INFO     | ..............................
[2025-06-05 15:45:33] 2025-06-05 19:45:13,798 | INFO     | 
[2025-06-05 15:45:33] 2025-06-05 19:45:13,799 | INFO     | job summary report
[2025-06-05 15:45:33] 2025-06-05 19:45:13,799 | INFO     | --------------------------------------------------
[2025-06-05 15:45:33] 2025-06-05 19:45:13,799 | INFO     | PanDA job id: 6668326741
[2025-06-05 15:45:33] 2025-06-05 19:45:13,799 | INFO     | task id: 44871837
[2025-06-05 15:45:33] 2025-06-05 19:45:13,799 | INFO     | errors: (none)
[2025-06-05 15:45:33] 2025-06-05 19:45:13,799 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 15:45:33] 2025-06-05 19:45:13,800 | INFO     | pilot state: finished 
[2025-06-05 15:45:33] 2025-06-05 19:45:13,800 | INFO     | transexitcode: 0
[2025-06-05 15:45:33] 2025-06-05 19:45:13,800 | INFO     | exeerrorcode: 0
[2025-06-05 15:45:33] 2025-06-05 19:45:13,800 | INFO     | exeerrordiag: 
[2025-06-05 15:45:33] 2025-06-05 19:45:13,800 | INFO     | exitcode: 0
[2025-06-05 15:45:33] 2025-06-05 19:45:13,800 | INFO     | exitmsg: OK
[2025-06-05 15:45:33] 2025-06-05 19:45:13,800 | INFO     | cpuconsumptiontime: 50553 s
[2025-06-05 15:45:33] 2025-06-05 19:45:13,800 | INFO     | nevents: 400
[2025-06-05 15:45:33] 2025-06-05 19:45:13,800 | INFO     | neventsw: 0
[2025-06-05 15:45:33] 2025-06-05 19:45:13,801 | INFO     | pid: 3953400
[2025-06-05 15:45:33] 2025-06-05 19:45:13,801 | INFO     | pgrp: 3953400
[2025-06-05 15:45:33] 2025-06-05 19:45:13,801 | INFO     | corecount: 12
[2025-06-05 15:45:33] 2025-06-05 19:45:13,801 | INFO     | event service: False
[2025-06-05 15:45:33] 2025-06-05 19:45:13,801 | INFO     | sizes: {0: 2397392, 4: 2397598, 11: 2397626, 5784: 2424322, 5785: 2433263, 5788: 2433319, 5793: 2433617}
[2025-06-05 15:45:33] 2025-06-05 19:45:13,801 | INFO     | --------------------------------------------------
[2025-06-05 15:45:33] 2025-06-05 19:45:13,801 | INFO     | 
[2025-06-05 15:45:33] 2025-06-05 19:45:13,802 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 15:45:33] 2025-06-05 19:45:13,821 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 15:45:33] 2025-06-05 19:45:13,822 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 15:45:33] 2025-06-05 19:45:13,822 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 15:45:33] 2025-06-05 19:45:13,822 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 15:45:33] 2025-06-05 19:45:13,822 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 15:45:33] 2025-06-05 19:45:13,822 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 15:45:33] 2025-06-05 19:45:13,822 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 15:45:33] 2025-06-05 19:45:13,822 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 15:45:33] 2025-06-05 19:45:13,822 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 15:45:33] 2025-06-05 19:45:13,822 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 15:45:33] 2025-06-05 19:45:13,822 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 15:45:33] 2025-06-05 19:45:13,822 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 15:45:33] 2025-06-05 19:45:13,822 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 15:45:33] 2025-06-05 19:45:13,822 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 15:45:33] 2025-06-05 19:45:13,822 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 15:45:33] 2025-06-05 19:45:13,822 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 15:45:33] 2025-06-05 19:45:13,822 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 15:45:33] 2025-06-05 19:45:13,823 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 15:45:33] 2025-06-05 19:45:13,823 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 15:45:33] 2025-06-05 19:45:13,823 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 15:45:33] 2025-06-05 19:45:13,823 | INFO     | job 6668326741 has completed (purged errors)
[2025-06-05 15:45:33] 2025-06-05 19:45:13,823 | INFO     | overall cleanup function is called
[2025-06-05 15:45:33] 2025-06-05 19:45:14,831 | INFO     | --- collectZombieJob: --- 10, [3953400]
[2025-06-05 15:45:33] 2025-06-05 19:45:14,832 | INFO     | zombie collector waiting for pid 3953400
[2025-06-05 15:45:33] 2025-06-05 19:45:14,832 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 15:45:33] 2025-06-05 19:45:14,832 | INFO     | collected zombie processes
[2025-06-05 15:45:33] 2025-06-05 19:45:14,832 | INFO     | will attempt to kill all subprocesses of pid=3953400
[2025-06-05 15:45:33] 2025-06-05 19:45:15,377 | INFO     | PID=3946456 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 15:45:33] 2025-06-05 19:45:15,379 | INFO     | .. there are 13 such processes running
[2025-06-05 15:45:33] 2025-06-05 19:45:15,439 | INFO     | process IDs to be killed: [3953400] (in reverse order)
[2025-06-05 15:45:33] 2025-06-05 19:45:15,547 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 15:45:33] 2025-06-05 19:45:15,548 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 15:45:33] 2025-06-05 19:45:15,563 | INFO     | did not find any defunct processes belonging to 3953400
[2025-06-05 15:45:33] 2025-06-05 19:45:15,570 | INFO     | did not find any defunct processes belonging to 3953400
[2025-06-05 15:45:33] 2025-06-05 19:45:15,570 | INFO     | ready for new job
[2025-06-05 15:45:33] 2025-06-05 19:45:15,570 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 15:45:33] 2025-06-05 19:45:15,572 | INFO     | **************************************
[2025-06-05 15:45:33] 2025-06-05 19:45:15,572 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 15:45:33] 2025-06-05 19:45:15,572 | INFO     | **************************************
[2025-06-05 15:45:33] 2025-06-05 19:45:15,572 | INFO     | 
[2025-06-05 15:45:33] 2025-06-05 19:45:15,587 | INFO     | architecture information:
[2025-06-05 15:45:33] 2025-06-05 19:45:15,587 | INFO     | executing command: cat /etc/os-release
[2025-06-05 15:45:33] 2025-06-05 19:45:15,598 | INFO     | cat /etc/os-release:
[2025-06-05 15:45:33] NAME="CentOS Linux"
[2025-06-05 15:45:33] VERSION="7 (Core)"
[2025-06-05 15:45:33] ID="centos"
[2025-06-05 15:45:33] ID_LIKE="rhel fedora"
[2025-06-05 15:45:33] VERSION_ID="7"
[2025-06-05 15:45:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 15:45:33] ANSI_COLOR="0;31"
[2025-06-05 15:45:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 15:45:33] HOME_URL="https://www.centos.org/"
[2025-06-05 15:45:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 15:45:33] 
[2025-06-05 15:45:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 15:45:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 15:45:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 15:45:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 15:45:33] 
[2025-06-05 15:45:33] 2025-06-05 19:45:15,599 | INFO     | **************************************
[2025-06-05 15:45:33] 2025-06-05 19:45:16,101 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 15:45:33] 2025-06-05 19:45:16,117 | INFO     | sufficient remaining disk space (76471599104 B)
[2025-06-05 15:45:33] 2025-06-05 19:45:16,118 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 15:45:33] 2025-06-05 19:45:16,118 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 15:45:33] 2025-06-05 19:45:16,118 | INFO     | update_server=False
[2025-06-05 15:45:33] 2025-06-05 19:45:16,118 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 15:45:33] 2025-06-05 19:45:16,118 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:45:33] 2025-06-05 19:45:16,119 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 15:45:33] 2025-06-05 19:45:16,119 | INFO     | aborting loop
[2025-06-05 15:45:33] 2025-06-05 19:45:16,120 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 15:45:33] 2025-06-05 19:45:16,121 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 15:45:33] 2025-06-05 19:45:16,121 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 15:45:33] 2025-06-05 19:45:16,289 | INFO     | all data control threads have been joined
[2025-06-05 15:45:33] 2025-06-05 19:45:16,434 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 15:45:33] 2025-06-05 19:45:16,483 | INFO     | all job control threads have been joined
[2025-06-05 15:45:33] 2025-06-05 19:45:16,989 | INFO     | all payload control threads have been joined
[2025-06-05 15:45:33] 2025-06-05 19:45:17,124 | INFO     | [job] retrieve thread has finished
[2025-06-05 15:45:33] 2025-06-05 19:45:17,126 | INFO     | [job] job monitor thread has finished
[2025-06-05 15:45:33] 2025-06-05 19:45:17,291 | INFO     | [payload] validate_post thread has finished
[2025-06-05 15:45:33] 2025-06-05 19:45:17,295 | INFO     | [data] control thread has finished
[2025-06-05 15:45:33] 2025-06-05 19:45:17,488 | INFO     | [job] control thread has finished
[2025-06-05 15:45:33] 2025-06-05 19:45:17,653 | INFO     | [data] copytool_in thread has finished
[2025-06-05 15:45:33] 2025-06-05 19:45:17,671 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 15:45:33] 2025-06-05 19:45:17,706 | INFO     | [job] validate thread has finished
[2025-06-05 15:45:33] 2025-06-05 19:45:17,859 | INFO     | [payload] failed_post thread has finished
[2025-06-05 15:45:33] 2025-06-05 19:45:17,881 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 15:45:33] 2025-06-05 19:45:17,994 | INFO     | [payload] control thread has finished
[2025-06-05 15:45:33] 2025-06-05 19:45:18,053 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 15:45:33] 2025-06-05 19:45:18,439 | INFO     | [data] copytool_out thread has finished
[2025-06-05 15:45:33] 2025-06-05 19:45:18,809 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:45:33] 2025-06-05 19:45:19,170 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 15:45:33] 2025-06-05 19:45:19,814 | INFO     | [job] queue monitor thread has finished
[2025-06-05 15:45:33] 2025-06-05 19:45:23,175 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 15:45:33] 2025-06-05 19:45:26,443 | INFO     | job.realtimelogging is not enabled
[2025-06-05 15:45:33] 2025-06-05 19:45:27,448 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 15:45:33] 2025-06-05 19:45:28,554 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140078686680896)>', '<ExcThread(monitor, started 140078051477248)>']
[2025-06-05 15:45:33] 2025-06-05 19:45:29,178 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 15:45:33] 2025-06-05 19:45:29,178 | INFO     | [monitor] control thread has ended
[2025-06-05 15:45:33] 2025-06-05 19:45:33,579 | INFO     | all workflow threads have been joined
[2025-06-05 15:45:33] 2025-06-05 19:45:33,579 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 15:45:33] 2025-06-05 19:45:33,580 | INFO     | traces error code: 0
[2025-06-05 15:45:33] 2025-06-05 19:45:33,580 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 15:45:33] 2025-06-05 19:45:33,761 [wrapper] ==== pilot stdout END ====
[2025-06-05 15:45:33] 2025-06-05 19:45:33,763 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 15:45:33] 2025-06-05 19:45:33,766 [wrapper] pilotpid: 3946456
[2025-06-05 15:45:33] 2025-06-05 19:45:33,768 [wrapper] Pilot exit status: 0
[2025-06-05 15:45:33] 2025-06-05 19:45:33,778 [wrapper] pandaids: 6668326741
[2025-06-05 15:45:33] 2025-06-05 19:45:33,844 [wrapper] cleanup supervisor_pilot   13250 3946457
[2025-06-05 15:45:33] 2025-06-05 19:45:33,849 [wrapper] Test setup, not cleaning
[2025-06-05 15:45:33] 2025-06-05 19:45:33,853 [wrapper] apfmon messages muted
[2025-06-05 15:45:33] 2025-06-05 19:45:33,856 [wrapper] ==== wrapper stdout END ====
[2025-06-05 15:45:33] 2025-06-05 19:45:33,860 [wrapper] ==== wrapper stderr END ====
[2025-06-05 15:45:33]  *** Error codes and diagnostics ***
[2025-06-05 15:45:33]     "exeErrorCode": 0,
[2025-06-05 15:45:33]     "exeErrorDiag": "",
[2025-06-05 15:45:33]     "pilotErrorCode": 0,
[2025-06-05 15:45:33]     "pilotErrorDiag": "",
[2025-06-05 15:45:33]  *** Listing of results directory ***
[2025-06-05 15:45:33] total 422008
[2025-06-05 15:45:33] -rw-r--r--. 1 boincer umatlas    495897 May 28 06:43 pilot3.tar.gz
[2025-06-05 15:45:33] -rw-r--r--. 1 boincer umatlas      5111 May 28 06:47 queuedata.json
[2025-06-05 15:45:33] -rwx------. 1 boincer umatlas     37140 May 28 06:47 runpilot2-wrapper.sh
[2025-06-05 15:45:33] -rw-r--r--. 1 boincer umatlas       100 Jun  5 14:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 15:45:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 14:08 run_atlas
[2025-06-05 15:45:33] -rw-r--r--. 1 boincer umatlas       105 Jun  5 14:08 job.xml
[2025-06-05 15:45:33] -rw-r--r--. 2 boincer umatlas 224716887 Jun  5 14:08 EVNT.44871834._003241.pool.root.1
[2025-06-05 15:45:33] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 14:08 shared
[2025-06-05 15:45:33] -rw-r--r--. 2 boincer umatlas    508882 Jun  5 14:08 input.tar.gz
[2025-06-05 15:45:33] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 14:08 start_atlas.sh
[2025-06-05 15:45:33] -rw-r--r--. 1 boincer umatlas         0 Jun  5 14:08 boinc_lockfile
[2025-06-05 15:45:33] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 14:08 pandaJob.out
[2025-06-05 15:45:33] -rw-------. 1 boincer umatlas    983229 Jun  5 14:08 agis_schedconf.cvmfs.json
[2025-06-05 15:45:33] -rw-------. 1 boincer umatlas   1598969 Jun  5 14:08 agis_ddmendpoints.agis.ALL.json
[2025-06-05 15:45:33] drwx------. 4 boincer umatlas      4096 Jun  5 14:08 pilot3
[2025-06-05 15:45:33] -rw-r--r--. 1 boincer umatlas      6839 Jun  5 15:38 init_data.xml
[2025-06-05 15:45:33] -rw-r--r--. 1 boincer umatlas       530 Jun  5 15:44 boinc_task_state.xml
[2025-06-05 15:45:33] -rw-------. 1 boincer umatlas 201700563 Jun  5 15:44 HITS.44871837._083050.pool.root.1
[2025-06-05 15:45:33] -rw-------. 1 boincer umatlas      1039 Jun  5 15:45 memory_monitor_summary.json
[2025-06-05 15:45:33] -rw-------. 1 boincer umatlas    393369 Jun  5 15:45 log.44871837._083050.job.log.tgz.1
[2025-06-05 15:45:33] -rw-------. 1 boincer umatlas        95 Jun  5 15:45 pilot_heartbeat.json
[2025-06-05 15:45:33] -rw-------. 1 boincer umatlas      7715 Jun  5 15:45 heartbeat.json
[2025-06-05 15:45:33] -rw-r--r--. 1 boincer umatlas        27 Jun  5 15:45 wrapper_checkpoint.txt
[2025-06-05 15:45:33] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 15:45 boinc_mmap_file
[2025-06-05 15:45:33] -rw-------. 1 boincer umatlas      4548 Jun  5 15:45 pilotlog.txt
[2025-06-05 15:45:33] -rw-------. 1 boincer umatlas    551214 Jun  5 15:45 log.44871837._083050.job.log.1
[2025-06-05 15:45:33] -rw-------. 1 boincer umatlas       357 Jun  5 15:45 output.list
[2025-06-05 15:45:33] -rw-r--r--. 1 boincer umatlas       620 Jun  5 15:45 runtime_log
[2025-06-05 15:45:33] -rw-------. 1 boincer umatlas    962560 Jun  5 15:45 result.tar.gz
[2025-06-05 15:45:33] -rw-r--r--. 1 boincer umatlas      8666 Jun  5 15:45 runtime_log.err
[2025-06-05 15:45:33] -rw-------. 1 boincer umatlas       654 Jun  5 15:45 OIVKDmFVTe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHxbKDmZ9hgQm.diag
[2025-06-05 15:45:33] -rw-r--r--. 1 boincer umatlas     21585 Jun  5 15:45 stderr.txt
[2025-06-05 15:45:33] HITS file was successfully produced:
[2025-06-05 15:45:33] -rw-------. 1 boincer umatlas 201700563 Jun  5 15:44 shared/HITS.pool.root.1
[2025-06-05 15:45:33]  *** Contents of shared directory: ***
[2025-06-05 15:45:33] total 417888
[2025-06-05 15:45:33] -rw-r--r--. 2 boincer umatlas 224716887 Jun  5 14:08 ATLAS.root_0
[2025-06-05 15:45:33] -rw-r--r--. 2 boincer umatlas    508882 Jun  5 14:08 input.tar.gz
[2025-06-05 15:45:33] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 14:08 start_atlas.sh
[2025-06-05 15:45:33] -rw-------. 1 boincer umatlas 201700563 Jun  5 15:44 HITS.pool.root.1
[2025-06-05 15:45:33] -rw-------. 1 boincer umatlas    962560 Jun  5 15:45 result.tar.gz
15:45:35 (3942000): run_atlas exited; CPU time 50655.605732
15:45:35 (3942000): called boinc_finish(0)

</stderr_txt>
]]>

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