Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:37:51 (25573): wrapper (7.7.26015): starting
12:37:51 (25573): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 12:37:51] Arguments: --nthreads 8
[2025-06-05 12:37:51] Threads: 8
[2025-06-05 12:37:51] Checking for CVMFS
[2025-06-05 12:37:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 12:37:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 12:37:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 12:37:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 12:37:52] 2.11.2.0 2827 37371 75060 146826 3 1 20132390 20275200 1 130560 0 12073984 99.976 6894376 8102 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 12:37:52] CVMFS is ok
[2025-06-05 12:37:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 12:37:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 12:37:52] Further information can be found at the LHC@home message board.
[2025-06-05 12:37:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 12:37:52] Checking for apptainer binary...
[2025-06-05 12:37:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 12:37:52] Running /usr/bin/apptainer --version
[2025-06-05 12:37:52] apptainer version 1.3.2-1.el7
[2025-06-05 12:37:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 12:37:54] c-115-13.aglt2.org
[2025-06-05 12:37:54] apptainer works
[2025-06-05 12:37:54] Set ATHENA_PROC_NUMBER=8
[2025-06-05 12:37:54] Set ATHENA_CORE_NUMBER=8
[2025-06-05 12:37:54] Starting ATLAS job with PandaID=6668442630
[2025-06-05 12:37:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 15:08:27]  *** The last 200 lines of the pilot log: ***
[2025-06-05 15:08:27] 2025-06-05 19:08:04,963 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 15:08:27] 2025-06-05 19:08:07,466 | INFO     | monitor loop #665: job 0:6668442630 is in state 'finished'
[2025-06-05 15:08:27] 2025-06-05 19:08:07,467 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 15:08:27] 2025-06-05 19:08:07,607 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 15:08:27] 2025-06-05 19:08:07,607 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668442630/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 15:08:27] 2025-06-05 19:08:07,608 | INFO     | extracted standard info from prmon json
[2025-06-05 15:08:27] 2025-06-05 19:08:07,608 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 15:08:27] 2025-06-05 19:08:07,609 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 15:08:27] 2025-06-05 19:08:07,609 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 15:08:27] 2025-06-05 19:08:07,609 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 15:08:27] 2025-06-05 19:08:07,611 [wrapper] supervise_pilot (15 min periods counter: 11)
[2025-06-05 15:08:27] 2025-06-05 19:08:07,612 | INFO     | fitting pss+swap vs Time
[2025-06-05 15:08:27] 2025-06-05 19:08:07,612 | INFO     | sum of square deviations: 984941258.0
[2025-06-05 15:08:27] 2025-06-05 19:08:07,613 | INFO     | sum of deviations: -291980526.00000125
[2025-06-05 15:08:27] 2025-06-05 19:08:07,613 | INFO     | mean x: 1749145976.0
[2025-06-05 15:08:27] 2025-06-05 19:08:07,613 | INFO     | mean y: 2526094.8027210883
[2025-06-05 15:08:27] 2025-06-05 19:08:07,613 | INFO     | -- intersect: 521050989.5363576
[2025-06-05 15:08:27] 2025-06-05 19:08:07,614 | INFO     | intersect: 521050989.5363576
[2025-06-05 15:08:27] 2025-06-05 19:08:07,614 | INFO     | chi2: 1.6779566427399926
[2025-06-05 15:08:27] 2025-06-05 19:08:07,614 | INFO     | sum of square deviations: 887813855.5
[2025-06-05 15:08:27] 2025-06-05 19:08:07,615 | INFO     | sum of deviations: -25824716.000001714
[2025-06-05 15:08:27] 2025-06-05 19:08:07,615 | INFO     | mean x: 1749145823.5
[2025-06-05 15:08:27] 2025-06-05 19:08:07,615 | INFO     | mean y: 2526513.1549295774
[2025-06-05 15:08:27] 2025-06-05 19:08:07,615 | INFO     | -- intersect: 53405640.41188938
[2025-06-05 15:08:27] 2025-06-05 19:08:07,615 | INFO     | intersect: 53405640.41188938
[2025-06-05 15:08:27] 2025-06-05 19:08:07,616 | INFO     | chi2: 1.6787799780528405
[2025-06-05 15:08:27] 2025-06-05 19:08:07,616 | INFO     | current chi2=1.6787799780528405 (change=-0.04906773464083661 %)
[2025-06-05 15:08:27] 2025-06-05 19:08:07,616 | INFO     | right removable region: 141
[2025-06-05 15:08:27] 2025-06-05 19:08:07,616 | INFO     | sum of square deviations: 887813855.5
[2025-06-05 15:08:27] 2025-06-05 19:08:07,617 | INFO     | sum of deviations: -22653094505.0
[2025-06-05 15:08:27] 2025-06-05 19:08:07,617 | INFO     | mean x: 1749146128.5
[2025-06-05 15:08:27] 2025-06-05 19:08:07,617 | INFO     | mean y: 2560649.8732394367
[2025-06-05 15:08:27] 2025-06-05 19:08:07,617 | INFO     | -- intersect: 44633056453.12934
[2025-06-05 15:08:27] 2025-06-05 19:08:07,617 | INFO     | intersect: 44633056453.12934
[2025-06-05 15:08:27] 2025-06-05 19:08:07,618 | INFO     | chi2: 0.17652617242715815
[2025-06-05 15:08:27] 2025-06-05 19:08:07,618 | INFO     | current chi2=0.17652617242715815 (change=89.47969405580693 %)
[2025-06-05 15:08:27] 2025-06-05 19:08:07,618 | INFO     | sum of square deviations: 797291228.0
[2025-06-05 15:08:27] 2025-06-05 19:08:07,619 | INFO     | sum of deviations: -24488805325.0
[2025-06-05 15:08:27] 2025-06-05 19:08:07,619 | INFO     | mean x: 1749146281.0
[2025-06-05 15:08:27] 2025-06-05 19:08:07,619 | INFO     | mean y: 2563685.3649635036
[2025-06-05 15:08:27] 2025-06-05 19:08:07,619 | INFO     | -- intersect: 53727603239.36435
[2025-06-05 15:08:27] 2025-06-05 19:08:07,619 | INFO     | intersect: 53727603239.36435
[2025-06-05 15:08:27] 2025-06-05 19:08:07,619 | INFO     | chi2: 0.1378407955031842
[2025-06-05 15:08:27] 2025-06-05 19:08:07,619 | INFO     | current chi2=0.1378407955031842 (change=21.914810926938948 %)
[2025-06-05 15:08:27] 2025-06-05 19:08:07,620 | INFO     | left removable region: 20
[2025-06-05 15:08:27] 2025-06-05 19:08:07,620 | INFO     | sum of square deviations: 549294020.0
[2025-06-05 15:08:27] 2025-06-05 19:08:07,620 | INFO     | sum of deviations: -15869778666.0
[2025-06-05 15:08:27] 2025-06-05 19:08:07,620 | INFO     | mean x: 1749146403.0
[2025-06-05 15:08:27] 2025-06-05 19:08:07,621 | INFO     | mean y: 2550624.47107438
[2025-06-05 15:08:27] 2025-06-05 19:08:07,621 | INFO     | -- intersect: 50537537825.02359
[2025-06-05 15:08:27] 2025-06-05 19:08:07,621 | INFO     | intersect: 50537537825.02359
[2025-06-05 15:08:27] 2025-06-05 19:08:07,621 | INFO     | chi2: 0.12400940679373812
[2025-06-05 15:08:27] 2025-06-05 19:08:07,621 | INFO     | -- intersect: 50537537825.02359
[2025-06-05 15:08:27] 2025-06-05 19:08:07,621 | INFO     | current memory leak: -28.89 B/s (using 121 data points, chi2=0.12)
[2025-06-05 15:08:27] 2025-06-05 19:08:07,622 | INFO     | ..............................
[2025-06-05 15:08:27] 2025-06-05 19:08:07,622 | INFO     | . Timing measurements:
[2025-06-05 15:08:27] 2025-06-05 19:08:07,622 | INFO     | . get job = 0 s
[2025-06-05 15:08:27] 2025-06-05 19:08:07,622 | INFO     | . initial setup = 2 s
[2025-06-05 15:08:27] 2025-06-05 19:08:07,622 | INFO     | . payload setup = 11 s
[2025-06-05 15:08:27] 2025-06-05 19:08:07,622 | INFO     | . stage-in = 0 s
[2025-06-05 15:08:27] 2025-06-05 19:08:07,622 | INFO     | . payload execution = 8959 s
[2025-06-05 15:08:27] 2025-06-05 19:08:07,622 | INFO     | . stage-out = 0 s
[2025-06-05 15:08:27] 2025-06-05 19:08:07,623 | INFO     | . log creation = 0 s
[2025-06-05 15:08:27] 2025-06-05 19:08:07,623 | INFO     | ..............................
[2025-06-05 15:08:27] 2025-06-05 19:08:07,892 | INFO     | 
[2025-06-05 15:08:27] 2025-06-05 19:08:07,893 | INFO     | job summary report
[2025-06-05 15:08:27] 2025-06-05 19:08:07,893 | INFO     | --------------------------------------------------
[2025-06-05 15:08:27] 2025-06-05 19:08:07,893 | INFO     | PanDA job id: 6668442630
[2025-06-05 15:08:27] 2025-06-05 19:08:07,893 | INFO     | task id: 44871837
[2025-06-05 15:08:27] 2025-06-05 19:08:07,893 | INFO     | errors: (none)
[2025-06-05 15:08:27] 2025-06-05 19:08:07,893 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 15:08:27] 2025-06-05 19:08:07,894 | INFO     | pilot state: finished 
[2025-06-05 15:08:27] 2025-06-05 19:08:07,894 | INFO     | transexitcode: 0
[2025-06-05 15:08:27] 2025-06-05 19:08:07,894 | INFO     | exeerrorcode: 0
[2025-06-05 15:08:27] 2025-06-05 19:08:07,894 | INFO     | exeerrordiag: 
[2025-06-05 15:08:27] 2025-06-05 19:08:07,894 | INFO     | exitcode: 0
[2025-06-05 15:08:27] 2025-06-05 19:08:07,894 | INFO     | exitmsg: OK
[2025-06-05 15:08:27] 2025-06-05 19:08:07,895 | INFO     | cpuconsumptiontime: 66144 s
[2025-06-05 15:08:27] 2025-06-05 19:08:07,895 | INFO     | nevents: 400
[2025-06-05 15:08:27] 2025-06-05 19:08:07,895 | INFO     | neventsw: 0
[2025-06-05 15:08:27] 2025-06-05 19:08:07,895 | INFO     | pid: 3406
[2025-06-05 15:08:27] 2025-06-05 19:08:07,895 | INFO     | pgrp: 3406
[2025-06-05 15:08:27] 2025-06-05 19:08:07,895 | INFO     | corecount: 8
[2025-06-05 15:08:27] 2025-06-05 19:08:07,896 | INFO     | event service: False
[2025-06-05 15:08:27] 2025-06-05 19:08:07,896 | INFO     | sizes: {0: 2397391, 6: 2397597, 11: 2397625, 8974: 2425661, 8975: 2434658, 8981: 2434772}
[2025-06-05 15:08:27] 2025-06-05 19:08:07,896 | INFO     | --------------------------------------------------
[2025-06-05 15:08:27] 2025-06-05 19:08:07,896 | INFO     | 
[2025-06-05 15:08:27] 2025-06-05 19:08:07,896 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 15:08:27] 2025-06-05 19:08:07,927 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 15:08:27] 2025-06-05 19:08:07,927 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 15:08:27] 2025-06-05 19:08:07,928 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 15:08:27] 2025-06-05 19:08:07,928 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 15:08:27] 2025-06-05 19:08:07,928 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 15:08:27] 2025-06-05 19:08:07,928 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 15:08:27] 2025-06-05 19:08:07,928 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 15:08:27] 2025-06-05 19:08:07,929 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 15:08:27] 2025-06-05 19:08:07,929 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 15:08:27] 2025-06-05 19:08:07,929 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 15:08:27] 2025-06-05 19:08:07,929 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 15:08:27] 2025-06-05 19:08:07,929 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 15:08:27] 2025-06-05 19:08:07,929 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 15:08:27] 2025-06-05 19:08:07,929 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 15:08:27] 2025-06-05 19:08:07,930 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 15:08:27] 2025-06-05 19:08:07,930 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 15:08:27] 2025-06-05 19:08:07,930 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 15:08:27] 2025-06-05 19:08:07,930 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 15:08:27] 2025-06-05 19:08:07,930 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 15:08:27] 2025-06-05 19:08:07,930 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 15:08:27] 2025-06-05 19:08:07,931 | INFO     | job 6668442630 has completed (purged errors)
[2025-06-05 15:08:27] 2025-06-05 19:08:07,931 | INFO     | overall cleanup function is called
[2025-06-05 15:08:27] 2025-06-05 19:08:08,939 | INFO     | --- collectZombieJob: --- 10, [3406]
[2025-06-05 15:08:27] 2025-06-05 19:08:08,939 | INFO     | zombie collector waiting for pid 3406
[2025-06-05 15:08:27] 2025-06-05 19:08:08,939 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 15:08:27] 2025-06-05 19:08:08,939 | INFO     | collected zombie processes
[2025-06-05 15:08:27] 2025-06-05 19:08:08,940 | INFO     | will attempt to kill all subprocesses of pid=3406
[2025-06-05 15:08:27] 2025-06-05 19:08:09,026 | INFO     | process IDs to be killed: [3406] (in reverse order)
[2025-06-05 15:08:27] 2025-06-05 19:08:09,084 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 15:08:27] 2025-06-05 19:08:09,084 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 15:08:27] 2025-06-05 19:08:09,088 | INFO     | did not find any defunct processes belonging to 3406
[2025-06-05 15:08:27] 2025-06-05 19:08:09,091 | INFO     | did not find any defunct processes belonging to 3406
[2025-06-05 15:08:27] 2025-06-05 19:08:09,091 | INFO     | ready for new job
[2025-06-05 15:08:27] 2025-06-05 19:08:09,092 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 15:08:27] 2025-06-05 19:08:09,093 | INFO     | **************************************
[2025-06-05 15:08:27] 2025-06-05 19:08:09,093 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 15:08:27] 2025-06-05 19:08:09,093 | INFO     | **************************************
[2025-06-05 15:08:27] 2025-06-05 19:08:09,093 | INFO     | 
[2025-06-05 15:08:27] 2025-06-05 19:08:09,094 | INFO     | architecture information:
[2025-06-05 15:08:27] 2025-06-05 19:08:09,095 | INFO     | executing command: cat /etc/os-release
[2025-06-05 15:08:27] 2025-06-05 19:08:09,112 | INFO     | cat /etc/os-release:
[2025-06-05 15:08:27] NAME="CentOS Linux"
[2025-06-05 15:08:27] VERSION="7 (Core)"
[2025-06-05 15:08:27] ID="centos"
[2025-06-05 15:08:27] ID_LIKE="rhel fedora"
[2025-06-05 15:08:27] VERSION_ID="7"
[2025-06-05 15:08:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 15:08:27] ANSI_COLOR="0;31"
[2025-06-05 15:08:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 15:08:27] HOME_URL="https://www.centos.org/"
[2025-06-05 15:08:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 15:08:27] 
[2025-06-05 15:08:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 15:08:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 15:08:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 15:08:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 15:08:27] 
[2025-06-05 15:08:27] 2025-06-05 19:08:09,113 | INFO     | **************************************
[2025-06-05 15:08:27] 2025-06-05 19:08:09,616 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 15:08:27] 2025-06-05 19:08:09,634 | INFO     | sufficient remaining disk space (18606981120 B)
[2025-06-05 15:08:27] 2025-06-05 19:08:09,634 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 15:08:27] 2025-06-05 19:08:09,635 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 15:08:27] 2025-06-05 19:08:09,635 | INFO     | update_server=False
[2025-06-05 15:08:27] 2025-06-05 19:08:09,635 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 15:08:27] 2025-06-05 19:08:09,635 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 15:08:27] 2025-06-05 19:08:09,636 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 15:08:27] 2025-06-05 19:08:09,636 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 15:08:27] 2025-06-05 19:08:09,636 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 15:08:27] 2025-06-05 19:08:09,636 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:08:27] 2025-06-05 19:08:09,706 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 15:08:27] 2025-06-05 19:08:09,970 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 15:08:27] 2025-06-05 19:08:09,971 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 15:08:27] 2025-06-05 19:08:09,972 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:08:27] 2025-06-05 19:08:09,972 | INFO     | will abort loop
[2025-06-05 15:08:27] 2025-06-05 19:08:10,051 | INFO     | all data control threads have been joined
[2025-06-05 15:08:27] 2025-06-05 19:08:10,473 | INFO     | all job control threads have been joined
[2025-06-05 15:08:27] 2025-06-05 19:08:10,522 | INFO     | all payload control threads have been joined
[2025-06-05 15:08:27] 2025-06-05 19:08:10,636 | INFO     | [job] retrieve thread has finished
[2025-06-05 15:08:27] 2025-06-05 19:08:10,642 | INFO     | [job] queue monitor thread has finished
[2025-06-05 15:08:27] 2025-06-05 19:08:10,722 | INFO     | [job] validate thread has finished
[2025-06-05 15:08:27] 2025-06-05 19:08:10,724 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 15:08:27] 2025-06-05 19:08:10,886 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 15:08:27] 2025-06-05 19:08:10,893 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 15:08:27] 2025-06-05 19:08:10,906 | INFO     | [data] copytool_in thread has finished
[2025-06-05 15:08:27] 2025-06-05 19:08:10,977 | INFO     | [job] job monitor thread has finished
[2025-06-05 15:08:27] 2025-06-05 19:08:11,056 | INFO     | [payload] failed_post thread has finished
[2025-06-05 15:08:27] 2025-06-05 19:08:11,057 | INFO     | [data] control thread has finished
[2025-06-05 15:08:27] 2025-06-05 19:08:11,397 | INFO     | [payload] validate_post thread has finished
[2025-06-05 15:08:27] 2025-06-05 19:08:11,479 | INFO     | [job] control thread has finished
[2025-06-05 15:08:27] 2025-06-05 19:08:11,524 | INFO     | [payload] control thread has finished
[2025-06-05 15:08:27] 2025-06-05 19:08:11,712 | INFO     | [data] copytool_out thread has finished
[2025-06-05 15:08:27] 2025-06-05 19:08:12,284 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 15:08:27] 2025-06-05 19:08:16,290 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 15:08:27] 2025-06-05 19:08:20,001 | INFO     | job.realtimelogging is not enabled
[2025-06-05 15:08:27] 2025-06-05 19:08:21,005 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 15:08:27] 2025-06-05 19:08:22,323 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140321883588416)>', '<ExcThread(monitor, started 140320977172224)>']
[2025-06-05 15:08:27] 2025-06-05 19:08:22,693 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 15:08:27] 2025-06-05 19:08:22,693 | INFO     | [monitor] control thread has ended
[2025-06-05 15:08:27] 2025-06-05 19:08:27,349 | INFO     | all workflow threads have been joined
[2025-06-05 15:08:27] 2025-06-05 19:08:27,349 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 15:08:27] 2025-06-05 19:08:27,350 | INFO     | traces error code: 0
[2025-06-05 15:08:27] 2025-06-05 19:08:27,350 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 15:08:27] 2025-06-05 19:08:27,455 [wrapper] ==== pilot stdout END ====
[2025-06-05 15:08:27] 2025-06-05 19:08:27,459 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 15:08:27] 2025-06-05 19:08:27,463 [wrapper] pilotpid: 29279
[2025-06-05 15:08:27] 2025-06-05 19:08:27,468 [wrapper] Pilot exit status: 0
[2025-06-05 15:08:27] 2025-06-05 19:08:27,485 [wrapper] pandaids: 6668442630
[2025-06-05 15:08:27] 2025-06-05 19:08:27,527 [wrapper] cleanup supervisor_pilot 24589 29280
[2025-06-05 15:08:27] 2025-06-05 19:08:27,532 [wrapper] Test setup, not cleaning
[2025-06-05 15:08:27] 2025-06-05 19:08:27,537 [wrapper] apfmon messages muted
[2025-06-05 15:08:27] 2025-06-05 19:08:27,541 [wrapper] ==== wrapper stdout END ====
[2025-06-05 15:08:27] 2025-06-05 19:08:27,546 [wrapper] ==== wrapper stderr END ====
[2025-06-05 15:08:27]  *** Error codes and diagnostics ***
[2025-06-05 15:08:27]     "exeErrorCode": 0,
[2025-06-05 15:08:27]     "exeErrorDiag": "",
[2025-06-05 15:08:27]     "pilotErrorCode": 0,
[2025-06-05 15:08:27]     "pilotErrorDiag": "",
[2025-06-05 15:08:27]  *** Listing of results directory ***
[2025-06-05 15:08:27] total 419212
[2025-06-05 15:08:27] -rw-r--r-- 1 boincer umatlas      5111 May 28 08:59 queuedata.json
[2025-06-05 15:08:27] -rw-r--r-- 1 boincer umatlas    495897 May 28 09:01 pilot3.tar.gz
[2025-06-05 15:08:27] -rwx------ 1 boincer umatlas     37140 May 28 09:02 runpilot2-wrapper.sh
[2025-06-05 15:08:27] -rw-r--r-- 1 boincer umatlas       100 Jun  5 12:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 15:08:27] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 12:37 run_atlas
[2025-06-05 15:08:27] -rw-r--r-- 1 boincer umatlas       105 Jun  5 12:37 job.xml
[2025-06-05 15:08:27] -rw-r--r-- 2 boincer umatlas 224663582 Jun  5 12:37 EVNT.44871834._003299.pool.root.1
[2025-06-05 15:08:27] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 12:37 start_atlas.sh
[2025-06-05 15:08:27] drwxrwx--x 2 boincer umatlas      4096 Jun  5 12:37 shared
[2025-06-05 15:08:27] -rw-r--r-- 2 boincer umatlas    508878 Jun  5 12:37 input.tar.gz
[2025-06-05 15:08:27] -rw-r--r-- 1 boincer umatlas         0 Jun  5 12:37 boinc_lockfile
[2025-06-05 15:08:27] -rw-r--r-- 1 boincer umatlas      2558 Jun  5 12:37 pandaJob.out
[2025-06-05 15:08:27] -rw------- 1 boincer umatlas    983229 Jun  5 12:38 agis_schedconf.cvmfs.json
[2025-06-05 15:08:27] -rw------- 1 boincer umatlas   1598969 Jun  5 12:38 agis_ddmendpoints.agis.ALL.json
[2025-06-05 15:08:27] drwx------ 4 boincer umatlas      4096 Jun  5 12:38 pilot3
[2025-06-05 15:08:27] -rw-r--r-- 1 boincer umatlas      5825 Jun  5 15:03 init_data.xml
[2025-06-05 15:08:27] -rw------- 1 boincer umatlas 198466168 Jun  5 15:07 HITS.44871837._084552.pool.root.1
[2025-06-05 15:08:27] -rw-r--r-- 1 boincer umatlas       529 Jun  5 15:07 boinc_task_state.xml
[2025-06-05 15:08:27] -rw------- 1 boincer umatlas      1049 Jun  5 15:07 memory_monitor_summary.json
[2025-06-05 15:08:27] -rw------- 1 boincer umatlas    342275 Jun  5 15:08 log.44871837._084552.job.log.tgz.1
[2025-06-05 15:08:27] -rw------- 1 boincer umatlas        95 Jun  5 15:08 pilot_heartbeat.json
[2025-06-05 15:08:27] -rw------- 1 boincer umatlas      7750 Jun  5 15:08 heartbeat.json
[2025-06-05 15:08:27] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 15:08 boinc_mmap_file
[2025-06-05 15:08:27] -rw-r--r-- 1 boincer umatlas        27 Jun  5 15:08 wrapper_checkpoint.txt
[2025-06-05 15:08:27] -rw------- 1 boincer umatlas      4734 Jun  5 15:08 pilotlog.txt
[2025-06-05 15:08:27] -rw------- 1 boincer umatlas    811526 Jun  5 15:08 log.44871837._084552.job.log.1
[2025-06-05 15:08:27] -rw------- 1 boincer umatlas       357 Jun  5 15:08 output.list
[2025-06-05 15:08:27] -rw-r--r-- 1 boincer umatlas       620 Jun  5 15:08 runtime_log
[2025-06-05 15:08:27] -rw------- 1 boincer umatlas   1177600 Jun  5 15:08 result.tar.gz
[2025-06-05 15:08:27] -rw-r--r-- 1 boincer umatlas      8659 Jun  5 15:08 runtime_log.err
[2025-06-05 15:08:27] -rw------- 1 boincer umatlas       661 Jun  5 15:08 Cl0NDmLbVe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEBcKDmPrcYam.diag
[2025-06-05 15:08:27] -rw-r--r-- 1 boincer umatlas     20960 Jun  5 15:08 stderr.txt
[2025-06-05 15:08:27] HITS file was successfully produced:
[2025-06-05 15:08:27] -rw------- 1 boincer umatlas 198466168 Jun  5 15:07 shared/HITS.pool.root.1
[2025-06-05 15:08:27]  *** Contents of shared directory: ***
[2025-06-05 15:08:27] total 414888
[2025-06-05 15:08:27] -rw-r--r-- 2 boincer umatlas 224663582 Jun  5 12:37 ATLAS.root_0
[2025-06-05 15:08:27] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 12:37 start_atlas.sh
[2025-06-05 15:08:27] -rw-r--r-- 2 boincer umatlas    508878 Jun  5 12:37 input.tar.gz
[2025-06-05 15:08:27] -rw------- 1 boincer umatlas 198466168 Jun  5 15:07 HITS.pool.root.1
[2025-06-05 15:08:27] -rw------- 1 boincer umatlas   1177600 Jun  5 15:08 result.tar.gz
15:08:28 (25573): run_atlas exited; CPU time 66120.092834
15:08:28 (25573): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN