Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:37:21 (4040): wrapper (7.7.26015): starting
12:37:21 (4040): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 12:37:21] Arguments: --nthreads 12
[2025-06-05 12:37:21] Threads: 12
[2025-06-05 12:37:21] Checking for CVMFS
[2025-06-05 12:37:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 12:37:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 12:37:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 12:37:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 12:37:21] 2.11.2.0 2913 37371 90264 146826 1 12 19905200 20275201 1 130560 0 16966977 99.983 6806292 8121 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 12:37:21] CVMFS is ok
[2025-06-05 12:37:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 12:37:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 12:37:21] Further information can be found at the LHC@home message board.
[2025-06-05 12:37:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 12:37:21] Checking for apptainer binary...
[2025-06-05 12:37:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 12:37:21] Running /usr/bin/apptainer --version
[2025-06-05 12:37:21] apptainer version 1.3.2-1.el7
[2025-06-05 12:37:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 12:37:23] c-205-6.aglt2.org
[2025-06-05 12:37:23] apptainer works
[2025-06-05 12:37:23] Set ATHENA_PROC_NUMBER=12
[2025-06-05 12:37:23] Set ATHENA_CORE_NUMBER=12
[2025-06-05 12:37:23] Starting ATLAS job with PandaID=6668327082
[2025-06-05 12:37:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 14:15:15]  *** The last 200 lines of the pilot log: ***
[2025-06-05 14:15:15]  guid=8c2d49e7-83ed-40e4-bccc-67a6c2589d98
[2025-06-05 14:15:15]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 14:15:15]  is_altstaged=None
[2025-06-05 14:15:15]  is_tar=False
[2025-06-05 14:15:15]  lfn=log.44871837._083172.job.log.tgz.1
[2025-06-05 14:15:15]  mtime=0
[2025-06-05 14:15:15]  protocol_id=None
[2025-06-05 14:15:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 14:15:15]  replicas=None
[2025-06-05 14:15:15]  scope=mc23_13p6TeV
[2025-06-05 14:15:15]  status=None
[2025-06-05 14:15:15]  status_code=0
[2025-06-05 14:15:15]  storage_token=
[2025-06-05 14:15:15]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668327082/log.44871837._083172.job.log.tgz.1
[2025-06-05 14:15:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/21/4e/log.44871837._083172.job.log.tgz.1
[2025-06-05 14:15:15]  workdir=None
[2025-06-05 14:15:15] ]
[2025-06-05 14:15:15] 2025-06-05 18:14:49,429 | INFO     | transferring file log.44871837._083172.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668327082/log.44871837._083172.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 14:15:15] 2025-06-05 18:14:49,429 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668327082/log.44871837._083172.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._083172.job
[2025-06-05 14:15:15] 2025-06-05 18:14:49,451 | INFO     | adding to output.list: log.44871837._083172.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/21/4e/log.44871837._083172.job.log.tg
[2025-06-05 14:15:15] 2025-06-05 18:14:49,452 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 14:15:15] 2025-06-05 18:14:49,452 | INFO     | summary of transferred files:
[2025-06-05 14:15:15] 2025-06-05 18:14:49,452 | INFO     |  -- lfn=log.44871837._083172.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 14:15:15] 2025-06-05 18:14:49,453 | INFO     | stage-out finished correctly
[2025-06-05 14:15:15] 2025-06-05 18:14:50,091 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 14:15:15] 2025-06-05 18:14:50,891 | INFO     | job 6668327082 has state=finished
[2025-06-05 14:15:15] 2025-06-05 18:14:50,891 | INFO     | preparing for final server update for job 6668327082 in state='finished'
[2025-06-05 14:15:15] 2025-06-05 18:14:50,892 | INFO     | this job has now completed (state=finished)
[2025-06-05 14:15:15] 2025-06-05 18:14:50,892 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 14:15:15] 2025-06-05 18:14:50,892 | INFO     | log transfer has been attempted: DONE
[2025-06-05 14:15:15] 2025-06-05 18:14:50,892 | INFO     | job 6668327082 has finished - writing final server update
[2025-06-05 14:15:15] 2025-06-05 18:14:50,893 | INFO     | total number of processed events: 400 (read)
[2025-06-05 14:15:15] 2025-06-05 18:14:50,894 | INFO     | executing command: lscpu
[2025-06-05 14:15:15] 2025-06-05 18:14:50,922 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 14:15:15] 2025-06-05 18:14:55,224 | WARNING  | process 14180 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 14:15:15] 2025-06-05 18:14:55,225 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668327082/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 14:15:15] 2025-06-05 18:14:55,313 | INFO     | number of running child processes to parent process 14180: 1
[2025-06-05 14:15:15] 2025-06-05 18:14:55,313 | INFO     | maximum number of monitored processes: 6
[2025-06-05 14:15:15] 2025-06-05 18:14:55,460 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 14:15:15] 2025-06-05 18:14:55,461 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668327082/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 14:15:15] 2025-06-05 18:14:55,461 | INFO     | extracted standard info from prmon json
[2025-06-05 14:15:15] 2025-06-05 18:14:55,462 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 14:15:15] 2025-06-05 18:14:55,462 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 14:15:15] 2025-06-05 18:14:55,462 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 14:15:15] 2025-06-05 18:14:55,462 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 14:15:15] 2025-06-05 18:14:55,465 | INFO     | fitting pss+swap vs Time
[2025-06-05 14:15:15] 2025-06-05 18:14:55,466 | INFO     | sum of square deviations: 218571540.0
[2025-06-05 14:15:15] 2025-06-05 18:14:55,466 | INFO     | sum of deviations: -13807899305.0
[2025-06-05 14:15:15] 2025-06-05 18:14:55,466 | INFO     | mean x: 1749144476.0
[2025-06-05 14:15:15] 2025-06-05 18:14:55,467 | INFO     | mean y: 2789482.0
[2025-06-05 14:15:15] 2025-06-05 18:14:55,467 | INFO     | -- intersect: 110502128940.85631
[2025-06-05 14:15:15] 2025-06-05 18:14:55,467 | INFO     | intersect: 110502128940.85631
[2025-06-05 14:15:15] 2025-06-05 18:14:55,467 | INFO     | chi2: 0.07157536823411607
[2025-06-05 14:15:15] 2025-06-05 18:14:55,467 | INFO     | -- intersect: 110502128940.85631
[2025-06-05 14:15:15] 2025-06-05 18:14:55,468 | INFO     | current memory leak: -63.17 B/s (using 89 data points, chi2=0.07)
[2025-06-05 14:15:15] 2025-06-05 18:14:55,468 | INFO     | ..............................
[2025-06-05 14:15:15] 2025-06-05 18:14:55,468 | INFO     | . Timing measurements:
[2025-06-05 14:15:15] 2025-06-05 18:14:55,469 | INFO     | . get job = 0 s
[2025-06-05 14:15:15] 2025-06-05 18:14:55,469 | INFO     | . initial setup = 2 s
[2025-06-05 14:15:15] 2025-06-05 18:14:55,469 | INFO     | . payload setup = 9 s
[2025-06-05 14:15:15] 2025-06-05 18:14:55,469 | INFO     | . stage-in = 0 s
[2025-06-05 14:15:15] 2025-06-05 18:14:55,469 | INFO     | . payload execution = 5803 s
[2025-06-05 14:15:15] 2025-06-05 18:14:55,469 | INFO     | . stage-out = 0 s
[2025-06-05 14:15:15] 2025-06-05 18:14:55,469 | INFO     | . log creation = 0 s
[2025-06-05 14:15:15] 2025-06-05 18:14:55,469 | INFO     | ..............................
[2025-06-05 14:15:15] 2025-06-05 18:14:55,551 | INFO     | 
[2025-06-05 14:15:15] 2025-06-05 18:14:55,552 | INFO     | job summary report
[2025-06-05 14:15:15] 2025-06-05 18:14:55,552 | INFO     | --------------------------------------------------
[2025-06-05 14:15:15] 2025-06-05 18:14:55,552 | INFO     | PanDA job id: 6668327082
[2025-06-05 14:15:15] 2025-06-05 18:14:55,552 | INFO     | task id: 44871837
[2025-06-05 14:15:15] 2025-06-05 18:14:55,552 | INFO     | errors: (none)
[2025-06-05 14:15:15] 2025-06-05 18:14:55,552 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 14:15:15] 2025-06-05 18:14:55,553 | INFO     | pilot state: finished 
[2025-06-05 14:15:15] 2025-06-05 18:14:55,553 | INFO     | transexitcode: 0
[2025-06-05 14:15:15] 2025-06-05 18:14:55,553 | INFO     | exeerrorcode: 0
[2025-06-05 14:15:15] 2025-06-05 18:14:55,553 | INFO     | exeerrordiag: 
[2025-06-05 14:15:15] 2025-06-05 18:14:55,553 | INFO     | exitcode: 0
[2025-06-05 14:15:15] 2025-06-05 18:14:55,553 | INFO     | exitmsg: OK
[2025-06-05 14:15:15] 2025-06-05 18:14:55,553 | INFO     | cpuconsumptiontime: 64454 s
[2025-06-05 14:15:15] 2025-06-05 18:14:55,553 | INFO     | nevents: 400
[2025-06-05 14:15:15] 2025-06-05 18:14:55,553 | INFO     | neventsw: 0
[2025-06-05 14:15:15] 2025-06-05 18:14:55,553 | INFO     | pid: 14180
[2025-06-05 14:15:15] 2025-06-05 18:14:55,554 | INFO     | pgrp: 14180
[2025-06-05 14:15:15] 2025-06-05 18:14:55,554 | INFO     | corecount: 12
[2025-06-05 14:15:15] 2025-06-05 18:14:55,554 | INFO     | event service: False
[2025-06-05 14:15:15] 2025-06-05 18:14:55,554 | INFO     | sizes: {0: 2397165, 1: 2397420, 6: 2397626, 12: 2397654, 5817: 2424181, 5818: 2433306, 5824: 2433420}
[2025-06-05 14:15:15] 2025-06-05 18:14:55,554 | INFO     | --------------------------------------------------
[2025-06-05 14:15:15] 2025-06-05 18:14:55,554 | INFO     | 
[2025-06-05 14:15:15] 2025-06-05 18:14:55,554 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 14:15:15] 2025-06-05 18:14:55,576 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 14:15:15] 2025-06-05 18:14:55,577 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 14:15:15] 2025-06-05 18:14:55,577 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 14:15:15] 2025-06-05 18:14:55,577 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 14:15:15] 2025-06-05 18:14:55,577 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 14:15:15] 2025-06-05 18:14:55,577 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 14:15:15] 2025-06-05 18:14:55,577 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 14:15:15] 2025-06-05 18:14:55,578 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 14:15:15] 2025-06-05 18:14:55,578 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 14:15:15] 2025-06-05 18:14:55,578 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 14:15:15] 2025-06-05 18:14:55,578 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 14:15:15] 2025-06-05 18:14:55,578 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 14:15:15] 2025-06-05 18:14:55,578 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 14:15:15] 2025-06-05 18:14:55,579 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 14:15:15] 2025-06-05 18:14:55,579 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 14:15:15] 2025-06-05 18:14:55,579 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 14:15:15] 2025-06-05 18:14:55,579 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 14:15:15] 2025-06-05 18:14:55,579 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 14:15:15] 2025-06-05 18:14:55,579 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 14:15:15] 2025-06-05 18:14:55,580 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 14:15:15] 2025-06-05 18:14:55,580 | INFO     | job 6668327082 has completed (purged errors)
[2025-06-05 14:15:15] 2025-06-05 18:14:55,580 | INFO     | overall cleanup function is called
[2025-06-05 14:15:15] 2025-06-05 18:14:56,389 | INFO     | 5843s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 14:15:15] 2025-06-05 18:14:56,588 | INFO     | --- collectZombieJob: --- 10, [14180]
[2025-06-05 14:15:15] 2025-06-05 18:14:56,588 | INFO     | zombie collector waiting for pid 14180
[2025-06-05 14:15:15] 2025-06-05 18:14:56,588 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 14:15:15] 2025-06-05 18:14:56,589 | INFO     | collected zombie processes
[2025-06-05 14:15:15] 2025-06-05 18:14:56,589 | INFO     | will attempt to kill all subprocesses of pid=14180
[2025-06-05 14:15:15] 2025-06-05 18:14:56,678 | INFO     | process IDs to be killed: [14180] (in reverse order)
[2025-06-05 14:15:15] 2025-06-05 18:14:56,729 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 14:15:15] 2025-06-05 18:14:56,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 14:15:15] 2025-06-05 18:14:56,733 | INFO     | did not find any defunct processes belonging to 14180
[2025-06-05 14:15:15] 2025-06-05 18:14:56,736 | INFO     | did not find any defunct processes belonging to 14180
[2025-06-05 14:15:15] 2025-06-05 18:14:56,737 | INFO     | ready for new job
[2025-06-05 14:15:15] 2025-06-05 18:14:56,737 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 14:15:15] 2025-06-05 18:14:56,738 | INFO     | **************************************
[2025-06-05 14:15:15] 2025-06-05 18:14:56,738 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 14:15:15] 2025-06-05 18:14:56,739 | INFO     | **************************************
[2025-06-05 14:15:15] 2025-06-05 18:14:56,739 | INFO     | 
[2025-06-05 14:15:15] 2025-06-05 18:14:56,739 | INFO     | architecture information:
[2025-06-05 14:15:15] 2025-06-05 18:14:56,740 | INFO     | executing command: cat /etc/os-release
[2025-06-05 14:15:15] 2025-06-05 18:14:56,755 | INFO     | cat /etc/os-release:
[2025-06-05 14:15:15] NAME="CentOS Linux"
[2025-06-05 14:15:15] VERSION="7 (Core)"
[2025-06-05 14:15:15] ID="centos"
[2025-06-05 14:15:15] ID_LIKE="rhel fedora"
[2025-06-05 14:15:15] VERSION_ID="7"
[2025-06-05 14:15:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 14:15:15] ANSI_COLOR="0;31"
[2025-06-05 14:15:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 14:15:15] HOME_URL="https://www.centos.org/"
[2025-06-05 14:15:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 14:15:15] 
[2025-06-05 14:15:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 14:15:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 14:15:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 14:15:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 14:15:15] 
[2025-06-05 14:15:15] 2025-06-05 18:14:56,755 | INFO     | **************************************
[2025-06-05 14:15:15] 2025-06-05 18:14:57,258 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 14:15:15] 2025-06-05 18:14:57,274 | INFO     | sufficient remaining disk space (29370613760 B)
[2025-06-05 14:15:15] 2025-06-05 18:14:57,275 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 14:15:15] 2025-06-05 18:14:57,275 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 14:15:15] 2025-06-05 18:14:57,275 | INFO     | update_server=False
[2025-06-05 14:15:15] 2025-06-05 18:14:57,275 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 14:15:15] 2025-06-05 18:14:57,276 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:15:15] 2025-06-05 18:14:57,276 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:15:15] 2025-06-05 18:14:57,276 | INFO     | aborting loop
[2025-06-05 14:15:15] 2025-06-05 18:14:57,507 | INFO     | PID=7629 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-05 14:15:15] 2025-06-05 18:14:57,507 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 14:15:15] 2025-06-05 18:14:57,507 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 14:15:15] 2025-06-05 18:14:57,507 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 14:15:15] 2025-06-05 18:14:57,548 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 14:15:15] 2025-06-05 18:14:57,560 | INFO     | all job control threads have been joined
[2025-06-05 14:15:15] 2025-06-05 18:14:57,869 | INFO     | all data control threads have been joined
[2025-06-05 14:15:15] 2025-06-05 18:14:58,281 | INFO     | [job] retrieve thread has finished
[2025-06-05 14:15:15] 2025-06-05 18:14:58,282 | INFO     | [job] queue monitor thread has finished
[2025-06-05 14:15:15] 2025-06-05 18:14:58,282 | INFO     | [job] job monitor thread has finished
[2025-06-05 14:15:15] 2025-06-05 18:14:58,375 | INFO     | [data] copytool_in thread has finished
[2025-06-05 14:15:15] 2025-06-05 18:14:58,456 | INFO     | all payload control threads have been joined
[2025-06-05 14:15:15] 2025-06-05 18:14:58,516 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 14:15:15] 2025-06-05 18:14:58,565 | INFO     | [job] control thread has finished
[2025-06-05 14:15:15] 2025-06-05 18:14:58,875 | INFO     | [data] control thread has finished
[2025-06-05 14:15:15] 2025-06-05 18:14:59,206 | INFO     | [payload] validate_post thread has finished
[2025-06-05 14:15:15] 2025-06-05 18:14:59,387 | INFO     | [job] validate thread has finished
[2025-06-05 14:15:15] 2025-06-05 18:14:59,462 | INFO     | [payload] control thread has finished
[2025-06-05 14:15:15] 2025-06-05 18:14:59,476 | INFO     | [payload] failed_post thread has finished
[2025-06-05 14:15:15] 2025-06-05 18:14:59,554 | INFO     | [data] copytool_out thread has finished
[2025-06-05 14:15:15] 2025-06-05 18:14:59,560 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 14:15:15] 2025-06-05 18:14:59,573 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 14:15:15] 2025-06-05 18:15:00,683 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 14:15:15] 2025-06-05 18:15:04,689 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 14:15:15] 2025-06-05 18:15:07,973 | INFO     | job.realtimelogging is not enabled
[2025-06-05 14:15:15] 2025-06-05 18:15:08,978 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 14:15:15] 2025-06-05 18:15:10,408 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140515966469952)>', '<ExcThread(monitor, started 140515508983552)>']
[2025-06-05 14:15:15] 2025-06-05 18:15:10,564 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 14:15:15] 2025-06-05 18:15:10,564 | INFO     | [monitor] control thread has ended
[2025-06-05 14:15:15] 2025-06-05 18:15:15,417 | INFO     | all workflow threads have been joined
[2025-06-05 14:15:15] 2025-06-05 18:15:15,417 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 14:15:15] 2025-06-05 18:15:15,423 | INFO     | traces error code: 0
[2025-06-05 14:15:15] 2025-06-05 18:15:15,424 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 14:15:15] 2025-06-05 18:15:15,509 [wrapper] ==== pilot stdout END ====
[2025-06-05 14:15:15] 2025-06-05 18:15:15,513 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 14:15:15] 2025-06-05 18:15:15,517 [wrapper] pilotpid: 7629
[2025-06-05 14:15:15] 2025-06-05 18:15:15,521 [wrapper] Pilot exit status: 0
[2025-06-05 14:15:15] 2025-06-05 18:15:15,535 [wrapper] pandaids: 6668327082
[2025-06-05 14:15:15] 2025-06-05 18:15:15,570 [wrapper] cleanup supervisor_pilot  5894 7630
[2025-06-05 14:15:15] 2025-06-05 18:15:15,574 [wrapper] Test setup, not cleaning
[2025-06-05 14:15:15] 2025-06-05 18:15:15,578 [wrapper] apfmon messages muted
[2025-06-05 14:15:15] 2025-06-05 18:15:15,582 [wrapper] ==== wrapper stdout END ====
[2025-06-05 14:15:15] 2025-06-05 18:15:15,586 [wrapper] ==== wrapper stderr END ====
[2025-06-05 14:15:15]  *** Error codes and diagnostics ***
[2025-06-05 14:15:15]     "exeErrorCode": 0,
[2025-06-05 14:15:15]     "exeErrorDiag": "",
[2025-06-05 14:15:15]     "pilotErrorCode": 0,
[2025-06-05 14:15:15]     "pilotErrorDiag": "",
[2025-06-05 14:15:15]  *** Listing of results directory ***
[2025-06-05 14:15:15] total 428212
[2025-06-05 14:15:15] -rw-r--r-- 1 boincer umatlas    495897 May 28 06:43 pilot3.tar.gz
[2025-06-05 14:15:15] -rw-r--r-- 1 boincer umatlas      5111 May 28 06:51 queuedata.json
[2025-06-05 14:15:15] -rwx------ 1 boincer umatlas     37140 May 28 06:52 runpilot2-wrapper.sh
[2025-06-05 14:15:15] -rw-r--r-- 1 boincer umatlas       100 Jun  5 12:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 14:15:15] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 12:37 run_atlas
[2025-06-05 14:15:15] -rw-r--r-- 1 boincer umatlas       105 Jun  5 12:37 job.xml
[2025-06-05 14:15:15] -rw-r--r-- 2 boincer umatlas 224853423 Jun  5 12:37 EVNT.44871834._003246.pool.root.1
[2025-06-05 14:15:15] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 12:37 start_atlas.sh
[2025-06-05 14:15:15] drwxrwx--x 2 boincer umatlas      4096 Jun  5 12:37 shared
[2025-06-05 14:15:15] -rw-r--r-- 2 boincer umatlas    508883 Jun  5 12:37 input.tar.gz
[2025-06-05 14:15:15] -rw-r--r-- 1 boincer umatlas         0 Jun  5 12:37 boinc_lockfile
[2025-06-05 14:15:15] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 12:37 pandaJob.out
[2025-06-05 14:15:15] -rw------- 1 boincer umatlas    983229 Jun  5 12:37 agis_schedconf.cvmfs.json
[2025-06-05 14:15:15] -rw------- 1 boincer umatlas   1598969 Jun  5 12:37 agis_ddmendpoints.agis.ALL.json
[2025-06-05 14:15:15] drwx------ 4 boincer umatlas      4096 Jun  5 12:37 pilot3
[2025-06-05 14:15:15] -rw-r--r-- 1 boincer umatlas      5867 Jun  5 14:11 init_data.xml
[2025-06-05 14:15:15] -rw------- 1 boincer umatlas 207948526 Jun  5 14:14 HITS.44871837._083172.pool.root.1
[2025-06-05 14:15:15] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 14:14 boinc_mmap_file
[2025-06-05 14:15:15] -rw-r--r-- 1 boincer umatlas        27 Jun  5 14:14 wrapper_checkpoint.txt
[2025-06-05 14:15:15] -rw-r--r-- 1 boincer umatlas       529 Jun  5 14:14 boinc_task_state.xml
[2025-06-05 14:15:15] -rw------- 1 boincer umatlas      1046 Jun  5 14:14 memory_monitor_summary.json
[2025-06-05 14:15:15] -rw------- 1 boincer umatlas    386915 Jun  5 14:14 log.44871837._083172.job.log.tgz.1
[2025-06-05 14:15:15] -rw------- 1 boincer umatlas        95 Jun  5 14:14 pilot_heartbeat.json
[2025-06-05 14:15:15] -rw------- 1 boincer umatlas      7750 Jun  5 14:14 heartbeat.json
[2025-06-05 14:15:15] -rw------- 1 boincer umatlas      4741 Jun  5 14:15 pilotlog.txt
[2025-06-05 14:15:15] -rw------- 1 boincer umatlas    543166 Jun  5 14:15 log.44871837._083172.job.log.1
[2025-06-05 14:15:15] -rw------- 1 boincer umatlas       357 Jun  5 14:15 output.list
[2025-06-05 14:15:15] -rw-r--r-- 1 boincer umatlas       620 Jun  5 14:15 runtime_log
[2025-06-05 14:15:15] -rw------- 1 boincer umatlas    952320 Jun  5 14:15 result.tar.gz
[2025-06-05 14:15:15] -rw-r--r-- 1 boincer umatlas      8656 Jun  5 14:15 runtime_log.err
[2025-06-05 14:15:15] -rw------- 1 boincer umatlas       658 Jun  5 14:15 bchKDmKZTe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmRMTKDmgf0bpm.diag
[2025-06-05 14:15:15] -rw-r--r-- 1 boincer umatlas     21340 Jun  5 14:15 stderr.txt
[2025-06-05 14:15:15] HITS file was successfully produced:
[2025-06-05 14:15:15] -rw------- 1 boincer umatlas 207948526 Jun  5 14:14 shared/HITS.pool.root.1
[2025-06-05 14:15:15]  *** Contents of shared directory: ***
[2025-06-05 14:15:15] total 424108
[2025-06-05 14:15:15] -rw-r--r-- 2 boincer umatlas 224853423 Jun  5 12:37 ATLAS.root_0
[2025-06-05 14:15:15] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 12:37 start_atlas.sh
[2025-06-05 14:15:15] -rw-r--r-- 2 boincer umatlas    508883 Jun  5 12:37 input.tar.gz
[2025-06-05 14:15:15] -rw------- 1 boincer umatlas 207948526 Jun  5 14:14 HITS.pool.root.1
[2025-06-05 14:15:15] -rw------- 1 boincer umatlas    952320 Jun  5 14:15 result.tar.gz
14:15:16 (4040): run_atlas exited; CPU time 64430.209556
14:15:16 (4040): called boinc_finish(0)

</stderr_txt>
]]>

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