Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:22:47 (12831): wrapper (7.7.26015): starting
12:22:47 (12831): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 12:22:47] Arguments: --nthreads 4
[2025-06-05 12:22:47] Threads: 4
[2025-06-05 12:22:47] Checking for CVMFS
[2025-06-05 12:22:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 12:22:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 12:22:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 12:22:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 12:22:47] 2.11.2.0 2860 37357 78108 146826 3 12 12511012 20275201 1 130560 0 12463200 99.977 6930080 8279 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 12:22:47] CVMFS is ok
[2025-06-05 12:22:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 12:22:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 12:22:47] Further information can be found at the LHC@home message board.
[2025-06-05 12:22:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 12:22:47] Checking for apptainer binary...
[2025-06-05 12:22:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 12:22:47] Running /usr/bin/apptainer --version
[2025-06-05 12:22:47] apptainer version 1.3.2-1.el7
[2025-06-05 12:22:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 12:22:48] c-204-39.aglt2.org
[2025-06-05 12:22:48] apptainer works
[2025-06-05 12:22:48] Set ATHENA_PROC_NUMBER=4
[2025-06-05 12:22:48] Set ATHENA_CORE_NUMBER=4
[2025-06-05 12:22:48] Starting ATLAS job with PandaID=6668326586
[2025-06-05 12:22:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 17:26:23]  *** The last 200 lines of the pilot log: ***
[2025-06-05 17:26:23] 2025-06-05 21:26:02,029 | INFO     | total number of processed events: 400 (read)
[2025-06-05 17:26:23] 2025-06-05 21:26:02,030 | INFO     | executing command: lscpu
[2025-06-05 17:26:23] 2025-06-05 21:26:02,070 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 17:26:23] 2025-06-05 21:26:04,527 | INFO     | monitor loop #1376: job 0:6668326586 is in state 'finished'
[2025-06-05 17:26:23] 2025-06-05 21:26:04,527 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:26:23] 2025-06-05 21:26:07,031 | INFO     | monitor loop #1377: job 0:6668326586 is in state 'finished'
[2025-06-05 17:26:23] 2025-06-05 21:26:07,031 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:26:23] 2025-06-05 21:26:07,698 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 17:26:23] 2025-06-05 21:26:07,698 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668326586/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 17:26:23] 2025-06-05 21:26:07,699 | INFO     | extracted standard info from prmon json
[2025-06-05 17:26:23] 2025-06-05 21:26:07,699 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 17:26:23] 2025-06-05 21:26:07,699 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 17:26:23] 2025-06-05 21:26:07,700 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 17:26:23] 2025-06-05 21:26:07,700 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 17:26:23] 2025-06-05 21:26:07,707 | INFO     | fitting pss+swap vs Time
[2025-06-05 17:26:23] 2025-06-05 21:26:07,707 | INFO     | sum of square deviations: 8205826414.5
[2025-06-05 17:26:23] 2025-06-05 21:26:07,710 | INFO     | sum of deviations: -53393136001.499985
[2025-06-05 17:26:23] 2025-06-05 21:26:07,710 | INFO     | mean x: 1749149666.5
[2025-06-05 17:26:23] 2025-06-05 21:26:07,710 | INFO     | mean y: 2358672.2315436243
[2025-06-05 17:26:23] 2025-06-05 21:26:07,710 | INFO     | -- intersect: 11383611615.309242
[2025-06-05 17:26:23] 2025-06-05 21:26:07,710 | INFO     | intersect: 11383611615.309242
[2025-06-05 17:26:23] 2025-06-05 21:26:07,711 | INFO     | chi2: 1.6720273872226532
[2025-06-05 17:26:23] 2025-06-05 21:26:07,711 | INFO     | sum of square deviations: 7799669962.0
[2025-06-05 17:26:23] 2025-06-05 21:26:07,714 | INFO     | sum of deviations: -52572000514.0
[2025-06-05 17:26:23] 2025-06-05 21:26:07,714 | INFO     | mean x: 1749149514.0
[2025-06-05 17:26:23] 2025-06-05 21:26:07,714 | INFO     | mean y: 2358982.204778157
[2025-06-05 17:26:23] 2025-06-05 21:26:07,714 | INFO     | -- intersect: 11792125677.088278
[2025-06-05 17:26:23] 2025-06-05 21:26:07,714 | INFO     | intersect: 11792125677.088278
[2025-06-05 17:26:23] 2025-06-05 21:26:07,715 | INFO     | chi2: 1.668539321808169
[2025-06-05 17:26:23] 2025-06-05 21:26:07,715 | INFO     | current chi2=1.668539321808169 (change=0.20861293547817503 %)
[2025-06-05 17:26:23] 2025-06-05 21:26:07,715 | INFO     | right removable region: 292
[2025-06-05 17:26:23] 2025-06-05 21:26:07,715 | INFO     | sum of square deviations: 7799669962.0
[2025-06-05 17:26:23] 2025-06-05 21:26:07,718 | INFO     | sum of deviations: -90577469305.99995
[2025-06-05 17:26:23] 2025-06-05 21:26:07,718 | INFO     | mean x: 1749149819.0
[2025-06-05 17:26:23] 2025-06-05 21:26:07,718 | INFO     | mean y: 2372501.2593856654
[2025-06-05 17:26:23] 2025-06-05 21:26:07,718 | INFO     | -- intersect: 20315227380.24226
[2025-06-05 17:26:23] 2025-06-05 21:26:07,718 | INFO     | intersect: 20315227380.24226
[2025-06-05 17:26:23] 2025-06-05 21:26:07,719 | INFO     | chi2: 0.3108330550117709
[2025-06-05 17:26:23] 2025-06-05 21:26:07,719 | INFO     | current chi2=0.3108330550117709 (change=81.40981078497256 %)
[2025-06-05 17:26:23] 2025-06-05 21:26:07,719 | INFO     | sum of square deviations: 7407141672.0
[2025-06-05 17:26:23] 2025-06-05 21:26:07,722 | INFO     | sum of deviations: -86268138915.50002
[2025-06-05 17:26:23] 2025-06-05 21:26:07,722 | INFO     | mean x: 1749149971.5
[2025-06-05 17:26:23] 2025-06-05 21:26:07,722 | INFO     | mean y: 2370817.6493055555
[2025-06-05 17:26:23] 2025-06-05 21:26:07,722 | INFO     | -- intersect: 20374049854.89682
[2025-06-05 17:26:23] 2025-06-05 21:26:07,722 | INFO     | intersect: 20374049854.89682
[2025-06-05 17:26:23] 2025-06-05 21:26:07,723 | INFO     | chi2: 0.3075284490485498
[2025-06-05 17:26:23] 2025-06-05 21:26:07,723 | INFO     | current chi2=0.3075284490485498 (change=1.0631449615601316 %)
[2025-06-05 17:26:23] 2025-06-05 21:26:07,723 | INFO     | left removable region: 20
[2025-06-05 17:26:23] 2025-06-05 21:26:07,724 | INFO     | sum of square deviations: 6239923508.0
[2025-06-05 17:26:23] 2025-06-05 21:26:07,726 | INFO     | sum of deviations: -67055928689.5
[2025-06-05 17:26:23] 2025-06-05 21:26:07,726 | INFO     | mean x: 1749150093.5
[2025-06-05 17:26:23] 2025-06-05 21:26:07,726 | INFO     | mean y: 2363977.091911765
[2025-06-05 17:26:23] 2025-06-05 21:26:07,726 | INFO     | -- intersect: 18799210410.640892
[2025-06-05 17:26:23] 2025-06-05 21:26:07,726 | INFO     | intersect: 18799210410.640892
[2025-06-05 17:26:23] 2025-06-05 21:26:07,727 | INFO     | chi2: 0.28225179863778244
[2025-06-05 17:26:23] 2025-06-05 21:26:07,727 | INFO     | -- intersect: 18799210410.640892
[2025-06-05 17:26:23] 2025-06-05 21:26:07,727 | INFO     | current memory leak: -10.75 B/s (using 272 data points, chi2=0.28)
[2025-06-05 17:26:23] 2025-06-05 21:26:07,728 | INFO     | ..............................
[2025-06-05 17:26:23] 2025-06-05 21:26:07,728 | INFO     | . Timing measurements:
[2025-06-05 17:26:23] 2025-06-05 21:26:07,728 | INFO     | . get job = 0 s
[2025-06-05 17:26:23] 2025-06-05 21:26:07,728 | INFO     | . initial setup = 2 s
[2025-06-05 17:26:23] 2025-06-05 21:26:07,728 | INFO     | . payload setup = 8 s
[2025-06-05 17:26:23] 2025-06-05 21:26:07,728 | INFO     | . stage-in = 0 s
[2025-06-05 17:26:23] 2025-06-05 21:26:07,728 | INFO     | . payload execution = 18149 s
[2025-06-05 17:26:23] 2025-06-05 21:26:07,729 | INFO     | . stage-out = 2 s
[2025-06-05 17:26:23] 2025-06-05 21:26:07,729 | INFO     | . log creation = 0 s
[2025-06-05 17:26:23] 2025-06-05 21:26:07,729 | INFO     | ..............................
[2025-06-05 17:26:23] 2025-06-05 21:26:07,829 | INFO     | 
[2025-06-05 17:26:23] 2025-06-05 21:26:07,829 | INFO     | job summary report
[2025-06-05 17:26:23] 2025-06-05 21:26:07,829 | INFO     | --------------------------------------------------
[2025-06-05 17:26:23] 2025-06-05 21:26:07,829 | INFO     | PanDA job id: 6668326586
[2025-06-05 17:26:23] 2025-06-05 21:26:07,829 | INFO     | task id: 44871837
[2025-06-05 17:26:23] 2025-06-05 21:26:07,830 | INFO     | errors: (none)
[2025-06-05 17:26:23] 2025-06-05 21:26:07,830 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 17:26:23] 2025-06-05 21:26:07,830 | INFO     | pilot state: finished 
[2025-06-05 17:26:23] 2025-06-05 21:26:07,830 | INFO     | transexitcode: 0
[2025-06-05 17:26:23] 2025-06-05 21:26:07,830 | INFO     | exeerrorcode: 0
[2025-06-05 17:26:23] 2025-06-05 21:26:07,830 | INFO     | exeerrordiag: 
[2025-06-05 17:26:23] 2025-06-05 21:26:07,831 | INFO     | exitcode: 0
[2025-06-05 17:26:23] 2025-06-05 21:26:07,831 | INFO     | exitmsg: OK
[2025-06-05 17:26:23] 2025-06-05 21:26:07,831 | INFO     | cpuconsumptiontime: 70834 s
[2025-06-05 17:26:23] 2025-06-05 21:26:07,831 | INFO     | nevents: 400
[2025-06-05 17:26:23] 2025-06-05 21:26:07,831 | INFO     | neventsw: 0
[2025-06-05 17:26:23] 2025-06-05 21:26:07,832 | INFO     | pid: 23956
[2025-06-05 17:26:23] 2025-06-05 21:26:07,832 | INFO     | pgrp: 23956
[2025-06-05 17:26:23] 2025-06-05 21:26:07,832 | INFO     | corecount: 4
[2025-06-05 17:26:23] 2025-06-05 21:26:07,832 | INFO     | event service: False
[2025-06-05 17:26:23] 2025-06-05 21:26:07,832 | INFO     | sizes: {0: 2397221, 1: 2397420, 5: 2397626, 11: 2397682, 18161: 2429863, 18164: 2438804, 18166: 2438988, 18172: 2439158}
[2025-06-05 17:26:23] 2025-06-05 21:26:07,832 | INFO     | --------------------------------------------------
[2025-06-05 17:26:23] 2025-06-05 21:26:07,833 | INFO     | 
[2025-06-05 17:26:23] 2025-06-05 21:26:07,833 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 17:26:23] 2025-06-05 21:26:07,859 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 17:26:23] 2025-06-05 21:26:07,860 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 17:26:23] 2025-06-05 21:26:07,860 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 17:26:23] 2025-06-05 21:26:07,860 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 17:26:23] 2025-06-05 21:26:07,860 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 17:26:23] 2025-06-05 21:26:07,861 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 17:26:23] 2025-06-05 21:26:07,861 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 17:26:23] 2025-06-05 21:26:07,861 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 17:26:23] 2025-06-05 21:26:07,861 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 17:26:23] 2025-06-05 21:26:07,861 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 17:26:23] 2025-06-05 21:26:07,862 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 17:26:23] 2025-06-05 21:26:07,862 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 17:26:23] 2025-06-05 21:26:07,862 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 17:26:23] 2025-06-05 21:26:07,862 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 17:26:23] 2025-06-05 21:26:07,862 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 17:26:23] 2025-06-05 21:26:07,863 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 17:26:23] 2025-06-05 21:26:07,863 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 17:26:23] 2025-06-05 21:26:07,863 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 17:26:23] 2025-06-05 21:26:07,863 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 17:26:23] 2025-06-05 21:26:07,863 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 17:26:23] 2025-06-05 21:26:07,864 | INFO     | job 6668326586 has completed (purged errors)
[2025-06-05 17:26:23] 2025-06-05 21:26:07,864 | INFO     | overall cleanup function is called
[2025-06-05 17:26:23] 2025-06-05 21:26:08,872 | INFO     | --- collectZombieJob: --- 10, [23956]
[2025-06-05 17:26:23] 2025-06-05 21:26:08,872 | INFO     | zombie collector waiting for pid 23956
[2025-06-05 17:26:23] 2025-06-05 21:26:08,878 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 17:26:23] 2025-06-05 21:26:08,879 | INFO     | collected zombie processes
[2025-06-05 17:26:23] 2025-06-05 21:26:08,879 | INFO     | will attempt to kill all subprocesses of pid=23956
[2025-06-05 17:26:23] 2025-06-05 21:26:08,969 | INFO     | process IDs to be killed: [23956] (in reverse order)
[2025-06-05 17:26:23] 2025-06-05 21:26:09,026 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 17:26:23] 2025-06-05 21:26:09,026 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 17:26:23] 2025-06-05 21:26:09,030 | INFO     | did not find any defunct processes belonging to 23956
[2025-06-05 17:26:23] 2025-06-05 21:26:09,034 | INFO     | did not find any defunct processes belonging to 23956
[2025-06-05 17:26:23] 2025-06-05 21:26:09,034 | INFO     | ready for new job
[2025-06-05 17:26:23] 2025-06-05 21:26:09,035 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 17:26:23] 2025-06-05 21:26:09,037 | INFO     | **************************************
[2025-06-05 17:26:23] 2025-06-05 21:26:09,037 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 17:26:23] 2025-06-05 21:26:09,037 | INFO     | **************************************
[2025-06-05 17:26:23] 2025-06-05 21:26:09,037 | INFO     | 
[2025-06-05 17:26:23] 2025-06-05 21:26:09,038 | INFO     | architecture information:
[2025-06-05 17:26:23] 2025-06-05 21:26:09,038 | INFO     | executing command: cat /etc/os-release
[2025-06-05 17:26:23] 2025-06-05 21:26:09,058 | INFO     | cat /etc/os-release:
[2025-06-05 17:26:23] NAME="CentOS Linux"
[2025-06-05 17:26:23] VERSION="7 (Core)"
[2025-06-05 17:26:23] ID="centos"
[2025-06-05 17:26:23] ID_LIKE="rhel fedora"
[2025-06-05 17:26:23] VERSION_ID="7"
[2025-06-05 17:26:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 17:26:23] ANSI_COLOR="0;31"
[2025-06-05 17:26:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 17:26:23] HOME_URL="https://www.centos.org/"
[2025-06-05 17:26:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 17:26:23] 
[2025-06-05 17:26:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 17:26:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 17:26:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 17:26:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 17:26:23] 
[2025-06-05 17:26:23] 2025-06-05 21:26:09,058 | INFO     | **************************************
[2025-06-05 17:26:23] 2025-06-05 21:26:09,561 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 17:26:23] 2025-06-05 21:26:09,582 | INFO     | sufficient remaining disk space (18572378112 B)
[2025-06-05 17:26:23] 2025-06-05 21:26:09,583 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 17:26:23] 2025-06-05 21:26:09,583 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 17:26:23] 2025-06-05 21:26:09,583 | INFO     | update_server=False
[2025-06-05 17:26:23] 2025-06-05 21:26:09,584 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 17:26:23] 2025-06-05 21:26:09,584 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 17:26:23] 2025-06-05 21:26:09,584 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:26:23] 2025-06-05 21:26:09,585 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 17:26:23] 2025-06-05 21:26:09,585 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 17:26:23] 2025-06-05 21:26:09,585 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 17:26:23] 2025-06-05 21:26:10,147 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 17:26:23] 2025-06-05 21:26:10,200 | INFO     | all job control threads have been joined
[2025-06-05 17:26:23] 2025-06-05 21:26:10,265 | INFO     | all data control threads have been joined
[2025-06-05 17:26:23] 2025-06-05 21:26:10,539 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:26:23] 2025-06-05 21:26:10,540 | INFO     | aborting loop
[2025-06-05 17:26:23] 2025-06-05 21:26:10,589 | INFO     | [job] retrieve thread has finished
[2025-06-05 17:26:23] 2025-06-05 21:26:10,590 | INFO     | [job] queue monitor thread has finished
[2025-06-05 17:26:23] 2025-06-05 21:26:10,603 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 17:26:23] 2025-06-05 21:26:10,964 | INFO     | all payload control threads have been joined
[2025-06-05 17:26:23] 2025-06-05 21:26:11,046 | INFO     | [payload] validate_post thread has finished
[2025-06-05 17:26:23] 2025-06-05 21:26:11,206 | INFO     | [job] control thread has finished
[2025-06-05 17:26:23] 2025-06-05 21:26:11,266 | INFO     | [data] control thread has finished
[2025-06-05 17:26:23] 2025-06-05 21:26:11,522 | INFO     | [job] validate thread has finished
[2025-06-05 17:26:23] 2025-06-05 21:26:11,545 | INFO     | [job] job monitor thread has finished
[2025-06-05 17:26:23] 2025-06-05 21:26:11,658 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 17:26:23] 2025-06-05 21:26:11,759 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 17:26:23] 2025-06-05 21:26:11,825 | INFO     | [data] copytool_in thread has finished
[2025-06-05 17:26:23] 2025-06-05 21:26:11,896 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 17:26:23] 2025-06-05 21:26:11,947 | INFO     | [payload] failed_post thread has finished
[2025-06-05 17:26:23] 2025-06-05 21:26:11,969 | INFO     | [payload] control thread has finished
[2025-06-05 17:26:23] 2025-06-05 21:26:12,149 | INFO     | [data] copytool_out thread has finished
[2025-06-05 17:26:23] 2025-06-05 21:26:12,247 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 17:26:23] 2025-06-05 21:26:16,253 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 17:26:23] 2025-06-05 21:26:17,884 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140228972865344)>', '<ExcThread(monitor, started 140228224329472)>']
[2025-06-05 17:26:23] 2025-06-05 21:26:18,619 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 17:26:23] 2025-06-05 21:26:18,619 | INFO     | [monitor] control thread has ended
[2025-06-05 17:26:23] 2025-06-05 21:26:22,900 | INFO     | all workflow threads have been joined
[2025-06-05 17:26:23] 2025-06-05 21:26:22,900 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 17:26:23] 2025-06-05 21:26:22,901 | INFO     | traces error code: 0
[2025-06-05 17:26:23] 2025-06-05 21:26:22,901 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 17:26:23] 2025-06-05 21:26:23,027 [wrapper] ==== pilot stdout END ====
[2025-06-05 17:26:23] 2025-06-05 21:26:23,032 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 17:26:23] 2025-06-05 21:26:23,036 [wrapper] pilotpid: 16416
[2025-06-05 17:26:23] 2025-06-05 21:26:23,041 [wrapper] Pilot exit status: 0
[2025-06-05 17:26:23] 2025-06-05 21:26:23,060 [wrapper] pandaids: 6668326586
[2025-06-05 17:26:23] 2025-06-05 21:26:23,105 [wrapper] cleanup supervisor_pilot 18534 16417
[2025-06-05 17:26:23] 2025-06-05 21:26:23,110 [wrapper] Test setup, not cleaning
[2025-06-05 17:26:23] 2025-06-05 21:26:23,115 [wrapper] apfmon messages muted
[2025-06-05 17:26:23] 2025-06-05 21:26:23,119 [wrapper] ==== wrapper stdout END ====
[2025-06-05 17:26:23] 2025-06-05 21:26:23,123 [wrapper] ==== wrapper stderr END ====
[2025-06-05 17:26:23]  *** Error codes and diagnostics ***
[2025-06-05 17:26:23]     "exeErrorCode": 0,
[2025-06-05 17:26:23]     "exeErrorDiag": "",
[2025-06-05 17:26:23]     "pilotErrorCode": 0,
[2025-06-05 17:26:23]     "pilotErrorDiag": "",
[2025-06-05 17:26:23]  *** Listing of results directory ***
[2025-06-05 17:26:23] total 417156
[2025-06-05 17:26:23] -rw-r--r-- 1 boincer umatlas    495897 May 28 06:20 pilot3.tar.gz
[2025-06-05 17:26:23] -rw-r--r-- 1 boincer umatlas      5111 May 28 06:30 queuedata.json
[2025-06-05 17:26:23] -rwx------ 1 boincer umatlas     37140 May 28 06:31 runpilot2-wrapper.sh
[2025-06-05 17:26:23] -rw-r--r-- 1 boincer umatlas       100 Jun  5 12:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 17:26:23] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 12:22 run_atlas
[2025-06-05 17:26:23] -rw-r--r-- 1 boincer umatlas       105 Jun  5 12:22 job.xml
[2025-06-05 17:26:23] -rw-r--r-- 2 boincer umatlas 224076222 Jun  5 12:22 EVNT.44871834._003235.pool.root.1
[2025-06-05 17:26:23] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 12:22 start_atlas.sh
[2025-06-05 17:26:23] drwxrwx--x 2 boincer umatlas      4096 Jun  5 12:22 shared
[2025-06-05 17:26:23] -rw-r--r-- 2 boincer umatlas    508883 Jun  5 12:22 input.tar.gz
[2025-06-05 17:26:23] -rw-r--r-- 1 boincer umatlas         0 Jun  5 12:22 boinc_lockfile
[2025-06-05 17:26:23] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 12:22 pandaJob.out
[2025-06-05 17:26:23] -rw------- 1 boincer umatlas    983229 Jun  5 12:22 agis_schedconf.cvmfs.json
[2025-06-05 17:26:23] drwx------ 4 boincer umatlas      4096 Jun  5 12:23 pilot3
[2025-06-05 17:26:23] -rw-r--r-- 1 boincer umatlas      5906 Jun  5 17:21 init_data.xml
[2025-06-05 17:26:23] -rw------- 1 boincer umatlas        95 Jun  5 17:25 pilot_heartbeat.json
[2025-06-05 17:26:23] -rw------- 1 boincer umatlas 195249974 Jun  5 17:25 HITS.44871837._082895.pool.root.1
[2025-06-05 17:26:23] -rw-r--r-- 1 boincer umatlas       530 Jun  5 17:25 boinc_task_state.xml
[2025-06-05 17:26:23] -rw------- 1 boincer umatlas      1057 Jun  5 17:25 memory_monitor_summary.json
[2025-06-05 17:26:23] -rw------- 1 boincer umatlas   1598969 Jun  5 17:25 agis_ddmendpoints.agis.ALL.json
[2025-06-05 17:26:23] -rw------- 1 boincer umatlas    380072 Jun  5 17:25 log.44871837._082895.job.log.tgz.1
[2025-06-05 17:26:23] -rw------- 1 boincer umatlas      7756 Jun  5 17:26 heartbeat.json
[2025-06-05 17:26:23] -rw-r--r-- 1 boincer umatlas        28 Jun  5 17:26 wrapper_checkpoint.txt
[2025-06-05 17:26:23] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 17:26 boinc_mmap_file
[2025-06-05 17:26:23] -rw------- 1 boincer umatlas      4476 Jun  5 17:26 pilotlog.txt
[2025-06-05 17:26:23] -rw------- 1 boincer umatlas   1623248 Jun  5 17:26 log.44871837._082895.job.log.1
[2025-06-05 17:26:23] -rw------- 1 boincer umatlas       357 Jun  5 17:26 output.list
[2025-06-05 17:26:23] -rw-r--r-- 1 boincer umatlas       620 Jun  5 17:26 runtime_log
[2025-06-05 17:26:23] -rw------- 1 boincer umatlas   2027520 Jun  5 17:26 result.tar.gz
[2025-06-05 17:26:23] -rw------- 1 boincer umatlas       664 Jun  5 17:26 zyTNDmEFTe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmgKTKDmCVW7gm.diag
[2025-06-05 17:26:23] -rw-r--r-- 1 boincer umatlas      8660 Jun  5 17:26 runtime_log.err
[2025-06-05 17:26:23] -rw-r--r-- 1 boincer umatlas     21116 Jun  5 17:26 stderr.txt
[2025-06-05 17:26:23] HITS file was successfully produced:
[2025-06-05 17:26:23] -rw------- 1 boincer umatlas 195249974 Jun  5 17:25 shared/HITS.pool.root.1
[2025-06-05 17:26:23]  *** Contents of shared directory: ***
[2025-06-05 17:26:23] total 412004
[2025-06-05 17:26:23] -rw-r--r-- 2 boincer umatlas 224076222 Jun  5 12:22 ATLAS.root_0
[2025-06-05 17:26:23] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 12:22 start_atlas.sh
[2025-06-05 17:26:23] -rw-r--r-- 2 boincer umatlas    508883 Jun  5 12:22 input.tar.gz
[2025-06-05 17:26:23] -rw------- 1 boincer umatlas 195249974 Jun  5 17:25 HITS.pool.root.1
[2025-06-05 17:26:23] -rw------- 1 boincer umatlas   2027520 Jun  5 17:26 result.tar.gz
17:26:25 (12831): run_atlas exited; CPU time 70234.806711
17:26:25 (12831): called boinc_finish(0)

</stderr_txt>
]]>

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