Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:52:40 (2471225): wrapper (7.7.26015): starting
12:52:40 (2471225): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 12:52:40] Arguments: --nthreads 12
[2025-06-05 12:52:40] Threads: 12
[2025-06-05 12:52:40] Checking for CVMFS
[2025-06-05 12:52:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 12:52:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 12:52:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 12:52:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 12:52:40] 2.12.6.0 3144709 1472 141664 146826 3 555 15373970 40960000 9751 16776704 0 2597505 99.099 4222309 18674 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 12:52:40] CVMFS is ok
[2025-06-05 12:52:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 12:52:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 12:52:40] Further information can be found at the LHC@home message board.
[2025-06-05 12:52:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 12:52:40] Checking for apptainer binary...
[2025-06-05 12:52:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 12:52:40] Running /usr/bin/apptainer --version
[2025-06-05 12:52:40] apptainer version 1.4.1-1.el9
[2025-06-05 12:52:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 12:52:40] c6-5-7-4.aglt2.org
[2025-06-05 12:52:40] apptainer works
[2025-06-05 12:52:40] Set ATHENA_PROC_NUMBER=12
[2025-06-05 12:52:40] Set ATHENA_CORE_NUMBER=12
[2025-06-05 12:52:40] Starting ATLAS job with PandaID=6669090076
[2025-06-05 12:52:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 15:34:29]  *** The last 200 lines of the pilot log: ***
[2025-06-05 15:34:29] 2025-06-05 19:34:06,718 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 15:34:29] 2025-06-05 19:34:09,223 | INFO     | monitor loop #635: job 0:6669090076 is in state 'finished'
[2025-06-05 15:34:29] 2025-06-05 19:34:09,223 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 15:34:29] 2025-06-05 19:34:10,182 | INFO     | 9683s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 15:34:29] 2025-06-05 19:34:11,728 | INFO     | monitor loop #636: job 0:6669090076 is in state 'finished'
[2025-06-05 15:34:29] 2025-06-05 19:34:11,728 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 15:34:29] 2025-06-05 19:34:14,233 | INFO     | monitor loop #637: job 0:6669090076 is in state 'finished'
[2025-06-05 15:34:29] 2025-06-05 19:34:14,233 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 15:34:29] 2025-06-05 19:34:15,878 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 15:34:29] 2025-06-05 19:34:15,878 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669090076/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 15:34:29] 2025-06-05 19:34:15,879 | INFO     | extracted standard info from prmon json
[2025-06-05 15:34:29] 2025-06-05 19:34:15,879 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 15:34:29] 2025-06-05 19:34:15,880 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 15:34:29] 2025-06-05 19:34:15,884 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 15:34:29] 2025-06-05 19:34:15,884 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 15:34:29] 2025-06-05 19:34:15,887 | INFO     | fitting pss+swap vs Time
[2025-06-05 15:34:29] 2025-06-05 19:34:15,888 | INFO     | sum of square deviations: 1223004989.9303827
[2025-06-05 15:34:29] 2025-06-05 19:34:15,888 | INFO     | sum of deviations: 2954805638.9746842
[2025-06-05 15:34:29] 2025-06-05 19:34:15,889 | INFO     | mean x: 1749147183.9177215
[2025-06-05 15:34:29] 2025-06-05 19:34:15,889 | INFO     | mean y: 2374262.1518987343
[2025-06-05 15:34:29] 2025-06-05 19:34:15,889 | INFO     | -- intersect: -4223601923.547044
[2025-06-05 15:34:29] 2025-06-05 19:34:15,889 | INFO     | intersect: -4223601923.547044
[2025-06-05 15:34:29] 2025-06-05 19:34:15,889 | INFO     | chi2: 1.7297955319152665
[2025-06-05 15:34:29] 2025-06-05 19:34:15,889 | INFO     | sum of square deviations: 1110548591.5294125
[2025-06-05 15:34:29] 2025-06-05 19:34:15,890 | INFO     | sum of deviations: 5610954741.450987
[2025-06-05 15:34:29] 2025-06-05 19:34:15,890 | INFO     | mean x: 1749147031.4313726
[2025-06-05 15:34:29] 2025-06-05 19:34:15,890 | INFO     | mean y: 2377836.2810457516
[2025-06-05 15:34:29] 2025-06-05 19:34:15,891 | INFO     | -- intersect: -8835042610.120779
[2025-06-05 15:34:29] 2025-06-05 19:34:15,891 | INFO     | intersect: -8835042610.120779
[2025-06-05 15:34:29] 2025-06-05 19:34:15,891 | INFO     | chi2: 1.7221856576071013
[2025-06-05 15:34:29] 2025-06-05 19:34:15,891 | INFO     | current chi2=1.7221856576071013 (change=0.43992912270615947 %)
[2025-06-05 15:34:29] 2025-06-05 19:34:15,891 | INFO     | right removable region: 152
[2025-06-05 15:34:29] 2025-06-05 19:34:15,891 | INFO     | sum of square deviations: 1110508331.5294125
[2025-06-05 15:34:29] 2025-06-05 19:34:15,892 | INFO     | sum of deviations: -19667369608.90196
[2025-06-05 15:34:29] 2025-06-05 19:34:15,892 | INFO     | mean x: 1749147336.4313726
[2025-06-05 15:34:29] 2025-06-05 19:34:15,892 | INFO     | mean y: 2404509.77124183
[2025-06-05 15:34:29] 2025-06-05 19:34:15,892 | INFO     | -- intersect: 30980224476.816708
[2025-06-05 15:34:29] 2025-06-05 19:34:15,892 | INFO     | intersect: 30980224476.816708
[2025-06-05 15:34:29] 2025-06-05 19:34:15,893 | INFO     | chi2: 0.28840193933483743
[2025-06-05 15:34:29] 2025-06-05 19:34:15,893 | INFO     | current chi2=0.28840193933483743 (change=83.32739713950397 %)
[2025-06-05 15:34:29] 2025-06-05 19:34:15,893 | INFO     | sum of square deviations: 1005146385.3243217
[2025-06-05 15:34:29] 2025-06-05 19:34:15,894 | INFO     | sum of deviations: -18898797129.445946
[2025-06-05 15:34:29] 2025-06-05 19:34:15,894 | INFO     | mean x: 1749147488.9324324
[2025-06-05 15:34:29] 2025-06-05 19:34:15,894 | INFO     | mean y: 2403268.1554054054
[2025-06-05 15:34:29] 2025-06-05 19:34:15,894 | INFO     | -- intersect: 32889934900.821728
[2025-06-05 15:34:29] 2025-06-05 19:34:15,894 | INFO     | intersect: 32889934900.821728
[2025-06-05 15:34:29] 2025-06-05 19:34:15,894 | INFO     | chi2: 0.25017174935981157
[2025-06-05 15:34:29] 2025-06-05 19:34:15,894 | INFO     | current chi2=0.25017174935981157 (change=13.255871324304877 %)
[2025-06-05 15:34:29] 2025-06-05 19:34:15,894 | INFO     | left removable region: 20
[2025-06-05 15:34:29] 2025-06-05 19:34:15,894 | INFO     | sum of square deviations: 713125839.7272751
[2025-06-05 15:34:29] 2025-06-05 19:34:15,895 | INFO     | sum of deviations: -1672012748.181819
[2025-06-05 15:34:29] 2025-06-05 19:34:15,895 | INFO     | mean x: 1749147610.9545455
[2025-06-05 15:34:29] 2025-06-05 19:34:15,895 | INFO     | mean y: 2383790.6363636362
[2025-06-05 15:34:29] 2025-06-05 19:34:15,895 | INFO     | -- intersect: 4103479194.900839
[2025-06-05 15:34:29] 2025-06-05 19:34:15,895 | INFO     | intersect: 4103479194.900839
[2025-06-05 15:34:29] 2025-06-05 19:34:15,896 | INFO     | chi2: 0.10525656866073951
[2025-06-05 15:34:29] 2025-06-05 19:34:15,896 | INFO     | -- intersect: 4103479194.900839
[2025-06-05 15:34:29] 2025-06-05 19:34:15,896 | INFO     | current memory leak: -2.34 B/s (using 132 data points, chi2=0.11)
[2025-06-05 15:34:29] 2025-06-05 19:34:15,896 | INFO     | ..............................
[2025-06-05 15:34:29] 2025-06-05 19:34:15,897 | INFO     | . Timing measurements:
[2025-06-05 15:34:29] 2025-06-05 19:34:15,897 | INFO     | . get job = 0 s
[2025-06-05 15:34:29] 2025-06-05 19:34:15,897 | INFO     | . initial setup = 2 s
[2025-06-05 15:34:29] 2025-06-05 19:34:15,897 | INFO     | . payload setup = 6 s
[2025-06-05 15:34:29] 2025-06-05 19:34:15,897 | INFO     | . stage-in = 0 s
[2025-06-05 15:34:29] 2025-06-05 19:34:15,897 | INFO     | . payload execution = 9641 s
[2025-06-05 15:34:29] 2025-06-05 19:34:15,897 | INFO     | . stage-out = 1 s
[2025-06-05 15:34:29] 2025-06-05 19:34:15,897 | INFO     | . log creation = 0 s
[2025-06-05 15:34:29] 2025-06-05 19:34:15,897 | INFO     | ..............................
[2025-06-05 15:34:29] 2025-06-05 19:34:16,033 | INFO     | 
[2025-06-05 15:34:29] 2025-06-05 19:34:16,033 | INFO     | job summary report
[2025-06-05 15:34:29] 2025-06-05 19:34:16,033 | INFO     | --------------------------------------------------
[2025-06-05 15:34:29] 2025-06-05 19:34:16,033 | INFO     | PanDA job id: 6669090076
[2025-06-05 15:34:29] 2025-06-05 19:34:16,033 | INFO     | task id: 44871837
[2025-06-05 15:34:29] 2025-06-05 19:34:16,033 | INFO     | errors: (none)
[2025-06-05 15:34:29] 2025-06-05 19:34:16,033 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 15:34:29] 2025-06-05 19:34:16,034 | INFO     | pilot state: finished 
[2025-06-05 15:34:29] 2025-06-05 19:34:16,034 | INFO     | transexitcode: 0
[2025-06-05 15:34:29] 2025-06-05 19:34:16,034 | INFO     | exeerrorcode: 0
[2025-06-05 15:34:29] 2025-06-05 19:34:16,034 | INFO     | exeerrordiag: 
[2025-06-05 15:34:29] 2025-06-05 19:34:16,034 | INFO     | exitcode: 0
[2025-06-05 15:34:29] 2025-06-05 19:34:16,034 | INFO     | exitmsg: OK
[2025-06-05 15:34:29] 2025-06-05 19:34:16,034 | INFO     | cpuconsumptiontime: 48715 s
[2025-06-05 15:34:29] 2025-06-05 19:34:16,034 | INFO     | nevents: 400
[2025-06-05 15:34:29] 2025-06-05 19:34:16,034 | INFO     | neventsw: 0
[2025-06-05 15:34:29] 2025-06-05 19:34:16,034 | INFO     | pid: 2482041
[2025-06-05 15:34:29] 2025-06-05 19:34:16,034 | INFO     | pgrp: 2482041
[2025-06-05 15:34:29] 2025-06-05 19:34:16,034 | INFO     | corecount: 12
[2025-06-05 15:34:29] 2025-06-05 19:34:16,034 | INFO     | event service: False
[2025-06-05 15:34:29] 2025-06-05 19:34:16,034 | INFO     | sizes: {0: 2397391, 4: 2397597, 11: 2397625, 9651: 2426002, 9653: 2434999, 9671: 2435113}
[2025-06-05 15:34:29] 2025-06-05 19:34:16,034 | INFO     | --------------------------------------------------
[2025-06-05 15:34:29] 2025-06-05 19:34:16,034 | INFO     | 
[2025-06-05 15:34:29] 2025-06-05 19:34:16,035 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 15:34:29] 2025-06-05 19:34:16,271 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 15:34:29] 2025-06-05 19:34:16,271 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 15:34:29] 2025-06-05 19:34:16,271 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 15:34:29] 2025-06-05 19:34:16,272 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 15:34:29] 2025-06-05 19:34:16,272 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 15:34:29] 2025-06-05 19:34:16,272 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 15:34:29] 2025-06-05 19:34:16,272 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 15:34:29] 2025-06-05 19:34:16,272 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 15:34:29] 2025-06-05 19:34:16,272 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 15:34:29] 2025-06-05 19:34:16,272 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 15:34:29] 2025-06-05 19:34:16,272 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 15:34:29] 2025-06-05 19:34:16,272 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 15:34:29] 2025-06-05 19:34:16,272 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 15:34:29] 2025-06-05 19:34:16,272 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 15:34:29] 2025-06-05 19:34:16,272 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 15:34:29] 2025-06-05 19:34:16,272 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 15:34:29] 2025-06-05 19:34:16,272 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 15:34:29] 2025-06-05 19:34:16,272 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 15:34:29] 2025-06-05 19:34:16,273 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 15:34:29] 2025-06-05 19:34:16,273 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 15:34:29] 2025-06-05 19:34:16,273 | INFO     | job 6669090076 has completed (purged errors)
[2025-06-05 15:34:29] 2025-06-05 19:34:16,273 | INFO     | overall cleanup function is called
[2025-06-05 15:34:29] 2025-06-05 19:34:17,291 | INFO     | --- collectZombieJob: --- 10, [2482041]
[2025-06-05 15:34:29] 2025-06-05 19:34:17,291 | INFO     | zombie collector waiting for pid 2482041
[2025-06-05 15:34:29] 2025-06-05 19:34:17,291 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 15:34:29] 2025-06-05 19:34:17,291 | INFO     | collected zombie processes
[2025-06-05 15:34:29] 2025-06-05 19:34:17,291 | INFO     | will attempt to kill all subprocesses of pid=2482041
[2025-06-05 15:34:29] 2025-06-05 19:34:17,726 | INFO     | process IDs to be killed: [2482041] (in reverse order)
[2025-06-05 15:34:29] 2025-06-05 19:34:17,817 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 15:34:29] 2025-06-05 19:34:17,818 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 15:34:29] 2025-06-05 19:34:17,834 | INFO     | did not find any defunct processes belonging to 2482041
[2025-06-05 15:34:29] 2025-06-05 19:34:17,853 | INFO     | did not find any defunct processes belonging to 2482041
[2025-06-05 15:34:29] 2025-06-05 19:34:17,854 | INFO     | ready for new job
[2025-06-05 15:34:29] 2025-06-05 19:34:17,854 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 15:34:29] 2025-06-05 19:34:17,856 | INFO     | **************************************
[2025-06-05 15:34:29] 2025-06-05 19:34:17,856 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 15:34:29] 2025-06-05 19:34:17,856 | INFO     | **************************************
[2025-06-05 15:34:29] 2025-06-05 19:34:17,856 | INFO     | 
[2025-06-05 15:34:29] 2025-06-05 19:34:17,872 | INFO     | architecture information:
[2025-06-05 15:34:29] 2025-06-05 19:34:17,879 | INFO     | executing command: cat /etc/os-release
[2025-06-05 15:34:29] 2025-06-05 19:34:17,900 | INFO     | cat /etc/os-release:
[2025-06-05 15:34:29] NAME="CentOS Linux"
[2025-06-05 15:34:29] VERSION="7 (Core)"
[2025-06-05 15:34:29] ID="centos"
[2025-06-05 15:34:29] ID_LIKE="rhel fedora"
[2025-06-05 15:34:29] VERSION_ID="7"
[2025-06-05 15:34:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 15:34:29] ANSI_COLOR="0;31"
[2025-06-05 15:34:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 15:34:29] HOME_URL="https://www.centos.org/"
[2025-06-05 15:34:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 15:34:29] 
[2025-06-05 15:34:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 15:34:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 15:34:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 15:34:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 15:34:29] 
[2025-06-05 15:34:29] 2025-06-05 19:34:17,901 | INFO     | **************************************
[2025-06-05 15:34:29] 2025-06-05 19:34:18,404 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 15:34:29] 2025-06-05 19:34:18,540 | INFO     | sufficient remaining disk space (75531026432 B)
[2025-06-05 15:34:29] 2025-06-05 19:34:18,540 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 15:34:29] 2025-06-05 19:34:18,540 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 15:34:29] 2025-06-05 19:34:18,540 | INFO     | update_server=False
[2025-06-05 15:34:29] 2025-06-05 19:34:18,540 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 15:34:29] 2025-06-05 19:34:18,541 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:34:29] 2025-06-05 19:34:18,541 | INFO     | aborting loop
[2025-06-05 15:34:29] 2025-06-05 19:34:18,545 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 15:34:29] 2025-06-05 19:34:18,612 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 15:34:29] 2025-06-05 19:34:18,966 | INFO     | all payload control threads have been joined
[2025-06-05 15:34:29] 2025-06-05 19:34:18,987 | INFO     | all job control threads have been joined
[2025-06-05 15:34:29] 2025-06-05 19:34:19,216 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 15:34:29] 2025-06-05 19:34:19,216 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 15:34:29] 2025-06-05 19:34:19,216 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 15:34:29] 2025-06-05 19:34:19,430 | INFO     | all data control threads have been joined
[2025-06-05 15:34:29] 2025-06-05 19:34:19,550 | INFO     | [job] retrieve thread has finished
[2025-06-05 15:34:29] 2025-06-05 19:34:19,551 | INFO     | [job] job monitor thread has finished
[2025-06-05 15:34:29] 2025-06-05 19:34:19,567 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 15:34:29] 2025-06-05 19:34:19,599 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 15:34:29] 2025-06-05 19:34:19,661 | INFO     | [payload] validate_post thread has finished
[2025-06-05 15:34:29] 2025-06-05 19:34:19,972 | INFO     | [payload] control thread has finished
[2025-06-05 15:34:29] 2025-06-05 19:34:19,993 | INFO     | [job] control thread has finished
[2025-06-05 15:34:29] 2025-06-05 19:34:20,243 | INFO     | [job] validate thread has finished
[2025-06-05 15:34:29] 2025-06-05 19:34:20,346 | INFO     | [payload] failed_post thread has finished
[2025-06-05 15:34:29] 2025-06-05 19:34:20,352 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 15:34:29] 2025-06-05 19:34:20,437 | INFO     | [data] control thread has finished
[2025-06-05 15:34:29] 2025-06-05 19:34:20,513 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 15:34:29] 2025-06-05 19:34:20,618 | INFO     | [data] copytool_out thread has finished
[2025-06-05 15:34:29] 2025-06-05 19:34:20,879 | INFO     | [data] copytool_in thread has finished
[2025-06-05 15:34:29] 2025-06-05 19:34:21,047 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:34:29] 2025-06-05 19:34:22,053 | INFO     | [job] queue monitor thread has finished
[2025-06-05 15:34:29] 2025-06-05 19:34:22,554 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 15:34:29] 2025-06-05 19:34:23,056 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140687959140160)>', '<ExcThread(monitor, started 140687467071232)>']
[2025-06-05 15:34:29] 2025-06-05 19:34:23,239 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 15:34:29] 2025-06-05 19:34:23,239 | INFO     | [monitor] control thread has ended
[2025-06-05 15:34:29] 2025-06-05 19:34:28,082 | INFO     | all workflow threads have been joined
[2025-06-05 15:34:29] 2025-06-05 19:34:28,082 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 15:34:29] 2025-06-05 19:34:28,082 | INFO     | traces error code: 0
[2025-06-05 15:34:29] 2025-06-05 19:34:28,083 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 15:34:29] 2025-06-05 19:34:28,298 [wrapper] ==== pilot stdout END ====
[2025-06-05 15:34:29] 2025-06-05 19:34:28,317 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 15:34:29] 2025-06-05 19:34:28,334 [wrapper] pilotpid: 2475332
[2025-06-05 15:34:29] 2025-06-05 19:34:28,346 [wrapper] Pilot exit status: 0
[2025-06-05 15:34:29] 2025-06-05 19:34:28,392 [wrapper] pandaids: 6669090076
[2025-06-05 15:34:29] 2025-06-05 19:34:28,447 [wrapper] cleanup supervisor_pilot 2714165 2475333
[2025-06-05 15:34:29] 2025-06-05 19:34:28,478 [wrapper] Test setup, not cleaning
[2025-06-05 15:34:29] 2025-06-05 19:34:28,512 [wrapper] apfmon messages muted
[2025-06-05 15:34:29] 2025-06-05 19:34:28,527 [wrapper] ==== wrapper stdout END ====
[2025-06-05 15:34:29] 2025-06-05 19:34:28,548 [wrapper] ==== wrapper stderr END ====
[2025-06-05 15:34:29]  *** Error codes and diagnostics ***
[2025-06-05 15:34:29]     "exeErrorCode": 0,
[2025-06-05 15:34:29]     "exeErrorDiag": "",
[2025-06-05 15:34:29]     "pilotErrorCode": 0,
[2025-06-05 15:34:29]     "pilotErrorDiag": "",
[2025-06-05 15:34:29]  *** Listing of results directory ***
[2025-06-05 15:34:29] total 417860
[2025-06-05 15:34:29] -rwx------. 1 boincer umatlas     37140 May 28 21:34 runpilot2-wrapper.sh
[2025-06-05 15:34:29] -rw-r--r--. 1 boincer umatlas      5111 May 28 21:34 queuedata.json
[2025-06-05 15:34:29] -rw-r--r--. 1 boincer umatlas    495897 May 28 21:34 pilot3.tar.gz
[2025-06-05 15:34:29] -rw-r--r--. 1 boincer umatlas       100 Jun  5 12:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 15:34:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 12:52 run_atlas
[2025-06-05 15:34:29] -rw-r--r--. 1 boincer umatlas       105 Jun  5 12:52 job.xml
[2025-06-05 15:34:29] -rw-r--r--. 2 boincer umatlas 222895025 Jun  5 12:52 EVNT.44871834._003625.pool.root.1
[2025-06-05 15:34:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 12:52 start_atlas.sh
[2025-06-05 15:34:29] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 12:52 shared
[2025-06-05 15:34:29] -rw-r--r--. 2 boincer umatlas    508870 Jun  5 12:52 input.tar.gz
[2025-06-05 15:34:29] -rw-r--r--. 1 boincer umatlas         0 Jun  5 12:52 boinc_lockfile
[2025-06-05 15:34:29] -rw-r--r--. 1 boincer umatlas      2558 Jun  5 12:52 pandaJob.out
[2025-06-05 15:34:29] -rw-------. 1 boincer umatlas    983229 Jun  5 12:52 agis_schedconf.cvmfs.json
[2025-06-05 15:34:29] -rw-------. 1 boincer umatlas   1598969 Jun  5 12:52 agis_ddmendpoints.agis.ALL.json
[2025-06-05 15:34:29] drwx------. 4 boincer umatlas      4096 Jun  5 12:52 pilot3
[2025-06-05 15:34:29] -rw-r--r--. 1 boincer umatlas      6840 Jun  5 15:31 init_data.xml
[2025-06-05 15:34:29] -rw-------. 1 boincer umatlas 198661295 Jun  5 15:33 HITS.44871837._093225.pool.root.1
[2025-06-05 15:34:29] -rw-r--r--. 1 boincer umatlas       530 Jun  5 15:33 boinc_task_state.xml
[2025-06-05 15:34:29] -rw-------. 1 boincer umatlas      1040 Jun  5 15:33 memory_monitor_summary.json
[2025-06-05 15:34:29] -rw-------. 1 boincer umatlas        95 Jun  5 15:33 pilot_heartbeat.json
[2025-06-05 15:34:29] -rw-------. 1 boincer umatlas    407124 Jun  5 15:33 log.44871837._093225.job.log.tgz.1
[2025-06-05 15:34:29] -rw-------. 1 boincer umatlas      7714 Jun  5 15:34 heartbeat.json
[2025-06-05 15:34:29] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 15:34 boinc_mmap_file
[2025-06-05 15:34:29] -rw-r--r--. 1 boincer umatlas        27 Jun  5 15:34 wrapper_checkpoint.txt
[2025-06-05 15:34:29] -rw-------. 1 boincer umatlas      4353 Jun  5 15:34 pilotlog.txt
[2025-06-05 15:34:29] -rw-------. 1 boincer umatlas    846310 Jun  5 15:34 log.44871837._093225.job.log.1
[2025-06-05 15:34:29] -rw-------. 1 boincer umatlas       357 Jun  5 15:34 output.list
[2025-06-05 15:34:29] -rw-r--r--. 1 boincer umatlas       620 Jun  5 15:34 runtime_log
[2025-06-05 15:34:29] -rw-------. 1 boincer umatlas   1269760 Jun  5 15:34 result.tar.gz
[2025-06-05 15:34:29] -rw-r--r--. 1 boincer umatlas      8661 Jun  5 15:34 runtime_log.err
[2025-06-05 15:34:29] -rw-------. 1 boincer umatlas       654 Jun  5 15:34 F47MDmzKhe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmLPUKDmzqDQGo.diag
[2025-06-05 15:34:29] -rw-r--r--. 1 boincer umatlas     21172 Jun  5 15:34 stderr.txt
[2025-06-05 15:34:29] HITS file was successfully produced:
[2025-06-05 15:34:29] -rw-------. 1 boincer umatlas 198661295 Jun  5 15:33 shared/HITS.pool.root.1
[2025-06-05 15:34:29]  *** Contents of shared directory: ***
[2025-06-05 15:34:29] total 413440
[2025-06-05 15:34:29] -rw-r--r--. 2 boincer umatlas 222895025 Jun  5 12:52 ATLAS.root_0
[2025-06-05 15:34:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 12:52 start_atlas.sh
[2025-06-05 15:34:29] -rw-r--r--. 2 boincer umatlas    508870 Jun  5 12:52 input.tar.gz
[2025-06-05 15:34:29] -rw-------. 1 boincer umatlas 198661295 Jun  5 15:33 HITS.pool.root.1
[2025-06-05 15:34:29] -rw-------. 1 boincer umatlas   1269760 Jun  5 15:34 result.tar.gz
15:34:31 (2471225): run_atlas exited; CPU time 48891.298071
15:34:31 (2471225): called boinc_finish(0)

</stderr_txt>
]]>

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