Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:00:51 (3225322): wrapper (7.7.26015): starting
13:00:51 (3225322): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 13:00:51] Arguments: --nthreads 12
[2025-06-05 13:00:51] Threads: 12
[2025-06-05 13:00:51] Checking for CVMFS
[2025-06-05 13:00:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 13:00:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 13:00:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 13:00:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 13:00:51] 2.12.6.0 4996 2463 112120 146826 3 391 31785519 32935937 11405 16776704 0 4969098 99.737 4071356 32567 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 13:00:51] CVMFS is ok
[2025-06-05 13:00:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 13:00:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 13:00:51] Further information can be found at the LHC@home message board.
[2025-06-05 13:00:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 13:00:51] Checking for apptainer binary...
[2025-06-05 13:00:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 13:00:51] Running /usr/bin/apptainer --version
[2025-06-05 13:00:51] apptainer version 1.4.1-1.el9
[2025-06-05 13:00:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:00:51] c6-5-7-3.aglt2.org
[2025-06-05 13:00:51] apptainer works
[2025-06-05 13:00:51] Set ATHENA_PROC_NUMBER=12
[2025-06-05 13:00:51] Set ATHENA_CORE_NUMBER=12
[2025-06-05 13:00:51] Starting ATLAS job with PandaID=6668980485
[2025-06-05 13:00:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 16:01:19]  *** The last 200 lines of the pilot log: ***
[2025-06-05 16:01:19] 2025-06-05 20:01:04,151 | INFO     | -- intersect: -280444721.1223574
[2025-06-05 16:01:19] 2025-06-05 20:01:04,151 | INFO     | intersect: -280444721.1223574
[2025-06-05 16:01:19] 2025-06-05 20:01:04,151 | INFO     | chi2: 2.4017926309942164
[2025-06-05 16:01:19] 2025-06-05 20:01:04,151 | INFO     | sum of square deviations: 1577853316.8604608
[2025-06-05 16:01:19] 2025-06-05 20:01:04,152 | INFO     | sum of deviations: 11787355508.441864
[2025-06-05 16:01:19] 2025-06-05 20:01:04,152 | INFO     | mean x: 1749148103.9186046
[2025-06-05 16:01:19] 2025-06-05 20:01:04,152 | INFO     | mean y: 2346764.6744186045
[2025-06-05 16:01:19] 2025-06-05 20:01:04,152 | INFO     | -- intersect: -13064666700.70271
[2025-06-05 16:01:19] 2025-06-05 20:01:04,152 | INFO     | intersect: -13064666700.70271
[2025-06-05 16:01:19] 2025-06-05 20:01:04,153 | INFO     | chi2: 1.5854602293860067
[2025-06-05 16:01:19] 2025-06-05 20:01:04,153 | INFO     | current chi2=1.5854602293860067 (change=33.988463078525264 %)
[2025-06-05 16:01:19] 2025-06-05 20:01:04,153 | INFO     | sum of square deviations: 1444214942.6586778
[2025-06-05 16:01:19] 2025-06-05 20:01:04,154 | INFO     | sum of deviations: 11058062560.01796
[2025-06-05 16:01:19] 2025-06-05 20:01:04,154 | INFO     | mean x: 1749147951.4191616
[2025-06-05 16:01:19] 2025-06-05 20:01:04,154 | INFO     | mean y: 2345924.5568862273
[2025-06-05 16:01:19] 2025-06-05 20:01:04,154 | INFO     | -- intersect: -13390527187.469643
[2025-06-05 16:01:19] 2025-06-05 20:01:04,154 | INFO     | intersect: -13390527187.469643
[2025-06-05 16:01:19] 2025-06-05 20:01:04,154 | INFO     | chi2: 1.5855554281076687
[2025-06-05 16:01:19] 2025-06-05 20:01:04,154 | INFO     | current chi2=1.5855554281076687 (change=-0.006004485000474474 %)
[2025-06-05 16:01:19] 2025-06-05 20:01:04,154 | INFO     | right removable region: 166
[2025-06-05 16:01:19] 2025-06-05 20:01:04,155 | INFO     | sum of square deviations: 1577809396.8604608
[2025-06-05 16:01:19] 2025-06-05 20:01:04,155 | INFO     | sum of deviations: -24044781660.70929
[2025-06-05 16:01:19] 2025-06-05 20:01:04,156 | INFO     | mean x: 1749148408.9186046
[2025-06-05 16:01:19] 2025-06-05 20:01:04,156 | INFO     | mean y: 2360520.3779069767
[2025-06-05 16:01:19] 2025-06-05 20:01:04,156 | INFO     | -- intersect: 26658236488.864384
[2025-06-05 16:01:19] 2025-06-05 20:01:04,156 | INFO     | intersect: 26658236488.864384
[2025-06-05 16:01:19] 2025-06-05 20:01:04,156 | INFO     | chi2: 1.0541022052820217
[2025-06-05 16:01:19] 2025-06-05 20:01:04,156 | INFO     | current chi2=1.0541022052820217 (change=56.11185613282198 %)
[2025-06-05 16:01:19] 2025-06-05 20:01:04,156 | INFO     | sum of square deviations: 1444147720.9580853
[2025-06-05 16:01:19] 2025-06-05 20:01:04,157 | INFO     | sum of deviations: -16794509821.55688
[2025-06-05 16:01:19] 2025-06-05 20:01:04,157 | INFO     | mean x: 1749148561.4311378
[2025-06-05 16:01:19] 2025-06-05 20:01:04,157 | INFO     | mean y: 2352214.2994011976
[2025-06-05 16:01:19] 2025-06-05 20:01:04,157 | INFO     | -- intersect: 20343825782.410885
[2025-06-05 16:01:19] 2025-06-05 20:01:04,157 | INFO     | intersect: 20343825782.410885
[2025-06-05 16:01:19] 2025-06-05 20:01:04,158 | INFO     | chi2: 1.006097938445669
[2025-06-05 16:01:19] 2025-06-05 20:01:04,158 | INFO     | current chi2=1.006097938445669 (change=4.554042918780285 %)
[2025-06-05 16:01:19] 2025-06-05 20:01:04,158 | INFO     | left removable region: 20
[2025-06-05 16:01:19] 2025-06-05 20:01:04,158 | INFO     | sum of square deviations: 964988171.7534248
[2025-06-05 16:01:19] 2025-06-05 20:01:04,158 | INFO     | sum of deviations: 2729393985.7945213
[2025-06-05 16:01:19] 2025-06-05 20:01:04,159 | INFO     | mean x: 1749148530.958904
[2025-06-05 16:01:19] 2025-06-05 20:01:04,159 | INFO     | mean y: 2353184.9657534244
[2025-06-05 16:01:19] 2025-06-05 20:01:04,159 | INFO     | -- intersect: -4944977383.84918
[2025-06-05 16:01:19] 2025-06-05 20:01:04,159 | INFO     | intersect: -4944977383.84918
[2025-06-05 16:01:19] 2025-06-05 20:01:04,159 | INFO     | chi2: 0.024879498491996114
[2025-06-05 16:01:19] 2025-06-05 20:01:04,159 | INFO     | -- intersect: -4944977383.84918
[2025-06-05 16:01:19] 2025-06-05 20:01:04,159 | INFO     | current memory leak: 2.83 B/s (using 146 data points, chi2=0.02)
[2025-06-05 16:01:19] 2025-06-05 20:01:04,160 | INFO     | ..............................
[2025-06-05 16:01:19] 2025-06-05 20:01:04,161 | INFO     | . Timing measurements:
[2025-06-05 16:01:19] 2025-06-05 20:01:04,161 | INFO     | . get job = 0 s
[2025-06-05 16:01:19] 2025-06-05 20:01:04,161 | INFO     | . initial setup = 2 s
[2025-06-05 16:01:19] 2025-06-05 20:01:04,161 | INFO     | . payload setup = 6 s
[2025-06-05 16:01:19] 2025-06-05 20:01:04,161 | INFO     | . stage-in = 0 s
[2025-06-05 16:01:19] 2025-06-05 20:01:04,161 | INFO     | . payload execution = 10768 s
[2025-06-05 16:01:19] 2025-06-05 20:01:04,161 | INFO     | . stage-out = 0 s
[2025-06-05 16:01:19] 2025-06-05 20:01:04,162 | INFO     | . log creation = 0 s
[2025-06-05 16:01:19] 2025-06-05 20:01:04,162 | INFO     | ..............................
[2025-06-05 16:01:19] 2025-06-05 20:01:04,163 | INFO     | sufficient remaining disk space (76319555584 B)
[2025-06-05 16:01:19] 2025-06-05 20:01:04,163 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-05 16:01:19] 2025-06-05 20:01:04,270 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6668980485: 4138395 B (within 2537553920 B limit)
[2025-06-05 16:01:19] 2025-06-05 20:01:04,270 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6668980485/HITS.44871837._091324.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-05 16:01:19] 2025-06-05 20:01:04,270 | INFO     | total size of present files: 0 B (workdir size: 4138395 B)
[2025-06-05 16:01:19] 2025-06-05 20:01:04,270 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6668980485/HITS.44871837._091324.pool.root.1 since it does not exist
[2025-06-05 16:01:19] 2025-06-05 20:01:04,535 | INFO     | number of running child processes to parent process 3235531: 1
[2025-06-05 16:01:19] 2025-06-05 20:01:04,535 | INFO     | maximum number of monitored processes: 6
[2025-06-05 16:01:19] 2025-06-05 20:01:04,535 | INFO     | aborting job monitoring since job object (job id=6668980485) has expired
[2025-06-05 16:01:19] 2025-06-05 20:01:04,651 | INFO     | 
[2025-06-05 16:01:19] 2025-06-05 20:01:04,652 | INFO     | job summary report
[2025-06-05 16:01:19] 2025-06-05 20:01:04,652 | INFO     | --------------------------------------------------
[2025-06-05 16:01:19] 2025-06-05 20:01:04,652 | INFO     | PanDA job id: 6668980485
[2025-06-05 16:01:19] 2025-06-05 20:01:04,652 | INFO     | task id: 44871837
[2025-06-05 16:01:19] 2025-06-05 20:01:04,652 | INFO     | errors: (none)
[2025-06-05 16:01:19] 2025-06-05 20:01:04,652 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 16:01:19] 2025-06-05 20:01:04,652 | INFO     | pilot state: finished 
[2025-06-05 16:01:19] 2025-06-05 20:01:04,652 | INFO     | transexitcode: 0
[2025-06-05 16:01:19] 2025-06-05 20:01:04,652 | INFO     | exeerrorcode: 0
[2025-06-05 16:01:19] 2025-06-05 20:01:04,652 | INFO     | exeerrordiag: 
[2025-06-05 16:01:19] 2025-06-05 20:01:04,653 | INFO     | exitcode: 0
[2025-06-05 16:01:19] 2025-06-05 20:01:04,653 | INFO     | exitmsg: OK
[2025-06-05 16:01:19] 2025-06-05 20:01:04,653 | INFO     | cpuconsumptiontime: 52329 s
[2025-06-05 16:01:19] 2025-06-05 20:01:04,653 | INFO     | nevents: 400
[2025-06-05 16:01:19] 2025-06-05 20:01:04,653 | INFO     | neventsw: 0
[2025-06-05 16:01:19] 2025-06-05 20:01:04,653 | INFO     | pid: 3235531
[2025-06-05 16:01:19] 2025-06-05 20:01:04,653 | INFO     | pgrp: 3235531
[2025-06-05 16:01:19] 2025-06-05 20:01:04,653 | INFO     | corecount: 12
[2025-06-05 16:01:19] 2025-06-05 20:01:04,653 | INFO     | event service: False
[2025-06-05 16:01:19] 2025-06-05 20:01:04,653 | INFO     | sizes: {0: 2397390, 4: 2397596, 11: 2397624, 10777: 2426462, 10780: 2435403, 10782: 2435459, 10786: 2435757}
[2025-06-05 16:01:19] 2025-06-05 20:01:04,653 | INFO     | --------------------------------------------------
[2025-06-05 16:01:19] 2025-06-05 20:01:04,653 | INFO     | 
[2025-06-05 16:01:19] 2025-06-05 20:01:04,653 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 16:01:19] 2025-06-05 20:01:04,674 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 16:01:19] 2025-06-05 20:01:04,674 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 16:01:19] 2025-06-05 20:01:04,674 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 16:01:19] 2025-06-05 20:01:04,674 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 16:01:19] 2025-06-05 20:01:04,674 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 16:01:19] 2025-06-05 20:01:04,675 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 16:01:19] 2025-06-05 20:01:04,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 16:01:19] 2025-06-05 20:01:04,675 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 16:01:19] 2025-06-05 20:01:04,675 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 16:01:19] 2025-06-05 20:01:04,675 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 16:01:19] 2025-06-05 20:01:04,675 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 16:01:19] 2025-06-05 20:01:04,675 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 16:01:19] 2025-06-05 20:01:04,675 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 16:01:19] 2025-06-05 20:01:04,675 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 16:01:19] 2025-06-05 20:01:04,675 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 16:01:19] 2025-06-05 20:01:04,675 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 16:01:19] 2025-06-05 20:01:04,675 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 16:01:19] 2025-06-05 20:01:04,675 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 16:01:19] 2025-06-05 20:01:04,675 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 16:01:19] 2025-06-05 20:01:04,675 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 16:01:19] 2025-06-05 20:01:04,676 | INFO     | job 6668980485 has completed (purged errors)
[2025-06-05 16:01:19] 2025-06-05 20:01:04,676 | INFO     | overall cleanup function is called
[2025-06-05 16:01:19] 2025-06-05 20:01:05,684 | INFO     | --- collectZombieJob: --- 10, [3235531]
[2025-06-05 16:01:19] 2025-06-05 20:01:05,684 | INFO     | zombie collector waiting for pid 3235531
[2025-06-05 16:01:19] 2025-06-05 20:01:05,684 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 16:01:19] 2025-06-05 20:01:05,685 | INFO     | collected zombie processes
[2025-06-05 16:01:19] 2025-06-05 20:01:05,685 | INFO     | will attempt to kill all subprocesses of pid=3235531
[2025-06-05 16:01:19] 2025-06-05 20:01:05,932 | INFO     | process IDs to be killed: [3235531] (in reverse order)
[2025-06-05 16:01:19] 2025-06-05 20:01:06,029 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 16:01:19] 2025-06-05 20:01:06,030 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 16:01:19] 2025-06-05 20:01:06,038 | INFO     | did not find any defunct processes belonging to 3235531
[2025-06-05 16:01:19] 2025-06-05 20:01:06,047 | INFO     | did not find any defunct processes belonging to 3235531
[2025-06-05 16:01:19] 2025-06-05 20:01:06,047 | INFO     | ready for new job
[2025-06-05 16:01:19] 2025-06-05 20:01:06,047 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 16:01:19] 2025-06-05 20:01:06,049 | INFO     | **************************************
[2025-06-05 16:01:19] 2025-06-05 20:01:06,050 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 16:01:19] 2025-06-05 20:01:06,050 | INFO     | **************************************
[2025-06-05 16:01:19] 2025-06-05 20:01:06,050 | INFO     | 
[2025-06-05 16:01:19] 2025-06-05 20:01:06,065 | INFO     | architecture information:
[2025-06-05 16:01:19] 2025-06-05 20:01:06,066 | INFO     | executing command: cat /etc/os-release
[2025-06-05 16:01:19] 2025-06-05 20:01:06,083 | INFO     | cat /etc/os-release:
[2025-06-05 16:01:19] NAME="CentOS Linux"
[2025-06-05 16:01:19] VERSION="7 (Core)"
[2025-06-05 16:01:19] ID="centos"
[2025-06-05 16:01:19] ID_LIKE="rhel fedora"
[2025-06-05 16:01:19] VERSION_ID="7"
[2025-06-05 16:01:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 16:01:19] ANSI_COLOR="0;31"
[2025-06-05 16:01:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 16:01:19] HOME_URL="https://www.centos.org/"
[2025-06-05 16:01:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 16:01:19] 
[2025-06-05 16:01:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 16:01:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 16:01:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 16:01:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 16:01:19] 
[2025-06-05 16:01:19] 2025-06-05 20:01:06,083 | INFO     | **************************************
[2025-06-05 16:01:19] 2025-06-05 20:01:06,586 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 16:01:19] 2025-06-05 20:01:06,603 | INFO     | sufficient remaining disk space (76324798464 B)
[2025-06-05 16:01:19] 2025-06-05 20:01:06,603 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 16:01:19] 2025-06-05 20:01:06,603 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 16:01:19] 2025-06-05 20:01:06,604 | INFO     | update_server=False
[2025-06-05 16:01:19] 2025-06-05 20:01:06,604 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 16:01:19] 2025-06-05 20:01:06,604 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 16:01:19] 2025-06-05 20:01:06,604 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 16:01:19] 2025-06-05 20:01:06,605 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 16:01:19] 2025-06-05 20:01:06,605 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 16:01:19] 2025-06-05 20:01:06,605 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 16:01:19] 2025-06-05 20:01:07,039 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 16:01:19] 2025-06-05 20:01:07,039 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 16:01:19] 2025-06-05 20:01:07,039 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:01:19] 2025-06-05 20:01:07,039 | INFO     | will abort loop
[2025-06-05 16:01:19] 2025-06-05 20:01:07,396 | INFO     | all job control threads have been joined
[2025-06-05 16:01:19] 2025-06-05 20:01:07,585 | INFO     | all data control threads have been joined
[2025-06-05 16:01:19] 2025-06-05 20:01:07,610 | INFO     | [job] retrieve thread has finished
[2025-06-05 16:01:19] 2025-06-05 20:01:07,946 | INFO     | [payload] failed_post thread has finished
[2025-06-05 16:01:19] 2025-06-05 20:01:08,045 | INFO     | [job] job monitor thread has finished
[2025-06-05 16:01:19] 2025-06-05 20:01:08,089 | INFO     | all payload control threads have been joined
[2025-06-05 16:01:19] 2025-06-05 20:01:08,184 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 16:01:19] 2025-06-05 20:01:08,339 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 16:01:19] 2025-06-05 20:01:08,401 | INFO     | [job] control thread has finished
[2025-06-05 16:01:19] 2025-06-05 20:01:08,402 | INFO     | [data] copytool_in thread has finished
[2025-06-05 16:01:19] 2025-06-05 20:01:08,427 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 16:01:19] 2025-06-05 20:01:08,591 | INFO     | [data] control thread has finished
[2025-06-05 16:01:19] 2025-06-05 20:01:08,610 | INFO     | [data] copytool_out thread has finished
[2025-06-05 16:01:19] 2025-06-05 20:01:08,662 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 16:01:19] 2025-06-05 20:01:08,963 | INFO     | [job] validate thread has finished
[2025-06-05 16:01:19] 2025-06-05 20:01:09,065 | INFO     | [payload] validate_post thread has finished
[2025-06-05 16:01:19] 2025-06-05 20:01:09,095 | INFO     | [payload] control thread has finished
[2025-06-05 16:01:19] 2025-06-05 20:01:09,279 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:01:19] 2025-06-05 20:01:10,056 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 16:01:19] 2025-06-05 20:01:10,285 | INFO     | [job] queue monitor thread has finished
[2025-06-05 16:01:19] 2025-06-05 20:01:14,064 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 16:01:19] 2025-06-05 20:01:14,426 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140082471999296)>', '<ExcThread(monitor, started 140081759250176)>']
[2025-06-05 16:01:19] 2025-06-05 20:01:14,642 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 16:01:19] 2025-06-05 20:01:14,643 | INFO     | [monitor] control thread has ended
[2025-06-05 16:01:19] 2025-06-05 20:01:19,451 | INFO     | all workflow threads have been joined
[2025-06-05 16:01:19] 2025-06-05 20:01:19,452 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 16:01:19] 2025-06-05 20:01:19,452 | INFO     | traces error code: 0
[2025-06-05 16:01:19] 2025-06-05 20:01:19,453 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 16:01:19] 2025-06-05 20:01:19,643 [wrapper] ==== pilot stdout END ====
[2025-06-05 16:01:19] 2025-06-05 20:01:19,647 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 16:01:19] 2025-06-05 20:01:19,650 [wrapper] pilotpid: 3228898
[2025-06-05 16:01:19] 2025-06-05 20:01:19,653 [wrapper] Pilot exit status: 0
[2025-06-05 16:01:19] 2025-06-05 20:01:19,666 [wrapper] pandaids: 6668980485
[2025-06-05 16:01:19] 2025-06-05 20:01:19,732 [wrapper] cleanup supervisor_pilot 3541231 3228899
[2025-06-05 16:01:19] 2025-06-05 20:01:19,736 [wrapper] Test setup, not cleaning
[2025-06-05 16:01:19] 2025-06-05 20:01:19,739 [wrapper] apfmon messages muted
[2025-06-05 16:01:19] 2025-06-05 20:01:19,742 [wrapper] ==== wrapper stdout END ====
[2025-06-05 16:01:19] 2025-06-05 20:01:19,744 [wrapper] ==== wrapper stderr END ====
[2025-06-05 16:01:19]  *** Error codes and diagnostics ***
[2025-06-05 16:01:19]     "exeErrorCode": 0,
[2025-06-05 16:01:19]     "exeErrorDiag": "",
[2025-06-05 16:01:19]     "pilotErrorCode": 0,
[2025-06-05 16:01:19]     "pilotErrorDiag": "",
[2025-06-05 16:01:19]  *** Listing of results directory ***
[2025-06-05 16:01:19] total 417872
[2025-06-05 16:01:19] -rw-r--r--. 1 boincer umatlas    495897 May 28 18:21 pilot3.tar.gz
[2025-06-05 16:01:19] -rw-r--r--. 1 boincer umatlas      5111 May 28 18:25 queuedata.json
[2025-06-05 16:01:19] -rwx------. 1 boincer umatlas     37140 May 28 18:26 runpilot2-wrapper.sh
[2025-06-05 16:01:19] -rw-r--r--. 1 boincer umatlas       100 Jun  5 13:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 16:01:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 13:00 run_atlas
[2025-06-05 16:01:19] -rw-r--r--. 1 boincer umatlas       105 Jun  5 13:00 job.xml
[2025-06-05 16:01:19] -rw-r--r--. 2 boincer umatlas 222861117 Jun  5 13:00 EVNT.44871834._003552.pool.root.1
[2025-06-05 16:01:19] -rw-r--r--. 2 boincer umatlas    508877 Jun  5 13:00 input.tar.gz
[2025-06-05 16:01:19] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 13:00 start_atlas.sh
[2025-06-05 16:01:19] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 13:00 shared
[2025-06-05 16:01:19] -rw-r--r--. 1 boincer umatlas         0 Jun  5 13:00 boinc_lockfile
[2025-06-05 16:01:19] -rw-r--r--. 1 boincer umatlas      2558 Jun  5 13:00 pandaJob.out
[2025-06-05 16:01:19] -rw-------. 1 boincer umatlas    983229 Jun  5 13:00 agis_schedconf.cvmfs.json
[2025-06-05 16:01:19] -rw-------. 1 boincer umatlas   1598969 Jun  5 13:01 agis_ddmendpoints.agis.ALL.json
[2025-06-05 16:01:19] drwx------. 4 boincer umatlas      4096 Jun  5 13:01 pilot3
[2025-06-05 16:01:19] -rw-------. 1 boincer umatlas 198548681 Jun  5 16:00 HITS.44871837._091324.pool.root.1
[2025-06-05 16:01:19] -rw-r--r--. 1 boincer umatlas       531 Jun  5 16:00 boinc_task_state.xml
[2025-06-05 16:01:19] -rw-------. 1 boincer umatlas        95 Jun  5 16:00 pilot_heartbeat.json
[2025-06-05 16:01:19] -rw-r--r--. 1 boincer umatlas      6841 Jun  5 16:00 init_data.xml
[2025-06-05 16:01:19] -rw-------. 1 boincer umatlas      1042 Jun  5 16:00 memory_monitor_summary.json
[2025-06-05 16:01:19] -rw-------. 1 boincer umatlas    407003 Jun  5 16:00 log.44871837._091324.job.log.tgz.1
[2025-06-05 16:01:19] -rw-------. 1 boincer umatlas      7720 Jun  5 16:01 heartbeat.json
[2025-06-05 16:01:19] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 16:01 boinc_mmap_file
[2025-06-05 16:01:19] -rw-r--r--. 1 boincer umatlas        28 Jun  5 16:01 wrapper_checkpoint.txt
[2025-06-05 16:01:19] -rw-------. 1 boincer umatlas      4662 Jun  5 16:01 pilotlog.txt
[2025-06-05 16:01:19] -rw-------. 1 boincer umatlas    921966 Jun  5 16:01 log.44871837._091324.job.log.1
[2025-06-05 16:01:19] -rw-------. 1 boincer umatlas       357 Jun  5 16:01 output.list
[2025-06-05 16:01:19] -rw-r--r--. 1 boincer umatlas       620 Jun  5 16:01 runtime_log
[2025-06-05 16:01:19] -rw-------. 1 boincer umatlas   1351680 Jun  5 16:01 result.tar.gz
[2025-06-05 16:01:19] -rw-------. 1 boincer umatlas       656 Jun  5 16:01 yRqKDmNPee7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfDdKDmnhwjVm.diag
[2025-06-05 16:01:19] -rw-r--r--. 1 boincer umatlas      8662 Jun  5 16:01 runtime_log.err
[2025-06-05 16:01:19] -rw-r--r--. 1 boincer umatlas     21352 Jun  5 16:01 stderr.txt
[2025-06-05 16:01:19] HITS file was successfully produced:
[2025-06-05 16:01:19] -rw-------. 1 boincer umatlas 198548681 Jun  5 16:00 shared/HITS.pool.root.1
[2025-06-05 16:01:19]  *** Contents of shared directory: ***
[2025-06-05 16:01:19] total 413376
[2025-06-05 16:01:19] -rw-r--r--. 2 boincer umatlas 222861117 Jun  5 13:00 ATLAS.root_0
[2025-06-05 16:01:19] -rw-r--r--. 2 boincer umatlas    508877 Jun  5 13:00 input.tar.gz
[2025-06-05 16:01:19] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 13:00 start_atlas.sh
[2025-06-05 16:01:19] -rw-------. 1 boincer umatlas 198548681 Jun  5 16:00 HITS.pool.root.1
[2025-06-05 16:01:19] -rw-------. 1 boincer umatlas   1351680 Jun  5 16:01 result.tar.gz
16:01:21 (3225322): run_atlas exited; CPU time 52503.516388
16:01:21 (3225322): called boinc_finish(0)

</stderr_txt>
]]>

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