Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:11:25 (3675545): wrapper (7.7.26015): starting
12:11:25 (3675545): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 12:11:25] Arguments: --nthreads 8
[2025-06-05 12:11:25] Threads: 8
[2025-06-05 12:11:25] Checking for CVMFS
[2025-06-05 12:11:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 12:11:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 12:11:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 12:11:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 12:11:25] 2.12.6.0 1699072 24956 584196 146825 2 401 18410379 32935936 17441 16776704 0 130698293 99.680 101773158 28258 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 12:11:25] CVMFS is ok
[2025-06-05 12:11:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 12:11:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 12:11:25] Further information can be found at the LHC@home message board.
[2025-06-05 12:11:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 12:11:25] Checking for apptainer binary...
[2025-06-05 12:11:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 12:11:25] Running /usr/bin/apptainer --version
[2025-06-05 12:11:26] apptainer version 1.4.1-1.el9
[2025-06-05 12:11:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 12:11:26] c6-2-11-3.aglt2.org
[2025-06-05 12:11:26] apptainer works
[2025-06-05 12:11:26] Set ATHENA_PROC_NUMBER=8
[2025-06-05 12:11:26] Set ATHENA_CORE_NUMBER=8
[2025-06-05 12:11:26] Starting ATLAS job with PandaID=6668233191
[2025-06-05 12:11:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 14:15:18]  *** The last 200 lines of the pilot log: ***
[2025-06-05 14:15:18] 2025-06-05 18:15:02,498 | INFO     | extracted standard info from prmon json
[2025-06-05 14:15:18] 2025-06-05 18:15:02,498 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 14:15:18] 2025-06-05 18:15:02,498 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 14:15:18] 2025-06-05 18:15:02,499 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 14:15:18] 2025-06-05 18:15:02,499 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 14:15:18] 2025-06-05 18:15:02,500 | INFO     | fitting pss+swap vs Time
[2025-06-05 14:15:18] 2025-06-05 18:15:02,500 | INFO     | sum of square deviations: 549294020.0
[2025-06-05 14:15:18] 2025-06-05 18:15:02,501 | INFO     | sum of deviations: 13735551292.000002
[2025-06-05 14:15:18] 2025-06-05 18:15:02,501 | INFO     | mean x: 1749143582.0
[2025-06-05 14:15:18] 2025-06-05 18:15:02,501 | INFO     | mean y: 2178179.082644628
[2025-06-05 14:15:18] 2025-06-05 18:15:02,501 | INFO     | -- intersect: -43736603808.08265
[2025-06-05 14:15:18] 2025-06-05 18:15:02,501 | INFO     | intersect: -43736603808.08265
[2025-06-05 14:15:18] 2025-06-05 18:15:02,501 | INFO     | chi2: 1.7389006654969903
[2025-06-05 14:15:18] 2025-06-05 18:15:02,501 | INFO     | sum of square deviations: 483971865.0
[2025-06-05 14:15:18] 2025-06-05 18:15:02,502 | INFO     | sum of deviations: 15258398540.99999
[2025-06-05 14:15:18] 2025-06-05 18:15:02,502 | INFO     | mean x: 1749143429.5
[2025-06-05 14:15:18] 2025-06-05 18:15:02,502 | INFO     | mean y: 2181671.103448276
[2025-06-05 14:15:18] 2025-06-05 18:15:02,502 | INFO     | -- intersect: -55143849498.87483
[2025-06-05 14:15:18] 2025-06-05 18:15:02,502 | INFO     | intersect: -55143849498.87483
[2025-06-05 14:15:18] 2025-06-05 18:15:02,502 | INFO     | chi2: 1.7168318855550753
[2025-06-05 14:15:18] 2025-06-05 18:15:02,502 | INFO     | current chi2=1.7168318855550753 (change=1.2691225197505813 %)
[2025-06-05 14:15:18] 2025-06-05 18:15:02,502 | INFO     | right removable region: 115
[2025-06-05 14:15:18] 2025-06-05 18:15:02,502 | INFO     | sum of square deviations: 483971865.0
[2025-06-05 14:15:18] 2025-06-05 18:15:02,502 | INFO     | sum of deviations: -5736337215.0
[2025-06-05 14:15:18] 2025-06-05 18:15:02,502 | INFO     | mean x: 1749143734.5
[2025-06-05 14:15:18] 2025-06-05 18:15:02,503 | INFO     | mean y: 2223113.103448276
[2025-06-05 14:15:18] 2025-06-05 18:15:02,503 | INFO     | -- intersect: 20734168550.87477
[2025-06-05 14:15:18] 2025-06-05 18:15:02,503 | INFO     | intersect: 20734168550.87477
[2025-06-05 14:15:18] 2025-06-05 18:15:02,503 | INFO     | chi2: 0.07971633606145687
[2025-06-05 14:15:18] 2025-06-05 18:15:02,503 | INFO     | current chi2=0.07971633606145687 (change=95.41570501161011 %)
[2025-06-05 14:15:18] 2025-06-05 18:15:02,503 | INFO     | sum of square deviations: 424045160.0
[2025-06-05 14:15:18] 2025-06-05 18:15:02,503 | INFO     | sum of deviations: -7796507538.999999
[2025-06-05 14:15:18] 2025-06-05 18:15:02,503 | INFO     | mean x: 1749143887.0
[2025-06-05 14:15:18] 2025-06-05 18:15:02,503 | INFO     | mean y: 2228279.774774775
[2025-06-05 14:15:18] 2025-06-05 18:15:02,503 | INFO     | -- intersect: 32162042347.19925
[2025-06-05 14:15:18] 2025-06-05 18:15:02,503 | INFO     | intersect: 32162042347.19925
[2025-06-05 14:15:18] 2025-06-05 18:15:02,504 | INFO     | chi2: 0.04212466413818933
[2025-06-05 14:15:18] 2025-06-05 18:15:02,504 | INFO     | current chi2=0.04212466413818933 (change=47.15679844378002 %)
[2025-06-05 14:15:18] 2025-06-05 18:15:02,504 | INFO     | sum of square deviations: 369281342.5
[2025-06-05 14:15:18] 2025-06-05 18:15:02,504 | INFO     | sum of deviations: -8124556694.0
[2025-06-05 14:15:18] 2025-06-05 18:15:02,504 | INFO     | mean x: 1749144039.5
[2025-06-05 14:15:18] 2025-06-05 18:15:02,504 | INFO     | mean y: 2229159.849056604
[2025-06-05 14:15:18] 2025-06-05 18:15:02,504 | INFO     | -- intersect: 38485137120.166405
[2025-06-05 14:15:18] 2025-06-05 18:15:02,504 | INFO     | intersect: 38485137120.166405
[2025-06-05 14:15:18] 2025-06-05 18:15:02,504 | INFO     | chi2: 0.03349304122986916
[2025-06-05 14:15:18] 2025-06-05 18:15:02,504 | INFO     | current chi2=0.03349304122986916 (change=20.490662857285365 %)
[2025-06-05 14:15:18] 2025-06-05 18:15:02,504 | INFO     | left removable region: 30
[2025-06-05 14:15:18] 2025-06-05 18:15:02,504 | INFO     | sum of square deviations: 190403570.0
[2025-06-05 14:15:18] 2025-06-05 18:15:02,505 | INFO     | sum of deviations: -4380855482.999998
[2025-06-05 14:15:18] 2025-06-05 18:15:02,505 | INFO     | mean x: 1749144314.0
[2025-06-05 14:15:18] 2025-06-05 18:15:02,505 | INFO     | mean y: 2230156.1764705884
[2025-06-05 14:15:18] 2025-06-05 18:15:02,505 | INFO     | -- intersect: 40247003185.09168
[2025-06-05 14:15:18] 2025-06-05 18:15:02,505 | INFO     | intersect: 40247003185.09168
[2025-06-05 14:15:18] 2025-06-05 18:15:02,505 | INFO     | chi2: 0.01906744905228763
[2025-06-05 14:15:18] 2025-06-05 18:15:02,505 | INFO     | -- intersect: 40247003185.09168
[2025-06-05 14:15:18] 2025-06-05 18:15:02,505 | INFO     | current memory leak: -23.01 B/s (using 85 data points, chi2=0.02)
[2025-06-05 14:15:18] 2025-06-05 18:15:02,505 | INFO     | ..............................
[2025-06-05 14:15:18] 2025-06-05 18:15:02,505 | INFO     | . Timing measurements:
[2025-06-05 14:15:18] 2025-06-05 18:15:02,506 | INFO     | . get job = 0 s
[2025-06-05 14:15:18] 2025-06-05 18:15:02,506 | INFO     | . initial setup = 2 s
[2025-06-05 14:15:18] 2025-06-05 18:15:02,506 | INFO     | . payload setup = 6 s
[2025-06-05 14:15:18] 2025-06-05 18:15:02,506 | INFO     | . stage-in = 0 s
[2025-06-05 14:15:18] 2025-06-05 18:15:02,506 | INFO     | . payload execution = 7375 s
[2025-06-05 14:15:18] 2025-06-05 18:15:02,506 | INFO     | . stage-out = 1 s
[2025-06-05 14:15:18] 2025-06-05 18:15:02,506 | INFO     | . log creation = 0 s
[2025-06-05 14:15:18] 2025-06-05 18:15:02,506 | INFO     | ..............................
[2025-06-05 14:15:18] 2025-06-05 18:15:02,558 | INFO     | 
[2025-06-05 14:15:18] 2025-06-05 18:15:02,558 | INFO     | job summary report
[2025-06-05 14:15:18] 2025-06-05 18:15:02,558 | INFO     | --------------------------------------------------
[2025-06-05 14:15:18] 2025-06-05 18:15:02,558 | INFO     | PanDA job id: 6668233191
[2025-06-05 14:15:18] 2025-06-05 18:15:02,559 | INFO     | task id: 44871837
[2025-06-05 14:15:18] 2025-06-05 18:15:02,559 | INFO     | errors: (none)
[2025-06-05 14:15:18] 2025-06-05 18:15:02,559 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 14:15:18] 2025-06-05 18:15:02,559 | INFO     | pilot state: finished 
[2025-06-05 14:15:18] 2025-06-05 18:15:02,559 | INFO     | transexitcode: 0
[2025-06-05 14:15:18] 2025-06-05 18:15:02,559 | INFO     | exeerrorcode: 0
[2025-06-05 14:15:18] 2025-06-05 18:15:02,559 | INFO     | exeerrordiag: 
[2025-06-05 14:15:18] 2025-06-05 18:15:02,559 | INFO     | exitcode: 0
[2025-06-05 14:15:18] 2025-06-05 18:15:02,559 | INFO     | exitmsg: OK
[2025-06-05 14:15:18] 2025-06-05 18:15:02,559 | INFO     | cpuconsumptiontime: 51250 s
[2025-06-05 14:15:18] 2025-06-05 18:15:02,559 | INFO     | nevents: 400
[2025-06-05 14:15:18] 2025-06-05 18:15:02,559 | INFO     | neventsw: 0
[2025-06-05 14:15:18] 2025-06-05 18:15:02,559 | INFO     | pid: 3692011
[2025-06-05 14:15:18] 2025-06-05 18:15:02,559 | INFO     | pgrp: 3692011
[2025-06-05 14:15:18] 2025-06-05 18:15:02,559 | INFO     | corecount: 8
[2025-06-05 14:15:18] 2025-06-05 18:15:02,559 | INFO     | event service: False
[2025-06-05 14:15:18] 2025-06-05 18:15:02,559 | INFO     | sizes: {0: 2397221, 1: 2397420, 5: 2397626, 11: 2397682, 7385: 2425166, 7386: 2434135, 7387: 2434319, 7392: 2434489}
[2025-06-05 14:15:18] 2025-06-05 18:15:02,559 | INFO     | --------------------------------------------------
[2025-06-05 14:15:18] 2025-06-05 18:15:02,559 | INFO     | 
[2025-06-05 14:15:18] 2025-06-05 18:15:02,559 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 14:15:18] 2025-06-05 18:15:02,572 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 14:15:18] 2025-06-05 18:15:02,572 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 14:15:18] 2025-06-05 18:15:02,573 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 14:15:18] 2025-06-05 18:15:02,573 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 14:15:18] 2025-06-05 18:15:02,573 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 14:15:18] 2025-06-05 18:15:02,573 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 14:15:18] 2025-06-05 18:15:02,573 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 14:15:18] 2025-06-05 18:15:02,573 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 14:15:18] 2025-06-05 18:15:02,573 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 14:15:18] 2025-06-05 18:15:02,573 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 14:15:18] 2025-06-05 18:15:02,573 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 14:15:18] 2025-06-05 18:15:02,573 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 14:15:18] 2025-06-05 18:15:02,573 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 14:15:18] 2025-06-05 18:15:02,573 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 14:15:18] 2025-06-05 18:15:02,573 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 14:15:18] 2025-06-05 18:15:02,573 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 14:15:18] 2025-06-05 18:15:02,573 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 14:15:18] 2025-06-05 18:15:02,573 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 14:15:18] 2025-06-05 18:15:02,573 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 14:15:18] 2025-06-05 18:15:02,573 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 14:15:18] 2025-06-05 18:15:02,573 | INFO     | job 6668233191 has completed (purged errors)
[2025-06-05 14:15:18] 2025-06-05 18:15:02,573 | INFO     | overall cleanup function is called
[2025-06-05 14:15:18] 2025-06-05 18:15:03,580 | INFO     | --- collectZombieJob: --- 10, [3692011]
[2025-06-05 14:15:18] 2025-06-05 18:15:03,580 | INFO     | zombie collector waiting for pid 3692011
[2025-06-05 14:15:18] 2025-06-05 18:15:03,580 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 14:15:18] 2025-06-05 18:15:03,580 | INFO     | collected zombie processes
[2025-06-05 14:15:18] 2025-06-05 18:15:03,580 | INFO     | will attempt to kill all subprocesses of pid=3692011
[2025-06-05 14:15:18] 2025-06-05 18:15:03,790 | INFO     | process IDs to be killed: [3692011] (in reverse order)
[2025-06-05 14:15:18] 2025-06-05 18:15:03,867 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 14:15:18] 2025-06-05 18:15:03,868 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 14:15:18] 2025-06-05 18:15:03,878 | INFO     | did not find any defunct processes belonging to 3692011
[2025-06-05 14:15:18] 2025-06-05 18:15:03,888 | INFO     | did not find any defunct processes belonging to 3692011
[2025-06-05 14:15:18] 2025-06-05 18:15:03,888 | INFO     | ready for new job
[2025-06-05 14:15:18] 2025-06-05 18:15:03,888 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 14:15:18] 2025-06-05 18:15:03,890 | INFO     | **************************************
[2025-06-05 14:15:18] 2025-06-05 18:15:03,890 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 14:15:18] 2025-06-05 18:15:03,890 | INFO     | **************************************
[2025-06-05 14:15:18] 2025-06-05 18:15:03,890 | INFO     | 
[2025-06-05 14:15:18] 2025-06-05 18:15:03,907 | INFO     | architecture information:
[2025-06-05 14:15:18] 2025-06-05 18:15:03,908 | INFO     | executing command: cat /etc/os-release
[2025-06-05 14:15:18] 2025-06-05 18:15:03,919 | INFO     | cat /etc/os-release:
[2025-06-05 14:15:18] NAME="CentOS Linux"
[2025-06-05 14:15:18] VERSION="7 (Core)"
[2025-06-05 14:15:18] ID="centos"
[2025-06-05 14:15:18] ID_LIKE="rhel fedora"
[2025-06-05 14:15:18] VERSION_ID="7"
[2025-06-05 14:15:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 14:15:18] ANSI_COLOR="0;31"
[2025-06-05 14:15:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 14:15:18] HOME_URL="https://www.centos.org/"
[2025-06-05 14:15:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 14:15:18] 
[2025-06-05 14:15:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 14:15:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 14:15:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 14:15:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 14:15:18] 
[2025-06-05 14:15:18] 2025-06-05 18:15:03,919 | INFO     | **************************************
[2025-06-05 14:15:18] 2025-06-05 18:15:04,421 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 14:15:18] 2025-06-05 18:15:04,436 | INFO     | sufficient remaining disk space (76189532160 B)
[2025-06-05 14:15:18] 2025-06-05 18:15:04,436 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 14:15:18] 2025-06-05 18:15:04,436 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 14:15:18] 2025-06-05 18:15:04,437 | INFO     | update_server=False
[2025-06-05 14:15:18] 2025-06-05 18:15:04,437 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 14:15:18] 2025-06-05 18:15:04,437 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:15:18] 2025-06-05 18:15:04,738 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 14:15:18] 2025-06-05 18:15:04,739 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 14:15:18] 2025-06-05 18:15:04,739 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:15:18] 2025-06-05 18:15:04,739 | INFO     | will abort loop
[2025-06-05 14:15:18] 2025-06-05 18:15:05,119 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 14:15:18] 2025-06-05 18:15:05,121 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 14:15:18] 2025-06-05 18:15:05,122 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 14:15:18] 2025-06-05 18:15:05,193 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 14:15:18] 2025-06-05 18:15:05,239 | INFO     | all payload control threads have been joined
[2025-06-05 14:15:18] 2025-06-05 18:15:05,441 | INFO     | [job] queue monitor thread has finished
[2025-06-05 14:15:18] 2025-06-05 18:15:05,442 | INFO     | [job] retrieve thread has finished
[2025-06-05 14:15:18] 2025-06-05 18:15:05,534 | INFO     | all job control threads have been joined
[2025-06-05 14:15:18] 2025-06-05 18:15:05,539 | INFO     | all data control threads have been joined
[2025-06-05 14:15:18] 2025-06-05 18:15:05,743 | INFO     | [job] job monitor thread has finished
[2025-06-05 14:15:18] 2025-06-05 18:15:05,909 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 14:15:18] 2025-06-05 18:15:06,219 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 14:15:18] 2025-06-05 18:15:06,232 | INFO     | [job] validate thread has finished
[2025-06-05 14:15:18] 2025-06-05 18:15:06,244 | INFO     | [payload] control thread has finished
[2025-06-05 14:15:18] 2025-06-05 18:15:06,500 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 14:15:18] 2025-06-05 18:15:06,523 | INFO     | [payload] failed_post thread has finished
[2025-06-05 14:15:18] 2025-06-05 18:15:06,538 | INFO     | [job] control thread has finished
[2025-06-05 14:15:18] 2025-06-05 18:15:06,541 | INFO     | [data] control thread has finished
[2025-06-05 14:15:18] 2025-06-05 18:15:06,572 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 14:15:18] 2025-06-05 18:15:06,577 | INFO     | [payload] validate_post thread has finished
[2025-06-05 14:15:18] 2025-06-05 18:15:06,618 | INFO     | [data] copytool_in thread has finished
[2025-06-05 14:15:18] 2025-06-05 18:15:07,198 | INFO     | [data] copytool_out thread has finished
[2025-06-05 14:15:18] 2025-06-05 18:15:07,909 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 14:15:18] 2025-06-05 18:15:11,915 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 14:15:18] 2025-06-05 18:15:13,584 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140355787974464)>', '<ExcThread(monitor, started 140355160762112)>']
[2025-06-05 14:15:18] 2025-06-05 18:15:14,164 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 14:15:18] 2025-06-05 18:15:14,164 | INFO     | [monitor] control thread has ended
[2025-06-05 14:15:18] 2025-06-05 18:15:18,596 | INFO     | all workflow threads have been joined
[2025-06-05 14:15:18] 2025-06-05 18:15:18,596 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 14:15:18] 2025-06-05 18:15:18,596 | INFO     | traces error code: 0
[2025-06-05 14:15:18] 2025-06-05 18:15:18,597 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 14:15:18] 2025-06-05 18:15:18,751 [wrapper] ==== pilot stdout END ====
[2025-06-05 14:15:18] 2025-06-05 18:15:18,755 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 14:15:18] 2025-06-05 18:15:18,757 [wrapper] pilotpid: 3680023
[2025-06-05 14:15:18] 2025-06-05 18:15:18,760 [wrapper] Pilot exit status: 0
[2025-06-05 14:15:18] 2025-06-05 18:15:18,769 [wrapper] pandaids: 6668233191
[2025-06-05 14:15:18] 2025-06-05 18:15:18,834 [wrapper] cleanup supervisor_pilot 3989794 3680024
[2025-06-05 14:15:18] 2025-06-05 18:15:18,836 [wrapper] Test setup, not cleaning
[2025-06-05 14:15:18] 2025-06-05 18:15:18,839 [wrapper] apfmon messages muted
[2025-06-05 14:15:18] 2025-06-05 18:15:18,842 [wrapper] ==== wrapper stdout END ====
[2025-06-05 14:15:18] 2025-06-05 18:15:18,844 [wrapper] ==== wrapper stderr END ====
[2025-06-05 14:15:18]  *** Error codes and diagnostics ***
[2025-06-05 14:15:18]     "exeErrorCode": 0,
[2025-06-05 14:15:18]     "exeErrorDiag": "",
[2025-06-05 14:15:18]     "pilotErrorCode": 0,
[2025-06-05 14:15:18]     "pilotErrorDiag": "",
[2025-06-05 14:15:18]  *** Listing of results directory ***
[2025-06-05 14:15:18] total 419084
[2025-06-05 14:15:18] -rw-r--r--. 1 boincer umatlas    495897 May 28 04:16 pilot3.tar.gz
[2025-06-05 14:15:18] -rw-r--r--. 1 boincer umatlas      5111 May 28 04:40 queuedata.json
[2025-06-05 14:15:18] -rwx------. 1 boincer umatlas     37140 May 28 04:41 runpilot2-wrapper.sh
[2025-06-05 14:15:18] -rw-r--r--. 1 boincer umatlas       100 Jun  5 12:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 14:15:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 12:11 run_atlas
[2025-06-05 14:15:18] -rw-r--r--. 1 boincer umatlas       105 Jun  5 12:11 job.xml
[2025-06-05 14:15:18] -rw-r--r--. 2 boincer umatlas 225201707 Jun  5 12:11 EVNT.44871834._003183.pool.root.1
[2025-06-05 14:15:18] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 12:11 start_atlas.sh
[2025-06-05 14:15:18] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 12:11 shared
[2025-06-05 14:15:18] -rw-r--r--. 2 boincer umatlas    508883 Jun  5 12:11 input.tar.gz
[2025-06-05 14:15:18] -rw-r--r--. 1 boincer umatlas         0 Jun  5 12:11 boinc_lockfile
[2025-06-05 14:15:18] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 12:11 pandaJob.out
[2025-06-05 14:15:18] -rw-------. 1 boincer umatlas    983229 Jun  5 12:11 agis_schedconf.cvmfs.json
[2025-06-05 14:15:18] -rw-------. 1 boincer umatlas   1598969 Jun  5 12:11 agis_ddmendpoints.agis.ALL.json
[2025-06-05 14:15:18] drwx------. 4 boincer umatlas      4096 Jun  5 12:11 pilot3
[2025-06-05 14:15:18] -rw-r--r--. 1 boincer umatlas      6855 Jun  5 14:12 init_data.xml
[2025-06-05 14:15:18] -rw-r--r--. 1 boincer umatlas       530 Jun  5 14:14 boinc_task_state.xml
[2025-06-05 14:15:18] -rw-------. 1 boincer umatlas 198033661 Jun  5 14:14 HITS.44871837._081524.pool.root.1
[2025-06-05 14:15:18] -rw-------. 1 boincer umatlas        95 Jun  5 14:14 pilot_heartbeat.json
[2025-06-05 14:15:18] -rw-------. 1 boincer umatlas      1042 Jun  5 14:14 memory_monitor_summary.json
[2025-06-05 14:15:18] -rw-------. 1 boincer umatlas    342491 Jun  5 14:14 log.44871837._081524.job.log.tgz.1
[2025-06-05 14:15:18] -rw-------. 1 boincer umatlas      7726 Jun  5 14:15 heartbeat.json
[2025-06-05 14:15:18] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 14:15 boinc_mmap_file
[2025-06-05 14:15:18] -rw-r--r--. 1 boincer umatlas        27 Jun  5 14:15 wrapper_checkpoint.txt
[2025-06-05 14:15:18] -rw-------. 1 boincer umatlas      4539 Jun  5 14:15 pilotlog.txt
[2025-06-05 14:15:18] -rw-------. 1 boincer umatlas    693115 Jun  5 14:15 log.44871837._081524.job.log.1
[2025-06-05 14:15:18] -rw-------. 1 boincer umatlas       357 Jun  5 14:15 output.list
[2025-06-05 14:15:18] -rw-r--r--. 1 boincer umatlas       620 Jun  5 14:15 runtime_log
[2025-06-05 14:15:18] -rw-------. 1 boincer umatlas   1054720 Jun  5 14:15 result.tar.gz
[2025-06-05 14:15:18] -rw-r--r--. 1 boincer umatlas      8664 Jun  5 14:15 runtime_log.err
[2025-06-05 14:15:18] -rw-------. 1 boincer umatlas       654 Jun  5 14:15 p67KDmsWRe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGhbKDmpPzm7m.diag
[2025-06-05 14:15:18] -rw-r--r--. 1 boincer umatlas     20790 Jun  5 14:15 stderr.txt
[2025-06-05 14:15:18] HITS file was successfully produced:
[2025-06-05 14:15:18] -rw-------. 1 boincer umatlas 198033661 Jun  5 14:14 shared/HITS.pool.root.1
[2025-06-05 14:15:18]  *** Contents of shared directory: ***
[2025-06-05 14:15:18] total 414876
[2025-06-05 14:15:18] -rw-r--r--. 2 boincer umatlas 225201707 Jun  5 12:11 ATLAS.root_0
[2025-06-05 14:15:18] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 12:11 start_atlas.sh
[2025-06-05 14:15:18] -rw-r--r--. 2 boincer umatlas    508883 Jun  5 12:11 input.tar.gz
[2025-06-05 14:15:18] -rw-------. 1 boincer umatlas 198033661 Jun  5 14:14 HITS.pool.root.1
[2025-06-05 14:15:18] -rw-------. 1 boincer umatlas   1054720 Jun  5 14:15 result.tar.gz
14:15:20 (3675545): run_atlas exited; CPU time 51508.907568
14:15:20 (3675545): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN