Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-06 17:01:04 (7068): Detected: vboxwrapper 26206
2025-06-06 17:01:04 (7068): Detected: BOINC client v8.0.2
2025-06-06 17:01:05 (7068): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2025-06-06 17:01:05 (7068): Successfully copied 'init_data.xml' to the shared directory.
2025-06-06 17:01:05 (7068): Create VM. (boinc_99c603f5eda18b7c, slot#9)
2025-06-06 17:01:06 (7068): Setting Memory Size for VM. (4200MB)
2025-06-06 17:01:06 (7068): Setting CPU Count for VM. (2)
2025-06-06 17:01:06 (7068): Setting Chipset Options for VM.
2025-06-06 17:01:07 (7068): Setting Graphics Controller Options for VM.
2025-06-06 17:01:07 (7068): Setting Boot Options for VM.
2025-06-06 17:01:07 (7068): Setting Network Configuration for NAT.
2025-06-06 17:01:07 (7068): Enabling VM Network Access.
2025-06-06 17:01:08 (7068): Disabling USB Support for VM.
2025-06-06 17:01:08 (7068): Disabling COM Port Support for VM.
2025-06-06 17:01:08 (7068): Disabling LPT Port Support for VM.
2025-06-06 17:01:08 (7068): Disabling Audio Support for VM.
2025-06-06 17:01:09 (7068): Disabling Clipboard Support for VM.
2025-06-06 17:01:09 (7068): Disabling Drag and Drop Support for VM.
2025-06-06 17:01:09 (7068): Adding storage controller(s) to VM.
2025-06-06 17:01:09 (7068): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-06 17:01:10 (7068): Adding VirtualBox Guest Additions to VM.
2025-06-06 17:01:10 (7068): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-06 17:01:10 (7068): forwarding host port 51166 to guest port 80
2025-06-06 17:01:11 (7068): Enabling remote desktop for VM.
2025-06-06 17:01:11 (7068): Required extension pack not installed, remote desktop not enabled.
2025-06-06 17:01:11 (7068): Enabling shared directory for VM.
2025-06-06 17:01:11 (7068): Starting VM using VBoxManage interface. (boinc_99c603f5eda18b7c, slot#9)
2025-06-06 17:01:15 (7068): Successfully started VM. (PID = '3020')
2025-06-06 17:01:15 (7068): Reporting VM Process ID to BOINC.
2025-06-06 17:01:15 (7068): Guest Log: BIOS: VirtualBox 6.1.12
2025-06-06 17:01:15 (7068): Guest Log: CPUID EDX: 0x178bfbff
2025-06-06 17:01:15 (7068): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-06 17:01:15 (7068): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-06 17:01:15 (7068): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-06 17:01:15 (7068): Detected: Web Application Enabled (http://localhost:51166)
2025-06-06 17:01:15 (7068): Preference change detected
2025-06-06 17:01:15 (7068): Setting CPU throttle for VM. (60%)
2025-06-06 17:01:15 (7068): Setting checkpoint interval to 18000 seconds. (Higher value of (Preference: 18000 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-06 17:01:17 (7068): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-06 17:01:17 (7068): Guest Log: BIOS: Booting from Hard Disk...
2025-06-06 17:01:20 (7068): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-06 17:01:20 (7068): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-06 17:01:20 (7068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-06 17:01:27 (7068): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-06 17:01:27 (7068): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-06 17:01:34 (7068): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-06 17:01:34 (7068): Guest Log: 00:00:00.000123 main     Log opened 2025-06-06T17:01:32.834039000Z
2025-06-06 17:01:34 (7068): Guest Log: 00:00:00.000203 main     OS Product: Linux
2025-06-06 17:01:34 (7068): Guest Log: 00:00:00.000242 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-06 17:01:34 (7068): Guest Log: 00:00:00.000264 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-06 17:01:34 (7068): Guest Log: 00:00:00.000285 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-06 17:01:34 (7068): Guest Log: 00:00:00.000286 main     Process ID: 1257
2025-06-06 17:01:34 (7068): Guest Log: 00:00:00.000286 main     Package type: LINUX_64BITS_GENERIC
2025-06-06 17:01:34 (7068): Guest Log: 00:00:00.006446 main     5.2.32 r132073 started. Verbose level = 0
2025-06-06 17:01:35 (7068): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-06 17:01:35 (7068): Guest Log: [INFO] Mounting shared directory
2025-06-06 17:01:35 (7068): Guest Log: [INFO] Checking for init_data.xml
2025-06-06 17:01:44 (7068): Guest Log: 00:00:10.008712 timesync vgsvcTimeSyncWorker: Radical guest time change: -43 188 861 174 000ns (GuestNow=1 749 186 103 981 211 000 ns GuestLast=1 749 229 292 842 385 000 ns fSetTimeLastLoop=true )
2025-06-06 17:01:50 (7068): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-06 17:01:50 (7068): Guest Log: [INFO] Detected branch: prod
2025-06-06 17:01:50 (7068): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-06 17:01:50 (7068): Guest Log: Copying input files
2025-06-06 17:01:52 (7068): Guest Log: Copied input files into RunAtlas.
2025-06-06 17:01:52 (7068): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-06 17:01:52 (7068): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-06 17:01:52 (7068): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-06 17:01:52 (7068): Guest Log: Further information can be found at the LHC@home message board.
2025-06-06 17:02:02 (7068): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-06 17:02:02 (7068): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-06 17:02:02 (7068): Guest Log: 2.6.3.0 1535 0 32104 146843 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-06 17:02:03 (7068): Guest Log: copied the webapp to /var/www
2025-06-06 17:02:03 (7068): Guest Log: ATHENA_PROC_NUMBER=2
2025-06-06 17:02:03 (7068): Guest Log: ATHENA_CORE_NUMBER=2
2025-06-06 17:02:05 (7068): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-06 17:02:05 (7068): Guest Log:  *** Starting ATLAS job. (PandaID=6668325969 taskID=44871837) ***
2025-06-06 18:41:18 (7068): Status Report: Elapsed Time: '6000.000000'
2025-06-06 18:41:18 (7068): Status Report: CPU Time: '5998.343750'
2025-06-06 20:21:22 (7068): Status Report: Elapsed Time: '12000.000000'
2025-06-06 20:21:22 (7068): Status Report: CPU Time: '13238.515625'
2025-06-06 22:01:27 (7068): Status Report: Elapsed Time: '18000.000000'
2025-06-06 22:01:27 (7068): Status Report: CPU Time: '20475.406250'
2025-06-06 23:41:31 (7068): Status Report: Elapsed Time: '24000.000000'
2025-06-06 23:41:31 (7068): Status Report: CPU Time: '27712.359375'
2025-06-06 23:54:13 (7068): Guest Log:  *** Job finished ***
2025-06-06 23:54:13 (7068): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-06 23:54:13 (7068): Guest Log: 2025-06-06 11:53:57,422 | INFO     | [data] queue_monitor thread has finished
2025-06-06 23:54:13 (7068): Guest Log: 2025-06-06 11:54:02,397 | INFO     | job.realtimelogging is not enabled
2025-06-06 23:54:13 (7068): Guest Log: 2025-06-06 11:54:03,419 | INFO     | [payload] run_realtimelog thread has finished
2025-06-06 23:54:13 (7068): Guest Log: 2025-06-06 11:54:04,924 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140485531920192)>', '<ExcThread(monitor, started 140484915734272)>']
2025-06-06 23:54:13 (7068): Guest Log: 2025-06-06 11:54:05,885 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-06 23:54:13 (7068): Guest Log: 2025-06-06 11:54:05,885 | INFO     | [monitor] control thread has ended
2025-06-06 23:54:13 (7068): Guest Log: 2025-06-06 11:54:09,929 | INFO     | all workflow threads have been joined
2025-06-06 23:54:13 (7068): Guest Log: 2025-06-06 11:54:09,929 | INFO     | end of generic workflow (traces error code: 0)
2025-06-06 23:54:13 (7068): Guest Log: 2025-06-06 11:54:09,929 | INFO     | traces error code: 0
2025-06-06 23:54:13 (7068): Guest Log: 2025-06-06 11:54:09,929 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-06 23:54:13 (7068): Guest Log: 2025-06-06 11:54:09,981 [wrapper] ==== pilot stdout END ====
2025-06-06 23:54:13 (7068): Guest Log: 2025-06-06 11:54:09,984 [wrapper] ==== wrapper stdout RESUME ====
2025-06-06 23:54:13 (7068): Guest Log: 2025-06-06 11:54:09,987 [wrapper] pilotpid: 5854
2025-06-06 23:54:13 (7068): Guest Log: 2025-06-06 11:54:09,990 [wrapper] Pilot exit status: 0
2025-06-06 23:54:13 (7068): Guest Log: 2025-06-06 11:54:10,920 [wrapper] pandaids: 6668325969
2025-06-06 23:54:13 (7068): Guest Log: 2025-06-06 11:54:10,943 [wrapper] cleanup supervisor_pilot 25616 5855
2025-06-06 23:54:13 (7068): Guest Log: 2025-06-06 11:54:10,946 [wrapper] Test setup, not cleaning
2025-06-06 23:54:13 (7068): Guest Log: 2025-06-06 11:54:10,953 [wrapper] apfmon messages muted
2025-06-06 23:54:13 (7068): Guest Log: 2025-06-06 11:54:10,956 [wrapper] ==== wrapper stdout END ====
2025-06-06 23:54:13 (7068): Guest Log: 2025-06-06 11:54:10,959 [wrapper] ==== wrapper stderr END ====
2025-06-06 23:54:13 (7068): Guest Log:  *** Error codes and diagnostics ***
2025-06-06 23:54:13 (7068): Guest Log:     "exeErrorCode": 0,
2025-06-06 23:54:13 (7068): Guest Log:     "exeErrorDiag": "",
2025-06-06 23:54:13 (7068): Guest Log:     "pilotErrorCode": 0,
2025-06-06 23:54:13 (7068): Guest Log:     "pilotErrorDiag": "",
2025-06-06 23:54:13 (7068): Guest Log:  *** Listing of results directory ***
2025-06-06 23:54:13 (7068): Guest Log: total 199160
2025-06-06 23:54:13 (7068): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 28 09:38 pilot3.tar.gz
2025-06-06 23:54:13 (7068): Guest Log: -rwx------. 1 atlas atlas     37140 May 28 09:50 runpilot2-wrapper.sh
2025-06-06 23:54:13 (7068): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 28 09:50 queuedata.json
2025-06-06 23:54:13 (7068): Guest Log: -rwxr-xr-x. 1 atlas atlas      9473 Jun  6 05:01 init_data.xml
2025-06-06 23:54:13 (7068): Guest Log: -rwxr-xr-x. 1 atlas atlas    508876 Jun  6 05:01 input.tar.gz
2025-06-06 23:54:13 (7068): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  6 05:01 start_atlas.sh
2025-06-06 23:54:13 (7068): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  6 05:01 EVNT.44871834._003217.pool.root.1 -> /data/./ATLAS.root_0
2025-06-06 23:54:13 (7068): Guest Log: -rw-r--r--. 1 atlas atlas      2559 Jun  6 05:02 pandaJob.out
2025-06-06 23:54:13 (7068): Guest Log: -rw-------. 1 atlas atlas    988125 Jun  6 05:06 agis_schedconf.cvmfs.json
2025-06-06 23:54:13 (7068): Guest Log: drwx------. 4 atlas atlas      4096 Jun  6 05:07 pilot3
2025-06-06 23:54:13 (7068): Guest Log: -rw-------. 1 atlas atlas 195412795 Jun  6 11:53 HITS.44871837._082435.pool.root.1
2025-06-06 23:54:13 (7068): Guest Log: -rw-------. 1 atlas atlas        95 Jun  6 11:53 pilot_heartbeat.json
2025-06-06 23:54:13 (7068): Guest Log: -rw-------. 1 atlas atlas      1027 Jun  6 11:53 memory_monitor_summary.json
2025-06-06 23:54:13 (7068): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  6 11:53 agis_ddmendpoints.agis.ALL.json
2025-06-06 23:54:13 (7068): Guest Log: -rw-------. 1 atlas atlas    374338 Jun  6 11:53 log.44871837._082435.job.log.tgz.1
2025-06-06 23:54:13 (7068): Guest Log: -rw-------. 1 atlas atlas      7723 Jun  6 11:53 heartbeat.json
2025-06-06 23:54:13 (7068): Guest Log: -rw-------. 1 atlas atlas      4608 Jun  6 11:54 pilotlog.txt
2025-06-06 23:54:13 (7068): Guest Log: -rw-------. 1 atlas atlas   2004668 Jun  6 11:54 log.44871837._082435.job.log.1
2025-06-06 23:54:13 (7068): Guest Log: -rw-------. 1 atlas atlas       357 Jun  6 11:54 output.list
2025-06-06 23:54:13 (7068): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  6 11:54 runtime_log
2025-06-06 23:54:13 (7068): Guest Log: -rw-------. 1 atlas atlas   2396160 Jun  6 11:54 result.tar.gz
2025-06-06 23:54:13 (7068): Guest Log: -rw-r--r--. 1 atlas atlas      8590 Jun  6 11:54 runtime_log.err
2025-06-06 23:54:13 (7068): Guest Log: -rw-------. 1 atlas atlas       656 Jun  6 11:54 aWuNDmQbSe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKrbKDmROTZgm.diag
2025-06-06 23:54:13 (7068): Guest Log: Looking for outputfile HITS.44871837._082435.pool.root.1
2025-06-06 23:54:13 (7068): Guest Log: HITS file was successfully produced
2025-06-06 23:54:13 (7068): Guest Log: -rw-------. 1 atlas atlas 195412795 Jun  6 11:53 /home/atlas/RunAtlas/HITS.44871837._082435.pool.root.1
2025-06-06 23:54:14 (7068): Guest Log: Successfully finished the ATLAS job!
2025-06-06 23:54:14 (7068): Guest Log: Copying the results back to the shared directory!
2025-06-06 23:54:14 (7068): Guest Log:  *** Contents of shared directory: ***
2025-06-06 23:54:14 (7068): Guest Log: total 411436
2025-06-06 23:54:14 (7068): Guest Log: -rwxrwxrwx. 1 root root 222954727 Jun  6 05:01 ATLAS.root_0
2025-06-06 23:54:14 (7068): Guest Log: -rwxrwxrwx. 1 root root 195412795 Jun  6 11:54 HITS.pool.root.1
2025-06-06 23:54:14 (7068): Guest Log: -rwxrwxrwx. 1 root root      9473 Jun  6 05:01 init_data.xml
2025-06-06 23:54:14 (7068): Guest Log: -rwxrwxrwx. 1 root root    508876 Jun  5 15:52 input.tar.gz
2025-06-06 23:54:14 (7068): Guest Log: -rwxrwxrwx. 1 root root   2396160 Jun  6 11:54 result.tar.gz
2025-06-06 23:54:14 (7068): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  5 15:52 start_atlas.sh
2025-06-06 23:54:14 (7068): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-06 23:54:14 (7068): VM Completion File Detected.
2025-06-06 23:54:14 (7068): Powering off VM.
2025-06-06 23:54:15 (7068): Successfully stopped VM.
2025-06-06 23:54:15 (7068): Deregistering VM. (boinc_99c603f5eda18b7c, slot#9)
2025-06-06 23:54:15 (7068): Removing network bandwidth throttle group from VM.
2025-06-06 23:54:15 (7068): Removing VM from VirtualBox.
23:54:21 (7068): called boinc_finish(0)

</stderr_txt>
]]>

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