Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:25:14 (1536283): wrapper (7.7.26015): starting
07:25:14 (1536283): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 07:25:14] Arguments: --nthreads 12
[2025-06-06 07:25:14] Threads: 12
[2025-06-06 07:25:14] Checking for CVMFS
[2025-06-06 07:25:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 07:25:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 07:25:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 07:25:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 07:25:18] 2.12.7.0 16016 4318 63112 146847 2 56 2792724 4096001 912 130560 0 4111112 99.992 1027020 138 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 07:25:18] CVMFS is ok
[2025-06-06 07:25:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 07:25:18] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 07:25:18] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 07:25:18] Further information can be found at the LHC@home message board.
[2025-06-06 07:25:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 07:25:18] Checking for apptainer binary...
[2025-06-06 07:25:18] apptainer is not installed, using version from CVMFS
[2025-06-06 07:25:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 07:25:19] g3250
[2025-06-06 07:25:19] apptainer works
[2025-06-06 07:25:20] Set ATHENA_PROC_NUMBER=12
[2025-06-06 07:25:20] Set ATHENA_CORE_NUMBER=12
[2025-06-06 07:25:20] Starting ATLAS job with PandaID=6668313085
[2025-06-06 07:25:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 11:53:30]  *** The last 200 lines of the pilot log: ***
[2025-06-06 11:53:30] 2025-06-06 11:53:09,266 | INFO     | monitor loop #1183: job 0:6668313085 is in state 'finished'
[2025-06-06 11:53:30] 2025-06-06 11:53:09,267 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 11:53:30] 2025-06-06 11:53:11,778 | INFO     | monitor loop #1184: job 0:6668313085 is in state 'finished'
[2025-06-06 11:53:30] 2025-06-06 11:53:11,782 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 11:53:30] 2025-06-06 11:53:14,293 | INFO     | monitor loop #1185: job 0:6668313085 is in state 'finished'
[2025-06-06 11:53:30] 2025-06-06 11:53:14,293 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 11:53:30] 2025-06-06 11:53:15,587 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 11:53:30] 2025-06-06 11:53:15,587 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6668313085/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 11:53:30] 2025-06-06 11:53:15,588 | INFO     | extracted standard info from prmon json
[2025-06-06 11:53:30] 2025-06-06 11:53:15,588 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 11:53:30] 2025-06-06 11:53:15,588 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 11:53:30] 2025-06-06 11:53:15,588 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 11:53:30] 2025-06-06 11:53:15,588 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 11:53:30] 2025-06-06 11:53:15,601 | INFO     | fitting pss+swap vs Time
[2025-06-06 11:53:30] 2025-06-06 11:53:15,601 | INFO     | sum of square deviations: 5449944045.0
[2025-06-06 11:53:30] 2025-06-06 11:53:15,607 | INFO     | sum of deviations: -109242036294.00002
[2025-06-06 11:53:30] 2025-06-06 11:53:15,607 | INFO     | mean x: 1749202821.5
[2025-06-06 11:53:30] 2025-06-06 11:53:15,607 | INFO     | mean y: 2868988.9
[2025-06-06 11:53:30] 2025-06-06 11:53:15,607 | INFO     | -- intersect: 35064968073.601746
[2025-06-06 11:53:30] 2025-06-06 11:53:15,607 | INFO     | intersect: 35064968073.601746
[2025-06-06 11:53:30] 2025-06-06 11:53:15,608 | INFO     | chi2: 3.2622322633291487
[2025-06-06 11:53:30] 2025-06-06 11:53:15,608 | INFO     | sum of square deviations: 5141528960.0
[2025-06-06 11:53:30] 2025-06-06 11:53:15,610 | INFO     | sum of deviations: -84347864497.00002
[2025-06-06 11:53:30] 2025-06-06 11:53:15,610 | INFO     | mean x: 1749202669.0
[2025-06-06 11:53:30] 2025-06-06 11:53:15,610 | INFO     | mean y: 2881161.937254902
[2025-06-06 11:53:30] 2025-06-06 11:53:15,610 | INFO     | -- intersect: 28698919023.52362
[2025-06-06 11:53:30] 2025-06-06 11:53:15,610 | INFO     | intersect: 28698919023.52362
[2025-06-06 11:53:30] 2025-06-06 11:53:15,622 | INFO     | chi2: 2.568640364498471
[2025-06-06 11:53:30] 2025-06-06 11:53:15,623 | INFO     | current chi2=2.568640364498471 (change=21.261266606530903 %)
[2025-06-06 11:53:30] 2025-06-06 11:53:15,623 | INFO     | right removable region: 254
[2025-06-06 11:53:30] 2025-06-06 11:53:15,623 | INFO     | sum of square deviations: 5141528960.0
[2025-06-06 11:53:30] 2025-06-06 11:53:15,625 | INFO     | sum of deviations: -169301502365.0001
[2025-06-06 11:53:30] 2025-06-06 11:53:15,625 | INFO     | mean x: 1749202974.0
[2025-06-06 11:53:30] 2025-06-06 11:53:15,625 | INFO     | mean y: 2898520.8
[2025-06-06 11:53:30] 2025-06-06 11:53:15,625 | INFO     | -- intersect: 57601074811.05398
[2025-06-06 11:53:30] 2025-06-06 11:53:15,625 | INFO     | intersect: 57601074811.05398
[2025-06-06 11:53:30] 2025-06-06 11:53:15,626 | INFO     | chi2: 1.244001302236531
[2025-06-06 11:53:30] 2025-06-06 11:53:15,626 | INFO     | current chi2=1.244001302236531 (change=61.86656246949713 %)
[2025-06-06 11:53:30] 2025-06-06 11:53:15,626 | INFO     | sum of square deviations: 4844974562.5
[2025-06-06 11:53:30] 2025-06-06 11:53:15,632 | INFO     | sum of deviations: -184070744132.49988
[2025-06-06 11:53:30] 2025-06-06 11:53:15,632 | INFO     | mean x: 1749203126.5
[2025-06-06 11:53:30] 2025-06-06 11:53:15,632 | INFO     | mean y: 2906103.796
[2025-06-06 11:53:30] 2025-06-06 11:53:15,632 | INFO     | -- intersect: 66458801172.0274
[2025-06-06 11:53:30] 2025-06-06 11:53:15,632 | INFO     | intersect: 66458801172.0274
[2025-06-06 11:53:30] 2025-06-06 11:53:15,633 | INFO     | chi2: 1.023366024085711
[2025-06-06 11:53:30] 2025-06-06 11:53:15,633 | INFO     | current chi2=1.023366024085711 (change=17.735936269049745 %)
[2025-06-06 11:53:30] 2025-06-06 11:53:15,633 | INFO     | left removable region: 20
[2025-06-06 11:53:30] 2025-06-06 11:53:15,633 | INFO     | sum of square deviations: 3972995422.5
[2025-06-06 11:53:30] 2025-06-06 11:53:15,647 | INFO     | sum of deviations: -158847124114.99997
[2025-06-06 11:53:30] 2025-06-06 11:53:15,647 | INFO     | mean x: 1749203248.5
[2025-06-06 11:53:30] 2025-06-06 11:53:15,647 | INFO     | mean y: 2921262.9572649575
[2025-06-06 11:53:30] 2025-06-06 11:53:15,647 | INFO     | -- intersect: 69939046520.81128
[2025-06-06 11:53:30] 2025-06-06 11:53:15,647 | INFO     | intersect: 69939046520.81128
[2025-06-06 11:53:30] 2025-06-06 11:53:15,647 | INFO     | chi2: 0.1878166260248575
[2025-06-06 11:53:30] 2025-06-06 11:53:15,648 | INFO     | -- intersect: 69939046520.81128
[2025-06-06 11:53:30] 2025-06-06 11:53:15,648 | INFO     | current memory leak: -39.98 B/s (using 234 data points, chi2=0.19)
[2025-06-06 11:53:30] 2025-06-06 11:53:15,648 | INFO     | ..............................
[2025-06-06 11:53:30] 2025-06-06 11:53:15,648 | INFO     | . Timing measurements:
[2025-06-06 11:53:30] 2025-06-06 11:53:15,648 | INFO     | . get job = 0 s
[2025-06-06 11:53:30] 2025-06-06 11:53:15,649 | INFO     | . initial setup = 3 s
[2025-06-06 11:53:30] 2025-06-06 11:53:15,649 | INFO     | . payload setup = 45 s
[2025-06-06 11:53:30] 2025-06-06 11:53:15,649 | INFO     | . stage-in = 0 s
[2025-06-06 11:53:30] 2025-06-06 11:53:15,649 | INFO     | . payload execution = 15844 s
[2025-06-06 11:53:30] 2025-06-06 11:53:15,649 | INFO     | . stage-out = 2 s
[2025-06-06 11:53:30] 2025-06-06 11:53:15,649 | INFO     | . log creation = 0 s
[2025-06-06 11:53:30] 2025-06-06 11:53:15,649 | INFO     | ..............................
[2025-06-06 11:53:30] 2025-06-06 11:53:15,854 | INFO     | 
[2025-06-06 11:53:30] 2025-06-06 11:53:15,854 | INFO     | job summary report
[2025-06-06 11:53:30] 2025-06-06 11:53:15,855 | INFO     | --------------------------------------------------
[2025-06-06 11:53:30] 2025-06-06 11:53:15,855 | INFO     | PanDA job id: 6668313085
[2025-06-06 11:53:30] 2025-06-06 11:53:15,855 | INFO     | task id: 44871837
[2025-06-06 11:53:30] 2025-06-06 11:53:15,855 | INFO     | errors: (none)
[2025-06-06 11:53:30] 2025-06-06 11:53:15,855 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 11:53:30] 2025-06-06 11:53:15,855 | INFO     | pilot state: finished 
[2025-06-06 11:53:30] 2025-06-06 11:53:15,855 | INFO     | transexitcode: 0
[2025-06-06 11:53:30] 2025-06-06 11:53:15,855 | INFO     | exeerrorcode: 0
[2025-06-06 11:53:30] 2025-06-06 11:53:15,855 | INFO     | exeerrordiag: 
[2025-06-06 11:53:30] 2025-06-06 11:53:15,855 | INFO     | exitcode: 0
[2025-06-06 11:53:30] 2025-06-06 11:53:15,855 | INFO     | exitmsg: OK
[2025-06-06 11:53:30] 2025-06-06 11:53:15,855 | INFO     | cpuconsumptiontime: 55171 s
[2025-06-06 11:53:30] 2025-06-06 11:53:15,856 | INFO     | nevents: 400
[2025-06-06 11:53:30] 2025-06-06 11:53:15,856 | INFO     | neventsw: 0
[2025-06-06 11:53:30] 2025-06-06 11:53:15,856 | INFO     | pid: 1546361
[2025-06-06 11:53:30] 2025-06-06 11:53:15,856 | INFO     | pgrp: 1546361
[2025-06-06 11:53:30] 2025-06-06 11:53:15,856 | INFO     | corecount: 12
[2025-06-06 11:53:30] 2025-06-06 11:53:15,856 | INFO     | event service: False
[2025-06-06 11:53:30] 2025-06-06 11:53:15,856 | INFO     | sizes: {0: 2397244, 1: 2397443, 12: 2397443, 23: 2397471, 30: 2397705, 33: 2397733, 15893: 2428756, 15896: 2437799, 15952: 2437913}
[2025-06-06 11:53:30] 2025-06-06 11:53:15,856 | INFO     | --------------------------------------------------
[2025-06-06 11:53:30] 2025-06-06 11:53:15,856 | INFO     | 
[2025-06-06 11:53:30] 2025-06-06 11:53:15,856 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-06 11:53:30] 2025-06-06 11:53:15,907 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 11:53:30] 2025-06-06 11:53:15,907 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 11:53:30] 2025-06-06 11:53:15,907 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 11:53:30] 2025-06-06 11:53:15,907 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 11:53:30] 2025-06-06 11:53:15,907 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 11:53:30] 2025-06-06 11:53:15,907 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 11:53:30] 2025-06-06 11:53:15,907 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 11:53:30] 2025-06-06 11:53:15,907 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 11:53:30] 2025-06-06 11:53:15,907 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 11:53:30] 2025-06-06 11:53:15,908 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 11:53:30] 2025-06-06 11:53:15,908 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 11:53:30] 2025-06-06 11:53:15,908 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 11:53:30] 2025-06-06 11:53:15,908 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 11:53:30] 2025-06-06 11:53:15,908 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 11:53:30] 2025-06-06 11:53:15,908 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 11:53:30] 2025-06-06 11:53:15,908 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 11:53:30] 2025-06-06 11:53:15,908 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 11:53:30] 2025-06-06 11:53:15,908 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 11:53:30] 2025-06-06 11:53:15,908 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 11:53:30] 2025-06-06 11:53:15,908 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 11:53:30] 2025-06-06 11:53:15,908 | INFO     | job 6668313085 has completed (purged errors)
[2025-06-06 11:53:30] 2025-06-06 11:53:15,909 | INFO     | overall cleanup function is called
[2025-06-06 11:53:30] 2025-06-06 11:53:16,918 | INFO     | --- collectZombieJob: --- 10, [1546361]
[2025-06-06 11:53:30] 2025-06-06 11:53:16,919 | INFO     | zombie collector waiting for pid 1546361
[2025-06-06 11:53:30] 2025-06-06 11:53:16,919 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 11:53:30] 2025-06-06 11:53:16,919 | INFO     | collected zombie processes
[2025-06-06 11:53:30] 2025-06-06 11:53:16,919 | INFO     | will attempt to kill all subprocesses of pid=1546361
[2025-06-06 11:53:30] 2025-06-06 11:53:17,022 | INFO     | process IDs to be killed: [1546361] (in reverse order)
[2025-06-06 11:53:30] 2025-06-06 11:53:17,051 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 11:53:30] 2025-06-06 11:53:17,051 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 11:53:30] 2025-06-06 11:53:17,053 | INFO     | did not find any defunct processes belonging to 1546361
[2025-06-06 11:53:30] 2025-06-06 11:53:17,063 | INFO     | did not find any defunct processes belonging to 1546361
[2025-06-06 11:53:30] 2025-06-06 11:53:17,063 | INFO     | ready for new job
[2025-06-06 11:53:30] 2025-06-06 11:53:17,063 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 11:53:30] 2025-06-06 11:53:17,064 | INFO     | **************************************
[2025-06-06 11:53:30] 2025-06-06 11:53:17,064 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 11:53:30] 2025-06-06 11:53:17,064 | INFO     | **************************************
[2025-06-06 11:53:30] 2025-06-06 11:53:17,064 | INFO     | 
[2025-06-06 11:53:30] 2025-06-06 11:53:17,087 | INFO     | architecture information:
[2025-06-06 11:53:30] 2025-06-06 11:53:17,087 | INFO     | executing command: cat /etc/os-release
[2025-06-06 11:53:30] 2025-06-06 11:53:17,115 | INFO     | cat /etc/os-release:
[2025-06-06 11:53:30] NAME="CentOS Linux"
[2025-06-06 11:53:30] VERSION="7 (Core)"
[2025-06-06 11:53:30] ID="centos"
[2025-06-06 11:53:30] ID_LIKE="rhel fedora"
[2025-06-06 11:53:30] VERSION_ID="7"
[2025-06-06 11:53:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 11:53:30] ANSI_COLOR="0;31"
[2025-06-06 11:53:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 11:53:30] HOME_URL="https://www.centos.org/"
[2025-06-06 11:53:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 11:53:30] 
[2025-06-06 11:53:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 11:53:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 11:53:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 11:53:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 11:53:30] 
[2025-06-06 11:53:30] 2025-06-06 11:53:17,115 | INFO     | **************************************
[2025-06-06 11:53:30] 2025-06-06 11:53:17,623 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-06 11:53:30] 2025-06-06 11:53:17,639 | INFO     | sufficient remaining disk space (31462522880 B)
[2025-06-06 11:53:30] 2025-06-06 11:53:17,639 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 11:53:30] 2025-06-06 11:53:17,640 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 11:53:30] 2025-06-06 11:53:17,640 | INFO     | update_server=False
[2025-06-06 11:53:30] 2025-06-06 11:53:17,640 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 11:53:30] 2025-06-06 11:53:17,640 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 11:53:30] 2025-06-06 11:53:17,640 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 11:53:30] 2025-06-06 11:53:17,818 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 11:53:30] 2025-06-06 11:53:17,819 | INFO     | aborting loop
[2025-06-06 11:53:30] 2025-06-06 11:53:18,150 | INFO     | all data control threads have been joined
[2025-06-06 11:53:30] 2025-06-06 11:53:18,372 | INFO     | PID=1539897 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 11:53:30] 2025-06-06 11:53:18,372 | INFO     | .. there are 2 such processes running
[2025-06-06 11:53:30] 2025-06-06 11:53:18,372 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 11:53:30] 2025-06-06 11:53:18,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 11:53:30] 2025-06-06 11:53:18,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 11:53:30] 2025-06-06 11:53:18,643 | INFO     | [job] retrieve thread has finished
[2025-06-06 11:53:30] 2025-06-06 11:53:18,643 | INFO     | [job] queue monitor thread has finished
[2025-06-06 11:53:30] 2025-06-06 11:53:18,783 | INFO     | [data] copytool_in thread has finished
[2025-06-06 11:53:30] 2025-06-06 11:53:18,823 | INFO     | [job] job monitor thread has finished
[2025-06-06 11:53:30] 2025-06-06 11:53:18,842 | INFO     | all job control threads have been joined
[2025-06-06 11:53:30] 2025-06-06 11:53:18,946 | INFO     | all payload control threads have been joined
[2025-06-06 11:53:30] 2025-06-06 11:53:19,139 | INFO     | [payload] validate_post thread has finished
[2025-06-06 11:53:30] 2025-06-06 11:53:19,155 | INFO     | [data] control thread has finished
[2025-06-06 11:53:30] 2025-06-06 11:53:19,335 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 11:53:30] 2025-06-06 11:53:19,587 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 11:53:30] 2025-06-06 11:53:19,651 | INFO     | [data] copytool_out thread has finished
[2025-06-06 11:53:30] 2025-06-06 11:53:19,682 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 11:53:30] 2025-06-06 11:53:19,758 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 11:53:30] 2025-06-06 11:53:19,846 | INFO     | [job] control thread has finished
[2025-06-06 11:53:30] 2025-06-06 11:53:19,914 | INFO     | [payload] failed_post thread has finished
[2025-06-06 11:53:30] 2025-06-06 11:53:19,950 | INFO     | [payload] control thread has finished
[2025-06-06 11:53:30] 2025-06-06 11:53:20,063 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 11:53:30] 2025-06-06 11:53:20,063 | INFO     | [job] validate thread has finished
[2025-06-06 11:53:30] 2025-06-06 11:53:23,698 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 11:53:30] 2025-06-06 11:53:24,494 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140137861748544)>', '<ExcThread(monitor, started 140137551861504)>']
[2025-06-06 11:53:30] 2025-06-06 11:53:25,398 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 11:53:30] 2025-06-06 11:53:25,399 | INFO     | [monitor] control thread has ended
[2025-06-06 11:53:30] 2025-06-06 11:53:29,518 | INFO     | all workflow threads have been joined
[2025-06-06 11:53:30] 2025-06-06 11:53:29,519 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 11:53:30] 2025-06-06 11:53:29,519 | INFO     | traces error code: 0
[2025-06-06 11:53:30] 2025-06-06 11:53:29,519 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 11:53:30] 2025-06-06 11:53:29,814 [wrapper] ==== pilot stdout END ====
[2025-06-06 11:53:30] 2025-06-06 11:53:29,839 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 11:53:30] 2025-06-06 11:53:29,859 [wrapper] pilotpid: 1539897
[2025-06-06 11:53:30] 2025-06-06 11:53:29,879 [wrapper] Pilot exit status: 0
[2025-06-06 11:53:30] 2025-06-06 11:53:30,020 [wrapper] pandaids: 6668313085
[2025-06-06 11:53:30] 2025-06-06 11:53:30,092 [wrapper] cleanup supervisor_pilot 1608315 1539898
[2025-06-06 11:53:30] 2025-06-06 11:53:30,112 [wrapper] Test setup, not cleaning
[2025-06-06 11:53:30] 2025-06-06 11:53:30,142 [wrapper] apfmon messages muted
[2025-06-06 11:53:30] 2025-06-06 11:53:30,182 [wrapper] ==== wrapper stdout END ====
[2025-06-06 11:53:30] 2025-06-06 11:53:30,215 [wrapper] ==== wrapper stderr END ====
[2025-06-06 11:53:30]  *** Error codes and diagnostics ***
[2025-06-06 11:53:30]     "exeErrorCode": 0,
[2025-06-06 11:53:30]     "exeErrorDiag": "",
[2025-06-06 11:53:30]     "pilotErrorCode": 0,
[2025-06-06 11:53:30]     "pilotErrorDiag": "",
[2025-06-06 11:53:30]  *** Listing of results directory ***
[2025-06-06 11:53:30] total 422452
[2025-06-06 11:53:30] -rw-r--r-- 1 boinc boinc    495897 May 28 09:38 pilot3.tar.gz
[2025-06-06 11:53:30] -rw-r--r-- 1 boinc boinc      5111 May 28 09:40 queuedata.json
[2025-06-06 11:53:30] -rwx------ 1 boinc boinc     37140 May 28 09:41 runpilot2-wrapper.sh
[2025-06-06 11:53:30] -rw-rw-r-- 1 boinc boinc       100 Jun  6 07:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 11:53:30] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 07:25 run_atlas
[2025-06-06 11:53:30] -rw-rw-r-- 1 boinc boinc       105 Jun  6 07:25 job.xml
[2025-06-06 11:53:30] -rw-r--r-- 2 boinc boinc     15093 Jun  6 07:25 start_atlas.sh
[2025-06-06 11:53:30] drwxrwx--x 2 boinc boinc      4096 Jun  6 07:25 shared
[2025-06-06 11:53:30] -rw-r--r-- 2 boinc boinc    508878 Jun  6 07:25 input.tar.gz
[2025-06-06 11:53:30] -rw-rw-r-- 1 boinc boinc      9357 Jun  6 07:25 init_data.xml
[2025-06-06 11:53:30] -rw-r--r-- 2 boinc boinc 224550763 Jun  6 07:25 EVNT.44871834._003207.pool.root.1
[2025-06-06 11:53:30] -rw-rw-r-- 1 boinc boinc         0 Jun  6 07:25 boinc_lockfile
[2025-06-06 11:53:30] -rw-rw-r-- 1 boinc boinc      2559 Jun  6 07:25 pandaJob.out
[2025-06-06 11:53:30] -rw------- 1 boinc boinc    987967 Jun  6 07:26 agis_schedconf.cvmfs.json
[2025-06-06 11:53:30] drwx------ 4 boinc boinc      4096 Jun  6 07:26 pilot3
[2025-06-06 11:53:30] -rw------- 1 boinc boinc 200265317 Jun  6 11:51 HITS.44871837._082175.pool.root.1
[2025-06-06 11:53:30] -rw-rw-r-- 1 boinc boinc       530 Jun  6 11:51 boinc_task_state.xml
[2025-06-06 11:53:30] -rw------- 1 boinc boinc      1020 Jun  6 11:52 memory_monitor_summary.json
[2025-06-06 11:53:30] -rw------- 1 boinc boinc   1598969 Jun  6 11:52 agis_ddmendpoints.agis.ALL.json
[2025-06-06 11:53:30] -rw------- 1 boinc boinc    469520 Jun  6 11:52 log.44871837._082175.job.log.tgz.1
[2025-06-06 11:53:30] -rw------- 1 boinc boinc        95 Jun  6 11:52 pilot_heartbeat.json
[2025-06-06 11:53:30] -rw-rw-r-- 1 boinc boinc        28 Jun  6 11:53 wrapper_checkpoint.txt
[2025-06-06 11:53:30] -rw-rw-r-- 1 boinc boinc      8192 Jun  6 11:53 boinc_mmap_file
[2025-06-06 11:53:30] -rw------- 1 boinc boinc      7666 Jun  6 11:53 heartbeat.json
[2025-06-06 11:53:30] -rw------- 1 boinc boinc      4770 Jun  6 11:53 pilotlog.txt
[2025-06-06 11:53:30] -rw------- 1 boinc boinc   1502234 Jun  6 11:53 log.44871837._082175.job.log.1
[2025-06-06 11:53:30] -rw------- 1 boinc boinc       357 Jun  6 11:53 output.list
[2025-06-06 11:53:30] -rw-rw-r-- 1 boinc boinc       620 Jun  6 11:53 runtime_log
[2025-06-06 11:53:30] -rw------- 1 boinc boinc   1986560 Jun  6 11:53 result.tar.gz
[2025-06-06 11:53:30] -rw-rw-r-- 1 boinc boinc      8949 Jun  6 11:53 runtime_log.err
[2025-06-06 11:53:30] -rw------- 1 boinc boinc       653 Jun  6 11:53 neyNDm2SSe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMobKDmqmJipm.diag
[2025-06-06 11:53:30] -rw-rw-r-- 1 boinc boinc     21318 Jun  6 11:53 stderr.txt
[2025-06-06 11:53:30] HITS file was successfully produced:
[2025-06-06 11:53:30] -rw------- 1 boinc boinc 200265317 Jun  6 11:51 shared/HITS.pool.root.1
[2025-06-06 11:53:30]  *** Contents of shared directory: ***
[2025-06-06 11:53:31] total 417324
[2025-06-06 11:53:31] -rw-r--r-- 2 boinc boinc     15093 Jun  6 07:25 start_atlas.sh
[2025-06-06 11:53:31] -rw-r--r-- 2 boinc boinc    508878 Jun  6 07:25 input.tar.gz
[2025-06-06 11:53:31] -rw-r--r-- 2 boinc boinc 224550763 Jun  6 07:25 ATLAS.root_0
[2025-06-06 11:53:31] -rw------- 1 boinc boinc 200265317 Jun  6 11:51 HITS.pool.root.1
[2025-06-06 11:53:31] -rw------- 1 boinc boinc   1986560 Jun  6 11:53 result.tar.gz
11:53:32 (1536283): run_atlas exited; CPU time 55284.798872
11:53:32 (1536283): called boinc_finish(0)

</stderr_txt>
]]>

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