Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
17:54:00 (890217): wrapper (7.7.26015): starting
17:54:00 (890217): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 17:54:00] Arguments: --nthreads 4
[2025-06-05 17:54:00] Threads: 4
[2025-06-05 17:54:00] Checking for CVMFS
[2025-06-05 17:54:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 17:54:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 17:54:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 17:54:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 17:54:01] 2.13.0.0 889978 8 25380 146825 3 3 9700781 10240000 1 130560 0 5 88.312 24231 50 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 17:54:01] CVMFS is ok
[2025-06-05 17:54:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 17:54:01] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 17:54:01] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 17:54:01] Further information can be found at the LHC@home message board.
[2025-06-05 17:54:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 17:54:01] Checking for apptainer binary...
[2025-06-05 17:54:01] apptainer is not installed, using version from CVMFS
[2025-06-05 17:54:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 17:56:32] Ryze
[2025-06-05 17:56:32] apptainer works
[2025-06-05 17:56:32] Set ATHENA_PROC_NUMBER=4
[2025-06-05 17:56:32] Set ATHENA_CORE_NUMBER=4
[2025-06-05 17:56:32] Starting ATLAS job with PandaID=6668313500
[2025-06-05 17:56:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 23:40:26]  *** The last 200 lines of the pilot log: ***
[2025-06-05 23:40:26] 2025-06-05 21:40:03,585 | INFO     | preparing for final server update for job 6668313500 in state='finished'
[2025-06-05 23:40:26] 2025-06-05 21:40:03,585 | INFO     | this job has now completed (state=finished)
[2025-06-05 23:40:26] 2025-06-05 21:40:03,585 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 23:40:26] 2025-06-05 21:40:03,585 | INFO     | log transfer has been attempted: DONE
[2025-06-05 23:40:26] 2025-06-05 21:40:03,585 | INFO     | job 6668313500 has finished - writing final server update
[2025-06-05 23:40:26] 2025-06-05 21:40:03,585 | INFO     | total number of processed events: 400 (read)
[2025-06-05 23:40:26] 2025-06-05 21:40:03,586 | INFO     | executing command: lscpu
[2025-06-05 23:40:26] 2025-06-05 21:40:03,606 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 23:40:26] 2025-06-05 21:40:04,966 | WARNING  | process 944123 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 23:40:26] 2025-06-05 21:40:04,967 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6668313500/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 23:40:26] 2025-06-05 21:40:05,050 | INFO     | number of running child processes to parent process 944123: 1
[2025-06-05 23:40:26] 2025-06-05 21:40:05,050 | INFO     | maximum number of monitored processes: 9
[2025-06-05 23:40:26] 2025-06-05 21:40:05,814 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 23:40:26] 2025-06-05 21:40:05,814 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6668313500/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 23:40:26] 2025-06-05 21:40:05,815 | INFO     | extracted standard info from prmon json
[2025-06-05 23:40:26] 2025-06-05 21:40:05,815 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 23:40:26] 2025-06-05 21:40:05,815 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 23:40:26] 2025-06-05 21:40:05,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 23:40:26] 2025-06-05 21:40:05,815 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 23:40:26] 2025-06-05 21:40:05,817 | INFO     | fitting pss+swap vs Time
[2025-06-05 23:40:26] 2025-06-05 21:40:05,817 | INFO     | sum of square deviations: 6239923508.0
[2025-06-05 23:40:26] 2025-06-05 21:40:05,818 | INFO     | sum of deviations: 912531732844.0
[2025-06-05 23:40:26] 2025-06-05 21:40:05,818 | INFO     | mean x: 1749151330.5
[2025-06-05 23:40:26] 2025-06-05 21:40:05,818 | INFO     | mean y: 1692825.455882353
[2025-06-05 23:40:26] 2025-06-05 21:40:05,818 | INFO     | -- intersect: -255795688758.01614
[2025-06-05 23:40:26] 2025-06-05 21:40:05,818 | INFO     | intersect: -255795688758.01614
[2025-06-05 23:40:26] 2025-06-05 21:40:05,818 | INFO     | chi2: 27.87562651312046
[2025-06-05 23:40:26] 2025-06-05 21:40:05,819 | INFO     | sum of square deviations: 5902093918.0
[2025-06-05 23:40:26] 2025-06-05 21:40:05,819 | INFO     | sum of deviations: 903185746920.0
[2025-06-05 23:40:26] 2025-06-05 21:40:05,820 | INFO     | mean x: 1749151178.0
[2025-06-05 23:40:26] 2025-06-05 21:40:05,820 | INFO     | mean y: 1688492.6666666667
[2025-06-05 23:40:26] 2025-06-05 21:40:05,820 | INFO     | -- intersect: -267667453192.77542
[2025-06-05 23:40:26] 2025-06-05 21:40:05,820 | INFO     | intersect: -267667453192.77542
[2025-06-05 23:40:26] 2025-06-05 21:40:05,820 | INFO     | chi2: 25.984160592430758
[2025-06-05 23:40:26] 2025-06-05 21:40:05,820 | INFO     | current chi2=25.984160592430758 (change=6.785375459810485 %)
[2025-06-05 23:40:26] 2025-06-05 21:40:05,820 | INFO     | right removable region: 266
[2025-06-05 23:40:26] 2025-06-05 21:40:05,820 | INFO     | sum of square deviations: 5902093918.0
[2025-06-05 23:40:26] 2025-06-05 21:40:05,821 | INFO     | sum of deviations: 842763700386.9999
[2025-06-05 23:40:26] 2025-06-05 21:40:05,821 | INFO     | mean x: 1749151483.0
[2025-06-05 23:40:26] 2025-06-05 21:40:05,821 | INFO     | mean y: 1724321.2397003744
[2025-06-05 23:40:26] 2025-06-05 21:40:05,821 | INFO     | -- intersect: -249760715387.6176
[2025-06-05 23:40:26] 2025-06-05 21:40:05,821 | INFO     | intersect: -249760715387.6176
[2025-06-05 23:40:26] 2025-06-05 21:40:05,821 | INFO     | chi2: 23.437593826302134
[2025-06-05 23:40:26] 2025-06-05 21:40:05,821 | INFO     | current chi2=23.437593826302134 (change=15.920835661682576 %)
[2025-06-05 23:40:26] 2025-06-05 21:40:05,821 | INFO     | left removable region: 10
[2025-06-05 23:40:26] 2025-06-05 21:40:05,822 | INFO     | sum of square deviations: 5202255680.0
[2025-06-05 23:40:26] 2025-06-05 21:40:05,822 | INFO     | sum of deviations: 763311846865.0
[2025-06-05 23:40:26] 2025-06-05 21:40:05,822 | INFO     | mean x: 1749151452.5
[2025-06-05 23:40:26] 2025-06-05 21:40:05,822 | INFO     | mean y: 1750847.578125
[2025-06-05 23:40:26] 2025-06-05 21:40:05,822 | INFO     | -- intersect: -256646154942.08353
[2025-06-05 23:40:26] 2025-06-05 21:40:05,823 | INFO     | intersect: -256646154942.08353
[2025-06-05 23:40:26] 2025-06-05 21:40:05,823 | INFO     | chi2: 17.59996663261172
[2025-06-05 23:40:26] 2025-06-05 21:40:05,823 | INFO     | -- intersect: -256646154942.08353
[2025-06-05 23:40:26] 2025-06-05 21:40:05,823 | INFO     | current memory leak: 146.73 B/s (using 256 data points, chi2=17.60)
[2025-06-05 23:40:26] 2025-06-05 21:40:05,823 | INFO     | ..............................
[2025-06-05 23:40:26] 2025-06-05 21:40:05,823 | INFO     | . Timing measurements:
[2025-06-05 23:40:26] 2025-06-05 21:40:05,823 | INFO     | . get job = 0 s
[2025-06-05 23:40:26] 2025-06-05 21:40:05,823 | INFO     | . initial setup = 105 s
[2025-06-05 23:40:26] 2025-06-05 21:40:05,823 | INFO     | . payload setup = 1040 s
[2025-06-05 23:40:26] 2025-06-05 21:40:05,823 | INFO     | . stage-in = 1 s
[2025-06-05 23:40:26] 2025-06-05 21:40:05,823 | INFO     | . payload execution = 16542 s
[2025-06-05 23:40:26] 2025-06-05 21:40:05,823 | INFO     | . stage-out = 1 s
[2025-06-05 23:40:26] 2025-06-05 21:40:05,823 | INFO     | . log creation = 0 s
[2025-06-05 23:40:26] 2025-06-05 21:40:05,823 | INFO     | ..............................
[2025-06-05 23:40:26] 2025-06-05 21:40:05,868 | INFO     | 
[2025-06-05 23:40:26] 2025-06-05 21:40:05,868 | INFO     | job summary report
[2025-06-05 23:40:26] 2025-06-05 21:40:05,868 | INFO     | --------------------------------------------------
[2025-06-05 23:40:26] 2025-06-05 21:40:05,868 | INFO     | PanDA job id: 6668313500
[2025-06-05 23:40:26] 2025-06-05 21:40:05,868 | INFO     | task id: 44871837
[2025-06-05 23:40:26] 2025-06-05 21:40:05,868 | INFO     | errors: (none)
[2025-06-05 23:40:26] 2025-06-05 21:40:05,868 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 23:40:26] 2025-06-05 21:40:05,868 | INFO     | pilot state: finished 
[2025-06-05 23:40:26] 2025-06-05 21:40:05,868 | INFO     | transexitcode: 0
[2025-06-05 23:40:26] 2025-06-05 21:40:05,868 | INFO     | exeerrorcode: 0
[2025-06-05 23:40:26] 2025-06-05 21:40:05,869 | INFO     | exeerrordiag: 
[2025-06-05 23:40:26] 2025-06-05 21:40:05,869 | INFO     | exitcode: 0
[2025-06-05 23:40:26] 2025-06-05 21:40:05,869 | INFO     | exitmsg: OK
[2025-06-05 23:40:26] 2025-06-05 21:40:05,869 | INFO     | cpuconsumptiontime: 34430 s
[2025-06-05 23:40:26] 2025-06-05 21:40:05,869 | INFO     | nevents: 400
[2025-06-05 23:40:26] 2025-06-05 21:40:05,869 | INFO     | neventsw: 0
[2025-06-05 23:40:26] 2025-06-05 21:40:05,869 | INFO     | pid: 944123
[2025-06-05 23:40:26] 2025-06-05 21:40:05,869 | INFO     | pgrp: 944123
[2025-06-05 23:40:26] 2025-06-05 21:40:05,869 | INFO     | corecount: 4
[2025-06-05 23:40:26] 2025-06-05 21:40:05,869 | INFO     | event service: False
[2025-06-05 23:40:26] 2025-06-05 21:40:05,869 | INFO     | sizes: {0: 2396564, 6: 2397172, 7: 2397455, 16: 2397661, 18: 2397689, 17586: 2429331, 17588: 2438342, 17592: 2438456}
[2025-06-05 23:40:26] 2025-06-05 21:40:05,869 | INFO     | --------------------------------------------------
[2025-06-05 23:40:26] 2025-06-05 21:40:05,869 | INFO     | 
[2025-06-05 23:40:26] 2025-06-05 21:40:05,869 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-06-05 23:40:26] 2025-06-05 21:40:05,881 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 23:40:26] 2025-06-05 21:40:05,881 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 23:40:26] 2025-06-05 21:40:05,881 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 23:40:26] 2025-06-05 21:40:05,882 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 23:40:26] 2025-06-05 21:40:05,882 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 23:40:26] 2025-06-05 21:40:05,882 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 23:40:26] 2025-06-05 21:40:05,882 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 23:40:26] 2025-06-05 21:40:05,882 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 23:40:26] 2025-06-05 21:40:05,882 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 23:40:26] 2025-06-05 21:40:05,882 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 23:40:26] 2025-06-05 21:40:05,882 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 23:40:26] 2025-06-05 21:40:05,882 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 23:40:26] 2025-06-05 21:40:05,882 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 23:40:26] 2025-06-05 21:40:05,882 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 23:40:26] 2025-06-05 21:40:05,882 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 23:40:26] 2025-06-05 21:40:05,882 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 23:40:26] 2025-06-05 21:40:05,882 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 23:40:26] 2025-06-05 21:40:05,882 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 23:40:26] 2025-06-05 21:40:05,882 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 23:40:26] 2025-06-05 21:40:05,882 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 23:40:26] 2025-06-05 21:40:05,883 | INFO     | job 6668313500 has completed (purged errors)
[2025-06-05 23:40:26] 2025-06-05 21:40:05,883 | INFO     | overall cleanup function is called
[2025-06-05 23:40:26] 2025-06-05 21:40:06,889 | INFO     | --- collectZombieJob: --- 10, [944123]
[2025-06-05 23:40:26] 2025-06-05 21:40:06,890 | INFO     | zombie collector waiting for pid 944123
[2025-06-05 23:40:26] 2025-06-05 21:40:06,890 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 23:40:26] 2025-06-05 21:40:06,890 | INFO     | collected zombie processes
[2025-06-05 23:40:26] 2025-06-05 21:40:06,890 | INFO     | will attempt to kill all subprocesses of pid=944123
[2025-06-05 23:40:26] 2025-06-05 21:40:06,973 | INFO     | process IDs to be killed: [944123] (in reverse order)
[2025-06-05 23:40:26] 2025-06-05 21:40:07,007 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 23:40:26] 2025-06-05 21:40:07,007 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 23:40:26] 2025-06-05 21:40:07,010 | INFO     | did not find any defunct processes belonging to 944123
[2025-06-05 23:40:26] 2025-06-05 21:40:07,012 | INFO     | did not find any defunct processes belonging to 944123
[2025-06-05 23:40:26] 2025-06-05 21:40:07,012 | INFO     | ready for new job
[2025-06-05 23:40:26] 2025-06-05 21:40:07,012 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 23:40:26] 2025-06-05 21:40:07,014 | INFO     | **************************************
[2025-06-05 23:40:26] 2025-06-05 21:40:07,014 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 23:40:26] 2025-06-05 21:40:07,014 | INFO     | **************************************
[2025-06-05 23:40:26] 2025-06-05 21:40:07,014 | INFO     | 
[2025-06-05 23:40:26] 2025-06-05 21:40:07,014 | INFO     | architecture information:
[2025-06-05 23:40:26] 2025-06-05 21:40:07,015 | INFO     | executing command: cat /etc/os-release
[2025-06-05 23:40:26] 2025-06-05 21:40:07,024 | INFO     | cat /etc/os-release:
[2025-06-05 23:40:26] NAME="CentOS Linux"
[2025-06-05 23:40:26] VERSION="7 (Core)"
[2025-06-05 23:40:26] ID="centos"
[2025-06-05 23:40:26] ID_LIKE="rhel fedora"
[2025-06-05 23:40:26] VERSION_ID="7"
[2025-06-05 23:40:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 23:40:26] ANSI_COLOR="0;31"
[2025-06-05 23:40:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 23:40:26] HOME_URL="https://www.centos.org/"
[2025-06-05 23:40:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 23:40:26] 
[2025-06-05 23:40:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 23:40:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 23:40:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 23:40:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 23:40:26] 
[2025-06-05 23:40:26] 2025-06-05 21:40:07,024 | INFO     | **************************************
[2025-06-05 23:40:26] 2025-06-05 21:40:07,527 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-06-05 23:40:26] 2025-06-05 21:40:07,538 | INFO     | sufficient remaining disk space (733121347584 B)
[2025-06-05 23:40:26] 2025-06-05 21:40:07,539 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 23:40:26] 2025-06-05 21:40:07,539 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 23:40:26] 2025-06-05 21:40:07,539 | INFO     | update_server=False
[2025-06-05 23:40:26] 2025-06-05 21:40:07,539 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 23:40:26] 2025-06-05 21:40:07,539 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 23:40:26] 2025-06-05 21:40:07,539 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 23:40:26] 2025-06-05 21:40:07,539 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 23:40:26] 2025-06-05 21:40:07,539 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 23:40:26] 2025-06-05 21:40:07,540 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 23:40:26] 2025-06-05 21:40:07,552 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 23:40:26] 2025-06-05 21:40:07,553 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 23:40:26] 2025-06-05 21:40:07,553 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 23:40:26] 2025-06-05 21:40:07,553 | INFO     | will abort loop
[2025-06-05 23:40:26] 2025-06-05 21:40:07,583 | INFO     | all job control threads have been joined
[2025-06-05 23:40:26] 2025-06-05 21:40:07,711 | INFO     | all payload control threads have been joined
[2025-06-05 23:40:26] 2025-06-05 21:40:07,824 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 23:40:26] 2025-06-05 21:40:08,390 | INFO     | all data control threads have been joined
[2025-06-05 23:40:26] 2025-06-05 21:40:08,487 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 23:40:26] 2025-06-05 21:40:08,544 | INFO     | [job] retrieve thread has finished
[2025-06-05 23:40:26] 2025-06-05 21:40:08,544 | INFO     | [job] queue monitor thread has finished
[2025-06-05 23:40:26] 2025-06-05 21:40:08,558 | INFO     | [job] job monitor thread has finished
[2025-06-05 23:40:26] 2025-06-05 21:40:08,589 | INFO     | [job] control thread has finished
[2025-06-05 23:40:26] 2025-06-05 21:40:08,717 | INFO     | [payload] control thread has finished
[2025-06-05 23:40:26] 2025-06-05 21:40:08,978 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 23:40:26] 2025-06-05 21:40:09,396 | INFO     | [data] control thread has finished
[2025-06-05 23:40:26] 2025-06-05 21:40:09,524 | INFO     | [payload] validate_post thread has finished
[2025-06-05 23:40:26] 2025-06-05 21:40:09,553 | INFO     | [job] validate thread has finished
[2025-06-05 23:40:26] 2025-06-05 21:40:09,754 | INFO     | [payload] failed_post thread has finished
[2025-06-05 23:40:26] 2025-06-05 21:40:09,771 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 23:40:26] 2025-06-05 21:40:09,829 | INFO     | [data] copytool_out thread has finished
[2025-06-05 23:40:26] 2025-06-05 21:40:09,857 | INFO     | [data] copytool_in thread has finished
[2025-06-05 23:40:26] 2025-06-05 21:40:09,862 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 23:40:26] 2025-06-05 21:40:12,492 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 23:40:26] 2025-06-05 21:40:18,085 | INFO     | job.realtimelogging is not enabled
[2025-06-05 23:40:26] 2025-06-05 21:40:19,090 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 23:40:26] 2025-06-05 21:40:21,051 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135878307632960)>', '<ExcThread(monitor, started 135877766395648)>']
[2025-06-05 23:40:26] 2025-06-05 21:40:21,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 23:40:26] 2025-06-05 21:40:21,610 | INFO     | [monitor] control thread has ended
[2025-06-05 23:40:26] 2025-06-05 21:40:26,075 | INFO     | all workflow threads have been joined
[2025-06-05 23:40:26] 2025-06-05 21:40:26,076 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 23:40:26] 2025-06-05 21:40:26,076 | INFO     | traces error code: 0
[2025-06-05 23:40:26] 2025-06-05 21:40:26,076 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 23:40:26] 2025-06-05 21:40:26,129 [wrapper] ==== pilot stdout END ====
[2025-06-05 23:40:26] 2025-06-05 21:40:26,130 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 23:40:26] 2025-06-05 21:40:26,132 [wrapper] pilotpid: 910704
[2025-06-05 23:40:26] 2025-06-05 21:40:26,134 [wrapper] Pilot exit status: 0
[2025-06-05 23:40:26] 2025-06-05 21:40:26,138 [wrapper] pandaids: 6668313500
[2025-06-05 23:40:26] 2025-06-05 21:40:26,159 [wrapper] cleanup supervisor_pilot 1078968 910707
[2025-06-05 23:40:26] 2025-06-05 21:40:26,160 [wrapper] Test setup, not cleaning
[2025-06-05 23:40:26] 2025-06-05 21:40:26,162 [wrapper] apfmon messages muted
[2025-06-05 23:40:26] 2025-06-05 21:40:26,163 [wrapper] ==== wrapper stdout END ====
[2025-06-05 23:40:26] 2025-06-05 21:40:26,165 [wrapper] ==== wrapper stderr END ====
[2025-06-05 23:40:26]  *** Error codes and diagnostics ***
[2025-06-05 23:40:26]     "exeErrorCode": 0,
[2025-06-05 23:40:26]     "exeErrorDiag": "",
[2025-06-05 23:40:26]     "pilotErrorCode": 0,
[2025-06-05 23:40:26]     "pilotErrorDiag": "",
[2025-06-05 23:40:26]  *** Listing of results directory ***
[2025-06-05 23:40:26] insgesamt 419884
[2025-06-05 23:40:26] -rw-r--r-- 1 boinc boinc    495897 Mai 28 11:38 pilot3.tar.gz
[2025-06-05 23:40:26] -rw-r--r-- 1 boinc boinc      5111 Mai 28 11:45 queuedata.json
[2025-06-05 23:40:26] -rwx------ 1 boinc boinc     37140 Mai 28 11:46 runpilot2-wrapper.sh
[2025-06-05 23:40:26] -rw-r--r-- 1 boinc boinc       100 Jun  5 17:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 23:40:26] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 17:53 run_atlas
[2025-06-05 23:40:26] -rw-r--r-- 1 boinc boinc       105 Jun  5 17:53 job.xml
[2025-06-05 23:40:26] -rw-r--r-- 1 boinc boinc      9253 Jun  5 17:54 init_data.xml
[2025-06-05 23:40:26] -rw-r--r-- 2 boinc boinc 222034226 Jun  5 17:54 EVNT.44871834._003213.pool.root.1
[2025-06-05 23:40:26] -rw-r--r-- 2 boinc boinc     15093 Jun  5 17:54 start_atlas.sh
[2025-06-05 23:40:26] drwxrwx--x 2 boinc boinc      4096 Jun  5 17:54 shared
[2025-06-05 23:40:26] -rw-r--r-- 2 boinc boinc    508873 Jun  5 17:54 input.tar.gz
[2025-06-05 23:40:26] -rw-r--r-- 1 boinc boinc         0 Jun  5 17:54 boinc_lockfile
[2025-06-05 23:40:26] -rw-r--r-- 1 boinc boinc      2559 Jun  5 17:56 pandaJob.out
[2025-06-05 23:40:26] -rw------- 1 boinc boinc    983229 Jun  5 18:46 agis_schedconf.cvmfs.json
[2025-06-05 23:40:26] drwx------ 4 boinc boinc      4096 Jun  5 18:46 pilot3
[2025-06-05 23:40:26] -rw------- 1 boinc boinc        95 Jun  5 23:39 pilot_heartbeat.json
[2025-06-05 23:40:26] -rw------- 1 boinc boinc 200157169 Jun  5 23:39 HITS.44871837._082322.pool.root.1
[2025-06-05 23:40:26] -rw-r--r-- 1 boinc boinc       531 Jun  5 23:39 boinc_task_state.xml
[2025-06-05 23:40:26] -rw------- 1 boinc boinc      1024 Jun  5 23:39 memory_monitor_summary.json
[2025-06-05 23:40:26] -rw------- 1 boinc boinc   1598969 Jun  5 23:40 agis_ddmendpoints.agis.ALL.json
[2025-06-05 23:40:26] -rw------- 1 boinc boinc    349214 Jun  5 23:40 log.44871837._082322.job.log.tgz.1
[2025-06-05 23:40:26] -rw------- 1 boinc boinc      7671 Jun  5 23:40 heartbeat.json
[2025-06-05 23:40:26] -rw-r--r-- 1 boinc boinc        28 Jun  5 23:40 wrapper_checkpoint.txt
[2025-06-05 23:40:26] -rw-r--r-- 1 boinc boinc      8192 Jun  5 23:40 boinc_mmap_file
[2025-06-05 23:40:26] -rw------- 1 boinc boinc      4742 Jun  5 23:40 pilotlog.txt
[2025-06-05 23:40:26] -rw------- 1 boinc boinc   1614427 Jun  5 23:40 log.44871837._082322.job.log.1
[2025-06-05 23:40:26] -rw------- 1 boinc boinc       357 Jun  5 23:40 output.list
[2025-06-05 23:40:26] -rw-r--r-- 1 boinc boinc       620 Jun  5 23:40 runtime_log
[2025-06-05 23:40:26] -rw------- 1 boinc boinc   1986560 Jun  5 23:40 result.tar.gz
[2025-06-05 23:40:26] -rw------- 1 boinc boinc       640 Jun  5 23:40 TPnLDm6XSe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0pbKDmNY5lbm.diag
[2025-06-05 23:40:26] -rw-r--r-- 1 boinc boinc      8688 Jun  5 23:40 runtime_log.err
[2025-06-05 23:40:26] -rw-r--r-- 1 boinc boinc     21391 Jun  5 23:40 stderr.txt
[2025-06-05 23:40:26] HITS file was successfully produced:
[2025-06-05 23:40:26] -rw------- 1 boinc boinc 200157169 Jun  5 23:39 shared/HITS.pool.root.1
[2025-06-05 23:40:26]  *** Contents of shared directory: ***
[2025-06-05 23:40:26] insgesamt 414764
[2025-06-05 23:40:26] -rw-r--r-- 2 boinc boinc 222034226 Jun  5 17:54 ATLAS.root_0
[2025-06-05 23:40:26] -rw-r--r-- 2 boinc boinc     15093 Jun  5 17:54 start_atlas.sh
[2025-06-05 23:40:26] -rw-r--r-- 2 boinc boinc    508873 Jun  5 17:54 input.tar.gz
[2025-06-05 23:40:26] -rw------- 1 boinc boinc 200157169 Jun  5 23:39 HITS.pool.root.1
[2025-06-05 23:40:26] -rw------- 1 boinc boinc   1986560 Jun  5 23:40 result.tar.gz
23:40:27 (890217): run_atlas exited; CPU time 34578.558818
23:40:27 (890217): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN